Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0013158

Physical Location & Seq

Genomic Coordinates Forward (+)

9238468 .. 9242711

Gene Structure 4244 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1024400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGCCGCCTTTTCCCTCCAGACATCGACCTCCAGCATTGCCCTTCCCAGTTTCGAAACCCGAATCCCCGGATCCGATTTGGGTTCAAACCCAAAATCCATATGTTTCCCTTGTCAGCCTCGTTTGCTTCCTCTCACGCGTCGGAGCAACAGTAAGAGTAGATCAAGAGGAGGAGTTGTGATGGCGGTGGCAGTGACTGGCAATGACCAGTCCCAAGTGGAAGTCGACGTCTCTCTGAGCCCACGAGTCAACTCCGTCAAGCCTTCGAAGACAGTCGCCATTACCGACCAGGCCACGGCTCTCGTGCAAGCCGGAGTGCCCGTCATTCGATTAGCTGCTGGCGAACCTGATTTCGATACCCCTTCCATCGTAGCTGAGGCGGGTATCAATGCGATTCGCGAAGGCTTCACCAGGTACACACCAAATGCAGGGACTTTGGAGCTGCGCCAAGCAATTTGTCATAAGCTCAAAGAGGAGAATGGGATCACTTACACACCGGATCAGATCGTAGTTAGCAATGGAGCCAAGCAGAGCATTGTTCAAGCTGTGCTTGCAGTTTGTTCCCCAGGGGATGAGGTTATGATTCCAGCTCCATTTTGGGTGAGTTACCCTGAAATGGCAAGGATGGCCGATGCAACTCCTGTGATTCTTCCAACGAGCATCTCCAATGATTTTCTCGTAGATCCTAAACTTCTCGAATCCAAACTCACTGAGAAGTCAAGACTGCTGATTCTTTGTTCTCCATCCAACCCCACAGGGTCTGTCTACCCCAAGAATTTGCTTCAAGAGATTGCTAAGATTGTAGCAAAGCATCCTAGGCTTCTGGTTATTTCTGATGAAATATATGAACACATAATTTATGCTCCGGCAACGCATACAAGCTTTGCATCCTTGCCAGGCATGTGGGAGAGGACTCTGACAATCAATGGGTTTTCTAAGGCTTTTGCAATGACTGGTTGGCGACTTGGATATATTGCCGGGCCTAAACACTTTGTTGCGGCTTGTGGAAAGCTCCAGAGTCAGTTCACCTCAGGTGCCTGTAGTATATCACAGAAAGCAGGAGTGGCTGCATTAGGTCTTGGTTTTGCTGGTGGGGAGGCAGTTTCTGTTATGGTGAAAGCATTCCGGGAGCGACGGGATTTCTTGGTCAAAAGCTTTGGCGAACTTTCAGGTGTCAAGATCTCAGAACCCAGGGGAGCTTTCTATCTCTTCGTAGATTTCAGCGCTTACTATGGAACAGAGGCTGAAGGATTTGGTAAAATTGAGAATTCAGAGTCACTATGCCGTTACCTACTTGACAAGGGTCAGGTTGCACTAGTACCGGGAGATGCATTTGGAGATGACACGTGCATACGAATCTCCTACGCAGCATCCCTTCCCACCGTACAGGCAGCTGTGGAGAGAATTAAGAAAGCTCTTGTTGAATTAAAGCCTGTGGCCGGTGTTACTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004069 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008483 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009095 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016740 GO:0016769 GO:0019438 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0033853 GO:0033854 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00350 ko00360 ko00400 ko00950 ko00960 ko01100 ko01110 ko01130 ko01230 map00350 map00360 map00400 map00950 map00960 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

