Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0011780

Physical Location & Seq

Genomic Coordinates Forward (+)

28266574 .. 28272809

Gene Structure 6236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1131600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGGACGATCCCACGGCGCCACCGAGAACCCCATCGTCGTCTTCCTCCCAGCTCAATACGCCTCCAACAATGCTCCGCACTCCTCAGGCCCTCCAATCGCTAACCCCATCTCGGCACATCGACCGCCTGATCAACTTCAACCACCACCAATCGCCGTCCAGGACCATCTACTCCGATAGGTTCATCCCCAGTAGATCCGGCTCCAACTTCCCCCTCTTCGACATCTCTAATACTCCATCCGAGGGCCGCGATGACTCGTCAAGCGCCTACGGCACTCTCCTACGCGCTGCCCTCTTTGGCCCTGACGCCCGTGGCGTCGTCCCTCCGGCGACGCCTGAGAAAAGGAGCGCAATTCAGATGAACCCGCCTAGTCCCAACATCTTCCGGTTCAAGACCGAGACTCGCCCGTCAATGCACTCGCTTTCCCCTTTTGGGTTCGACGATGTGGTCACTGGGGCTCACCATAGCCCGGTCAAGGCTCCTCGGAAGGTCCCTCGGTCGCCTTACAAGGTTTTGGATGCACCTGCTTTGCAAGATGATTTCTATCTGAATCTTGTCGACTGGTCTTCGCACAATGTACTTGCCGTTGGGTTGGGAAATTGTGTTTATTTATGGAATGCTTGTAGTAGCAAGGTAACTAAGTTATGTGACTTGGGGATTGATGATAGTGTCTGTTCCGTTGGCTGGGCTCAACGTGGAACTCATCTTGCGGTTGGAACTAGCAATGGAAAAGTCCAAATTTGGGATGCATCACGCTGTAGGAGGGTAAGAACTATGGAGGGCCATCGACTACGCATTGGGGCCTTAGCCTGGAGTTCATCTATGCTGTCTTCTGGTAGCCGGGACAAGACTATTCTTCAACGTGATATTCGTGCTCAGGAAGATTTTGTTAGCAAACTTTCCGGACACAAGTCAGAGGTTTGCGGACTGAAGTGGTCTTATGATAACCGTGAGCTGGCATCAGGCGGGAATGATAATAGGCTTTTTGTTTGGAATCAACATTCAACTCAACCTGTGCTCAAATACTGTGAGCATACTGCAGCTGTGAAAGCTATTGCATGGTCTCCCCATCTTCATGGGCTTCTTGCGTCTGGGGGAGGAACTGCAGACCGATGTATTCGCTTCTGGAATACAACCACCAACTCGCATTTGAGCTGCATGGACACTGGAAGTCAGGTATGCAATCTTGTGTGGTCGAAAAATGTCAATGAACTAGTCAGCACCCATGGCTACTCCCAAAATCAGATAATAGTTTGGAGATATCCCACCATGTCAAAGCTTGCAACTCTTACGGGCCATTCATACAGAGTTCTTTATCTTGCCATCTCGCCTGATGGACAGACAATTGTTACTGGAGCAGGAGATGAAACACTAAGATTTTGGAACGTGTTTCCTTCCCCTAAGTCCCAGAACACAGAAAGTGAAATTGGAGCATCATCTCTTGGAAGAACCATCATCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009653 GO:0009825 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010026 GO:0010073 GO:0010074 GO:0010090 GO:0010091 GO:0010492 GO:0010556 GO:0010557 GO:0010564 GO:0010604 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019827 GO:0022402 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032535 GO:0032875 GO:0032877 GO:0032989 GO:0034641 GO:0034645 GO:0040007 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045740 GO:0045787 GO:0045935 GO:0046483 GO:0048468 GO:0048507 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090068 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0098727 GO:1901360 GO:1901576 GO:2000105 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04120 ko04914 map04110 map04111 map04120 map04914

Pfam Domains

Protein Families

ANAPC4_WD40 WD40

Protein Analysis

488

Amino Acids

53.66

Weight (kDa)

9.27

Isoelectric Point (pI)

