pycom05g31100

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
30963354 .. 30964394
1041 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g31100.1

Sequence Viewer

Length: 1041 bp
ATGGGTTCAATTCCGAAACTTTCCCTCCTCCTCCTCACCACCGCCGTCCTCTTCCTCGCCGCCTTCACCGAGTTATCCGAATCCAACCCGGACCCAGTCCCCGAACTCCTCTCCCTCCAATCCCGATCCAAATCTGGAGTGATCCACCTCGACGACCGCTCCCTCGCCAAATTCCTCACCGCTGTTAAACCCCCGCGACCCTACTGGGTCCTCATCTTCTTCGATGCCGCGAAGCTTCACGACAAGTCCGAGCTCCACCTCAAGGAGCTCCGCAAAGAGTTCGCGGTCGTCGCCACCTCCTTCATTGAGAACAACCAGGACCCGTCGTCCCCCTCCCACGCCAAGCTTTTCTTCTGCGACATCGAGTTCCAGGACTCGCAGCACAGCTTCTCCCAATTCGGAGTCAACTCGCTGCCGCACATCCGCCTGATCGGCCCCACCCACGGCCTTAAGGAGTCTCAGCAGATGGACCAGGGCGATTTCTCCCGATTGGCCGAGTCAATGTCCGAGTTCATCGAGTCCAAGACGAAACTCATCGTGGGTCCAATCCATCGGCCTCCGATGCTGTCTAAGAACCAGATTATGTTCGCCACCATTGCCTGGCTGGTTTGGACGCCATTCATTGCGAAGAAGATTTACAGTGGCAAGACATTGCTTCACGATCCGAGGATTTGGCTATCGGGGTCGGTTTTCATTTACTTCTTCAGCGTCTCGGGCGCAATGCATAACATTATTAGGAACATGCCCATGTTTTTGGTTGATAGGAATGATCCTTCCAAGCTCATATTTTTCTACCAGGGCTCCGGAATGCAGCTAGGAACAGAGGGATTCACCGTCGGATTCTTGTACACCATTGTCGGGTTGTTGCTGGCATTCCTCACCCGCGTGCTTGTTACGGTTCGAAATGTCAAAGCGCAGCGCATTGTGATGATTATTGCGCTGTGTGTTTCGTTCTGGGCGGTGCAGAAGGTGATCGATCAGTTGGATAACTGGAAGACGGGTTACGGGGTGCATGCTTTTTGGCCTACTAGCTGGAACTGA

Protein Analysis

347

Amino Acids

39.16

Weight (kDa)

