Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013158

Physical Location & Seq

Genomic Coordinates Reverse (-)

27483935 .. 27488645

Gene Structure 4711 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48855

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGCCACTTCCTCCTCCTCCTCCACCATCGCACGCCTCAGCTTCTCCACAACCCGATTCCCGGGACCCGAACCCGGCCCCGACCCGAAATCCCTATCTTTCCATTCTCGCCCCCGCACGTGTCTTCCTCTCAAGCACAGCTCGGAACGACCGTCAAGATCTGTTGTGAGGGCAGTCGCGGTTACTGGGAGTGACCAAGCAATGGAGATCGATATTTCTCTCAGCCCGAGAGTCAACTCCATCAAGCCGTCGAAGACCGTCGCGATCACCGACCAGGCCACCGCTCTCGTCCAGGCCGGCGTCCCCGTGATCCGATTAGCCGCCGGCGAGCCCGATTTCGATACTCCTTCTGCCGTGGCTGAGGCGGGGATCAATGCGATTCGGGAGGGGTATACCCGGTACACACCAAATGCAGGGACTTTGGAGCTGCGCCAGGCGATTTGTCATAAGCTGCAAGAGGAGAACGGGATATCTTACGCACCGGATCAGGTTTTGGTTAGTAATGGAGCCAAGCAGTGTATTGATCAAGCAGTGCAGGCAGTTTGTGCACCAGGAGATGAGGTTATAATTCCAGCTCCATTTTGGGTGAGTTACCCGGAAATTGCAAGGAAGGCTGATGCAACTCCTGTGATTCTTCAAACGAGCATATCTGAGAATTTTCTATTGGATCCCAAGGTTCTCGAGTCCAAGCTCACTGAAAGGTCAAGAGTGCTGATTCTTTGTTCTCCATCCAACCCAACAGGATCTGTTTACCCCAAGAAATTGCTTGAGGATATTGCTCAAATTGTAGCAAGGCATCCCAGGCTTCTGGTCCTGTCTGATGAAATTTATGAGCACATAATATATGCACCAGCAACTCACACGAGCTTTGCATCTTTGCCAGGCATGTGGGAGAGGACTTTGACAGTCAATGGGTTTTCTAAGGCCTTTGCAATGACTGGTTGGCGACTTGGATATATTGCTGGTCCTAAACACTTTATCGCAGCATGTAATAAGATCCAGAGTCAGTCCACCTCAGGTGCTAGTAGCATATCACAGAAAGCAGGAGTTGCAGCCTTGGGTCTTGGCTATGCTGGTGGAGAGGCAGTTTCTATCATGGTGAAAGCATTCAGAGAGCGACGGGATTTCTTGGTGAAAAGCTTAGGTGAACTTGCTGGTGTTAAGATTTCAGAACCCAAGGGAGCTTTCTATCTCTTCCTCGATTTCAGCTGTTACTATGGAACAGAGGCTGATGGGTTTGGTAAAATAGAGGATTCTGAGTCCTTATGCAAATACCTGCTTGACAAGGGTCAGGTTGCACTAGTGCCGGGGGATGCATTTGGAGATGACACCTGTATACGAATCTCCTATGCAGCATCCCTCTCAACCGTACAGGCAGCTGTGGAAAGAATTAAGAAGGCACTCATAGTGCTGAAGCCTGCTGCCCGTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004069 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008483 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009095 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016740 GO:0016769 GO:0019438 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0033853 GO:0033854 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00350 ko00360 ko00400 ko00950 ko00960 ko01100 ko01110 ko01130 ko01230 map00350 map00360 map00400 map00950 map00960 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

477

Amino Acids

51.13

Weight (kDa)

8.26

Isoelectric Point (pI)

