pycom10g26740

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
27967036 .. 27968208
1173 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g26740.2

Sequence Viewer

Length: 1119 bp
ATGTCGCATACTCTAGCCTTCTCATCTTCCACGCTAAAAAGGCAACACTCTAAGACTGAAAATCAACTATCTACCTCCGGAGGCTGCTTCTTCCTCTTCCCACAAAGCAAAACCCTCCCTGCAAAAATTGAACCCCCAAAAATGGGTTCAATTCCGAAACTACCCCTCCTCCTCCTCACCACCGTCTTCCTTCTCCTCGCCGCCTTCACCGAGTTATCCGAATCCAACCCGGTCCCCGAACTCCTCTCCCTCCAATCCCGATCCAGTTCTGGGGTGATCCGCCTCGACGAACGCTCCCTCGCCCAATTCCTAACCGGCGTCAAAACCCCGCGACCCTACTGGGTCCTCGTCTTCTTTGATGCTGCGAAGCTCCACGACAAGTCGGACGAGAACAACCAGGACCCGTCGTCCCCCTCCCACGCCAAGCTCTTCTTCTGCGACATCGAGTTCCAGGAGTCGCAGCACAGCTTCGCCCAATTCGGAGTCAACTCGCTGCCGCATATCCGCCTGATCGGCCCCACCCACGGCCTGAAGGAGTCGCAGCAGATGGACCAGGGCGATTTCTCCCGATTGGCCGAGTCAATGTCCGAGTTCATCGAGTCCAAGACCAAACTCGTCGTGGGTCCGATCCATCGGCCTCCGATGCTGTCCAAGAACCAGATTATGTTCGTCACCATTGCCTGGCTGATTTGCATGCCGTTCATTGCGAAGAAGGTTTACAGTGGCAAGACATTGCTTCACGATCCGAGGATTTGGCTATCGGGGTCGGTTTTTGTTTACTTCTTCAGCGTCTCGGGCGCAATGCATAACATCATTAGGAACATGCCCATGTTTTTGGTTGATAGGGAGGATCCTTCCAAGCTCATATTTTTCTACCAGGGCTCCGGAATGCAGCTCGGAACAGAGGGGTTCACTGTCGGATTCTTGTACACCATTGTCGGGTTGTTGCTGGCATTCCTCACCCGCGTGCTTGTTACGGTTCGCAGTGTCAAGGTGCAGCGCATTGTGATGATTATTTCACTGTTTGTTTCGTTCTTGGCGGTGAAGAAGGTGATCCAGTTGGATAACTGGAAGACGGGTTACGGGGTGCATGCTTTTTGGCCTACGAGCTGGAACTGA

Protein Analysis

373

Amino Acids

41.88

Weight (kDa)

9.42

Isoelectric Point (pI)

