Prupe.4G025400_v2.0.a1

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1200807 .. 1202615
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G025400.1

Sequence Viewer

Length: 1038 bp
ATGGGACCAATTCCGAAACTACCCCTTGTCTTTCTCATCACCACCCTCCTCTTTCTCACCGCATTCATTGGGTTATCCGAATCCAACTCGGACCAGGTCGCCGAACTCCTTTCCCTCCAAGCCCGATCCAAATCTGGCTTGATCCGCCTCGACGATCACTCACTCTCTCGATTTCTGACCTCCGTCAAAACCCCAAGGCCCTACTGGGTTCTCATCTTCTTCGACGCCGCAAAGCTCCACGACAAGCATGAGCTCCATCTCAAGGAGCTCCGCAGCGAGTTCGCTCTCGTCGCTTCGTCTTTCATCGAGAACAATGAAGACCCATCGTCTTCTTCTCACGCCAAGTTGTTCTTCTGCGACATCGAGTTTCAAGACTCGCAGCACAGCTTTGCCCAATTCGGAGTCAACTCGCTGCCTCACATTCGCCTCATCGGACCCAACCACAGCCTCAAAGAATCCCAGCAAATGGACCAGGGCGATTTCTCGAGATTGGCTGAGTCAATGTCCGAGTTCATCGAGTCCAAGACCAAACTCGTCGTGGGTCCGATTCAGCGCCCTCCGATGATATCCAAGAAGCAAATTATGTTCGCTACCATCGCGTGGTTGATTTGGTTACCCTTTATTGGGAAGAAGATCATCAGTGGCAAGACTTTGCTTCACGACCCAAGAATTTGGTTATCTGGGGCTGTCTTCATTTACTTCTTTAGCGTCTCGGGCGCTATGCATAACATCATTAGAAAAATGCCCATGTTCTTGGTTGATAGAAATGACCCTTCAAAGCTCATATTTTTCTACCAGGGCTCCGGAATGCAGCTTGGAACAGAAGGCTTCACAGTTGGGTTCTTGTACACCATTGTTGGGTTGTTGTTGGCATTCCTCACCCGCGTGCTTGTTACCGTCCGCAATGTCAAGGTGCAGCGTATTGTTATGATTATCGCGCTCCTTGTTTCGTTTTGGGCGGTGAAGAAGGTGGTCTACTTGGATAATTGGAAGACCGGTTATGGAGTGCATGCTTTTTGGCCTTCGAGTTGGAACTGA

Protein Analysis

346

Amino Acids

39.19

Weight (kDa)

9.48

Isoelectric Point (pI)