49.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	172 - 461	1.2e-127	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	184 - 273	1.5e-08	WDHD1 first WD40 domain
WDR55	PF24796	185 - 332	6.2e-06	WDR55
Beta-prop_EML_2	PF23414	190 - 355	3.3e-17	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st	PF23389	192 - 285	6.4e-13	WDR19 first beta-propeller
Beta-prop_WDR3_1st	PF25173	193 - 294	2.6e-13	WDR3 first beta-propeller domain
WDR55	PF24796	218 - 466	5.3e-11	WDR55
Beta-prop_WDR5	PF25175	221 - 387	3.5e-24	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	222 - 294	1.5e-09	THOC3 beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	224 - 462	2.2e-15	MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd	PF25047	224 - 396	5.5e-11	TEP-1 second beta-propeller
WD40_Prp19	PF24814	274 - 462	2.3e-17	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	291 - 360	2.1e-06	WDHD1 first WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	292 - 383	4.9e-10	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	295 - 407	1.8e-14	WDR3 first beta-propeller domain
WD40	PF00400	296 - 332	4.3e-07	WD domain, G-beta repeat
WD40_Gbeta	PF25391	298 - 466	2.4e-12	G protein beta WD-40 repeat protein
Beta-prop_Aladin	PF25460	300 - 463	2.3e-08	Aladin seven-bladed propeller
Beta-prop_THOC3	PF25174	303 - 409	7.7e-19	THOC3 beta-propeller domain
Beta-prop_EML	PF23409	342 - 464	2.7e-10	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	345 - 463	2.1e-06	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR5	PF25175	345 - 463	3.5e-13	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	368 - 464	5.4e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd	PF25172	369 - 471	2.3e-08	WDR3 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	391 - 463	2.3e-08	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	412 - 463	6.1e-08	THOC3 beta-propeller domain
WD40	PF00400	426 - 462	1.3e-07	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011780)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11920 AT4G22910
fragaria_vesca	FvH4_5g01220 FvH4_5g01220
malus_domestica	MD00G1131600.v1.1 MD04G1070400.v1.1 MD11G1180200.v1.1 MD13G1123600.v1.1
prunus_persica	Prupe.5G087300_v2.0.a1
pyrus_communis	pycom04g06380 pycom06g06850
rosa_chinensis	RchiOBHm_Chr7g0199871
rosa_laevigata	RLG00000003764
rosa_multiflora	Rmu_sc0002748.1_g000015