485

Amino Acids

51.79

Weight (kDa)

8.46

Isoelectric Point (pI)

35.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_1_2	PF00155	107 - 469	5.9e-74	Aminotransferase class I and II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22250 AT2G22250 AT2G22250
fragaria_vesca	FvH4_1g21500
malus_domestica	MD01G1024400.v1.1 MD15G1329000.v1.1
prunus_persica	Prupe.6G179700_v2.0.a1
pyrus_communis	pycom01g05210 pycom01g05220 pycom15g29680 pycom15g29690 pycom15g29700
rosa_chinensis	RchiOBHm_Chr2g0115381
rosa_laevigata	RLG00000018181
rosa_multiflora	Rmu_sc0001897.1_g000009
rosa_roxburghii	Rroxscaffold_2G00130870
rosa_rugosa	Rorug02G0196000
rosa_wichuraiana	Rw2G019870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	231
AccB1I	GGYRCC	1 cut(s)	1034
AccI	GTMKAC	2 cut(s)	225, 765
AccII	CGCG	2 cut(s)	139, 399
AciI	CCGC	4 cut(s)	6, 185, 380, 998
AclWI	GGATC	5 cut(s)	66, 79, 491, 507, 677
AcoI	YGGCCR	3 cut(s)	3, 627, 1437
AcsI	RAATTY	2 cut(s)	775, 1267
AcuI	CTGAAG	1 cut(s)	1266
AcvI	CACGTG	1 cut(s)	1347
AcyI	GRCGYC	1 cut(s)	228
AfaI	GTAC	3 cut(s)	416, 1320, 1386
AfeI	AGCGCT	1 cut(s)	1225
AfiI	CCNNNNNNNGG	4 cut(s)	295, 428, 616, 1439
AflIII	ACRYGT	2 cut(s)	137, 1344
AgsI	TTSAA	4 cut(s)	87, 542, 785, 1424
AhlI	ACTAGT	1 cut(s)	1315
AjnI	CCWGG	5 cut(s)	288, 410, 565, 895, 1190
Alw26I	GTCTC	1 cut(s)	235
AlwI	GGATC	5 cut(s)	66, 79, 491, 507, 677
AlwNI	CAGNNNCTG	4 cut(s)	197, 761, 1106, 1244
Aor51HI	AGCGCT	1 cut(s)	1225
AoxI	GGCC	5 cut(s)	3, 291, 627, 980, 1437
ApeKI	GCWGC	5 cut(s)	335, 442, 1067, 1367, 1391
ApoI	RAATTY	2 cut(s)	775, 1267
Asp700I	GAANNNNTTC	1 cut(s)	1121
AspA2I	CCTAGG	1 cut(s)	815
AspLEI	GCGC	2 cut(s)	447, 1226
AspS9I	GGNCC	1 cut(s)	980
AsuC2I	CCSGG	4 cut(s)	69, 979, 1127, 1323
AsuHPI	GGTGA	4 cut(s)	400, 613, 1018, 1126
AsuII	TTCGAA	2 cut(s)	54, 266
AvrII	CCTAGG	1 cut(s)	815
AxyI	CCTNAGG	1 cut(s)	1030
BaeGI	GKGCMC	1 cut(s)	321
BamHI	GGATCC	1 cut(s)	71
BanI	GGYRCC	1 cut(s)	1034
BanII	GRGCYC	1 cut(s)	242
BauI	CACGAG	2 cut(s)	243, 302
BbrPI	CACGTG	1 cut(s)	1347
BbsI	GAAGAC	1 cut(s)	275
BbvCI	CCTCAGC	1 cut(s)	375
