MD00G1180300.v1.1

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
42507566 .. 42508603
1038 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1180300.v1.1.491

Sequence Viewer

Length: 1038 bp
ATGGGTTCAATGCCGAAACTTTCCCTCCTCCTCCTCACCACCGCCGTCCTCTTCCTCGCCGCCTTCACCGAGTTATCCGAATCCAACCCGGACCCAGTCCCCGAACTCCTCTCCCTCCAAGCCCGATCCAAATCTGGAGTGATCCGTCTCGACGACCGCTCCCTCGCCAAATTCCTCACCGCTGTTAAACCCCCGCGACCCTACTGGGTCCTCATCTTCTTCGATTCCGCGAAGCTCCACGACAAGTCCGAGCTCCACCTCAAGGAGCTCCGCAAAGAGTTCGCCGTCGTCGCCACCTCCTTCATCGAGAACAACCAGGACCCGTCGTCCCCCTCCCACGCCAAGCTTTTCTTCTGCGACATAGAGTTCGAGGACTCGCAGCACAGCTTTGCCCAATTCGGAGTCAACTCGCTGCCGCACATCCGCCTGATCGGCCCCACCCACGGCCTTAAGGAGTCGCAGCAGATGGACCAGGGCGATTTCTCCCGATTGGCCGAGTCAATGTCCGAGTTCATCGAGTCCAAGACCAAACTCGTCGTGGGTCCAATCCATCGGCCTCCGATGCTGTCCAAGAACCAGATTATGTTCGCAACCATTGCCTGGCTGGTTTGGACGCCGTTCATTGCGAAGAAGATTTACAGTGGCAAGACATTGCTTCACGATCCGAGGATTTGGCTATCGGGATCGGTTTTCATTTACTTCTTCAGCGTCTCGGGCGCAATGCATAACATTATTAGGAACATGCCAATGTTTTTGGTTGATAGGAATGATCCTTCCAAGCTCATATTTTTCTACCAGGGCTCCGGAATGCAGCTAGGAACAGAGGGATTCACCGTCGGATTCTTGTACACCATTGTCGGGTTGTTGCTGGCATTCCTCACCCGCGTGCTTGTTACGGTTCGAAATGTCAAGGCGCAGCGCCTTGTGATGATTATTGCGCTGTGTGTTTCGTTCTGGGCGGTGAAGAAGGTCATTCAGTTGGATAACTGGAAGACGGGTTACGGGGTGCATGCTTTTTGGCCTACCAGCTGGAACTGA

Protein Analysis

346

Amino Acids

39.05

Weight (kDa)

9.32

Isoelectric Point (pI)