rosa_roxburghii	Rroxscaffold_3G00256420
rosa_rugosa	Rorug07G0056700
rosa_samantha	Rh7AG181900 Rh7CG191500
rosa_wichuraiana	Rw7G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	532
AasI	GACNNNNNNGTC	2 cut(s)	406, 446
Acc36I	ACCTGC	1 cut(s)	532
AccB1I	GGYRCC	1 cut(s)	16
AccI	GTMKAC	1 cut(s)	558
AccII	CGCG	2 cut(s)	249, 285
AccIII	TCCGGA	1 cut(s)	902
AciI	CCGC	7 cut(s)	76, 124, 247, 365, 710, 924, 966
AclWI	GGATC	2 cut(s)	2, 189
AcsI	RAATTY	1 cut(s)	738
AcuI	CTGAAG	1 cut(s)	950
AcyI	GRCGYC	4 cut(s)	17, 306, 315, 332
AfaI	GTAC	1 cut(s)	579
AflIII	ACRYGT	1 cut(s)	1386
AgsI	TTSAA	4 cut(s)	139, 391, 860, 1005
AhlI	ACTAGT	1 cut(s)	1213
AjnI	CCWGG	2 cut(s)	158, 809
AjuI	GAANNNNNNNTTGG	2 cut(s)	1410, 1442
AluBI	AGCT	6 cut(s)	52, 955, 1043, 1052, 1155, 1279
AluI	AGCT	6 cut(s)	52, 955, 1043, 1052, 1155, 1279
Alw21I	GWGCWC	2 cut(s)	877, 1020
Alw26I	GTCTC	2 cut(s)	392, 1068
AlwI	GGATC	2 cut(s)	2, 189
Aor13HI	TCCGGA	1 cut(s)	902
AoxI	GGCC	6 cut(s)	87, 244, 298, 781, 801, 1294
ApeKI	GCWGC	3 cut(s)	287, 1040, 1155
ApoI	RAATTY	1 cut(s)	738
AspLEI	GCGC	4 cut(s)	19, 266, 287, 350
AspS9I	GGNCC	8 cut(s)	88, 162, 244, 299, 490, 781, 801, 1294
AsuC2I	CCSGG	2 cut(s)	470, 842
AsuHPI	GGTGA	1 cut(s)	452
AvaII	GGWCC	2 cut(s)	162, 490
AxyI	CCTNAGG	1 cut(s)	84
BanI	GGYRCC	1 cut(s)	16
BanII	GRGCYC	2 cut(s)	460, 691
BbsI	GAAGAC	3 cut(s)	33, 558, 822
Bbv12I	GWGCWC	2 cut(s)	877, 1020
BbvI	GCAGC	3 cut(s)	274, 1052, 1142
BccI	CCATC	9 cut(s)	40, 115, 173, 244, 792, 1077, 1328, 1331, 1460
BceAI	ACGGC	4 cut(s)	30, 139, 286, 569
BciT130I	CCWGG	2 cut(s)	160, 811
BclI	TGATCA	1 cut(s)	129
BcnI	CCSGG	2 cut(s)	470, 842
BcoDI	GTCTC	2 cut(s)	392, 1068
BcuI	ACTAGT	1 cut(s)	1213
BfaI	CTAG	3 cut(s)	369, 720, 1214
BfmI	CTRYAG	3 cut(s)	757, 1038, 1104
BfoI	RGCGCY	2 cut(s)	20, 267
BfuAI	ACCTGC	1 cut(s)	532
BisI	GCNGC	4 cut(s)	247, 288, 1041, 1156
BlsI	GCNGC	4 cut(s)	248, 289, 1042, 1157
Bme1390I	CCNGG	4 cut(s)	160, 470, 811, 842
Bme18I	GGWCC	2 cut(s)	162, 490
BmgT120I	GGNCC	8 cut(s)	88, 162, 244, 299, 490, 781, 801, 1294
BmiI	GGNNCC	5 cut(s)	18, 202, 480, 492, 802
BmrFI	CCNGG	4 cut(s)	160, 470, 811, 842
BmrI	ACTGGG	2 cut(s)	183, 462
BmsI	GCATC	5 cut(s)	508, 736, 758, 968, 1442
BmuI	ACTGGG	2 cut(s)	183, 462
BoxI	GACNNNNGTC	1 cut(s)	910
BpiI	GAAGAC	3 cut(s)	33, 558, 822
BpmI	CTGGAG	2 cut(s)	832, 1374
Bpu10I	CCTNAGC	2 cut(s)	805, 876
