Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011780

Physical Location & Seq

Genomic Coordinates Reverse (-)

17864374 .. 17868917

Gene Structure 4544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17886

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGACGATCCTATGCTATCTTCTTCTTCTTCTTCTACGCAGCTCAATCAGCCGCCGCCGACGCTTCCGCGTACCCCTATGGCGGTCCAGCCGGAGACGCCGGCCCGGCACATCGAGCGAATGCTGAACGTCAACCACCACCACCGATCGCCGTCGCGGACCATCTACTCCGATAGGTTCATACCCAGCAGATCCGGCTCTAACTTTGGTTTGTTCGACATCAAATCGCCGACGAATTCTCAGTGCGACGAGACCTCCAGCGCCTACACCACGCTCCTACGCGCCGCCCTCTTCGGCCCCGACACCGCCGGCGTGATTCCTCCGGCGACCCCCGATCGGCGGGGGCTGATGAACCCGCCGAACCAGAATATATTCCGGTTCAAGAGCGAGACGCGGCGGTCCATGCACTCGCTGCTGCCGTTTGGGTTTGACGATGACGTGGTCACCGGAGTTCATCATAGTCCGGTGAAGACCCCCAGGAAGGTCCCCAGGTCGCCGTATAAGGTTTTGGATGCACCGGCTTTGCAAGACGATTTCTATCTGAATCTGGTGGATTGGTCTTCGCATAATGTATTGGCTGTGGGGTTGGGGAACTGTGTTTATTTGTGGAATGCTTGTAGTAGTAAGGTAACTAAGTTATGCGATTTGGGGACTGATGATAGTGTCTGTTCGGTTGGCTGGGCGCAGCGGGGAACTCATCTTGCTGTGGGAACTGGCAATGGGAAAGTCCAAATTTGGGATGCATCTCGCTGTAAGAGGGTAAGAACTATGGAGGGCCATCGTCTACGTATTGGGGCATTGGCCTGGAGTTCATCCATGTTGTCTTCTGGTAGCCGTGACAAGAGTATTCTTCAACGGGATATACGCGCTCAGGAAGATTTCGTTAGCAAACTTTCTGGACATAAGTCAGAGGTTTGTGGACTGAAGTGGTCTTATGACAACCGTGAGTTGGCATCAGGCGGGAATGATAATAGACTTTTTGTTTGGAATCAACATTCAACTCAACCCGTGCTGAAATACTGTGAGCATACTGCTGCCGTGAAAGCTATTGCATGGTCCCCCCATCTTCATGGACTTCTTGCATCTGGGGGAGGAACTGCAGACCGATGTATCCGTTTCTGGAATACAACCACTAACTCTCACTTGAGCTGCATGGACACTGGAAGTCAGGTTTGCAATCTTGTGTGGTCCAAAAATGTCAATGAGCTCGTCAGCACGCACGGGTACTCCCAAAATCAGATAATAGTTTGGAGATATCCTACGATGTCCAAGCTGGCAACTCTCACGGGCCATACATATAGAGTTCTTTATCTTGCCATCTCACCTGACGGACAGACAATTGTCACAGGAGCAGGAGATGAAACACTTAGGTTTTGGAATGTGTTTCCTTCCCCTAAATCTCAGAATACGGGAAGTGAAATCGGAGCATCATGTCTAGGCAGAACCATCATCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008361 GO:0009058 GO:0009059 GO:0009653 GO:0009825 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010026 GO:0010073 GO:0010074 GO:0010090 GO:0010091 GO:0010492 GO:0010556 GO:0010557 GO:0010564 GO:0010604 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019827 GO:0022402 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032535 GO:0032875 GO:0032877 GO:0032989 GO:0034641 GO:0034645 GO:0040007 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045740 GO:0045787 GO:0045935 GO:0046483 GO:0048468 GO:0048507 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090068 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0098727 GO:1901360 GO:1901576 GO:2000105 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04120 ko04914 map04110 map04111 map04120 map04914

Pfam Domains

Protein Families

ANAPC4_WD40 WD40

Protein Analysis

485

Amino Acids

53.58

Weight (kDa)