37.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OST3_OST6 PF04756 35 - 334 1.1e-75 OST3 / OST6 family, transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013991)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 600
AccBSI CCGCTC 1 cut(s) 159
AccII CGCG 3 cut(s) 196, 230, 885
AccIII TCCGGA 1 cut(s) 803
AclWI GGATC 5 cut(s) 120, 136, 656, 691, 764
AcoI YGGCCR 1 cut(s) 492
AcsI RAATTY 1 cut(s) 170
AcuI CTGAAG 1 cut(s) 688
AcyI GRCGYC 1 cut(s) 614
AfaI GTAC 1 cut(s) 848
AfiI CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
AflII CTTAAG 1 cut(s) 449
AgsI TTSAA 1 cut(s) 9
AhdI GACNNNNNGTC 1 cut(s) 325
AjnI CCWGG 4 cut(s) 315, 471, 599, 795
AjuI GAANNNNNNNTTGG 2 cut(s) 335, 367
AleI CACNNNNGTG 1 cut(s) 884
AluBI AGCT 8 cut(s) 235, 253, 268, 346, 387, 781, 814, 1029
AluI AGCT 8 cut(s) 235, 253, 268, 346, 387, 781, 814, 1029
Alw21I GWGCWC 2 cut(s) 255, 270
Alw26I GTCTC 2 cut(s) 152, 715
AlwI GGATC 5 cut(s) 120, 136, 656, 691, 764
Ama87I CYCGRG 1 cut(s) 712
Aor13HI TCCGGA 1 cut(s) 803
AoxI GGCC 5 cut(s) 433, 445, 492, 554, 1019
ApeKI GCWGC 5 cut(s) 379, 412, 460, 811, 916
ApoI RAATTY 1 cut(s) 170
ArsI GACNNNNNNTTYG 2 cut(s) 350, 382
AspLEI GCGC 4 cut(s) 719, 916, 921, 940
AspS9I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
AsuC2I CCSGG 1 cut(s) 89
AsuHPI GGTGA 6 cut(s) 28, 58, 169, 823, 871, 973
AsuII TTCGAA 1 cut(s) 901
AvaI CYCGRG 1 cut(s) 712
AvaII GGWCC 5 cut(s) 91, 208, 319, 469, 542
BanII GRGCYC 3 cut(s) 255, 270, 803
BarI GAAGNNNNNNTAC 4 cut(s) 620, 652, 983, 1015
BbsI GAAGAC 1 cut(s) 998
Bbv12I GWGCWC 2 cut(s) 255, 270
BbvI GCAGC 5 cut(s) 391, 399, 472, 823, 928
BccI CCATC 2 cut(s) 460, 558
BceAI ACGGC 4 cut(s) 29, 269, 460, 601
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BciT130I CCWGG 4 cut(s) 317, 473, 601, 797
BcnI CCSGG 1 cut(s) 89
BcoDI GTCTC 2 cut(s) 152, 715
BfaI CTAG 1 cut(s) 815
BfoI RGCGCY 1 cut(s) 922
BfrI CTTAAG 1 cut(s) 449
BglI GCCNNNNNGGC 1 cut(s) 432
BisI GCNGC 7 cut(s) 60, 380, 413, 416, 461, 812, 917
BlsI GCNGC 7 cut(s) 61, 381, 414, 417, 462, 813, 918
Bme1390I CCNGG 5 cut(s) 89, 317, 473, 601, 797
Bme18I GGWCC 5 cut(s) 91, 208, 319, 469, 542
BmeRI GACNNNNNGTC 1 cut(s) 325
BmeT110I CYCGRG 1 cut(s) 712
BmgT120I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
BmiI GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
BmrFI CCNGG 5 cut(s) 89, 317, 473, 601, 797
BmrI ACTGGG 2 cut(s) 89, 214
BmsI GCATC 1 cut(s) 552
BmuI ACTGGG 2 cut(s) 89, 214
BpiI GAAGAC 1 cut(s) 998
BpmI CTGGAG 1 cut(s) 156
Bpu14I TTCGAA 1 cut(s) 901
BpuEI CTTGAG 1 cut(s) 245
BpuMI CCSGG 1 cut(s) 89
BsaBI GATNNNNATC 1 cut(s) 130
BsaHI GRCGYC 1 cut(s) 614
BsaJI CCNNGG 4 cut(s) 442, 472, 665, 796
BsaWI WCCGGW 1 cut(s) 803
BsaXI ACNNNNNCTCC 6 cut(s) 9, 39, 143, 173, 785, 815
Bsc4I CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
Bse1I ACTGG 3 cut(s) 95, 209, 992
Bse3DI GCAATG 4 cut(s) 594, 621, 650, 726