BpuMI	CCSGG	2 cut(s)	470, 842
BsaBI	GATNNNNATC	1 cut(s)	543
BsaHI	GRCGYC	4 cut(s)	17, 306, 315, 332
BsaI	GGTCTC	1 cut(s)	1068
BsaJI	CCNNGG	6 cut(s)	12, 240, 310, 482, 494, 1225
BsaWI	WCCGGW	3 cut(s)	384, 902, 1458
Bse1I	ACTGG	5 cut(s)	189, 457, 566, 1171, 1357
Bse21I	CCTNAGG	1 cut(s)	84
Bse3DI	GCAATG	1 cut(s)	730
Bse8I	GATNNNNATC	1 cut(s)	543
BseAI	TCCGGA	1 cut(s)	902
BseBI	CCWGG	2 cut(s)	160, 811
BseDI	CCNNGG	6 cut(s)	12, 240, 310, 482, 494, 1225
BseGI	GGATG	5 cut(s)	183, 236, 523, 751, 1455
BseJI	GATNNNNATC	1 cut(s)	543
BseMI	GCAATG	1 cut(s)	730
BseMII	CTCAG	3 cut(s)	98, 327, 890
BseNI	ACTGG	5 cut(s)	189, 457, 566, 1171, 1357
BseRI	GAGGAG	2 cut(s)	72, 471
BseXI	GCAGC	3 cut(s)	274, 1052, 1142
BseYI	CCCAGC	2 cut(s)	48, 684
Bsh1236I	CGCG	2 cut(s)	249, 285
Bsh1285I	CGRYCG	2 cut(s)	124, 500
BshFI	GGCC	6 cut(s)	89, 246, 300, 783, 803, 1296
BshNI	GGYRCC	1 cut(s)	16
BsiEI	CGRYCG	2 cut(s)	124, 500
BsiHKAI	GWGCWC	2 cut(s)	877, 1020
BsiSI	CCGG	7 cut(s)	198, 326, 385, 470, 841, 903, 1459
BslFI	GGGAC	5 cut(s)	305, 357, 476, 857, 1390
BsmAI	GTCTC	2 cut(s)	392, 1068
BsmFI	GGGAC	5 cut(s)	305, 357, 476, 857, 1390
BsmI	GAATGC	1 cut(s)	622
BsnI	GGCC	6 cut(s)	89, 246, 300, 783, 803, 1296
Bso31I	GGTCTC	1 cut(s)	1068
Bsp1286I	GDGCHC	4 cut(s)	460, 691, 877, 1020
Bsp13I	TCCGGA	1 cut(s)	902
Bsp143I	GATC	3 cut(s)	7, 129, 194
Bsp19I	CCATGG	1 cut(s)	1225
BspACI	CCGC	7 cut(s)	76, 124, 247, 365, 710, 924, 966
BspANI	GGCC	6 cut(s)	89, 246, 300, 783, 803, 1296
BspCNI	CTCAG	3 cut(s)	97, 328, 889
BspEI	TCCGGA	1 cut(s)	902
BspFNI	CGCG	2 cut(s)	249, 285
BspLI	GGNNCC	5 cut(s)	18, 202, 480, 492, 802
BspMAI	CTGCAG	2 cut(s)	1042, 1108
BspMI	ACCTGC	1 cut(s)	532
BspPI	GGATC	2 cut(s)	2, 189
BspT107I	GGYRCC	1 cut(s)	16
BspTNI	GGTCTC	1 cut(s)	1068
BsrDI	GCAATG	1 cut(s)	730
BsrI	ACTGG	5 cut(s)	189, 457, 566, 1171, 1357
BssECI	CCNNGG	6 cut(s)	12, 240, 310, 482, 494, 1225
BssMI	GATC	3 cut(s)	7, 129, 194
BssNI	GRCGYC	4 cut(s)	17, 306, 315, 332
BssT1I	CCWWGG	1 cut(s)	1225
Bst2UI	CCWGG	2 cut(s)	160, 811
Bst4CI	ACNGT	2 cut(s)	950, 1028
Bst6I	CTCTTC	1 cut(s)	221
BstACI	GRCGYC	4 cut(s)	17, 306, 315, 332
BstC8I	GCNNGC	2 cut(s)	957, 1281
BstDEI	CTNAG	7 cut(s)	84, 336, 639, 805, 876, 1373, 1401
BstDSI	CCRYGG	3 cut(s)	12, 310, 1225
BstF5I	GGATG	5 cut(s)	183, 236, 523, 751, 1455
BstFNI	CGCG	2 cut(s)	249, 285
BstH2I	RGCGCY	2 cut(s)	20, 267