BbvI	GCAGC	5 cut(s)	322, 429, 1054, 1379, 1403
BccI	CCATC	4 cut(s)	175, 374, 619, 751
BceAI	ACGGC	2 cut(s)	312, 1269
BciT130I	CCWGG	5 cut(s)	290, 412, 567, 897, 1192
BcnI	CCSGG	4 cut(s)	69, 979, 1127, 1323
BcoDI	GTCTC	1 cut(s)	235
BcuI	ACTAGT	1 cut(s)	1315
BfaI	CTAG	2 cut(s)	816, 1316
BfmI	CTRYAG	1 cut(s)	1039
BfoI	RGCGCY	1 cut(s)	1227
BglII	AGATCT	1 cut(s)	1179
BisI	GCNGC	7 cut(s)	6, 336, 443, 999, 1068, 1368, 1392
BlnI	CCTAGG	1 cut(s)	815
BlsI	GCNGC	7 cut(s)	7, 337, 444, 1000, 1069, 1369, 1393
Bme1390I	CCNGG	9 cut(s)	69, 290, 412, 567, 897, 979, 1127, 1192, 1323
BmgT120I	GGNCC	1 cut(s)	980
BmiI	GGNNCC	3 cut(s)	73, 523, 1036
BmrFI	CCNGG	9 cut(s)	69, 290, 412, 567, 897, 979, 1127, 1192, 1323
BmrI	ACTGGG	1 cut(s)	42
BmsI	GCATC	6 cut(s)	622, 669, 820, 896, 1318, 1379
BmuI	ACTGGG	1 cut(s)	42
BoxI	GACNNNNGTC	1 cut(s)	1302
BpiI	GAAGAC	1 cut(s)	275
BpmI	CTGGAG	2 cut(s)	16, 998
Bpu10I	CCTNAGC	1 cut(s)	375
Bpu14I	TTCGAA	2 cut(s)	54, 266
BpuMI	CCSGG	4 cut(s)	69, 979, 1127, 1323
BsaAI	YACGTR	1 cut(s)	1347
BsaHI	GRCGYC	1 cut(s)	228
BsaJI	CCNNGG	7 cut(s)	67, 294, 565, 566, 815, 1190, 1191
BsaWI	WCCGGW	1 cut(s)	496
BsaXI	ACNNNNNCTCC	6 cut(s)	136, 162, 166, 192, 306, 336
Bsc4I	CCNNNNNNNGG	4 cut(s)	295, 428, 616, 1439
Bse118I	RCCGGY	1 cut(s)	1439
Bse1I	ACTGG	4 cut(s)	48, 202, 208, 958
Bse21I	CCTNAGG	1 cut(s)	1030
Bse3DI	GCAATG	4 cut(s)	36, 208, 523, 954
BseBI	CCWGG	5 cut(s)	290, 412, 567, 897, 1192
BseDI	CCNNGG	7 cut(s)	67, 294, 565, 566, 815, 1190, 1191
BseGI	GGATG	6 cut(s)	577, 630, 743, 811, 887, 1370
BseLI	CCNNNNNNNGG	4 cut(s)	295, 428, 616, 1439
BseMI	GCAATG	4 cut(s)	36, 208, 523, 954
BseMII	CTCAG	5 cut(s)	227, 366, 702, 1044, 1197
BseNI	ACTGG	4 cut(s)	48, 202, 208, 958
BseRI	GAGGAG	3 cut(s)	183, 186, 488
BseSI	GKGCMC	1 cut(s)	321
BseXI	GCAGC	5 cut(s)	322, 429, 1054, 1379, 1403
Bsh1236I	CGCG	2 cut(s)	139, 399
BshFI	GGCC	5 cut(s)	5, 293, 629, 982, 1439
BshNI	GGYRCC	1 cut(s)	1034
BsiSI	CCGG	8 cut(s)	69, 312, 497, 866, 978, 1126, 1322, 1440
BslFI	GGGAC	2 cut(s)	196, 445
BslI	CCNNNNNNNGG	4 cut(s)	295, 428, 616, 1439
BsmAI	GTCTC	1 cut(s)	235
BsmBI	CGTCTC	1 cut(s)	235
BsmFI	GGGAC	2 cut(s)	196, 445
BsmI	GAATGC	1 cut(s)	1121
