pycom04g06380

Fizzy-related

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
6454426 .. 6458601
4176 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g06380.4

Sequence Viewer

Length: 1434 bp
ATGGAGGATACCACTCCGACAACCCCATCGACTCCGACTCTGCTCCGCACTCCTCAGGCACTACATTCCCTAACCCCATCTCGGCACATCGACCGCCTGATCAACTACAACCACCACCAATCGCCGTCCAGGACCATCTACTCCGATAGGTTCATCCCCAGTAGAACCGGTTCCAACTTCCCCCTCTTCGACATCTCCAATACTCCATCCGAGGGCCGCGATGACTCGTCAAGCGCCTACGGCACTCTCCTACGCGCTGCCCTCTTTGGACCTGACTCCGCCGGCGTCGTCCCTCCGGCGACGCCTGAGAAAAGGAGCGCGATTCAGATGAACCCGCCCAGCCCCAACATCTTCCGGTTCAAGACCGAGACTCGCCGGTCAATGCACTCGCTTTCCCCTTTTGGGTTCGATGATGTGGTCACCGGAGTTCACCATAGCCCCGTCAAGGCTCCTCGGAAGGTTCCCCGGTCGCCTTATAAGGTTTTGGATGCACCTGCTTTGCAGGACGATTTCTATCTGAATCTTGTCGATTGGTCTTCGCACAATGTGCTTGCTGTTGGGTTGGGAAATTGTGTTTATTTATGGAATGCTTGTAGTAGCAAGGTAACTAAGTTATGTGACTTGGGGATTGATGATAGTGTCTGTTCCGTTGGCTGGGCTCAACGTGGAACTCATCTTGCGGTTGGAACTAGCAATGGGAAAGTCCAAATATGGGATGCGTCCCGGTGTAGGAGGGTAAGAACCATGGAGGGCCACCGACTACGCATTGGCGCCTTAGCCTGGAGTTCATCCACGCTGTCTTCTGGTAGCCGGGACAAGACTATTCTTCAACGTGATATTCGTGCTCAGGACGATTTTGTTAGCAAACTTTCTGGACACAAGTCAGAGGTTTGTGGACTGAAATGGTCATATGATAACCGTGAGTTGGCATCAGGCGGGAATGATAACAGGCTTTTTGTTTGGAATCAACATTCAACTCAACCGGTTCTCAAATACTGTGAGCATACTGCCGCTGTGAAAGCTATTGCATGGTCTCCCCATCATCATGGGCTTCTTGCATCTGGAGGAGGAACAGCAGACCGATGTATTCGTTTCTGGAATACTACCACCAACTCACACTTGAGCTGCATGGACACTGGAAGTCAGGTTTGCAATCTTGTGTGGTCTAAAAATGTCAATGAACTAGTCAGCACCCATGGATACTCCCAAAATCAAATAATAGTTTGGAGATATCCCACCATGTCAAAGCTGGCAACTCTTACGGGCCATTCATACAGAGTTCTTTATCTTGCCATCTCACCTGATGGACAGACAATTGTCACTGGAGCAGGAGATGAAACACTAAGATTTTGGAATGTGTTTCCTTCCCCCAAGTCCCAGAACAGGGAAAGTGAAATTGGAGCATCATCGCTTGGAAGAACCGTTATCCGGTGA

Protein Analysis

478

Amino Acids

52.72

Weight (kDa)