9.18

Isoelectric Point (pI)

44.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	170 - 459	8.1e-128	CDC20/Fizzy WD40 domain
WD40_WDHD1_1st	PF24817	182 - 271	2.1e-08	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	188 - 353	4.9e-17	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st	PF23389	190 - 283	4.5e-12	WDR19 first beta-propeller
Beta-prop_WDR3_1st	PF25173	191 - 292	2.9e-13	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	199 - 283	2.9e-09	THOC3 beta-propeller domain
ANAPC4_WD40	PF12894	210 - 271	9.3e-06	Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_WDR5	PF25175	218 - 399	1.5e-23	WDR5 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	218 - 283	6.1e-06	WDR3 second beta-propeller domain
WDR55	PF24796	218 - 464	2.9e-11	WDR55
WD40_MABP1-WDR62_2nd	PF24782	220 - 460	1.7e-14	MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd	PF25047	222 - 394	2.6e-10	TEP-1 second beta-propeller
WD40_Prp19	PF24814	272 - 460	3.4e-17	Prp19 WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	289 - 381	4.2e-10	CAF1B/HIR1 beta-propeller domain
WD40_WDHD1_1st	PF24817	290 - 358	2.5e-06	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	293 - 405	1.4e-14	WDR3 first beta-propeller domain
WD40	PF00400	294 - 330	4.3e-07	WD domain, G-beta repeat
WD40_Gbeta	PF25391	296 - 465	1.9e-12	G protein beta WD-40 repeat protein
Beta-prop_THOC3	PF25174	301 - 407	7.7e-19	THOC3 beta-propeller domain
Beta-prop_Aladin	PF25460	301 - 461	2.5e-08	Aladin seven-bladed propeller
Beta-prop_EML	PF23409	340 - 462	2.6e-10	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR5	PF25175	342 - 461	1.1e-13	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	343 - 461	1.6e-06	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	367 - 464	2.5e-08	WDR3 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	390 - 461	2.4e-08	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	410 - 461	2.6e-08	THOC3 beta-propeller domain
WD40	PF00400	424 - 460	1e-07	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011780)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11920 AT4G22910
fragaria_vesca	FvH4_5g01220 FvH4_5g01220
malus_domestica	MD00G1131600.v1.1 MD04G1070400.v1.1 MD11G1180200.v1.1 MD13G1123600.v1.1