47.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013991)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 681
AccII CGCG 2 cut(s) 331, 966
AccIII TCCGGA 2 cut(s) 77, 884
AciI CCGC 7 cut(s) 201, 280, 329, 497, 505, 964, 1040
AclWI GGATC 7 cut(s) 255, 271, 622, 737, 845, 858, 1048
AcoI YGGCCR 1 cut(s) 573
AcuI CTGAAG 2 cut(s) 551, 769
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 1 cut(s) 929
AfiI CCNNNNNNNGG 6 cut(s) 142, 143, 270, 524, 681, 939
AgsI TTSAA 2 cut(s) 131, 150
AhdI GACNNNNNGTC 1 cut(s) 406
AjnI CCWGG 5 cut(s) 396, 450, 552, 680, 876
AjuI GAANNNNNNNTTGG 4 cut(s) 130, 162, 416, 448
AleI CACNNNNGTG 1 cut(s) 965
AluBI AGCT 6 cut(s) 370, 427, 468, 862, 895, 1110
AluI AGCT 6 cut(s) 370, 427, 468, 862, 895, 1110
Alw26I GTCTC 1 cut(s) 796
AlwI GGATC 7 cut(s) 255, 271, 622, 737, 845, 858, 1048
Ama87I CYCGRG 1 cut(s) 793
Aor13HI TCCGGA 2 cut(s) 77, 884
AoxI GGCC 5 cut(s) 514, 526, 573, 635, 1100
ApeKI GCWGC 7 cut(s) 84, 362, 460, 493, 541, 892, 997
AspLEI GCGC 2 cut(s) 800, 1002
AspS9I GGNCC 6 cut(s) 232, 343, 400, 515, 550, 623
AsuC2I CCSGG 1 cut(s) 230
AsuHPI GGTGA 7 cut(s) 169, 199, 286, 664, 952, 1054, 1063
AvaI CYCGRG 1 cut(s) 793
AvaII GGWCC 5 cut(s) 232, 343, 400, 550, 623
BamHI GGATCC 1 cut(s) 850
BanII GRGCYC 1 cut(s) 884
BarI GAAGNNNNNNTAC 4 cut(s) 701, 733, 1064, 1096
BbsI GAAGAC 3 cut(s) 178, 343, 1079
BbvI GCAGC 7 cut(s) 71, 349, 472, 480, 553, 904, 1009
BccI CCATC 2 cut(s) 541, 639
BceAI ACGGC 2 cut(s) 541, 682
BciT130I CCWGG 5 cut(s) 398, 452, 554, 682, 878
BcnI CCSGG 1 cut(s) 230
BcoDI GTCTC 1 cut(s) 796
BfaI CTAG 1 cut(s) 14
BglI GCCNNNNNGGC 1 cut(s) 513
BisI GCNGC 9 cut(s) 85, 201, 363, 461, 494, 497, 542, 893, 998
BlsI GCNGC 9 cut(s) 86, 202, 364, 462, 495, 498, 543, 894, 999
Bme1390I CCNGG 6 cut(s) 230, 398, 452, 554, 682, 878
Bme18I GGWCC 5 cut(s) 232, 343, 400, 550, 623
BmeRI GACNNNNNGTC 1 cut(s) 406
BmeT110I CYCGRG 1 cut(s) 793
BmgT120I GGNCC 6 cut(s) 232, 343, 400, 515, 550, 623
BmiI GGNNCC 7 cut(s) 234, 344, 402, 517, 624, 852, 883
BmrFI CCNGG 6 cut(s) 230, 398, 452, 554, 682, 878
BmrI ACTGGG 1 cut(s) 349
BmsI GCATC 2 cut(s) 349, 633
BmuI ACTGGG 1 cut(s) 349
BpiI GAAGAC 3 cut(s) 178, 343, 1079
BpuMI CCSGG 1 cut(s) 230
BsaHI GRCGYC 1 cut(s) 318
BsaJI CCNNGG 4 cut(s) 523, 553, 746, 877
BsaWI WCCGGW 2 cut(s) 77, 884
BsaXI ACNNNNNCTCC 8 cut(s) 150, 153, 180, 183, 278, 308, 866, 896
Bsc4I CCNNNNNNNGG 6 cut(s) 142, 143, 270, 524, 681, 939
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 4 cut(s) 264, 344, 1057, 1073
Bse3DI GCAATG 4 cut(s) 675, 702, 731, 807
BseAI TCCGGA 2 cut(s) 77, 884
BseBI CCWGG 5 cut(s) 398, 452, 554, 682, 878
BseDI CCNNGG 4 cut(s) 523, 553, 746, 877
BseLI CCNNNNNNNGG 6 cut(s) 142, 143, 270, 524, 681, 939