BsnI	GGCC	5 cut(s)	5, 293, 629, 982, 1439
Bsp119I	TTCGAA	2 cut(s)	54, 266
Bsp1286I	GDGCHC	2 cut(s)	242, 321
Bsp143I	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
Bsp68I	TCGCGA	1 cut(s)	399
BspACI	CCGC	4 cut(s)	6, 185, 380, 998
BspANI	GGCC	5 cut(s)	5, 293, 629, 982, 1439
BspCNI	CTCAG	5 cut(s)	228, 367, 703, 1043, 1196
BspFNI	CGCG	2 cut(s)	139, 399
BspLI	GGNNCC	3 cut(s)	73, 523, 1036
BspPI	GGATC	5 cut(s)	66, 79, 491, 507, 677
BspT104I	TTCGAA	2 cut(s)	54, 266
BspT107I	GGYRCC	1 cut(s)	1034
BsrDI	GCAATG	4 cut(s)	36, 208, 523, 954
BsrFI	RCCGGY	1 cut(s)	1439
BsrI	ACTGG	4 cut(s)	48, 202, 208, 958
BssAI	RCCGGY	1 cut(s)	1439
BssECI	CCNNGG	7 cut(s)	67, 294, 565, 566, 815, 1190, 1191
BssMI	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
BssNI	GRCGYC	1 cut(s)	228
BssSI	CACGAG	2 cut(s)	243, 302
BssT1I	CCWWGG	1 cut(s)	815
Bst2BI	CACGAG	2 cut(s)	243, 302
Bst2UI	CCWGG	5 cut(s)	290, 412, 567, 897, 1192
Bst4CI	ACNGT	3 cut(s)	152, 274, 1384
Bst6I	CTCTTC	1 cut(s)	1214
BstACI	GRCGYC	1 cut(s)	228
BstBAI	YACGTR	1 cut(s)	1347
BstBI	TTCGAA	2 cut(s)	54, 266
BstC8I	GCNNGC	3 cut(s)	309, 340, 552
BstDEI	CTNAG	7 cut(s)	236, 375, 711, 795, 936, 1030, 1183
BstDSI	CCRYGG	1 cut(s)	294
BstF5I	GGATG	6 cut(s)	577, 630, 743, 811, 887, 1370
BstFNI	CGCG	2 cut(s)	139, 399
BstH2I	RGCGCY	1 cut(s)	1227
BstHHI	GCGC	2 cut(s)	447, 1226
BstKTI	GATC	7 cut(s)	74, 164, 486, 502, 507, 685, 1182
BstMAI	GTCTC	1 cut(s)	235
BstMBI	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
BstMWI	GCNNNNNNNGC	5 cut(s)	124, 551, 626, 817, 1064
BstNI	CCWGG	5 cut(s)	290, 412, 567, 897, 1192
BstNSI	RCATGY	1 cut(s)	904
BstPAI	GACNNNNGTC	1 cut(s)	1302
BstSCI	CCNGG	9 cut(s)	67, 288, 410, 565, 895, 977, 1125, 1190, 1321
BstSFI	CTRYAG	1 cut(s)	1039
BstSLI	GKGCMC	1 cut(s)	321
BstUI	CGCG	2 cut(s)	139, 399
BstV1I	GCAGC	5 cut(s)	322, 429, 1054, 1379, 1403
BstV2I	GAAGAC	1 cut(s)	275
BstX2I	RGATCY	3 cut(s)	71, 682, 1179
BstXI	CCANNNNNNTGG	1 cut(s)	903
BstYI	RGATCY	3 cut(s)	71, 682, 1179
Bsu36I	CCTNAGG	1 cut(s)	1030
BsuRI	GGCC	5 cut(s)	5, 293, 629, 982, 1439
BtgI	CCRYGG	1 cut(s)	294
BtsCI	GGATG	6 cut(s)	577, 630, 743, 811, 887, 1370
BtsI	GCAGTG	1 cut(s)	198
BtsIMutI	CAGTG	2 cut(s)	198, 708