9.26

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011780)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 477
AarI CACCTGC 1 cut(s) 502
AasI GACNNNNNNGTC 1 cut(s) 376
Acc36I ACCTGC 1 cut(s) 502
AccB1I GGYRCC 1 cut(s) 770
AccII CGCG 3 cut(s) 219, 255, 320
AciI CCGC 8 cut(s) 46, 94, 217, 279, 335, 680, 936, 1011
AcyI GRCGYC 3 cut(s) 285, 302, 771
AdeI CACNNNGTG 1 cut(s) 547
AgeI ACCGGT 2 cut(s) 167, 982
AgsI TTSAA 3 cut(s) 361, 830, 975
AhlI ACTAGT 1 cut(s) 1183
AjnI CCWGG 2 cut(s) 128, 779
AjuI GAANNNNNNNTTGG 2 cut(s) 1380, 1412
AluBI AGCT 3 cut(s) 1022, 1125, 1249
AluI AGCT 3 cut(s) 1022, 1125, 1249
Alw21I GWGCWC 1 cut(s) 847
Alw26I GTCTC 2 cut(s) 362, 1038
AoxI GGCC 3 cut(s) 214, 751, 1264
ApeKI GCWGC 2 cut(s) 257, 1125
AsiGI ACCGGT 2 cut(s) 167, 982
Asp700I GAANNNNTTC 1 cut(s) 169
AspLEI GCGC 4 cut(s) 236, 257, 320, 773
AspS9I GGNCC 5 cut(s) 132, 214, 269, 751, 1264
AsuC2I CCSGG 3 cut(s) 466, 724, 812
AsuHPI GGTGA 3 cut(s) 412, 422, 1290
AvaII GGWCC 2 cut(s) 132, 269
AxyI CCTNAGG 1 cut(s) 54
BanI GGYRCC 1 cut(s) 770
BanII GRGCYC 1 cut(s) 661
BbsI GAAGAC 2 cut(s) 528, 792
Bbv12I GWGCWC 1 cut(s) 847
BbvI GCAGC 2 cut(s) 244, 1112
BccI CCATC 7 cut(s) 34, 85, 143, 214, 1047, 1298, 1301
BceAI ACGGC 2 cut(s) 109, 256
BciT130I CCWGG 2 cut(s) 130, 781
BciVI GTATCC 1 cut(s) 1193
BclI TGATCA 1 cut(s) 99
BcnI CCSGG 3 cut(s) 466, 724, 812
BcoDI GTCTC 2 cut(s) 362, 1038
BcuI ACTAGT 1 cut(s) 1183
BfaI CTAG 2 cut(s) 690, 1184
BfoI RGCGCY 2 cut(s) 237, 774
BfuAI ACCTGC 1 cut(s) 502
BfuI GTATCC 1 cut(s) 1193
BisI GCNGC 4 cut(s) 217, 258, 1011, 1126
BlsI GCNGC 4 cut(s) 218, 259, 1012, 1127
Bme1390I CCNGG 5 cut(s) 130, 466, 724, 781, 812
Bme18I GGWCC 2 cut(s) 132, 269
BmgT120I GGNCC 5 cut(s) 132, 214, 269, 751, 1264
BmiI GGNNCC 4 cut(s) 172, 450, 462, 772
BmrFI CCNGG 5 cut(s) 130, 466, 724, 781, 812
BmrI ACTGGG 1 cut(s) 153
BmsI GCATC 5 cut(s) 478, 706, 938, 1067, 1412
BmuI ACTGGG 1 cut(s) 153
BoxI GACNNNNGTC 2 cut(s) 880, 1316
BpiI GAAGAC 2 cut(s) 528, 792
BpmI CTGGAG 3 cut(s) 802, 1083, 1344
Bpu10I CCTNAGC 2 cut(s) 775, 846
BpuEI CTTGAG 1 cut(s) 1141
BpuMI CCSGG 3 cut(s) 466, 724, 812
BsaBI GATNNNNATC 1 cut(s) 513
BsaHI GRCGYC 3 cut(s) 285, 302, 771
BsaI GGTCTC 1 cut(s) 1038