BseMI GCAATG 4 cut(s) 675, 702, 731, 807
BseNI ACTGG 4 cut(s) 264, 344, 1057, 1073
BseRI GAGGAG 5 cut(s) 158, 161, 164, 185, 233
BseXI GCAGC 7 cut(s) 71, 349, 472, 480, 553, 904, 1009
BsgI GTGCAG 1 cut(s) 1016
Bsh1236I CGCG 2 cut(s) 331, 966
BshFI GGCC 5 cut(s) 516, 528, 575, 637, 1102
BsiHKCI CYCGRG 1 cut(s) 793
BsiSI CCGG 4 cut(s) 78, 230, 315, 885
BslFI GGGAC 2 cut(s) 218, 394
BslI CCNNNNNNNGG 6 cut(s) 142, 143, 270, 524, 681, 939
BsmAI GTCTC 1 cut(s) 796
BsmBI CGTCTC 1 cut(s) 796
BsmFI GGGAC 2 cut(s) 218, 394
BsmI GAATGC 2 cut(s) 894, 953
BsnI GGCC 5 cut(s) 516, 528, 575, 637, 1102
BsoBI CYCGRG 1 cut(s) 793
Bsp1286I GDGCHC 1 cut(s) 884
Bsp13I TCCGGA 2 cut(s) 77, 884
Bsp1407I TGTACA 1 cut(s) 927
Bsp143I GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
BspACI CCGC 7 cut(s) 201, 280, 329, 497, 505, 964, 1040
BspANI GGCC 5 cut(s) 516, 528, 575, 637, 1102
BspEI TCCGGA 2 cut(s) 77, 884
BspFNI CGCG 2 cut(s) 331, 966
BspLI GGNNCC 7 cut(s) 234, 344, 402, 517, 624, 852, 883
BspPI GGATC 7 cut(s) 255, 271, 622, 737, 845, 858, 1048
BspQI GCTCTTC 1 cut(s) 434
BsrDI GCAATG 4 cut(s) 675, 702, 731, 807
BsrFI RCCGGY 1 cut(s) 314
BsrGI TGTACA 1 cut(s) 927
BsrI ACTGG 4 cut(s) 264, 344, 1057, 1073
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 4 cut(s) 523, 553, 746, 877
BssMI GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
BssNI GRCGYC 1 cut(s) 318
Bst2UI CCWGG 5 cut(s) 398, 452, 554, 682, 878
Bst4CI ACNGT 5 cut(s) 184, 722, 916, 979, 1023
Bst6I CTCTTC 2 cut(s) 101, 434
BstACI GRCGYC 1 cut(s) 318
BstAUI TGTACA 1 cut(s) 927
BstC8I GCNNGC 4 cut(s) 695, 951, 968, 1092
BstDEI CTNAG 1 cut(s) 51
BstDSI CCRYGG 1 cut(s) 523
BstFNI CGCG 2 cut(s) 331, 966
BstHHI GCGC 2 cut(s) 800, 1002
BstKTI GATC 7 cut(s) 263, 279, 513, 630, 745, 853, 1056
BstMAI GTCTC 1 cut(s) 796
BstMBI GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
BstMWI GCNNNNNNNGC 4 cut(s) 40, 513, 643, 795
BstNI CCWGG 5 cut(s) 398, 452, 554, 682, 878
BstNSI RCATGY 3 cut(s) 697, 826, 1094
BstSCI CCNGG 6 cut(s) 228, 396, 450, 552, 680, 876
BstUI CGCG 2 cut(s) 331, 966
BstV1I GCAGC 7 cut(s) 71, 349, 472, 480, 553, 904, 1009
BstV2I GAAGAC 3 cut(s) 178, 343, 1079
BstX2I RGATCY 1 cut(s) 850
BstXI CCANNNNNNTGG 1 cut(s) 835
BstYI RGATCY 1 cut(s) 850
BsuRI GGCC 5 cut(s) 516, 528, 575, 637, 1102
BtgI CCRYGG 1 cut(s) 523
BtsI GCAGTG 1 cut(s) 991
BtsIMutI CAGTG 4 cut(s) 727, 912, 991, 1019
Cac8I GCNNGC 4 cut(s) 695, 951, 968, 1092
CfoI GCGC 2 cut(s) 800, 1002
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 6 cut(s) 232, 343, 400, 515, 550, 623
CseI GACGC 2 cut(s) 307, 778
Csp6I GTAC 1 cut(s) 928
CviAII CATG 4 cut(s) 694, 823, 829, 1091
CviQI GTAC 1 cut(s) 928
DdeI CTNAG 1 cut(s) 51