9.1

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OST3_OST6 PF04756 35 - 335 4.1e-74 OST3 / OST6 family, transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013991)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 600
AccBSI CCGCTC 1 cut(s) 159
AccII CGCG 4 cut(s) 196, 230, 284, 885
AccIII TCCGGA 1 cut(s) 803
AclWI GGATC 4 cut(s) 120, 136, 656, 764
AcoI YGGCCR 1 cut(s) 492
AcsI RAATTY 1 cut(s) 170
AcuI CTGAAG 1 cut(s) 688
AcyI GRCGYC 1 cut(s) 614
AfaI GTAC 1 cut(s) 848
AfiI CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
AflII CTTAAG 1 cut(s) 449
AgsI TTSAA 1 cut(s) 9
AhdI GACNNNNNGTC 1 cut(s) 325
AjnI CCWGG 5 cut(s) 315, 369, 471, 599, 795
AjuI GAANNNNNNNTTGG 2 cut(s) 335, 367
AleI CACNNNNGTG 1 cut(s) 884
AluBI AGCT 8 cut(s) 235, 253, 268, 346, 387, 781, 814, 1032
AluI AGCT 8 cut(s) 235, 253, 268, 346, 387, 781, 814, 1032
Alw21I GWGCWC 2 cut(s) 255, 270
Alw26I GTCTC 2 cut(s) 462, 715
AlwI GGATC 4 cut(s) 120, 136, 656, 764
Ama87I CYCGRG 1 cut(s) 712
Aor13HI TCCGGA 1 cut(s) 803
AoxI GGCC 5 cut(s) 433, 445, 492, 554, 1022
ApeKI GCWGC 4 cut(s) 379, 412, 811, 916
ApoI RAATTY 1 cut(s) 170
AspLEI GCGC 4 cut(s) 719, 916, 921, 940
AspS9I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
AsuC2I CCSGG 1 cut(s) 89
AsuHPI GGTGA 6 cut(s) 28, 58, 169, 823, 871, 982
AsuII TTCGAA 1 cut(s) 901
AvaI CYCGRG 1 cut(s) 712
AvaII GGWCC 5 cut(s) 91, 208, 319, 469, 542
BanII GRGCYC 3 cut(s) 255, 270, 803
BarI GAAGNNNNNNTAC 4 cut(s) 620, 652, 986, 1018
BbsI GAAGAC 1 cut(s) 1001
Bbv12I GWGCWC 2 cut(s) 255, 270
BbvI GCAGC 4 cut(s) 391, 399, 823, 928
BccI CCATC 2 cut(s) 460, 558
BceAI ACGGC 2 cut(s) 29, 460
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BciT130I CCWGG 5 cut(s) 317, 371, 473, 601, 797
BcnI CCSGG 1 cut(s) 89
BcoDI GTCTC 2 cut(s) 462, 715
BfaI CTAG 2 cut(s) 815, 1029
BfrI CTTAAG 1 cut(s) 449
BglI GCCNNNNNGGC 1 cut(s) 432
BisI GCNGC 7 cut(s) 60, 228, 380, 413, 416, 812, 917
BlsI GCNGC 7 cut(s) 61, 229, 381, 414, 417, 813, 918
Bme1390I CCNGG 6 cut(s) 89, 317, 371, 473, 601, 797
Bme18I GGWCC 5 cut(s) 91, 208, 319, 469, 542
BmeRI GACNNNNNGTC 1 cut(s) 325
BmeT110I CYCGRG 1 cut(s) 712
BmgT120I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
BmiI GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
BmrFI CCNGG 6 cut(s) 89, 317, 371, 473, 601, 797
BmrI ACTGGG 2 cut(s) 89, 214
BmsI GCATC 2 cut(s) 214, 552
BmuI ACTGGG 2 cut(s) 89, 214
BpiI GAAGAC 1 cut(s) 1001
BpmI CTGGAG 1 cut(s) 156
Bpu14I TTCGAA 1 cut(s) 901
BpuEI CTTGAG 1 cut(s) 245
BpuMI CCSGG 1 cut(s) 89
Bsa29I ATCGAT 1 cut(s) 975
BsaBI GATNNNNATC 1 cut(s) 130
BsaHI GRCGYC 1 cut(s) 614
BsaJI CCNNGG 4 cut(s) 442, 472, 665, 796
BsaWI WCCGGW 1 cut(s) 803
BsaXI ACNNNNNCTCC 8 cut(s) 9, 39, 143, 173, 374, 404, 785, 815
Bsc4I CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
Bse1I ACTGG 3 cut(s) 95, 209, 995
Bse3DI GCAATG 4 cut(s) 594, 621, 650, 726
Bse8I GATNNNNATC 1 cut(s) 130
BseAI TCCGGA 1 cut(s) 803
BseBI CCWGG 5 cut(s) 317, 371, 473, 601, 797