BstHHI	GCGC	4 cut(s)	19, 266, 287, 350
BstKTI	GATC	3 cut(s)	10, 132, 197
BstMAI	GTCTC	2 cut(s)	392, 1068
BstMBI	GATC	3 cut(s)	7, 129, 194
BstMCI	CGRYCG	2 cut(s)	124, 500
BstMWI	GCNNNNNNNGC	4 cut(s)	58, 270, 1049, 1227
BstNI	CCWGG	2 cut(s)	160, 811
BstPAI	GACNNNNGTC	1 cut(s)	910
BstSCI	CCNGG	4 cut(s)	158, 468, 809, 840
BstSFI	CTRYAG	3 cut(s)	757, 1038, 1104
BstUI	CGCG	2 cut(s)	249, 285
BstV1I	GCAGC	3 cut(s)	274, 1052, 1142
BstV2I	GAAGAC	3 cut(s)	33, 558, 822
BstX2I	RGATCY	1 cut(s)	194
BstXI	CCANNNNNNTGG	1 cut(s)	1076
BstYI	RGATCY	1 cut(s)	194
Bsu36I	CCTNAGG	1 cut(s)	84
BsuRI	GGCC	6 cut(s)	89, 246, 300, 783, 803, 1296
BtgI	CCRYGG	3 cut(s)	12, 310, 1225
BtgZI	GCGATG	1 cut(s)	264
BtsCI	GGATG	5 cut(s)	183, 236, 523, 751, 1455
BtsIMutI	CAGTG	2 cut(s)	450, 1164
BveI	ACCTGC	1 cut(s)	532
Cac8I	GCNNGC	2 cut(s)	957, 1281
CfoI	GCGC	4 cut(s)	19, 266, 287, 350
Cfr13I	GGNCC	8 cut(s)	88, 162, 244, 299, 490, 781, 801, 1294
CseI	GACGC	4 cut(s)	304, 314, 340, 1077
Csp6I	GTAC	1 cut(s)	578
CviAII	CATG	5 cut(s)	1059, 1076, 1159, 1226, 1270
CviQI	GTAC	1 cut(s)	578
DdeI	CTNAG	7 cut(s)	84, 336, 639, 805, 876, 1373, 1401
DinI	GGCGCC	1 cut(s)	18
DpnI	GATC	3 cut(s)	9, 131, 196
DpnII	GATC	3 cut(s)	7, 129, 194
DrdI	GACNNNNNNGTC	2 cut(s)	406, 446
DseDI	GACNNNNNNGTC	2 cut(s)	406, 446
Eam1104I	CTCTTC	1 cut(s)	221
EarI	CTCTTC	1 cut(s)	221
Eco130I	CCWWGG	1 cut(s)	1225
Eco24I	GRGCYC	2 cut(s)	460, 691
Eco31I	GGTCTC	1 cut(s)	1068
Eco32I	GATATC	1 cut(s)	1262
Eco47I	GGWCC	2 cut(s)	162, 490
Eco57I	CTGAAG	1 cut(s)	950
Eco81I	CCTNAGG	1 cut(s)	84
EcoO109I	RGGNCCY	3 cut(s)	88, 490, 801
EcoRII	CCWGG	2 cut(s)	158, 809
EcoRV	GATATC	1 cut(s)	1262
EcoT14I	CCWWGG	1 cut(s)	1225
EcoT22I	ATGCAT	1 cut(s)	751
EcoT38I	GRGCYC	2 cut(s)	460, 691
EgeI	GGCGCC	1 cut(s)	18
EheI	GGCGCC	1 cut(s)	18
ErhI	CCWWGG	1 cut(s)	1225
FaeI	CATG	5 cut(s)	1062, 1079, 1162, 1229, 1273
FaqI	GGGAC	5 cut(s)	305, 357, 476, 857, 1390
FatI	CATG	5 cut(s)	1058, 1075, 1158, 1225, 1269
FauI	CCCGC	2 cut(s)	372, 959
FbaI	TGATCA	1 cut(s)	129
FblI	GTMKAC	1 cut(s)	558
Fnu4HI	GCNGC	4 cut(s)	247, 288, 1041, 1156
FokI	GGATG	5 cut(s)	170, 223, 530, 758, 1442
FriOI	GRGCYC	2 cut(s)	460, 691
Fsp4HI	GCNGC	4 cut(s)	247, 288, 1041, 1156
FspBI	CTAG	3 cut(s)	369, 720, 1214
GlaI	GCGC	4 cut(s)	18, 265, 286, 349
GluI	GCNGC	4 cut(s)	247, 288, 1041, 1156
GsaI	CCCAGC	2 cut(s)	52, 688
GsuI	CTGGAG	2 cut(s)	832, 1374