37.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013991)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 466, 600
AccI GTMKAC 1 cut(s) 975
AccII CGCG 3 cut(s) 599, 885, 938
AccIII TCCGGA 1 cut(s) 803
AciI CCGC 7 cut(s) 60, 145, 228, 271, 883, 901, 959
AclWI GGATC 2 cut(s) 120, 136
AcsI RAATTY 1 cut(s) 669
AcyI GRCGYC 1 cut(s) 225
AfaI GTAC 1 cut(s) 848
AfiI CCNNNNNNNGG 6 cut(s) 262, 466, 600, 623, 624, 858
AgeI ACCGGT 1 cut(s) 995
AgsI TTSAA 2 cut(s) 371, 777
AhdI GACNNNNNGTC 1 cut(s) 325
AjnI CCWGG 3 cut(s) 93, 471, 795
AjuI GAANNNNNNNTTGG 2 cut(s) 335, 367
AleI CACNNNNGTG 1 cut(s) 884
AluBI AGCT 6 cut(s) 235, 253, 268, 387, 781, 814
AluI AGCT 6 cut(s) 235, 253, 268, 387, 781, 814
Alw21I GWGCWC 2 cut(s) 255, 270
Alw26I GTCTC 1 cut(s) 715
AlwI GGATC 2 cut(s) 120, 136
Ama87I CYCGRG 2 cut(s) 484, 712
Aor13HI TCCGGA 1 cut(s) 803
AoxI GGCC 2 cut(s) 197, 1019
ApeKI GCWGC 5 cut(s) 273, 379, 412, 811, 916
ApoI RAATTY 1 cut(s) 669
AsiGI ACCGGT 1 cut(s) 995
AspLEI GCGC 3 cut(s) 555, 719, 940
AspS9I GGNCC 6 cut(s) 5, 91, 198, 434, 469, 542
AsuHPI GGTGA 4 cut(s) 31, 49, 871, 973
AvaI CYCGRG 2 cut(s) 484, 712
AvaII GGWCC 5 cut(s) 5, 91, 434, 469, 542
BanII GRGCYC 3 cut(s) 255, 270, 803
BarI GAAGNNNNNNTAC 2 cut(s) 959, 991
BbsI GAAGAC 4 cut(s) 321, 324, 682, 998
Bbv12I GWGCWC 2 cut(s) 255, 270
BbvI GCAGC 5 cut(s) 285, 391, 399, 823, 928
BccI CCATC 3 cut(s) 264, 331, 602
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BciT130I CCWGG 3 cut(s) 95, 473, 797
BcoDI GTCTC 1 cut(s) 715
BfoI RGCGCY 2 cut(s) 556, 720
BisI GCNGC 6 cut(s) 228, 274, 380, 413, 812, 917
BlsI GCNGC 6 cut(s) 229, 275, 381, 414, 813, 918
Bme1390I CCNGG 3 cut(s) 95, 473, 797
Bme18I GGWCC 5 cut(s) 5, 91, 434, 469, 542
BmeRI GACNNNNNGTC 1 cut(s) 325
BmeT110I CYCGRG 2 cut(s) 484, 712
BmgT120I GGNCC 6 cut(s) 5, 91, 198, 434, 469, 542
BmiI GGNNCC 4 cut(s) 6, 436, 543, 802
BmrFI CCNGG 3 cut(s) 95, 473, 797
BmrI ACTGGG 1 cut(s) 214
BmuI ACTGGG 1 cut(s) 214
BoxI GACNNNNGTC 1 cut(s) 182
BpiI GAAGAC 4 cut(s) 321, 324, 682, 998
BpuEI CTTGAG 1 cut(s) 245
BsaBI GATNNNNATC 1 cut(s) 130
BsaHI GRCGYC 1 cut(s) 225
BsaJI CCNNGG 3 cut(s) 194, 472, 796
BsaWI WCCGGW 2 cut(s) 803, 995
BsaXI ACNNNNNCTCC 2 cut(s) 785, 815
Bsc4I CCNNNNNNNGG 6 cut(s) 262, 466, 600, 623, 624, 858
Bse118I RCCGGY 1 cut(s) 995
Bse1I ACTGG 1 cut(s) 209
Bse3DI GCAATG 1 cut(s) 910
Bse8I GATNNNNATC 1 cut(s) 130
BseAI TCCGGA 1 cut(s) 803
BseBI CCWGG 3 cut(s) 95, 473, 797
BseDI CCNNGG 3 cut(s) 194, 472, 796
BseJI GATNNNNATC 1 cut(s) 130
BseLI CCNNNNNNNGG 6 cut(s) 262, 466, 600, 623, 624, 858