BtuMI	TCGCGA	1 cut(s)	399
Cac8I	GCNNGC	3 cut(s)	309, 340, 552
CaiI	CAGNNNCTG	4 cut(s)	197, 761, 1106, 1244
CfoI	GCGC	2 cut(s)	447, 1226
Cfr10I	RCCGGY	1 cut(s)	1439
Cfr13I	GGNCC	1 cut(s)	980
CseI	GACGC	1 cut(s)	128
CsiI	ACCWGGT	1 cut(s)	410
Csp6I	GTAC	3 cut(s)	415, 1319, 1385
CviAII	CATG	1 cut(s)	901
CviQI	GTAC	3 cut(s)	415, 1319, 1385
DdeI	CTNAG	7 cut(s)	236, 375, 711, 795, 936, 1030, 1183
DpnI	GATC	7 cut(s)	73, 163, 485, 501, 506, 684, 1181
DpnII	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
EaeI	YGGCCR	3 cut(s)	3, 627, 1437
Eam1104I	CTCTTC	1 cut(s)	1214
EarI	CTCTTC	1 cut(s)	1214
Eco130I	CCWWGG	1 cut(s)	815
Eco24I	GRGCYC	1 cut(s)	242
Eco47III	AGCGCT	1 cut(s)	1225
Eco57I	CTGAAG	1 cut(s)	1266
Eco72I	CACGTG	1 cut(s)	1347
Eco81I	CCTNAGG	1 cut(s)	1030
EcoRI	GAATTC	1 cut(s)	1267
EcoRII	CCWGG	5 cut(s)	288, 410, 565, 895, 1190
EcoT14I	CCWWGG	1 cut(s)	815
EcoT22I	ATGCAT	1 cut(s)	1333
EcoT38I	GRGCYC	1 cut(s)	242
ErhI	CCWWGG	1 cut(s)	815
Esp3I	CGTCTC	1 cut(s)	235
FaeI	CATG	1 cut(s)	904
FalI	AAGNNNNNCTT	2 cut(s)	534, 566
FaqI	GGGAC	2 cut(s)	196, 445
FatI	CATG	1 cut(s)	900
FauI	CCCGC	1 cut(s)	373
FauNDI	CATATG	1 cut(s)	101
FblI	GTMKAC	2 cut(s)	225, 765
Fnu4HI	GCNGC	7 cut(s)	6, 336, 443, 999, 1068, 1368, 1392
FokI	GGATG	6 cut(s)	584, 637, 730, 798, 874, 1357
FriOI	GRGCYC	1 cut(s)	242
Fsp4HI	GCNGC	7 cut(s)	6, 336, 443, 999, 1068, 1368, 1392
FspBI	CTAG	2 cut(s)	816, 1316
GlaI	GCGC	2 cut(s)	446, 1225
GluI	GCNGC	7 cut(s)	6, 336, 443, 999, 1068, 1368, 1392
GsuI	CTGGAG	2 cut(s)	16, 998
HaeII	RGCGCY	1 cut(s)	1227
HaeIII	GGCC	5 cut(s)	5, 293, 629, 982, 1439
HapII	CCGG	8 cut(s)	69, 312, 497, 866, 978, 1126, 1322, 1440
HgaI	GACGC	1 cut(s)	128
HhaI	GCGC	2 cut(s)	447, 1226
Hin1I	GRCGYC	1 cut(s)	228
Hin1II	CATG	1 cut(s)	904
Hin6I	GCGC	2 cut(s)	445, 1224
HinP1I	GCGC	2 cut(s)	445, 1224
HincII	GTYRAC	2 cut(s)	226, 250
HindII	GTYRAC	2 cut(s)	226, 250
HindIII	AAGCTT	2 cut(s)	880, 1153
HpaII	CCGG	8 cut(s)	69, 312, 497, 866, 978, 1126, 1322, 1440
HphI	GGTGA	4 cut(s)	400, 613, 1018, 1126
Hpy166II	GTNNAC	5 cut(s)	226, 250, 417, 766, 1026
Hpy188I	TCNGA	8 cut(s)	76, 144, 237, 504, 835, 918, 1186, 1273
Hpy188III	TCNNGA	8 cut(s)	19, 165, 398, 695, 720, 785, 1015, 1177