prunus_persica	Prupe.5G087300_v2.0.a1
pyrus_communis	pycom04g06380 pycom06g06850
rosa_chinensis	RchiOBHm_Chr7g0199871
rosa_laevigata	RLG00000003764
rosa_multiflora	Rmu_sc0002748.1_g000015
rosa_roxburghii	Rroxscaffold_3G00256420
rosa_rugosa	Rorug07G0056700
rosa_samantha	Rh7AG181900 Rh7CG191500
rosa_wichuraiana	Rw7G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	397
AccI	GTMKAC	1 cut(s)	784
AccII	CGCG	5 cut(s)	70, 157, 282, 394, 867
AclWI	GGATC	2 cut(s)	2, 186
AcsI	RAATTY	2 cut(s)	235, 732
AcuI	CTGAAG	1 cut(s)	944
AcyI	GRCGYC	1 cut(s)	98
AfaI	GTAC	2 cut(s)	73, 1226
AfiI	CCNNNNNNNGG	7 cut(s)	82, 336, 339, 481, 736, 949, 1452
AgsI	TTSAA	3 cut(s)	382, 854, 999
AjiI	CACGTC	1 cut(s)	439
AjnI	CCWGG	3 cut(s)	476, 488, 803
AluBI	AGCT	5 cut(s)	43, 1046, 1149, 1207, 1273
AluI	AGCT	5 cut(s)	43, 1046, 1149, 1207, 1273
Alw21I	GWGCWC	1 cut(s)	1209
Alw26I	GTCTC	3 cut(s)	89, 245, 383
AlwI	GGATC	2 cut(s)	2, 186
AoxI	GGCC	5 cut(s)	102, 295, 775, 801, 1288
ApeKI	GCWGC	6 cut(s)	40, 412, 415, 685, 1034, 1149
ApoI	RAATTY	2 cut(s)	235, 732
ArsI	GACNNNNNNTTYG	2 cut(s)	966, 998
Asp700I	GAANNNNTTC	1 cut(s)	371
AspLEI	GCGC	4 cut(s)	263, 284, 685, 869
AsuC2I	CCSGG	1 cut(s)	106
AsuHPI	GGTGA	3 cut(s)	436, 478, 1314
AvaII	GGWCC	6 cut(s)	85, 159, 399, 484, 1056, 1188
BaeI	ACNNNNGTAYC	2 cut(s)	1093, 1126
BanII	GRGCYC	1 cut(s)	1209
BbsI	GAAGAC	3 cut(s)	476, 552, 816
Bbv12I	GWGCWC	1 cut(s)	1209
BbvI	GCAGC	6 cut(s)	52, 399, 402, 697, 1021, 1136
BccI	CCATC	5 cut(s)	170, 786, 1071, 1325, 1454
BceAI	ACGGC	5 cut(s)	136, 403, 481, 819, 1022
BciT130I	CCWGG	3 cut(s)	478, 490, 805
BciVI	GTATCC	1 cut(s)	1121
BcnI	CCSGG	1 cut(s)	106
BcoDI	GTCTC	3 cut(s)	89, 245, 383
BfaI	CTAG	1 cut(s)	1436
BfmI	CTRYAG	1 cut(s)	1098
BfoI	RGCGCY	1 cut(s)	264
BfuI	GTATCC	1 cut(s)	1121
BglI	GCCNNNNNGGC	1 cut(s)	106
Bme1390I	CCNGG	4 cut(s)	106, 478, 490, 805
Bme18I	GGWCC	6 cut(s)	85, 159, 399, 484, 1056, 1188
BmgBI	CACGTC	1 cut(s)	439
BmiI	GGNNCC	3 cut(s)	298, 486, 1058
BmrFI	CCNGG	4 cut(s)	106, 478, 490, 805
BmsI	GCATC	6 cut(s)	502, 730, 752, 962, 1091, 1436
BoxI	GACNNNNGTC	2 cut(s)	904, 1340
BpiI	GAAGAC	3 cut(s)	476, 552, 816
BpmI	CTGGAG	2 cut(s)	241, 826
Bpu10I	CCTNAGC	1 cut(s)	870
BpuEI	CTTGAG	1 cut(s)	1165
BpuMI	CCSGG	1 cut(s)	106