BseMI GCAATG 1 cut(s) 910
BseMII CTCAG 1 cut(s) 486
BseNI ACTGG 1 cut(s) 209
BseRI GAGGAG 1 cut(s) 38
BseXI GCAGC 5 cut(s) 285, 391, 399, 823, 928
BseYI CCCAGC 1 cut(s) 459
BsgI GTGCAG 1 cut(s) 935
Bsh1236I CGCG 3 cut(s) 599, 885, 938
BshFI GGCC 2 cut(s) 199, 1021
BshTI ACCGGT 1 cut(s) 995
BsiHKAI GWGCWC 2 cut(s) 255, 270
BsiHKCI CYCGRG 2 cut(s) 484, 712
BsiSI CCGG 2 cut(s) 804, 996
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 6 cut(s) 262, 466, 600, 623, 624, 858
BsmAI GTCTC 1 cut(s) 715
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 3 cut(s) 62, 813, 872
BsnI GGCC 2 cut(s) 199, 1021
BsoBI CYCGRG 2 cut(s) 484, 712
Bsp1286I GDGCHC 3 cut(s) 255, 270, 803
Bsp13I TCCGGA 1 cut(s) 803
Bsp1407I TGTACA 1 cut(s) 846
Bsp143I GATC 4 cut(s) 125, 141, 154, 633
BspACI CCGC 7 cut(s) 60, 145, 228, 271, 883, 901, 959
BspANI GGCC 2 cut(s) 199, 1021
BspCNI CTCAG 1 cut(s) 487
BspEI TCCGGA 1 cut(s) 803
BspFNI CGCG 3 cut(s) 599, 885, 938
BspLI GGNNCC 4 cut(s) 6, 436, 543, 802
BspPI GGATC 2 cut(s) 120, 136
BsrDI GCAATG 1 cut(s) 910
BsrFI RCCGGY 1 cut(s) 995
BsrGI TGTACA 1 cut(s) 846
BsrI ACTGG 1 cut(s) 209
BssAI RCCGGY 1 cut(s) 995
BssECI CCNNGG 3 cut(s) 194, 472, 796
BssMI GATC 4 cut(s) 125, 141, 154, 633
BssNI GRCGYC 1 cut(s) 225
BssT1I CCWWGG 1 cut(s) 194
Bst2UI CCWGG 3 cut(s) 95, 473, 797
Bst4CI ACNGT 2 cut(s) 835, 898
BstACI GRCGYC 1 cut(s) 225
BstAUI TGTACA 1 cut(s) 846
BstC8I GCNNGC 2 cut(s) 887, 1011
BstDEI CTNAG 1 cut(s) 495
BstEII GGTNACC 1 cut(s) 612
BstFNI CGCG 3 cut(s) 599, 885, 938
BstH2I RGCGCY 2 cut(s) 556, 720
BstHHI GCGC 3 cut(s) 555, 719, 940
BstKTI GATC 4 cut(s) 128, 144, 157, 636
BstMAI GTCTC 1 cut(s) 715
BstMBI GATC 4 cut(s) 125, 141, 154, 633
BstMWI GCNNNNNNNGC 4 cut(s) 144, 290, 596, 714
BstNI CCWGG 3 cut(s) 95, 473, 797
BstNSI RCATGY 1 cut(s) 1013
BstPAI GACNNNNGTC 1 cut(s) 182
BstPI GGTNACC 1 cut(s) 612
BstSCI CCNGG 3 cut(s) 93, 471, 795
BstUI CGCG 3 cut(s) 599, 885, 938
BstV1I GCAGC 5 cut(s) 285, 391, 399, 823, 928
BstV2I GAAGAC 4 cut(s) 321, 324, 682, 998
BstXI CCANNNNNNTGG 2 cut(s) 672, 754
BsuRI GGCC 2 cut(s) 199, 1021
BtgZI GCGATG 1 cut(s) 580
BtsIMutI CAGTG 1 cut(s) 646
Cac8I GCNNGC 2 cut(s) 887, 1011
CfoI GCGC 3 cut(s) 555, 719, 940
Cfr10I RCCGGY 1 cut(s) 995
Cfr13I GGNCC 6 cut(s) 5, 91, 198, 434, 469, 542
CseI GACGC 2 cut(s) 233, 697
CsiI ACCWGGT 1 cut(s) 93
Csp6I GTAC 1 cut(s) 847
CspAI ACCGGT 1 cut(s) 995
CviAII CATG 3 cut(s) 248, 748, 1010
CviQI GTAC 1 cut(s) 847
DdeI CTNAG 1 cut(s) 495
DpnI GATC 4 cut(s) 127, 143, 156, 635
DpnII GATC 4 cut(s) 125, 141, 154, 633
DriI GACNNNNNGTC 1 cut(s) 325