BseCI ATCGAT 1 cut(s) 975
BseDI CCNNGG 4 cut(s) 442, 472, 665, 796
BseGI GGATG 1 cut(s) 420
BseJI GATNNNNATC 1 cut(s) 130
BseLI CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
BseMI GCAATG 4 cut(s) 594, 621, 650, 726
BseMII CTCAG 1 cut(s) 473
BseNI ACTGG 3 cut(s) 95, 209, 995
BseRI GAGGAG 4 cut(s) 17, 20, 23, 98
BseXI GCAGC 4 cut(s) 391, 399, 823, 928
BsgI GTGCAG 1 cut(s) 983
Bsh1236I CGCG 4 cut(s) 196, 230, 284, 885
Bsh1285I CGRYCG 2 cut(s) 157, 288
BshFI GGCC 5 cut(s) 435, 447, 494, 556, 1024
BshVI ATCGAT 1 cut(s) 975
BsiEI CGRYCG 2 cut(s) 157, 288
BsiHKAI GWGCWC 2 cut(s) 255, 270
BsiHKCI CYCGRG 1 cut(s) 712
BsiSI CCGG 2 cut(s) 89, 804
BslFI GGGAC 2 cut(s) 83, 313
BslI CCNNNNNNNGG 4 cut(s) 262, 443, 600, 858
BsmAI GTCTC 2 cut(s) 462, 715
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 2 cut(s) 83, 313
BsmI GAATGC 2 cut(s) 813, 872
BsnI GGCC 5 cut(s) 435, 447, 494, 556, 1024
BsoBI CYCGRG 1 cut(s) 712
Bsp119I TTCGAA 1 cut(s) 901
Bsp1286I GDGCHC 3 cut(s) 255, 270, 803
Bsp13I TCCGGA 1 cut(s) 803
Bsp1407I TGTACA 1 cut(s) 846
Bsp143I GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
BspANI GGCC 5 cut(s) 435, 447, 494, 556, 1024
BspCNI CTCAG 1 cut(s) 472
BspDI ATCGAT 1 cut(s) 975
BspEI TCCGGA 1 cut(s) 803
BspFNI CGCG 4 cut(s) 196, 230, 284, 885
BspLI GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
BspPI GGATC 4 cut(s) 120, 136, 656, 764
BspT104I TTCGAA 1 cut(s) 901
BspTI CTTAAG 1 cut(s) 449
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 4 cut(s) 594, 621, 650, 726
BsrGI TGTACA 1 cut(s) 846
BsrI ACTGG 3 cut(s) 95, 209, 995
BssECI CCNNGG 4 cut(s) 442, 472, 665, 796
BssMI GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
BssNI GRCGYC 1 cut(s) 614
Bst2UI CCWGG 5 cut(s) 317, 371, 473, 601, 797
Bst4CI ACNGT 3 cut(s) 641, 835, 898
Bst6I CTCTTC 1 cut(s) 56
BstACI GRCGYC 1 cut(s) 614
BstAFI CTTAAG 1 cut(s) 449
BstAUI TGTACA 1 cut(s) 846
BstBI TTCGAA 1 cut(s) 901
BstC8I GCNNGC 3 cut(s) 870, 887, 1014
BstDEI CTNAG 2 cut(s) 459, 570
BstDSI CCRYGG 1 cut(s) 442
BstF5I GGATG 1 cut(s) 420
BstFNI CGCG 4 cut(s) 196, 230, 284, 885
BstHHI GCGC 4 cut(s) 719, 916, 921, 940
BstKTI GATC 7 cut(s) 128, 144, 432, 664, 772, 975, 979
BstMAI GTCTC 2 cut(s) 462, 715
BstMBI GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
BstMCI CGRYCG 2 cut(s) 157, 288
BstMWI GCNNNNNNNGC 5 cut(s) 290, 432, 562, 596, 714
BstNI CCWGG 5 cut(s) 317, 371, 473, 601, 797
BstNSI RCATGY 2 cut(s) 745, 1016
BstSCI CCNGG 6 cut(s) 87, 315, 369, 471, 599, 795
BstUI CGCG 4 cut(s) 196, 230, 284, 885
BstV1I GCAGC 4 cut(s) 391, 399, 823, 928
BstV2I GAAGAC 1 cut(s) 1001
BstXI CCANNNNNNTGG 1 cut(s) 754
Bsu15I ATCGAT 1 cut(s) 975
BsuRI GGCC 5 cut(s) 435, 447, 494, 556, 1024
BsuTUI ATCGAT 1 cut(s) 975
BtgI CCRYGG 1 cut(s) 442
BtsCI GGATG 1 cut(s) 420
BtsIMutI CAGTG 1 cut(s) 646
Cac8I GCNNGC 3 cut(s) 870, 887, 1014
CfoI GCGC 4 cut(s) 719, 916, 921, 940
Cfr13I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
ClaI ATCGAT 1 cut(s) 975
CseI GACGC 2 cut(s) 622, 697