BsaAI	YACGTR	1 cut(s)	788
BsaBI	GATNNNNATC	1 cut(s)	537
BsaHI	GRCGYC	1 cut(s)	98
BsaI	GGTCTC	1 cut(s)	245
BsaJI	CCNNGG	2 cut(s)	476, 488
BsaWI	WCCGGW	3 cut(s)	375, 446, 463
BsaXI	ACNNNNNCTCC	4 cut(s)	239, 269, 1211, 1241
Bsc4I	CCNNNNNNNGG	7 cut(s)	82, 336, 339, 481, 736, 949, 1452
Bse118I	RCCGGY	3 cut(s)	100, 308, 517
Bse1I	ACTGG	2 cut(s)	718, 1165
Bse3DI	GCAATG	1 cut(s)	724
Bse8I	GATNNNNATC	1 cut(s)	537
BseBI	CCWGG	3 cut(s)	478, 490, 805
BseDI	CCNNGG	2 cut(s)	476, 488
BseGI	GGATG	3 cut(s)	517, 745, 812
BseJI	GATNNNNATC	1 cut(s)	537
BseLI	CCNNNNNNNGG	7 cut(s)	82, 336, 339, 481, 736, 949, 1452
BseMI	GCAATG	1 cut(s)	724
BseMII	CTCAG	3 cut(s)	254, 884, 1415
BseNI	ACTGG	2 cut(s)	718, 1165
BseXI	GCAGC	6 cut(s)	52, 399, 402, 697, 1021, 1136
BseYI	CCCAGC	2 cut(s)	185, 678
Bsh1236I	CGCG	5 cut(s)	70, 157, 282, 394, 867
Bsh1285I	CGRYCG	2 cut(s)	149, 337
BshFI	GGCC	5 cut(s)	104, 297, 777, 803, 1290
BsiEI	CGRYCG	2 cut(s)	149, 337
BsiHKAI	GWGCWC	1 cut(s)	1209
BslFI	GGGAC	3 cut(s)	470, 664, 1042
BslI	CCNNNNNNNGG	7 cut(s)	82, 336, 339, 481, 736, 949, 1452
BsmAI	GTCTC	3 cut(s)	89, 245, 383
BsmBI	CGTCTC	2 cut(s)	89, 383
BsmFI	GGGAC	3 cut(s)	470, 664, 1042
BsmI	GAATGC	2 cut(s)	126, 616
BsnI	GGCC	5 cut(s)	104, 297, 777, 803, 1290
Bso31I	GGTCTC	1 cut(s)	245
Bsp1286I	GDGCHC	1 cut(s)	1209
Bsp143I	GATC	4 cut(s)	7, 146, 191, 334
BspANI	GGCC	5 cut(s)	104, 297, 777, 803, 1290
BspCNI	CTCAG	3 cut(s)	253, 883, 1414
BspFNI	CGCG	5 cut(s)	70, 157, 282, 394, 867
BspLI	GGNNCC	3 cut(s)	298, 486, 1058
BspMAI	CTGCAG	1 cut(s)	1102
BspPI	GGATC	2 cut(s)	2, 186
BspTNI	GGTCTC	1 cut(s)	245
BsrDI	GCAATG	1 cut(s)	724
BsrFI	RCCGGY	3 cut(s)	100, 308, 517
BsrI	ACTGG	2 cut(s)	718, 1165
BssAI	RCCGGY	3 cut(s)	100, 308, 517
BssECI	CCNNGG	2 cut(s)	476, 488
BssMI	GATC	4 cut(s)	7, 146, 191, 334
BssNI	GRCGYC	1 cut(s)	98
Bst2UI	CCWGG	3 cut(s)	478, 490, 805
Bst4CI	ACNGT	3 cut(s)	596, 944, 1022
Bst6I	CTCTTC	1 cut(s)	296
BstACI	GRCGYC	1 cut(s)	98
BstAPI	GCANNNNNTGC	1 cut(s)	412
BstBAI	YACGTR	1 cut(s)	788
BstC8I	GCNNGC	4 cut(s)	102, 310, 1217, 1275
BstDEI	CTNAG	5 cut(s)	240, 633, 870, 1367, 1401
BstEII	GGTNACC	1 cut(s)	442
BstF5I	GGATG	3 cut(s)	517, 745, 812
BstFNI	CGCG	5 cut(s)	70, 157, 282, 394, 867
BstH2I	RGCGCY	1 cut(s)	264