Eam1105I GACNNNNNGTC 1 cut(s) 325
EciI GGCGGA 1 cut(s) 134
Ecl136II GAGCTC 2 cut(s) 253, 268
Eco130I CCWWGG 1 cut(s) 194
Eco24I GRGCYC 3 cut(s) 255, 270, 803
Eco32I GATATC 1 cut(s) 567
Eco47I GGWCC 5 cut(s) 5, 91, 434, 469, 542
Eco53kI GAGCTC 2 cut(s) 253, 268
Eco88I CYCGRG 2 cut(s) 484, 712
Eco91I GGTNACC 1 cut(s) 612
EcoICRI GAGCTC 2 cut(s) 253, 268
EcoO109I RGGNCCY 1 cut(s) 198
EcoO65I GGTNACC 1 cut(s) 612
EcoRII CCWGG 3 cut(s) 93, 471, 795
EcoRV GATATC 1 cut(s) 567
EcoT14I CCWWGG 1 cut(s) 194
EcoT22I ATGCAT 1 cut(s) 726
EcoT38I GRGCYC 3 cut(s) 255, 270, 803
ErhI CCWWGG 1 cut(s) 194
Esp3I CGTCTC 1 cut(s) 715
FaeI CATG 3 cut(s) 251, 751, 1013
FaiI YATR 9 cut(s) 249, 584, 722, 726, 749, 785, 929, 1002, 1011
FalI AAGNNNNNCTT 2 cut(s) 335, 367
FaqI GGGAC 1 cut(s) 18
FatI CATG 3 cut(s) 247, 747, 1009
FauI CCCGC 1 cut(s) 890
FblI GTMKAC 1 cut(s) 975
Fnu4HI GCNGC 6 cut(s) 228, 274, 380, 413, 812, 917
FriOI GRGCYC 3 cut(s) 255, 270, 803
Fsp4HI GCNGC 6 cut(s) 228, 274, 380, 413, 812, 917
GlaI GCGC 3 cut(s) 554, 718, 939
GluI GCNGC 6 cut(s) 228, 274, 380, 413, 812, 917
GsaI CCCAGC 1 cut(s) 463
HaeII RGCGCY 2 cut(s) 556, 720
HaeIII GGCC 2 cut(s) 199, 1021
HapII CCGG 2 cut(s) 804, 996
HgaI GACGC 2 cut(s) 233, 697
HhaI GCGC 3 cut(s) 555, 719, 940
Hin1I GRCGYC 1 cut(s) 225
Hin1II CATG 3 cut(s) 251, 751, 1013
Hin6I GCGC 3 cut(s) 553, 717, 938
HinP1I GCGC 3 cut(s) 553, 717, 938
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HinfI GANTC 7 cut(s) 80, 374, 402, 455, 497, 518, 547
HpaII CCGG 2 cut(s) 804, 996
HphI GGTGA 4 cut(s) 31, 49, 871, 973
Hpy166II GTNNAC 3 cut(s) 406, 849, 976
Hpy188I TCNGA 9 cut(s) 15, 79, 91, 177, 401, 434, 508, 546, 561
Hpy188III TCNNGA 7 cut(s) 168, 307, 371, 484, 486, 659, 804
Hpy8I GTNNAC 3 cut(s) 406, 849, 976
Hpy99I CGWCG 4 cut(s) 155, 227, 293, 539
HpyAV CCTTC 4 cut(s) 783, 818, 961, 1032
HpyCH4III ACNGT 2 cut(s) 835, 898
HpyCH4V TGCA 4 cut(s) 724, 811, 916, 1009
HpyF10VI GCNNNNNNNGC 4 cut(s) 144, 290, 596, 714
HpyF3I CTNAG 1 cut(s) 495
Hsp92I GRCGYC 1 cut(s) 225
Hsp92II CATG 3 cut(s) 251, 751, 1013
HspAI GCGC 3 cut(s) 553, 717, 938
Kpn2I TCCGGA 1 cut(s) 803
Kzo9I GATC 4 cut(s) 125, 141, 154, 633
LmnI GCTCC 6 cut(s) 240, 258, 265, 273, 806, 945
Lsp1109I GCAGC 5 cut(s) 285, 391, 399, 823, 928
MabI ACCWGGT 1 cut(s) 93
MaeIII GTNAC 2 cut(s) 612, 892
MalI GATC 4 cut(s) 127, 143, 156, 635
MboI GATC 4 cut(s) 125, 141, 154, 633
MhlI GDGCHC 3 cut(s) 255, 270, 803
MluCI AATT 5 cut(s) 9, 395, 579, 669, 985
MlyI GAGTC 4 cut(s) 368, 411, 506, 527
MmeI TCCRAC 2 cut(s) 108, 1010
Mph1103I ATGCAT 1 cut(s) 726