DpnI GATC 7 cut(s) 262, 278, 512, 629, 744, 852, 1055
DpnII GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
DriI GACNNNNNGTC 1 cut(s) 406
EaeI YGGCCR 1 cut(s) 573
Eam1104I CTCTTC 2 cut(s) 101, 434
Eam1105I GACNNNNNGTC 1 cut(s) 406
EarI CTCTTC 2 cut(s) 101, 434
EciI GGCGGA 2 cut(s) 269, 494
Eco24I GRGCYC 1 cut(s) 884
Eco47I GGWCC 5 cut(s) 232, 343, 400, 550, 623
Eco57I CTGAAG 2 cut(s) 551, 769
Eco88I CYCGRG 1 cut(s) 793
EcoO109I RGGNCCY 2 cut(s) 343, 400
EcoRII CCWGG 5 cut(s) 396, 450, 552, 680, 876
EcoT22I ATGCAT 1 cut(s) 807
EcoT38I GRGCYC 1 cut(s) 884
Esp3I CGTCTC 1 cut(s) 796
FaeI CATG 4 cut(s) 697, 826, 832, 1094
FaiI YATR 9 cut(s) 9, 501, 665, 695, 807, 824, 830, 866, 1092
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FaqI GGGAC 2 cut(s) 218, 394
FatI CATG 4 cut(s) 693, 822, 828, 1090
FauI CCCGC 2 cut(s) 336, 971
Fnu4HI GCNGC 9 cut(s) 85, 201, 363, 461, 494, 497, 542, 893, 998
FriOI GRGCYC 1 cut(s) 884
Fsp4HI GCNGC 9 cut(s) 85, 201, 363, 461, 494, 497, 542, 893, 998
FspBI CTAG 1 cut(s) 14
GlaI GCGC 2 cut(s) 799, 1001
GluI GCNGC 9 cut(s) 85, 201, 363, 461, 494, 497, 542, 893, 998
HaeIII GGCC 5 cut(s) 516, 528, 575, 637, 1102
HapII CCGG 4 cut(s) 78, 230, 315, 885
HgaI GACGC 2 cut(s) 307, 778
HhaI GCGC 2 cut(s) 800, 1002
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 4 cut(s) 697, 826, 832, 1094
Hin6I GCGC 2 cut(s) 798, 1000
HinP1I GCGC 2 cut(s) 798, 1000
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HinfI GANTC 7 cut(s) 221, 455, 483, 536, 578, 599, 921
HpaII CCGG 4 cut(s) 78, 230, 315, 885
HphI GGTGA 7 cut(s) 169, 199, 286, 664, 952, 1054, 1063
Hpy166II GTNNAC 5 cut(s) 487, 718, 778, 912, 930
Hpy188III TCNNGA 5 cut(s) 78, 258, 567, 740, 885
Hpy8I GTNNAC 5 cut(s) 487, 718, 778, 912, 930
Hpy99I CGWCG 3 cut(s) 290, 409, 620
HpyAV CCTTC 7 cut(s) 28, 200, 214, 526, 706, 864, 1042
HpyCH4III ACNGT 5 cut(s) 184, 722, 916, 979, 1023
HpyCH4V TGCA 6 cut(s) 122, 693, 805, 892, 997, 1090
HpyF10VI GCNNNNNNNGC 4 cut(s) 40, 513, 643, 795
HpyF3I CTNAG 1 cut(s) 51
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 4 cut(s) 697, 826, 832, 1094
HspAI GCGC 2 cut(s) 798, 1000
Kpn2I TCCGGA 2 cut(s) 77, 884
Kzo9I GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
LguI GCTCTTC 1 cut(s) 434
LmnI GCTCC 3 cut(s) 299, 375, 887
Lsp1109I GCAGC 7 cut(s) 71, 349, 472, 480, 553, 904, 1009
LweI GCATC 2 cut(s) 349, 633
MaeI CTAG 1 cut(s) 14
MaeIII GTNAC 3 cut(s) 670, 973, 1079
MalI GATC 7 cut(s) 262, 278, 512, 629, 744, 852, 1055
MboI GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
MflI RGATCY 1 cut(s) 850
MhlI GDGCHC 1 cut(s) 884
MluCI AATT 4 cut(s) 126, 150, 305, 476
MlyI GAGTC 5 cut(s) 464, 492, 545, 587, 608
MmeI TCCRAC 4 cut(s) 249, 363, 898, 1041