BstHHI	GCGC	4 cut(s)	263, 284, 685, 869
BstKTI	GATC	4 cut(s)	10, 149, 194, 337
BstMAI	GTCTC	3 cut(s)	89, 245, 383
BstMBI	GATC	4 cut(s)	7, 146, 191, 334
BstMCI	CGRYCG	2 cut(s)	149, 337
BstMWI	GCNNNNNNNGC	9 cut(s)	49, 61, 97, 106, 115, 195, 403, 412, 1043
BstNI	CCWGG	3 cut(s)	478, 490, 805
BstPAI	GACNNNNGTC	2 cut(s)	904, 1340
BstPI	GGTNACC	1 cut(s)	442
BstSCI	CCNGG	4 cut(s)	104, 476, 488, 803
BstSFI	CTRYAG	1 cut(s)	1098
BstSNI	TACGTA	1 cut(s)	788
BstUI	CGCG	5 cut(s)	70, 157, 282, 394, 867
BstV1I	GCAGC	6 cut(s)	52, 399, 402, 697, 1021, 1136
BstV2I	GAAGAC	3 cut(s)	476, 552, 816
BstX2I	RGATCY	1 cut(s)	191
BstXI	CCANNNNNNTGG	1 cut(s)	1070
BstYI	RGATCY	1 cut(s)	191
BsuI	GTATCC	1 cut(s)	1121
BsuRI	GGCC	5 cut(s)	104, 297, 777, 803, 1290
BtrI	CACGTC	1 cut(s)	439
BtsCI	GGATG	3 cut(s)	517, 745, 812
BtsIMutI	CAGTG	2 cut(s)	248, 1158
Cac8I	GCNNGC	4 cut(s)	102, 310, 1217, 1275
CfoI	GCGC	4 cut(s)	263, 284, 685, 869
Cfr10I	RCCGGY	3 cut(s)	100, 308, 517
CseI	GACGC	3 cut(s)	70, 106, 400
Csp6I	GTAC	2 cut(s)	72, 1225
CviAII	CATG	6 cut(s)	403, 817, 1053, 1070, 1153, 1431
CviQI	GTAC	2 cut(s)	72, 1225
DdeI	CTNAG	5 cut(s)	240, 633, 870, 1367, 1401
DpnI	GATC	4 cut(s)	9, 148, 193, 336
DpnII	GATC	4 cut(s)	7, 146, 191, 334
DrdI	GACNNNNNNGTC	1 cut(s)	397
DseDI	GACNNNNNNGTC	1 cut(s)	397
Eam1104I	CTCTTC	1 cut(s)	296
EarI	CTCTTC	1 cut(s)	296
Ecl136II	GAGCTC	1 cut(s)	1207
Eco105I	TACGTA	1 cut(s)	788
Eco24I	GRGCYC	1 cut(s)	1209
Eco31I	GGTCTC	1 cut(s)	245
Eco32I	GATATC	1 cut(s)	1256
Eco47I	GGWCC	6 cut(s)	85, 159, 399, 484, 1056, 1188
Eco53kI	GAGCTC	1 cut(s)	1207
Eco57I	CTGAAG	1 cut(s)	944
Eco91I	GGTNACC	1 cut(s)	442
EcoICRI	GAGCTC	1 cut(s)	1207
EcoO109I	RGGNCCY	1 cut(s)	484
EcoO65I	GGTNACC	1 cut(s)	442
EcoRI	GAATTC	1 cut(s)	235
EcoRII	CCWGG	3 cut(s)	476, 488, 803
EcoRV	GATATC	1 cut(s)	1256
EcoT22I	ATGCAT	1 cut(s)	745
EcoT38I	GRGCYC	1 cut(s)	1209
Esp3I	CGTCTC	2 cut(s)	89, 383
FaeI	CATG	6 cut(s)	406, 820, 1056, 1073, 1156, 1434
FaqI	GGGAC	3 cut(s)	470, 664, 1042
FatI	CATG	6 cut(s)	402, 816, 1052, 1069, 1152, 1430
FauI	CCCGC	4 cut(s)	333, 363, 681, 953
FblI	GTMKAC	1 cut(s)	784
FokI	GGATG	3 cut(s)	524, 752, 799
FriOI	GRGCYC	1 cut(s)	1209
FspBI	CTAG	1 cut(s)	1436
GlaI	GCGC	4 cut(s)	262, 283, 684, 868
GsaI	CCCAGC	2 cut(s)	189, 682