Hpy8I	GTNNAC	5 cut(s)	226, 250, 417, 766, 1026
Hpy99I	CGWCG	3 cut(s)	144, 230, 1137
HpyAV	CCTTC	6 cut(s)	53, 273, 372, 395, 1241, 1385
HpyCH4III	ACNGT	3 cut(s)	152, 274, 1384
HpyCH4IV	ACGT	2 cut(s)	228, 1346
HpyF10VI	GCNNNNNNNGC	5 cut(s)	124, 551, 626, 817, 1064
HpyF3I	CTNAG	7 cut(s)	236, 375, 711, 795, 936, 1030, 1183
HpySE526I	ACGT	2 cut(s)	228, 1346
Hsp92I	GRCGYC	1 cut(s)	228
Hsp92II	CATG	1 cut(s)	904
HspAI	GCGC	2 cut(s)	445, 1224
Kzo9I	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
LmnI	GCTCC	8 cut(s)	144, 439, 521, 595, 868, 1017, 1129, 1196
Lsp1109I	GCAGC	5 cut(s)	322, 429, 1054, 1379, 1403
LweI	GCATC	6 cut(s)	622, 669, 820, 896, 1318, 1379
MabI	ACCWGGT	1 cut(s)	410
MaeI	CTAG	2 cut(s)	816, 1316
MaeII	ACGT	2 cut(s)	228, 1346
MaeIII	GTNAC	5 cut(s)	193, 605, 1275, 1286, 1444
MalI	GATC	7 cut(s)	73, 163, 485, 501, 506, 684, 1181
MboI	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
MboII	GAAGA	3 cut(s)	280, 641, 1201
MflI	RGATCY	3 cut(s)	71, 682, 1179
MhlI	GDGCHC	2 cut(s)	242, 321
MluCI	AATT	7 cut(s)	453, 775, 855, 1260, 1267, 1404, 1424
MluI	ACGCGT	1 cut(s)	137
MlyI	GAGTC	4 cut(s)	255, 907, 1027, 1283
MmeI	TCCRAC	3 cut(s)	122, 677, 771
Mph1103I	ATGCAT	1 cut(s)	1333
MroXI	GAANNNNTTC	1 cut(s)	1121
MseI	TTAA	2 cut(s)	1407, 1427
MspA1I	CMGCKG	1 cut(s)	1394
MspI	CCGG	8 cut(s)	69, 312, 497, 866, 978, 1126, 1322, 1440
MspR9I	CCNGG	9 cut(s)	69, 290, 412, 567, 897, 979, 1127, 1192, 1323
Mva1269I	GAATGC	1 cut(s)	1121
MvaI	CCWGG	5 cut(s)	290, 412, 567, 897, 1192
MvnI	CGCG	2 cut(s)	139, 399
MwoI	GCNNNNNNNGC	5 cut(s)	124, 551, 626, 817, 1064
NciI	CCSGG	4 cut(s)	69, 979, 1127, 1323
NdeI	CATATG	1 cut(s)	101
NdeII	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
NlaIII	CATG	1 cut(s)	904
NlaIV	GGNNCC	3 cut(s)	73, 523, 1036
NmuCI	GTSAC	2 cut(s)	193, 1275
NruI	TCGCGA	1 cut(s)	399
NsiI	ATGCAT	1 cut(s)	1333
NspI	RCATGY	1 cut(s)	904
NspV	TTCGAA	2 cut(s)	54, 266
PasI	CCCWGGG	2 cut(s)	566, 1191
PcsI	WCGNNNNNNNCGW	1 cut(s)	282
PctI	GAATGC	1 cut(s)	1121
PdmI	GAANNNNTTC	1 cut(s)	1121
PfeI	GAWTC	7 cut(s)	63, 394, 583, 646, 698, 730, 1356
PfoI	TCCNGGA	1 cut(s)	1125
PkrI	GCNGC	7 cut(s)	7, 337, 444, 1000, 1069, 1369, 1393