BsaJI CCNNGG 5 cut(s) 210, 452, 464, 744, 1195
BsaWI WCCGGW 5 cut(s) 167, 354, 422, 982, 1428
Bse118I RCCGGY 4 cut(s) 167, 281, 375, 982
Bse1I ACTGG 3 cut(s) 159, 1141, 1327
Bse21I CCTNAGG 1 cut(s) 54
Bse3DI GCAATG 1 cut(s) 700
Bse8I GATNNNNATC 1 cut(s) 513
BseBI CCWGG 2 cut(s) 130, 781
BseDI CCNNGG 5 cut(s) 210, 452, 464, 744, 1195
BseGI GGATG 5 cut(s) 153, 206, 493, 721, 788
BseJI GATNNNNATC 1 cut(s) 513
BseMI GCAATG 1 cut(s) 700
BseMII CTCAG 3 cut(s) 68, 297, 860
BseNI ACTGG 3 cut(s) 159, 1141, 1327
BseRI GAGGAG 3 cut(s) 42, 441, 1080
BseXI GCAGC 2 cut(s) 244, 1112
BseYI CCCAGC 2 cut(s) 338, 654
Bsh1236I CGCG 3 cut(s) 219, 255, 320
Bsh1285I CGRYCG 2 cut(s) 94, 470
BshFI GGCC 3 cut(s) 216, 753, 1266
BshNI GGYRCC 1 cut(s) 770
BshTI ACCGGT 2 cut(s) 167, 982
BsiEI CGRYCG 2 cut(s) 94, 470
BsiHKAI GWGCWC 1 cut(s) 847
BslFI GGGAC 4 cut(s) 275, 706, 827, 1360
BsmAI GTCTC 2 cut(s) 362, 1038
BsmFI GGGAC 4 cut(s) 275, 706, 827, 1360
BsmI GAATGC 1 cut(s) 592
BsnI GGCC 3 cut(s) 216, 753, 1266
Bso31I GGTCTC 1 cut(s) 1038
Bsp1286I GDGCHC 2 cut(s) 661, 847
Bsp143I GATC 1 cut(s) 99
Bsp19I CCATGG 2 cut(s) 744, 1195
BspACI CCGC 8 cut(s) 46, 94, 217, 279, 335, 680, 936, 1011
BspANI GGCC 3 cut(s) 216, 753, 1266
BspCNI CTCAG 3 cut(s) 67, 298, 859
BspFNI CGCG 3 cut(s) 219, 255, 320
BspLI GGNNCC 4 cut(s) 172, 450, 462, 772
BspMI ACCTGC 1 cut(s) 502
BspT107I GGYRCC 1 cut(s) 770
BspTNI GGTCTC 1 cut(s) 1038
BsrDI GCAATG 1 cut(s) 700
BsrFI RCCGGY 4 cut(s) 167, 281, 375, 982
BsrI ACTGG 3 cut(s) 159, 1141, 1327
BssAI RCCGGY 4 cut(s) 167, 281, 375, 982
BssECI CCNNGG 5 cut(s) 210, 452, 464, 744, 1195
BssMI GATC 1 cut(s) 99
BssNI GRCGYC 3 cut(s) 285, 302, 771
BssT1I CCWWGG 2 cut(s) 744, 1195
Bst2UI CCWGG 2 cut(s) 130, 781
Bst4CI ACNGT 3 cut(s) 920, 998, 1423
Bst6I CTCTTC 1 cut(s) 191
BstACI GRCGYC 3 cut(s) 285, 302, 771
BstAPI GCANNNNNTGC 1 cut(s) 547
BstC8I GCNNGC 3 cut(s) 283, 552, 1251
BstDEI CTNAG 6 cut(s) 54, 306, 609, 775, 846, 1343
BstDSI CCRYGG 2 cut(s) 744, 1195
BstEII GGTNACC 1 cut(s) 418
BstF5I GGATG 5 cut(s) 153, 206, 493, 721, 788
BstFNI CGCG 3 cut(s) 219, 255, 320
BstH2I RGCGCY 2 cut(s) 237, 774
BstHHI GCGC 4 cut(s) 236, 257, 320, 773
BstKTI GATC 1 cut(s) 102
BstMAI GTCTC 2 cut(s) 362, 1038