GsuI	CTGGAG	2 cut(s)	241, 826
HaeII	RGCGCY	1 cut(s)	264
HaeIII	GGCC	5 cut(s)	104, 297, 777, 803, 1290
HgaI	GACGC	3 cut(s)	70, 106, 400
HhaI	GCGC	4 cut(s)	263, 284, 685, 869
Hin1I	GRCGYC	1 cut(s)	98
Hin1II	CATG	6 cut(s)	406, 820, 1056, 1073, 1156, 1434
Hin6I	GCGC	4 cut(s)	261, 282, 683, 867
HinP1I	GCGC	4 cut(s)	261, 282, 683, 867
HincII	GTYRAC	1 cut(s)	133
HindII	GTYRAC	1 cut(s)	133
HinfI	GANTC	3 cut(s)	316, 544, 988
HphI	GGTGA	3 cut(s)	436, 478, 1314
Hpy166II	GTNNAC	3 cut(s)	133, 785, 920
Hpy188I	TCNGA	6 cut(s)	172, 543, 910, 1239, 1404, 1424
Hpy188III	TCNNGA	4 cut(s)	382, 872, 897, 1120
Hpy8I	GTNNAC	3 cut(s)	133, 785, 920
Hpy99I	CGWCG	4 cut(s)	64, 157, 235, 251
HpyAV	CCTTC	2 cut(s)	475, 1398
HpyCH4III	ACNGT	3 cut(s)	596, 944, 1022
HpyCH4IV	ACGT	3 cut(s)	129, 438, 787
HpyCH4V	TGCA	9 cut(s)	406, 515, 526, 743, 1052, 1082, 1100, 1152, 1176
HpyF10VI	GCNNNNNNNGC	9 cut(s)	49, 61, 97, 106, 115, 195, 403, 412, 1043
HpyF3I	CTNAG	5 cut(s)	240, 633, 870, 1367, 1401
HpySE526I	ACGT	3 cut(s)	129, 438, 787
Hsp92I	GRCGYC	1 cut(s)	98
Hsp92II	CATG	6 cut(s)	406, 820, 1056, 1073, 1156, 1434
HspAI	GCGC	4 cut(s)	261, 282, 683, 867
KroI	GCCGGC	2 cut(s)	100, 308
KroNI	GCCGGC	2 cut(s)	102, 310
Kzo9I	GATC	4 cut(s)	7, 146, 191, 334
LmnI	GCTCC	3 cut(s)	279, 1349, 1424
Lsp1109I	GCAGC	6 cut(s)	52, 399, 402, 697, 1021, 1136
LweI	GCATC	6 cut(s)	502, 730, 752, 962, 1091, 1436
MaeI	CTAG	1 cut(s)	1436
MaeII	ACGT	3 cut(s)	129, 438, 787
MaeIII	GTNAC	4 cut(s)	442, 628, 836, 1342
MalI	GATC	4 cut(s)	9, 148, 193, 336
MboI	GATC	4 cut(s)	7, 146, 191, 334
MfeI	CAATTG	1 cut(s)	1338
MflI	RGATCY	1 cut(s)	191
MhlI	GDGCHC	1 cut(s)	1209
MluCI	AATT	3 cut(s)	235, 732, 1338
MnlI	CCTC	7 cut(s)	265, 299, 330, 750, 766, 904, 1085
Mph1103I	ATGCAT	1 cut(s)	745
MreI	CGCCGGCG	1 cut(s)	308
MroNI	GCCGGC	2 cut(s)	100, 308
MroXI	GAANNNNTTC	1 cut(s)	371
MslI	CAYNNNNRTG	1 cut(s)	1068
MspA1I	CMGCKG	1 cut(s)	688
MspR9I	CCNGG	4 cut(s)	106, 478, 490, 805
MunI	CAATTG	1 cut(s)	1338
Mva1269I	GAATGC	2 cut(s)	126, 616
MvaI	CCWGG	3 cut(s)	478, 490, 805
MvnI	CGCG	5 cut(s)	70, 157, 282, 394, 867
MwoI	GCNNNNNNNGC	9 cut(s)	49, 61, 97, 106, 115, 195, 403, 412, 1043
NaeI	GCCGGC	2 cut(s)	102, 310
NciI	CCSGG	1 cut(s)	106
NdeII	GATC	4 cut(s)	7, 146, 191, 334