Csp6I GTAC 1 cut(s) 847
CviAII CATG 3 cut(s) 742, 748, 1013
CviQI GTAC 1 cut(s) 847
DdeI CTNAG 2 cut(s) 459, 570
DpnI GATC 7 cut(s) 127, 143, 431, 663, 771, 974, 978
DpnII GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
DriI GACNNNNNGTC 1 cut(s) 325
EaeI YGGCCR 1 cut(s) 492
Eam1104I CTCTTC 1 cut(s) 56
Eam1105I GACNNNNNGTC 1 cut(s) 325
EarI CTCTTC 1 cut(s) 56
EciI GGCGGA 1 cut(s) 413
Ecl136II GAGCTC 2 cut(s) 253, 268
Eco24I GRGCYC 3 cut(s) 255, 270, 803
Eco47I GGWCC 5 cut(s) 91, 208, 319, 469, 542
Eco53kI GAGCTC 2 cut(s) 253, 268
Eco57I CTGAAG 1 cut(s) 688
Eco88I CYCGRG 1 cut(s) 712
EcoICRI GAGCTC 2 cut(s) 253, 268
EcoO109I RGGNCCY 2 cut(s) 208, 319
EcoRII CCWGG 5 cut(s) 315, 369, 471, 599, 795
EcoT22I ATGCAT 1 cut(s) 726
EcoT38I GRGCYC 3 cut(s) 255, 270, 803
Esp3I CGTCTC 1 cut(s) 715
FaeI CATG 3 cut(s) 745, 751, 1016
FaiI YATR 6 cut(s) 584, 726, 743, 749, 785, 1014
FalI AAGNNNNNCTT 2 cut(s) 335, 367
FaqI GGGAC 2 cut(s) 83, 313
FatI CATG 3 cut(s) 741, 747, 1012
FauI CCCGC 2 cut(s) 201, 890
Fnu4HI GCNGC 7 cut(s) 60, 228, 380, 413, 416, 812, 917
FokI GGATG 1 cut(s) 407
FriOI GRGCYC 3 cut(s) 255, 270, 803
Fsp4HI GCNGC 7 cut(s) 60, 228, 380, 413, 416, 812, 917
FspBI CTAG 2 cut(s) 815, 1029
GlaI GCGC 4 cut(s) 718, 915, 920, 939
GluI GCNGC 7 cut(s) 60, 228, 380, 413, 416, 812, 917
GsuI CTGGAG 1 cut(s) 156
HaeIII GGCC 5 cut(s) 435, 447, 494, 556, 1024
HapII CCGG 2 cut(s) 89, 804
HgaI GACGC 2 cut(s) 622, 697
HhaI GCGC 4 cut(s) 719, 916, 921, 940
Hin1I GRCGYC 1 cut(s) 614
Hin1II CATG 3 cut(s) 745, 751, 1016
Hin6I GCGC 4 cut(s) 717, 914, 919, 938
HinP1I GCGC 4 cut(s) 717, 914, 919, 938
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 2 cut(s) 233, 344
HinfI GANTC 8 cut(s) 80, 374, 402, 455, 497, 518, 828, 840
HpaII CCGG 2 cut(s) 89, 804
HphI GGTGA 6 cut(s) 28, 58, 169, 823, 871, 982
Hpy166II GTNNAC 2 cut(s) 406, 849
Hpy188I TCNGA 8 cut(s) 15, 79, 250, 401, 508, 561, 666, 839
Hpy188III TCNNGA 6 cut(s) 123, 135, 239, 486, 659, 804
Hpy8I GTNNAC 2 cut(s) 406, 849
Hpy99I CGWCG 4 cut(s) 155, 293, 328, 839
HpyAV CCTTC 4 cut(s) 73, 310, 783, 961
HpyCH4III ACNGT 3 cut(s) 641, 835, 898
HpyCH4V TGCA 4 cut(s) 724, 811, 964, 1012
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 432, 562, 596, 714
HpyF3I CTNAG 2 cut(s) 459, 570
Hsp92I GRCGYC 1 cut(s) 614
Hsp92II CATG 3 cut(s) 745, 751, 1016
HspAI GCGC 4 cut(s) 717, 914, 919, 938
Kpn2I TCCGGA 1 cut(s) 803
Kzo9I GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
LmnI GCTCC 5 cut(s) 164, 258, 265, 273, 806
Lsp1109I GCAGC 4 cut(s) 391, 399, 823, 928
LweI GCATC 2 cut(s) 214, 552
MaeI CTAG 2 cut(s) 815, 1029
MaeIII GTNAC 2 cut(s) 892, 1001
MalI GATC 7 cut(s) 127, 143, 431, 663, 771, 974, 978
MbiI CCGCTC 1 cut(s) 159
MboI GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
MboII GAAGA 8 cut(s) 43, 208, 211, 343, 640, 643, 694, 1006
MhlI GDGCHC 3 cut(s) 255, 270, 803
MluCI AATT 3 cut(s) 9, 170, 395
MlyI GAGTC 5 cut(s) 368, 411, 464, 506, 527
MmeI TCCRAC 3 cut(s) 108, 817, 963