BstMBI GATC 1 cut(s) 99
BstMCI CGRYCG 2 cut(s) 94, 470
BstMWI GCNNNNNNNGC 3 cut(s) 240, 547, 1019
BstNI CCWGG 2 cut(s) 130, 781
BstPAI GACNNNNGTC 2 cut(s) 880, 1316
BstPI GGTNACC 1 cut(s) 418
BstSCI CCNGG 5 cut(s) 128, 464, 722, 779, 810
BstUI CGCG 3 cut(s) 219, 255, 320
BstV1I GCAGC 2 cut(s) 244, 1112
BstV2I GAAGAC 2 cut(s) 528, 792
BstXI CCANNNNNNTGG 1 cut(s) 1046
Bsu36I CCTNAGG 1 cut(s) 54
BsuI GTATCC 1 cut(s) 1193
BsuRI GGCC 3 cut(s) 216, 753, 1266
BtgI CCRYGG 2 cut(s) 744, 1195
BtgZI GCGATG 2 cut(s) 234, 1392
BtsCI GGATG 5 cut(s) 153, 206, 493, 721, 788
BtsIMutI CAGTG 2 cut(s) 1134, 1320
BveI ACCTGC 1 cut(s) 502
Cac8I GCNNGC 3 cut(s) 283, 552, 1251
CfoI GCGC 4 cut(s) 236, 257, 320, 773
Cfr10I RCCGGY 4 cut(s) 167, 281, 375, 982
Cfr13I GGNCC 5 cut(s) 132, 214, 269, 751, 1264
CseI GACGC 3 cut(s) 274, 310, 708
CspAI ACCGGT 2 cut(s) 167, 982
CviAII CATG 6 cut(s) 745, 1029, 1046, 1129, 1196, 1240
DdeI CTNAG 6 cut(s) 54, 306, 609, 775, 846, 1343
DinI GGCGCC 1 cut(s) 772
DpnI GATC 1 cut(s) 101
DpnII GATC 1 cut(s) 99
DraIII CACNNNGTG 1 cut(s) 547
DrdI GACNNNNNNGTC 1 cut(s) 376
DseDI GACNNNNNNGTC 1 cut(s) 376
Eam1104I CTCTTC 1 cut(s) 191
EarI CTCTTC 1 cut(s) 191
EciI GGCGGA 1 cut(s) 268
Eco130I CCWWGG 2 cut(s) 744, 1195
Eco24I GRGCYC 1 cut(s) 661
Eco31I GGTCTC 1 cut(s) 1038
Eco32I GATATC 1 cut(s) 1232
Eco47I GGWCC 2 cut(s) 132, 269
Eco81I CCTNAGG 1 cut(s) 54
Eco91I GGTNACC 1 cut(s) 418
EcoO65I GGTNACC 1 cut(s) 418
EcoRII CCWGG 2 cut(s) 128, 779
EcoRV GATATC 1 cut(s) 1232
EcoT14I CCWWGG 2 cut(s) 744, 1195
EcoT38I GRGCYC 1 cut(s) 661
EgeI GGCGCC 1 cut(s) 772
EheI GGCGCC 1 cut(s) 772
ErhI CCWWGG 2 cut(s) 744, 1195
FaeI CATG 6 cut(s) 748, 1032, 1049, 1132, 1199, 1243
FaqI GGGAC 4 cut(s) 275, 706, 827, 1360
FatI CATG 6 cut(s) 744, 1028, 1045, 1128, 1195, 1239
FauI CCCGC 2 cut(s) 342, 929
FauNDI CATATG 1 cut(s) 910
FbaI TGATCA 1 cut(s) 99
Fnu4HI GCNGC 4 cut(s) 217, 258, 1011, 1126
FokI GGATG 5 cut(s) 140, 193, 500, 728, 775
FriOI GRGCYC 1 cut(s) 661
Fsp4HI GCNGC 4 cut(s) 217, 258, 1011, 1126
FspBI CTAG 2 cut(s) 690, 1184
GlaI GCGC 4 cut(s) 235, 256, 319, 772
GluI GCNGC 4 cut(s) 217, 258, 1011, 1126
GsaI CCCAGC 2 cut(s) 342, 658
GsuI CTGGAG 3 cut(s) 802, 1083, 1344
HaeII RGCGCY 2 cut(s) 237, 774