HaeII	RGCGCY	2 cut(s)	20, 267
HaeIII	GGCC	6 cut(s)	89, 246, 300, 783, 803, 1296
HapII	CCGG	7 cut(s)	198, 326, 385, 470, 841, 903, 1459
HgaI	GACGC	4 cut(s)	304, 314, 340, 1077
HhaI	GCGC	4 cut(s)	19, 266, 287, 350
Hin1I	GRCGYC	4 cut(s)	17, 306, 315, 332
Hin1II	CATG	5 cut(s)	1062, 1079, 1162, 1229, 1273
Hin6I	GCGC	4 cut(s)	17, 264, 285, 348
HinP1I	GCGC	4 cut(s)	17, 264, 285, 348
HincII	GTYRAC	1 cut(s)	559
HindII	GTYRAC	1 cut(s)	559
HindIII	AAGCTT	1 cut(s)	1277
HinfI	GANTC	4 cut(s)	254, 400, 550, 994
HpaII	CCGG	7 cut(s)	198, 326, 385, 470, 841, 903, 1459
HphI	GGTGA	1 cut(s)	452
Hpy166II	GTNNAC	1 cut(s)	559
Hpy188I	TCNGA	7 cut(s)	175, 241, 357, 486, 549, 916, 1245
Hpy188III	TCNNGA	4 cut(s)	391, 878, 903, 1126
Hpy8I	GTNNAC	1 cut(s)	559
Hpy99I	CGWCG	4 cut(s)	40, 320, 334, 443
HpyAV	CCTTC	2 cut(s)	481, 1404
HpyCH4III	ACNGT	2 cut(s)	950, 1028
HpyCH4IV	ACGT	3 cut(s)	694, 862, 1386
HpyF10VI	GCNNNNNNNGC	4 cut(s)	58, 270, 1049, 1227
HpyF3I	CTNAG	7 cut(s)	84, 336, 639, 805, 876, 1373, 1401
HpySE526I	ACGT	3 cut(s)	694, 862, 1386
Hsp92I	GRCGYC	4 cut(s)	17, 306, 315, 332
Hsp92II	CATG	5 cut(s)	1062, 1079, 1162, 1229, 1273
HspAI	GCGC	4 cut(s)	17, 264, 285, 348
KasI	GGCGCC	1 cut(s)	16
Kpn2I	TCCGGA	1 cut(s)	902
Ksp22I	TGATCA	1 cut(s)	129
Kzo9I	GATC	3 cut(s)	7, 129, 194
LmnI	GCTCC	6 cut(s)	78, 206, 345, 484, 1355, 1430
Lsp1109I	GCAGC	3 cut(s)	274, 1052, 1142
LweI	GCATC	5 cut(s)	508, 736, 758, 968, 1442
MaeI	CTAG	3 cut(s)	369, 720, 1214
MaeII	ACGT	3 cut(s)	694, 862, 1386
MaeIII	GTNAC	4 cut(s)	448, 634, 647, 1348
MalI	GATC	3 cut(s)	9, 131, 196
MboI	GATC	3 cut(s)	7, 129, 194
MboII	GAAGA	9 cut(s)	33, 208, 373, 558, 822, 848, 893, 1064, 1458
MfeI	CAATTG	1 cut(s)	1344
MflI	RGATCY	1 cut(s)	194
MhlI	GDGCHC	4 cut(s)	460, 691, 877, 1020
MluCI	AATT	5 cut(s)	351, 598, 738, 1344, 1425
Mly113I	GGCGCC	1 cut(s)	17
MlyI	GAGTC	2 cut(s)	248, 394
MmeI	TCCRAC	3 cut(s)	89, 228, 694
Mph1103I	ATGCAT	1 cut(s)	751
MroI	TCCGGA	1 cut(s)	902
MslI	CAYNNNNRTG	1 cut(s)	1074
MspA1I	CMGCKG	1 cut(s)	1043
MspI	CCGG	7 cut(s)	198, 326, 385, 470, 841, 903, 1459
MspR9I	CCNGG	4 cut(s)	160, 470, 811, 842
MunI	CAATTG	1 cut(s)	1344
Mva1269I	GAATGC	1 cut(s)	622
MvaI	CCWGG	2 cut(s)	160, 811
MvnI	CGCG	2 cut(s)	249, 285
MwoI	GCNNNNNNNGC	4 cut(s)	58, 270, 1049, 1227
NarI	GGCGCC	1 cut(s)	17
NciI	CCSGG	2 cut(s)	470, 842
NcoI	CCATGG	1 cut(s)	1225
NdeII	GATC	3 cut(s)	7, 129, 194