MroI TCCGGA 1 cut(s) 803
MslI CAYNNNNRTG 1 cut(s) 884
MspI CCGG 2 cut(s) 804, 996
MspR9I CCNGG 3 cut(s) 95, 473, 797
Mva1269I GAATGC 3 cut(s) 62, 813, 872
MvaI CCWGG 3 cut(s) 95, 473, 797
MvnI CGCG 3 cut(s) 599, 885, 938
MwoI GCNNNNNNNGC 4 cut(s) 144, 290, 596, 714
NdeII GATC 4 cut(s) 125, 141, 154, 633
NlaIII CATG 3 cut(s) 251, 751, 1013
NlaIV GGNNCC 4 cut(s) 6, 436, 543, 802
NsiI ATGCAT 1 cut(s) 726
NspI RCATGY 1 cut(s) 1013
OliI CACNNNNGTG 1 cut(s) 884
PaeI GCATGC 1 cut(s) 1013
PaeR7I CTCGAG 1 cut(s) 484
PctI GAATGC 3 cut(s) 62, 813, 872
PfeI GAWTC 3 cut(s) 80, 455, 547
PflFI GACNNNGTC 1 cut(s) 95
PflMI CCANNNNNTGG 2 cut(s) 466, 600
PinAI ACCGGT 1 cut(s) 995
PkrI GCNGC 6 cut(s) 229, 275, 381, 414, 813, 918
PleI GAGTC 4 cut(s) 368, 410, 505, 526
PpsI GAGTC 4 cut(s) 368, 410, 505, 526
PshAI GACNNNNGTC 1 cut(s) 182
Psp124BI GAGCTC 2 cut(s) 255, 270
Psp6I CCWGG 3 cut(s) 93, 471, 795
PspEI GGTNACC 1 cut(s) 612
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 3 cut(s) 93, 471, 795
PspN4I GGNNCC 4 cut(s) 6, 436, 543, 802
PspPI GGNCC 6 cut(s) 5, 91, 198, 434, 469, 542
PsyI GACNNNGTC 1 cut(s) 95
RsaI GTAC 1 cut(s) 848
RsaNI GTAC 1 cut(s) 847
RseI CAYNNNNRTG 1 cut(s) 884
SacI GAGCTC 2 cut(s) 255, 270
SatI GCNGC 6 cut(s) 228, 274, 380, 413, 812, 917
Sau3AI GATC 4 cut(s) 125, 141, 154, 633
Sau96I GGNCC 6 cut(s) 5, 91, 198, 434, 469, 542
SchI GAGTC 4 cut(s) 368, 411, 506, 527
ScrFI CCNGG 3 cut(s) 95, 473, 797
SduI GDGCHC 3 cut(s) 255, 270, 803
SexAI ACCWGGT 1 cut(s) 93
Sfr274I CTCGAG 1 cut(s) 484
SinI GGWCC 5 cut(s) 5, 91, 434, 469, 542
SlaI CTCGAG 1 cut(s) 484
SmiMI CAYNNNNRTG 1 cut(s) 884
SmlI CTYRAG 2 cut(s) 260, 484
SmoI CTYRAG 2 cut(s) 260, 484
SphI GCATGC 1 cut(s) 1013
Sse9I AATT 5 cut(s) 9, 395, 579, 669, 985
SsiI CCGC 7 cut(s) 60, 145, 228, 271, 883, 901, 959
SstI GAGCTC 2 cut(s) 255, 270
StyD4I CCNGG 3 cut(s) 93, 471, 795
StyI CCWWGG 1 cut(s) 194
TaaI ACNGT 2 cut(s) 835, 898
TaqI TCGA 8 cut(s) 150, 169, 222, 306, 363, 485, 516, 1025
TasI AATT 5 cut(s) 9, 395, 579, 669, 985
TatI WGTACW 1 cut(s) 846
TauI GCSGC 1 cut(s) 230
TfiI GAWTC 3 cut(s) 80, 455, 547
TscAI CASTG 1 cut(s) 646
TseI GCWGC 5 cut(s) 273, 379, 412, 811, 916
TspDTI ATGAA 5 cut(s) 55, 292, 330, 502, 682
TspGWI ACGGA 1 cut(s) 172
TspRI CASTG 1 cut(s) 646
Tth111I GACNNNGTC 1 cut(s) 95
Van91I CCANNNNNTGG 2 cut(s) 466, 600
VpaK11BI GGWCC 5 cut(s) 5, 91, 434, 469, 542
XapI RAATTY 1 cut(s) 669
XceI RCATGY 1 cut(s) 1013
XcmI CCANNNNNNNNNTGG 2 cut(s) 201, 535
XhoI CTCGAG 1 cut(s) 484
XmiI GTMKAC 1 cut(s) 975
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.