Mph1103I ATGCAT 1 cut(s) 726
MroI TCCGGA 1 cut(s) 803
MseI TTAA 2 cut(s) 186, 450
MslI CAYNNNNRTG 3 cut(s) 746, 884, 926
MspA1I CMGCKG 1 cut(s) 182
MspCI CTTAAG 1 cut(s) 449
MspI CCGG 2 cut(s) 89, 804
MspR9I CCNGG 6 cut(s) 89, 317, 371, 473, 601, 797
MteI GCGCNGCGC 1 cut(s) 917
Mva1269I GAATGC 2 cut(s) 813, 872
MvaI CCWGG 5 cut(s) 317, 371, 473, 601, 797
MvnI CGCG 4 cut(s) 196, 230, 284, 885
MwoI GCNNNNNNNGC 5 cut(s) 290, 432, 562, 596, 714
NciI CCSGG 1 cut(s) 89
NdeII GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
NlaIII CATG 3 cut(s) 745, 751, 1016
NlaIV GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
NmeAIII GCCGAG 1 cut(s) 520
NsiI ATGCAT 1 cut(s) 726
NspI RCATGY 2 cut(s) 745, 1016
NspV TTCGAA 1 cut(s) 901
OliI CACNNNNGTG 1 cut(s) 884
PaeI GCATGC 1 cut(s) 1016
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 2 cut(s) 813, 872
PfeI GAWTC 3 cut(s) 80, 828, 840
PflFI GACNNNGTC 1 cut(s) 95
PflMI CCANNNNNTGG 1 cut(s) 600
PfoI TCCNGGA 1 cut(s) 369
PkrI GCNGC 7 cut(s) 61, 229, 381, 414, 417, 813, 918
PleI GAGTC 5 cut(s) 368, 410, 463, 505, 526
PpsI GAGTC 5 cut(s) 368, 410, 463, 505, 526
PpuMI RGGWCCY 2 cut(s) 208, 319
Psp124BI GAGCTC 2 cut(s) 255, 270
Psp5II RGGWCCY 2 cut(s) 208, 319
Psp6I CCWGG 5 cut(s) 315, 369, 471, 599, 795
PspGI CCWGG 5 cut(s) 315, 369, 471, 599, 795
PspN4I GGNNCC 6 cut(s) 93, 209, 321, 436, 543, 802
PspPI GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
PspPPI RGGWCCY 2 cut(s) 208, 319
PsyI GACNNNGTC 1 cut(s) 95
RsaI GTAC 1 cut(s) 848
RsaNI GTAC 1 cut(s) 847
RseI CAYNNNNRTG 3 cut(s) 746, 884, 926
SacI GAGCTC 2 cut(s) 255, 270
SaqAI TTAA 2 cut(s) 186, 450
SatI GCNGC 7 cut(s) 60, 228, 380, 413, 416, 812, 917
Sau3AI GATC 7 cut(s) 125, 141, 429, 661, 769, 972, 976
Sau96I GGNCC 6 cut(s) 91, 208, 319, 434, 469, 542
SchI GAGTC 5 cut(s) 368, 411, 464, 506, 527
ScrFI CCNGG 6 cut(s) 89, 317, 371, 473, 601, 797
SduI GDGCHC 3 cut(s) 255, 270, 803
SfaNI GCATC 2 cut(s) 214, 552
SfuI TTCGAA 1 cut(s) 901
SinI GGWCC 5 cut(s) 91, 208, 319, 469, 542
SmiMI CAYNNNNRTG 3 cut(s) 746, 884, 926
SmlI CTYRAG 2 cut(s) 260, 449
SmoI CTYRAG 2 cut(s) 260, 449
SphI GCATGC 1 cut(s) 1016
Sse9I AATT 3 cut(s) 9, 170, 395
SspMI CTAG 2 cut(s) 815, 1029
SstI GAGCTC 2 cut(s) 255, 270
StyD4I CCNGG 6 cut(s) 87, 315, 369, 471, 599, 795
TaaI ACNGT 3 cut(s) 641, 835, 898
TaqI TCGA 6 cut(s) 150, 222, 363, 516, 901, 975
TasI AATT 3 cut(s) 9, 170, 395
TatI WGTACW 1 cut(s) 846
TauI GCSGC 3 cut(s) 62, 230, 418
TfiI GAWTC 3 cut(s) 80, 828, 840
Tru1I TTAA 2 cut(s) 186, 450
Tru9I TTAA 2 cut(s) 186, 450
TscAI CASTG 1 cut(s) 646
TseI GCWGC 4 cut(s) 379, 412, 811, 916
TspDTI ATGAA 4 cut(s) 292, 502, 610, 682
TspRI CASTG 1 cut(s) 646
Tth111I GACNNNGTC 1 cut(s) 95
Van91I CCANNNNNTGG 1 cut(s) 600
Vha464I CTTAAG 1 cut(s) 449
VpaK11BI GGWCC 5 cut(s) 91, 208, 319, 469, 542
XapI RAATTY 1 cut(s) 170
XceI RCATGY 2 cut(s) 745, 1016
XcmI CCANNNNNNNNNTGG 1 cut(s) 601
XspI CTAG 2 cut(s) 815, 1029
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.