Bse8I GATNNNNATC 1 cut(s) 130
BseAI TCCGGA 1 cut(s) 803
BseBI CCWGG 4 cut(s) 317, 473, 601, 797
BseDI CCNNGG 4 cut(s) 442, 472, 665, 796
BseGI GGATG 1 cut(s) 420
BseJI GATNNNNATC 1 cut(s) 130
BseLI CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
BseMI GCAATG 4 cut(s) 594, 621, 650, 726
BseNI ACTGG 3 cut(s) 95, 209, 992
BseRI GAGGAG 4 cut(s) 17, 20, 23, 98
BseXI GCAGC 5 cut(s) 391, 399, 472, 823, 928
Bsh1236I CGCG 3 cut(s) 196, 230, 885
Bsh1285I CGRYCG 1 cut(s) 157
BshFI GGCC 5 cut(s) 435, 447, 494, 556, 1021
BsiEI CGRYCG 1 cut(s) 157
BsiHKAI GWGCWC 2 cut(s) 255, 270
BsiHKCI CYCGRG 1 cut(s) 712
BsiSI CCGG 2 cut(s) 89, 804
BslFI GGGAC 2 cut(s) 83, 313
BslI CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
BsmAI GTCTC 2 cut(s) 152, 715
BsmBI CGTCTC 2 cut(s) 152, 715
BsmFI GGGAC 2 cut(s) 83, 313
BsmI GAATGC 2 cut(s) 813, 872
BsnI GGCC 5 cut(s) 435, 447, 494, 556, 1021
BsoBI CYCGRG 1 cut(s) 712
Bsp119I TTCGAA 1 cut(s) 901
Bsp1286I GDGCHC 3 cut(s) 255, 270, 803
Bsp13I TCCGGA 1 cut(s) 803
Bsp1407I TGTACA 1 cut(s) 846
Bsp143I GATC 6 cut(s) 125, 141, 429, 661, 683, 769
BspANI GGCC 5 cut(s) 435, 447, 494, 556, 1021
BspEI TCCGGA 1 cut(s) 803
BspFNI CGCG 3 cut(s) 196, 230, 885
BspLI GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
BspPI GGATC 5 cut(s) 120, 136, 656, 691, 764
BspT104I TTCGAA 1 cut(s) 901
BspTI CTTAAG 1 cut(s) 449
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 4 cut(s) 594, 621, 650, 726
BsrGI TGTACA 1 cut(s) 846
BsrI ACTGG 3 cut(s) 95, 209, 992
BssECI CCNNGG 4 cut(s) 442, 472, 665, 796
BssMI GATC 6 cut(s) 125, 141, 429, 661, 683, 769
BssNI GRCGYC 1 cut(s) 614
Bst2UI CCWGG 4 cut(s) 317, 473, 601, 797
Bst4CI ACNGT 3 cut(s) 641, 835, 898
Bst6I CTCTTC 1 cut(s) 56
BstACI GRCGYC 1 cut(s) 614
BstAFI CTTAAG 1 cut(s) 449
BstAPI GCANNNNNTGC 1 cut(s) 596
BstAUI TGTACA 1 cut(s) 846
BstBI TTCGAA 1 cut(s) 901
BstC8I GCNNGC 3 cut(s) 870, 887, 1011
BstDSI CCRYGG 1 cut(s) 442
BstF5I GGATG 1 cut(s) 420
BstFNI CGCG 3 cut(s) 196, 230, 885
BstH2I RGCGCY 1 cut(s) 922
BstHHI GCGC 4 cut(s) 719, 916, 921, 940
BstKTI GATC 6 cut(s) 128, 144, 432, 664, 686, 772
BstMAI GTCTC 2 cut(s) 152, 715
BstMBI GATC 6 cut(s) 125, 141, 429, 661, 683, 769
BstMCI CGRYCG 1 cut(s) 157
BstMWI GCNNNNNNNGC 5 cut(s) 290, 432, 562, 596, 714
BstNI CCWGG 4 cut(s) 317, 473, 601, 797
BstNSI RCATGY 2 cut(s) 745, 1013
BstSCI CCNGG 5 cut(s) 87, 315, 471, 599, 795
BstUI CGCG 3 cut(s) 196, 230, 885
BstV1I GCAGC 5 cut(s) 391, 399, 472, 823, 928
BstV2I GAAGAC 1 cut(s) 998
BsuRI GGCC 5 cut(s) 435, 447, 494, 556, 1021
BtgI CCRYGG 1 cut(s) 442
BtsCI GGATG 1 cut(s) 420
BtsIMutI CAGTG 1 cut(s) 646
Cac8I GCNNGC 3 cut(s) 870, 887, 1011
CfoI GCGC 4 cut(s) 719, 916, 921, 940
Cfr13I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
CseI GACGC 2 cut(s) 622, 697
Csp6I GTAC 1 cut(s) 847
CviAII CATG 2 cut(s) 742, 1010
CviQI GTAC 1 cut(s) 847