HaeIII GGCC 3 cut(s) 216, 753, 1266
HgaI GACGC 3 cut(s) 274, 310, 708
HhaI GCGC 4 cut(s) 236, 257, 320, 773
Hin1I GRCGYC 3 cut(s) 285, 302, 771
Hin1II CATG 6 cut(s) 748, 1032, 1049, 1132, 1199, 1243
Hin6I GCGC 4 cut(s) 234, 255, 318, 771
HinP1I GCGC 4 cut(s) 234, 255, 318, 771
HinfI GANTC 8 cut(s) 31, 37, 224, 275, 322, 370, 520, 964
HphI GGTGA 3 cut(s) 412, 422, 1290
Hpy166II GTNNAC 2 cut(s) 430, 896
Hpy188I TCNGA 8 cut(s) 18, 36, 145, 211, 327, 456, 519, 886
Hpy188III TCNNGA 5 cut(s) 361, 848, 873, 1062, 1096
Hpy8I GTNNAC 2 cut(s) 430, 896
Hpy99I CGWCG 2 cut(s) 290, 304
HpyAV CCTTC 2 cut(s) 451, 1374
HpyCH4III ACNGT 3 cut(s) 920, 998, 1423
HpyCH4IV ACGT 2 cut(s) 664, 832
HpyCH4V TGCA 7 cut(s) 385, 491, 502, 1028, 1058, 1128, 1152
HpyF10VI GCNNNNNNNGC 3 cut(s) 240, 547, 1019
HpyF3I CTNAG 6 cut(s) 54, 306, 609, 775, 846, 1343
HpySE526I ACGT 2 cut(s) 664, 832
Hsp92I GRCGYC 3 cut(s) 285, 302, 771
Hsp92II CATG 6 cut(s) 748, 1032, 1049, 1132, 1199, 1243
HspAI GCGC 4 cut(s) 234, 255, 318, 771
KasI GGCGCC 1 cut(s) 770
KroI GCCGGC 1 cut(s) 281
KroNI GCCGGC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 99
Kzo9I GATC 1 cut(s) 99
LmnI GCTCC 5 cut(s) 48, 315, 454, 1325, 1400
Lsp1109I GCAGC 2 cut(s) 244, 1112
LweI GCATC 5 cut(s) 478, 706, 938, 1067, 1412
MaeI CTAG 2 cut(s) 690, 1184
MaeII ACGT 2 cut(s) 664, 832
MaeIII GTNAC 4 cut(s) 418, 604, 617, 1318
MalI GATC 1 cut(s) 101
MboI GATC 1 cut(s) 99
MboII GAAGA 6 cut(s) 178, 343, 528, 792, 818, 1428
MfeI CAATTG 1 cut(s) 1314
MhlI GDGCHC 2 cut(s) 661, 847
MluCI AATT 3 cut(s) 568, 1314, 1395
Mly113I GGCGCC 1 cut(s) 771
MlyI GAGTC 5 cut(s) 25, 31, 218, 269, 364
MmeI TCCRAC 4 cut(s) 41, 59, 198, 664
MreI CGCCGGCG 1 cut(s) 281
MroNI GCCGGC 1 cut(s) 281
MroXI GAANNNNTTC 1 cut(s) 169
MslI CAYNNNNRTG 1 cut(s) 1044
MspA1I CMGCKG 1 cut(s) 1013
MspR9I CCNGG 5 cut(s) 130, 466, 724, 781, 812
MunI CAATTG 1 cut(s) 1314
Mva1269I GAATGC 1 cut(s) 592
MvaI CCWGG 2 cut(s) 130, 781
MvnI CGCG 3 cut(s) 219, 255, 320
MwoI GCNNNNNNNGC 3 cut(s) 240, 547, 1019
NaeI GCCGGC 1 cut(s) 283
NarI GGCGCC 1 cut(s) 771
NciI CCSGG 3 cut(s) 466, 724, 812
NcoI CCATGG 2 cut(s) 744, 1195
NdeI CATATG 1 cut(s) 910
NdeII GATC 1 cut(s) 99
NgoMIV GCCGGC 1 cut(s) 281