Mph1103I ATGCAT 1 cut(s) 807
MroI TCCGGA 2 cut(s) 77, 884
MslI CAYNNNNRTG 3 cut(s) 827, 965, 1007
MspI CCGG 4 cut(s) 78, 230, 315, 885
MspR9I CCNGG 6 cut(s) 230, 398, 452, 554, 682, 878
Mva1269I GAATGC 2 cut(s) 894, 953
MvaI CCWGG 5 cut(s) 398, 452, 554, 682, 878
MvnI CGCG 2 cut(s) 331, 966
MwoI GCNNNNNNNGC 4 cut(s) 40, 513, 643, 795
NciI CCSGG 1 cut(s) 230
NdeII GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
NlaIII CATG 4 cut(s) 697, 826, 832, 1094
NlaIV GGNNCC 7 cut(s) 234, 344, 402, 517, 624, 852, 883
NmeAIII GCCGAG 1 cut(s) 601
NmuCI GTSAC 1 cut(s) 670
NsiI ATGCAT 1 cut(s) 807
NspI RCATGY 3 cut(s) 697, 826, 1094
OliI CACNNNNGTG 1 cut(s) 965
PaeI GCATGC 2 cut(s) 697, 1094
PciSI GCTCTTC 1 cut(s) 434
PctI GAATGC 2 cut(s) 894, 953
PfeI GAWTC 2 cut(s) 221, 921
PflMI CCANNNNNTGG 1 cut(s) 681
PfoI TCCNGGA 1 cut(s) 450
PkrI GCNGC 9 cut(s) 86, 202, 364, 462, 495, 498, 543, 894, 999
PleI GAGTC 5 cut(s) 463, 491, 544, 586, 607
PpsI GAGTC 5 cut(s) 463, 491, 544, 586, 607
PpuMI RGGWCCY 2 cut(s) 343, 400
Psp5II RGGWCCY 2 cut(s) 343, 400
Psp6I CCWGG 5 cut(s) 396, 450, 552, 680, 876
PspGI CCWGG 5 cut(s) 396, 450, 552, 680, 876
PspN4I GGNNCC 7 cut(s) 234, 344, 402, 517, 624, 852, 883
PspPI GGNCC 6 cut(s) 232, 343, 400, 515, 550, 623
PspPPI RGGWCCY 2 cut(s) 343, 400
PsuI RGATCY 1 cut(s) 850
RsaI GTAC 1 cut(s) 929
RsaNI GTAC 1 cut(s) 928
RseI CAYNNNNRTG 3 cut(s) 827, 965, 1007
SapI GCTCTTC 1 cut(s) 434
SatI GCNGC 9 cut(s) 85, 201, 363, 461, 494, 497, 542, 893, 998
Sau3AI GATC 7 cut(s) 260, 276, 510, 627, 742, 850, 1053
Sau96I GGNCC 6 cut(s) 232, 343, 400, 515, 550, 623
SchI GAGTC 5 cut(s) 464, 492, 545, 587, 608
ScrFI CCNGG 6 cut(s) 230, 398, 452, 554, 682, 878
SduI GDGCHC 1 cut(s) 884
SfaNI GCATC 2 cut(s) 349, 633
SinI GGWCC 5 cut(s) 232, 343, 400, 550, 623
SmiMI CAYNNNNRTG 3 cut(s) 827, 965, 1007
SphI GCATGC 2 cut(s) 697, 1094
Sse9I AATT 4 cut(s) 126, 150, 305, 476
SsiI CCGC 7 cut(s) 201, 280, 329, 497, 505, 964, 1040
SspMI CTAG 1 cut(s) 14
StyD4I CCNGG 6 cut(s) 228, 396, 450, 552, 680, 876
TaaI ACNGT 5 cut(s) 184, 722, 916, 979, 1023
TaqI TCGA 3 cut(s) 285, 444, 597
TasI AATT 4 cut(s) 126, 150, 305, 476
TatI WGTACW 1 cut(s) 927
TauI GCSGC 2 cut(s) 203, 499
TfiI GAWTC 2 cut(s) 221, 921
TscAI CASTG 4 cut(s) 727, 919, 991, 1026
TseFI GTSAC 1 cut(s) 670
TseI GCWGC 7 cut(s) 84, 362, 460, 493, 541, 892, 997
Tsp45I GTSAC 1 cut(s) 670
TspDTI ATGAA 2 cut(s) 583, 691
TspRI CASTG 4 cut(s) 727, 919, 991, 1026
Van91I CCANNNNNTGG 1 cut(s) 681
VpaK11BI GGWCC 5 cut(s) 232, 343, 400, 550, 623
XceI RCATGY 3 cut(s) 697, 826, 1094
XcmI CCANNNNNNNNNTGG 1 cut(s) 616
XspI CTAG 1 cut(s) 14
Zsp2I ATGCAT 1 cut(s) 807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.