PleI	GAGTC	4 cut(s)	254, 907, 1026, 1282
PmaCI	CACGTG	1 cut(s)	1347
PmlI	CACGTG	1 cut(s)	1347
PpsI	GAGTC	4 cut(s)	254, 907, 1026, 1282
Ppu21I	YACGTR	1 cut(s)	1347
PshAI	GACNNNNGTC	1 cut(s)	1302
Psp6I	CCWGG	5 cut(s)	288, 410, 565, 895, 1190
PspCI	CACGTG	1 cut(s)	1347
PspGI	CCWGG	5 cut(s)	288, 410, 565, 895, 1190
PspN4I	GGNNCC	3 cut(s)	73, 523, 1036
PspPI	GGNCC	1 cut(s)	980
PstNI	CAGNNNCTG	4 cut(s)	197, 761, 1106, 1244
PsuI	RGATCY	3 cut(s)	71, 682, 1179
PvuII	CAGCTG	1 cut(s)	1394
RruI	TCGCGA	1 cut(s)	399
RsaI	GTAC	3 cut(s)	416, 1320, 1386
RsaNI	GTAC	3 cut(s)	415, 1319, 1385
SalI	GTCGAC	1 cut(s)	224
SaqAI	TTAA	2 cut(s)	1407, 1427
SatI	GCNGC	7 cut(s)	6, 336, 443, 999, 1068, 1368, 1392
Sau3AI	GATC	7 cut(s)	71, 161, 483, 499, 504, 682, 1179
Sau96I	GGNCC	1 cut(s)	980
SchI	GAGTC	4 cut(s)	255, 907, 1027, 1283
ScrFI	CCNGG	9 cut(s)	69, 290, 412, 567, 897, 979, 1127, 1192, 1323
SduI	GDGCHC	2 cut(s)	242, 321
SexAI	ACCWGGT	1 cut(s)	410
SfaNI	GCATC	6 cut(s)	622, 669, 820, 896, 1318, 1379
SfcI	CTRYAG	1 cut(s)	1039
SfuI	TTCGAA	2 cut(s)	54, 266
SpeI	ACTAGT	1 cut(s)	1315
Sse9I	AATT	7 cut(s)	453, 775, 855, 1260, 1267, 1404, 1424
SsiI	CCGC	4 cut(s)	6, 185, 380, 998
SspMI	CTAG	2 cut(s)	816, 1316
StyD4I	CCNGG	9 cut(s)	67, 288, 410, 565, 895, 977, 1125, 1190, 1321
StyI	CCWWGG	1 cut(s)	815
TaaI	ACNGT	3 cut(s)	152, 274, 1384
TaiI	ACGT	2 cut(s)	231, 1349
TaqI	TCGA	7 cut(s)	26, 54, 225, 266, 328, 354, 696
TasI	AATT	7 cut(s)	453, 775, 855, 1260, 1267, 1404, 1424
TauI	GCSGC	2 cut(s)	8, 1001
TfiI	GAWTC	7 cut(s)	63, 394, 583, 646, 698, 730, 1356
Tru1I	TTAA	2 cut(s)	1407, 1427
Tru9I	TTAA	2 cut(s)	1407, 1427
TscAI	CASTG	2 cut(s)	198, 715
TseFI	GTSAC	2 cut(s)	193, 1275
TseI	GCWGC	5 cut(s)	335, 442, 1067, 1367, 1391
Tsp45I	GTSAC	2 cut(s)	193, 1275
TspDTI	ATGAA	2 cut(s)	852, 861
TspGWI	ACGGA	1 cut(s)	244
TspRI	CASTG	2 cut(s)	198, 715
XapI	RAATTY	2 cut(s)	775, 1267
XceI	RCATGY	1 cut(s)	904
XcmI	CCANNNNNNNNNTGG	1 cut(s)	594
XmaJI	CCTAGG	1 cut(s)	815
XmiI	GTMKAC	2 cut(s)	225, 765
XmnI	GAANNNNTTC	1 cut(s)	1121
XspI	CTAG	2 cut(s)	816, 1316
ZraI	GACGTC	1 cut(s)	229
Zsp2I	ATGCAT	1 cut(s)	1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.