NlaIII CATG 6 cut(s) 748, 1032, 1049, 1132, 1199, 1243
NlaIV GGNNCC 4 cut(s) 172, 450, 462, 772
NmeAIII GCCGAG 1 cut(s) 61
NmuCI GTSAC 3 cut(s) 418, 617, 1318
PaqCI CACCTGC 1 cut(s) 502
PcsI WCGNNNNNNNCGW 1 cut(s) 838
PctI GAATGC 1 cut(s) 592
PdiI GCCGGC 1 cut(s) 283
PdmI GAANNNNTTC 1 cut(s) 169
PfeI GAWTC 3 cut(s) 322, 520, 964
PfoI TCCNGGA 1 cut(s) 128
PinAI ACCGGT 2 cut(s) 167, 982
PkrI GCNGC 4 cut(s) 218, 259, 1012, 1127
PleI GAGTC 5 cut(s) 25, 31, 218, 269, 364
PluTI GGCGCC 1 cut(s) 774
PpsI GAGTC 5 cut(s) 25, 31, 218, 269, 364
PshAI GACNNNNGTC 2 cut(s) 880, 1316
PsiI TTATAA 1 cut(s) 477
Psp6I CCWGG 2 cut(s) 128, 779
PspEI GGTNACC 1 cut(s) 418
PspFI CCCAGC 2 cut(s) 338, 654
PspGI CCWGG 2 cut(s) 128, 779
PspN4I GGNNCC 4 cut(s) 172, 450, 462, 772
PspPI GGNCC 5 cut(s) 132, 214, 269, 751, 1264
PsrI GAACNNNNNNTAC 2 cut(s) 154, 186
RseI CAYNNNNRTG 1 cut(s) 1044
SatI GCNGC 4 cut(s) 217, 258, 1011, 1126
Sau3AI GATC 1 cut(s) 99
Sau96I GGNCC 5 cut(s) 132, 214, 269, 751, 1264
SchI GAGTC 5 cut(s) 25, 31, 218, 269, 364
ScrFI CCNGG 5 cut(s) 130, 466, 724, 781, 812
SduI GDGCHC 2 cut(s) 661, 847
SfaNI GCATC 5 cut(s) 478, 706, 938, 1067, 1412
SfoI GGCGCC 1 cut(s) 772
SgrAI CRCCGGYG 1 cut(s) 281
SinI GGWCC 2 cut(s) 132, 269
SmiMI CAYNNNNRTG 1 cut(s) 1044
SmlI CTYRAG 1 cut(s) 1120
SmoI CTYRAG 1 cut(s) 1120
SpeI ACTAGT 1 cut(s) 1183
Sse9I AATT 3 cut(s) 568, 1314, 1395
SsiI CCGC 8 cut(s) 46, 94, 217, 279, 335, 680, 936, 1011
SspDI GGCGCC 1 cut(s) 770
SspMI CTAG 2 cut(s) 690, 1184
StyD4I CCNGG 5 cut(s) 128, 464, 722, 779, 810
StyI CCWWGG 2 cut(s) 744, 1195
TaaI ACNGT 3 cut(s) 920, 998, 1423
TaiI ACGT 2 cut(s) 667, 835
TaqI TCGA 5 cut(s) 29, 90, 189, 408, 528
TaqII GACCGA 2 cut(s) 380, 1095
TasI AATT 3 cut(s) 568, 1314, 1395
TauI GCSGC 2 cut(s) 219, 1013
TfiI GAWTC 3 cut(s) 322, 520, 964
TscAI CASTG 2 cut(s) 1141, 1327
TseFI GTSAC 3 cut(s) 418, 617, 1318
TseI GCWGC 2 cut(s) 257, 1125
Tsp45I GTSAC 3 cut(s) 418, 617, 1318
TspDTI ATGAA 6 cut(s) 142, 344, 777, 1194, 1260, 1350
TspGWI ACGGA 1 cut(s) 637
TspRI CASTG 2 cut(s) 1141, 1327
VpaK11BI GGWCC 2 cut(s) 132, 269
XcmI CCANNNNNNNNNTGG 1 cut(s) 1246
XmnI GAANNNNTTC 1 cut(s) 169
XspI CTAG 2 cut(s) 690, 1184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.