NlaIII	CATG	5 cut(s)	1062, 1079, 1162, 1229, 1273
NlaIV	GGNNCC	5 cut(s)	18, 202, 480, 492, 802
NmeAIII	GCCGAG	1 cut(s)	91
NmuCI	GTSAC	2 cut(s)	448, 647
NsiI	ATGCAT	1 cut(s)	751
PaqCI	CACCTGC	1 cut(s)	532
PcsI	WCGNNNNNNNCGW	3 cut(s)	20, 312, 868
PctI	GAATGC	1 cut(s)	622
PfeI	GAWTC	2 cut(s)	550, 994
PfoI	TCCNGGA	1 cut(s)	158
PkrI	GCNGC	4 cut(s)	248, 289, 1042, 1157
PleI	GAGTC	2 cut(s)	248, 394
PluTI	GGCGCC	1 cut(s)	20
PpsI	GAGTC	2 cut(s)	248, 394
PpuMI	RGGWCCY	1 cut(s)	490
PshAI	GACNNNNGTC	1 cut(s)	910
Psp5II	RGGWCCY	1 cut(s)	490
Psp6I	CCWGG	2 cut(s)	158, 809
PspFI	CCCAGC	2 cut(s)	48, 684
PspGI	CCWGG	2 cut(s)	158, 809
PspN4I	GGNNCC	5 cut(s)	18, 202, 480, 492, 802
PspPI	GGNCC	8 cut(s)	88, 162, 244, 299, 490, 781, 801, 1294
PspPPI	RGGWCCY	1 cut(s)	490
PstI	CTGCAG	2 cut(s)	1042, 1108
PsuI	RGATCY	1 cut(s)	194
PvuII	CAGCTG	1 cut(s)	1043
RsaI	GTAC	1 cut(s)	579
RsaNI	GTAC	1 cut(s)	578
RseI	CAYNNNNRTG	1 cut(s)	1074
SalI	GTCGAC	1 cut(s)	557
SatI	GCNGC	4 cut(s)	247, 288, 1041, 1156
Sau3AI	GATC	3 cut(s)	7, 129, 194
Sau96I	GGNCC	8 cut(s)	88, 162, 244, 299, 490, 781, 801, 1294
SchI	GAGTC	2 cut(s)	248, 394
ScrFI	CCNGG	4 cut(s)	160, 470, 811, 842
SduI	GDGCHC	4 cut(s)	460, 691, 877, 1020
SfaNI	GCATC	5 cut(s)	508, 736, 758, 968, 1442
SfcI	CTRYAG	3 cut(s)	757, 1038, 1104
SfoI	GGCGCC	1 cut(s)	18
SinI	GGWCC	2 cut(s)	162, 490
SmiMI	CAYNNNNRTG	1 cut(s)	1074
SpeI	ACTAGT	1 cut(s)	1213
Sse9I	AATT	5 cut(s)	351, 598, 738, 1344, 1425
SsiI	CCGC	7 cut(s)	76, 124, 247, 365, 710, 924, 966
SspDI	GGCGCC	1 cut(s)	16
SspMI	CTAG	3 cut(s)	369, 720, 1214
StyD4I	CCNGG	4 cut(s)	158, 468, 809, 840
StyI	CCWWGG	1 cut(s)	1225
TaaI	ACNGT	2 cut(s)	950, 1028
TaiI	ACGT	3 cut(s)	697, 865, 1389
TaqI	TCGA	6 cut(s)	120, 219, 438, 558, 787, 1196
TaqII	GACCGA	3 cut(s)	410, 486, 1125
TasI	AATT	5 cut(s)	351, 598, 738, 1344, 1425
TatI	WGTACW	1 cut(s)	577
TauI	GCSGC	1 cut(s)	249
TfiI	GAWTC	2 cut(s)	550, 994
TscAI	CASTG	2 cut(s)	457, 1171
TseFI	GTSAC	2 cut(s)	448, 647
TseI	GCWGC	3 cut(s)	287, 1040, 1155
Tsp45I	GTSAC	2 cut(s)	448, 647
TspDTI	ATGAA	7 cut(s)	172, 374, 807, 1064, 1224, 1290, 1380
TspGWI	ACGGA	1 cut(s)	667
TspRI	CASTG	2 cut(s)	457, 1171
VpaK11BI	GGWCC	2 cut(s)	162, 490
XapI	RAATTY	1 cut(s)	738
XmiI	GTMKAC	1 cut(s)	558
XspI	CTAG	3 cut(s)	369, 720, 1214
Zsp2I	ATGCAT	1 cut(s)	751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.