DpnI GATC 6 cut(s) 127, 143, 431, 663, 685, 771
DpnII GATC 6 cut(s) 125, 141, 429, 661, 683, 769
DriI GACNNNNNGTC 1 cut(s) 325
EaeI YGGCCR 1 cut(s) 492
Eam1104I CTCTTC 1 cut(s) 56
Eam1105I GACNNNNNGTC 1 cut(s) 325
EarI CTCTTC 1 cut(s) 56
EciI GGCGGA 1 cut(s) 413
Ecl136II GAGCTC 2 cut(s) 253, 268
Eco24I GRGCYC 3 cut(s) 255, 270, 803
Eco47I GGWCC 5 cut(s) 91, 208, 319, 469, 542
Eco53kI GAGCTC 2 cut(s) 253, 268
Eco57I CTGAAG 1 cut(s) 688
Eco88I CYCGRG 1 cut(s) 712
EcoICRI GAGCTC 2 cut(s) 253, 268
EcoO109I RGGNCCY 2 cut(s) 208, 319
EcoRII CCWGG 4 cut(s) 315, 471, 599, 795
EcoT22I ATGCAT 1 cut(s) 726
EcoT38I GRGCYC 3 cut(s) 255, 270, 803
Esp3I CGTCTC 2 cut(s) 152, 715
FaeI CATG 2 cut(s) 745, 1013
FaiI YATR 6 cut(s) 362, 584, 726, 743, 785, 1011
FalI AAGNNNNNCTT 2 cut(s) 335, 367
FaqI GGGAC 2 cut(s) 83, 313
FatI CATG 2 cut(s) 741, 1009
FauI CCCGC 2 cut(s) 201, 890
Fnu4HI GCNGC 7 cut(s) 60, 380, 413, 416, 461, 812, 917
FokI GGATG 1 cut(s) 407
FriOI GRGCYC 3 cut(s) 255, 270, 803
Fsp4HI GCNGC 7 cut(s) 60, 380, 413, 416, 461, 812, 917
FspBI CTAG 1 cut(s) 815
GlaI GCGC 4 cut(s) 718, 915, 920, 939
GluI GCNGC 7 cut(s) 60, 380, 413, 416, 461, 812, 917
GsuI CTGGAG 1 cut(s) 156
HaeII RGCGCY 1 cut(s) 922
HaeIII GGCC 5 cut(s) 435, 447, 494, 556, 1021
HapII CCGG 2 cut(s) 89, 804
HgaI GACGC 2 cut(s) 622, 697
HhaI GCGC 4 cut(s) 719, 916, 921, 940
Hin1I GRCGYC 1 cut(s) 614
Hin1II CATG 2 cut(s) 745, 1013
Hin6I GCGC 4 cut(s) 717, 914, 919, 938
HinP1I GCGC 4 cut(s) 717, 914, 919, 938
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 344
HinfI GANTC 9 cut(s) 80, 224, 374, 402, 455, 497, 518, 828, 840
HpaII CCGG 2 cut(s) 89, 804
HphI GGTGA 6 cut(s) 28, 58, 169, 823, 871, 973
Hpy166II GTNNAC 2 cut(s) 406, 849
Hpy188I TCNGA 7 cut(s) 79, 250, 401, 508, 561, 666, 839
Hpy188III TCNNGA 7 cut(s) 135, 149, 307, 486, 659, 681, 804
Hpy8I GTNNAC 2 cut(s) 406, 849
Hpy99I CGWCG 6 cut(s) 155, 290, 293, 328, 539, 839
HpyAV CCTTC 4 cut(s) 73, 310, 783, 961
HpyCH4III ACNGT 3 cut(s) 641, 835, 898
HpyCH4V TGCA 3 cut(s) 724, 811, 1009
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 432, 562, 596, 714
Hsp92I GRCGYC 1 cut(s) 614
Hsp92II CATG 2 cut(s) 745, 1013
HspAI GCGC 4 cut(s) 717, 914, 919, 938
Kpn2I TCCGGA 1 cut(s) 803
Kzo9I GATC 6 cut(s) 125, 141, 429, 661, 683, 769
LmnI GCTCC 6 cut(s) 164, 240, 258, 265, 273, 806
Lsp1109I GCAGC 5 cut(s) 391, 399, 472, 823, 928
LweI GCATC 1 cut(s) 552
MaeI CTAG 1 cut(s) 815
MaeIII GTNAC 2 cut(s) 892, 998
MalI GATC 6 cut(s) 127, 143, 431, 663, 685, 771
MbiI CCGCTC 1 cut(s) 159
MboI GATC 6 cut(s) 125, 141, 429, 661, 683, 769
MboII GAAGA 9 cut(s) 43, 208, 211, 343, 640, 643, 694, 976, 1003
MhlI GDGCHC 3 cut(s) 255, 270, 803
MluCI AATT 2 cut(s) 170, 395
MlyI GAGTC 5 cut(s) 368, 411, 464, 506, 527
MmeI TCCRAC 3 cut(s) 108, 817, 960
Mph1103I ATGCAT 1 cut(s) 726
MroI TCCGGA 1 cut(s) 803
MseI TTAA 2 cut(s) 186, 450