NgoMIV	GCCGGC	2 cut(s)	100, 308
NlaIII	CATG	6 cut(s)	406, 820, 1056, 1073, 1156, 1434
NlaIV	GGNNCC	3 cut(s)	298, 486, 1058
NmuCI	GTSAC	3 cut(s)	442, 836, 1342
NsiI	ATGCAT	1 cut(s)	745
PcsI	WCGNNNNNNNCGW	1 cut(s)	416
PctI	GAATGC	2 cut(s)	126, 616
PdiI	GCCGGC	2 cut(s)	102, 310
PdmI	GAANNNNTTC	1 cut(s)	371
PfeI	GAWTC	3 cut(s)	316, 544, 988
PflFI	GACNNNGTC	1 cut(s)	440
Ple19I	CGATCG	2 cut(s)	149, 337
Ppu21I	YACGTR	1 cut(s)	788
PpuMI	RGGWCCY	1 cut(s)	484
PshAI	GACNNNNGTC	2 cut(s)	904, 1340
Psp124BI	GAGCTC	1 cut(s)	1209
Psp5II	RGGWCCY	1 cut(s)	484
Psp6I	CCWGG	3 cut(s)	476, 488, 803
PspEI	GGTNACC	1 cut(s)	442
PspFI	CCCAGC	2 cut(s)	185, 678
PspGI	CCWGG	3 cut(s)	476, 488, 803
PspN4I	GGNNCC	3 cut(s)	298, 486, 1058
PspPPI	RGGWCCY	1 cut(s)	484
PstI	CTGCAG	1 cut(s)	1102
PsuI	RGATCY	1 cut(s)	191
PsyI	GACNNNGTC	1 cut(s)	440
PvuI	CGATCG	2 cut(s)	149, 337
RsaI	GTAC	2 cut(s)	73, 1226
RsaNI	GTAC	2 cut(s)	72, 1225
RseI	CAYNNNNRTG	1 cut(s)	1068
SacI	GAGCTC	1 cut(s)	1209
Sau3AI	GATC	4 cut(s)	7, 146, 191, 334
ScrFI	CCNGG	4 cut(s)	106, 478, 490, 805
SduI	GDGCHC	1 cut(s)	1209
SfaNI	GCATC	6 cut(s)	502, 730, 752, 962, 1091, 1436
SfcI	CTRYAG	1 cut(s)	1098
SgrAI	CRCCGGYG	1 cut(s)	308
SinI	GGWCC	6 cut(s)	85, 159, 399, 484, 1056, 1188
SmiMI	CAYNNNNRTG	1 cut(s)	1068
SmlI	CTYRAG	1 cut(s)	1144
SmoI	CTYRAG	1 cut(s)	1144
SnaBI	TACGTA	1 cut(s)	788
Sse9I	AATT	3 cut(s)	235, 732, 1338
SspMI	CTAG	1 cut(s)	1436
SstI	GAGCTC	1 cut(s)	1209
StyD4I	CCNGG	4 cut(s)	104, 476, 488, 803
TaaI	ACNGT	3 cut(s)	596, 944, 1022
TaiI	ACGT	3 cut(s)	132, 441, 790
TaqI	TCGA	2 cut(s)	114, 216
TaqII	GACCGA	1 cut(s)	1119
TasI	AATT	3 cut(s)	235, 732, 1338
TauI	GCSGC	4 cut(s)	55, 58, 287, 397
TfiI	GAWTC	3 cut(s)	316, 544, 988
TscAI	CASTG	2 cut(s)	248, 1165
TseFI	GTSAC	3 cut(s)	442, 836, 1342
TseI	GCWGC	6 cut(s)	40, 412, 415, 685, 1034, 1149
Tsp45I	GTSAC	3 cut(s)	442, 836, 1342
TspDTI	ATGAA	6 cut(s)	169, 365, 443, 801, 1058, 1374
TspGWI	ACGGA	2 cut(s)	1103, 1344
TspRI	CASTG	2 cut(s)	248, 1165
Tth111I	GACNNNGTC	1 cut(s)	440
VpaK11BI	GGWCC	6 cut(s)	85, 159, 399, 484, 1056, 1188
XapI	RAATTY	2 cut(s)	235, 732
XmiI	GTMKAC	1 cut(s)	784
XmnI	GAANNNNTTC	1 cut(s)	371
XspI	CTAG	1 cut(s)	1436
Zsp2I	ATGCAT	1 cut(s)	745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.