MslI CAYNNNNRTG 2 cut(s) 746, 884
MspA1I CMGCKG 2 cut(s) 182, 1029
MspCI CTTAAG 1 cut(s) 449
MspI CCGG 2 cut(s) 89, 804
MspR9I CCNGG 5 cut(s) 89, 317, 473, 601, 797
MteI GCGCNGCGC 1 cut(s) 917
Mva1269I GAATGC 2 cut(s) 813, 872
MvaI CCWGG 4 cut(s) 317, 473, 601, 797
MvnI CGCG 3 cut(s) 196, 230, 885
MwoI GCNNNNNNNGC 5 cut(s) 290, 432, 562, 596, 714
NciI CCSGG 1 cut(s) 89
NdeII GATC 6 cut(s) 125, 141, 429, 661, 683, 769
NlaIII CATG 2 cut(s) 745, 1013
NlaIV GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
NmeAIII GCCGAG 1 cut(s) 520
NsiI ATGCAT 1 cut(s) 726
NspI RCATGY 2 cut(s) 745, 1013
NspV TTCGAA 1 cut(s) 901
OliI CACNNNNGTG 1 cut(s) 884
PaeI GCATGC 1 cut(s) 1013
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 2 cut(s) 813, 872
PfeI GAWTC 4 cut(s) 80, 224, 828, 840
PflFI GACNNNGTC 1 cut(s) 95
PflMI CCANNNNNTGG 1 cut(s) 600
PkrI GCNGC 7 cut(s) 61, 381, 414, 417, 462, 813, 918
PleI GAGTC 5 cut(s) 368, 410, 463, 505, 526
PpsI GAGTC 5 cut(s) 368, 410, 463, 505, 526
PpuMI RGGWCCY 2 cut(s) 208, 319
Psp124BI GAGCTC 2 cut(s) 255, 270
Psp5II RGGWCCY 2 cut(s) 208, 319
Psp6I CCWGG 4 cut(s) 315, 471, 599, 795
PspGI CCWGG 4 cut(s) 315, 471, 599, 795
PspN4I GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
PspPI GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
PspPPI RGGWCCY 2 cut(s) 208, 319
PsyI GACNNNGTC 1 cut(s) 95
PvuII CAGCTG 1 cut(s) 1029
RsaI GTAC 1 cut(s) 848
RsaNI GTAC 1 cut(s) 847
RseI CAYNNNNRTG 2 cut(s) 746, 884
SacI GAGCTC 2 cut(s) 255, 270
SaqAI TTAA 2 cut(s) 186, 450
SatI GCNGC 7 cut(s) 60, 380, 413, 416, 461, 812, 917
Sau3AI GATC 6 cut(s) 125, 141, 429, 661, 683, 769
Sau96I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
SchI GAGTC 5 cut(s) 368, 411, 464, 506, 527
ScrFI CCNGG 5 cut(s) 89, 317, 473, 601, 797
SduI GDGCHC 3 cut(s) 255, 270, 803
SfaNI GCATC 1 cut(s) 552
SfuI TTCGAA 1 cut(s) 901
SinI GGWCC 5 cut(s) 91, 208, 319, 469, 542
SmiMI CAYNNNNRTG 2 cut(s) 746, 884
SmlI CTYRAG 2 cut(s) 260, 449
SmoI CTYRAG 2 cut(s) 260, 449
SphI GCATGC 1 cut(s) 1013
Sse9I AATT 2 cut(s) 170, 395
SspMI CTAG 1 cut(s) 815
SstI GAGCTC 2 cut(s) 255, 270
StyD4I CCNGG 5 cut(s) 87, 315, 471, 599, 795
TaaI ACNGT 3 cut(s) 641, 835, 898
TaqI TCGA 6 cut(s) 150, 222, 306, 369, 516, 901
TasI AATT 2 cut(s) 170, 395
TatI WGTACW 1 cut(s) 846
TauI GCSGC 2 cut(s) 62, 418
TfiI GAWTC 4 cut(s) 80, 224, 828, 840
Tru1I TTAA 2 cut(s) 186, 450
Tru9I TTAA 2 cut(s) 186, 450
TscAI CASTG 1 cut(s) 646
TseI GCWGC 5 cut(s) 379, 412, 460, 811, 916
TspDTI ATGAA 4 cut(s) 292, 502, 610, 682
TspGWI ACGGA 1 cut(s) 134
TspRI CASTG 1 cut(s) 646
Tth111I GACNNNGTC 1 cut(s) 95
Van91I CCANNNNNTGG 1 cut(s) 600
Vha464I CTTAAG 1 cut(s) 449
VpaK11BI GGWCC 5 cut(s) 91, 208, 319, 469, 542
XapI RAATTY 1 cut(s) 170
XceI RCATGY 2 cut(s) 745, 1013
XcmI CCANNNNNNNNNTGG 2 cut(s) 535, 601
XspI CTAG 1 cut(s) 815
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.