40.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_1_2	PF00155	102 - 464	4.3e-75	Aminotransferase class I and II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22250 AT2G22250 AT2G22250
fragaria_vesca	FvH4_1g21500
malus_domestica	MD01G1024400.v1.1 MD15G1329000.v1.1
prunus_persica	Prupe.6G179700_v2.0.a1
pyrus_communis	pycom01g05210 pycom01g05220 pycom15g29680 pycom15g29690 pycom15g29700
rosa_chinensis	RchiOBHm_Chr2g0115381
rosa_laevigata	RLG00000018181
rosa_multiflora	Rmu_sc0001897.1_g000009
rosa_roxburghii	Rroxscaffold_2G00130870
rosa_rugosa	Rorug02G0196000
rosa_wichuraiana	Rw2G019870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	566
Acc36I	ACCTGC	1 cut(s)	1284
AccB7I	CCANNNNNTGG	1 cut(s)	202
AccBSI	CCGCTC	1 cut(s)	284
AccI	GTMKAC	2 cut(s)	392, 1336
AccII	CGCG	2 cut(s)	179, 263
AciI	CCGC	5 cut(s)	115, 179, 282, 321, 365
AclWI	GGATC	7 cut(s)	304, 377, 492, 662, 675, 751, 991
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	655, 825
AcuI	CTGAAG	1 cut(s)	1433
AcvI	CACGTG	1 cut(s)	120
AcyI	GRCGYC	1 cut(s)	300
AfaI	GTAC	2 cut(s)	401, 1371
AfiI	CCNNNNNNNGG	4 cut(s)	61, 74, 202, 413
AflIII	ACRYGT	1 cut(s)	119
AgsI	TTSAA	1 cut(s)	638
AhlI	ACTAGT	1 cut(s)	1300
AjnI	CCWGG	6 cut(s)	273, 291, 432, 550, 800, 880
AjuI	GAANNNNNNNTTGG	4 cut(s)	647, 679, 1169, 1201
Alw21I	GWGCWC	2 cut(s)	550, 837
Alw44I	GTGCAC	1 cut(s)	546
AlwI	GGATC	7 cut(s)	304, 377, 492, 662, 675, 751, 991
AlwNI	CAGNNNCTG	2 cut(s)	746, 1229
Ama87I	CYCGRG	3 cut(s)	61, 226, 680
AoxI	GGCC	5 cut(s)	3, 76, 276, 294, 924
ApaLI	GTGCAC	1 cut(s)	546
ApeKI	GCWGC	7 cut(s)	427, 451, 983, 1052, 1352, 1376, 1421
ApoI	RAATTY	2 cut(s)	655, 825
Asp700I	GAANNNNTTC	1 cut(s)	1106
AspLEI	GCGC	1 cut(s)	432
AspS9I	GGNCC	4 cut(s)	65, 77, 811, 965
AsuC2I	CCSGG	6 cut(s)	62, 63, 75, 397, 596, 1308
AsuHPI	GGTGA	5 cut(s)	259, 598, 1111, 1144, 1157
AvaI	CYCGRG	3 cut(s)	61, 226, 680
AvaII	GGWCC	3 cut(s)	65, 811, 965
AxyI	CCTNAGG	1 cut(s)	1015
BaeGI	GKGCMC	1 cut(s)	550
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	667
BanII	GRGCYC	1 cut(s)	333
BauI	CACGAG	1 cut(s)	862
BbrPI	CACGTG	1 cut(s)	120
BbsI	GAAGAC	2 cut(s)	116, 260
Bbv12I	GWGCWC	2 cut(s)	550, 837
BbvCI	CCTCAGC	2 cut(s)	38, 360
BbvI	GCAGC	7 cut(s)	414, 438, 995, 1064, 1364, 1388, 1408
BccI	CCATC	4 cut(s)	35, 248, 736, 1226
BceAI	ACGGC	2 cut(s)	232, 338
BciT130I	CCWGG	6 cut(s)	275, 293, 434, 552, 802, 882
BclI	TGATCA	1 cut(s)	523
BcnI	CCSGG	6 cut(s)	62, 63, 75, 397, 596, 1308
BcuI	ACTAGT	1 cut(s)	1300
BfaI	CTAG	2 cut(s)	1023, 1301
BfuAI	ACCTGC	1 cut(s)	1284
BglII	AGATCT	1 cut(s)	158
BisI	GCNGC	8 cut(s)	321, 428, 452, 984, 1053, 1353, 1377, 1422
BlsI	GCNGC	8 cut(s)	322, 429, 453, 985, 1054, 1354, 1378, 1423
Bme18I	GGWCC	3 cut(s)	65, 811, 965
BmeT110I	CYCGRG	3 cut(s)	61, 226, 680
BmgT120I	GGNCC	4 cut(s)	65, 77, 811, 965
BmiI	GGNNCC	5 cut(s)	66, 67, 79, 508, 669
BmrI	ACTGGG	1 cut(s)	195
BmsI	GCATC	5 cut(s)	607, 805, 881, 1303, 1364
BmuI	ACTGGG	1 cut(s)	195
BoxI	GACNNNNGTC	1 cut(s)	1287
BpiI	GAAGAC	2 cut(s)	116, 260
Bpu10I	CCTNAGC	3 cut(s)	38, 360, 1141
BpuEI	CTTGAG	2 cut(s)	116, 788
BpuMI	CCSGG	6 cut(s)	62, 63, 75, 397, 596, 1308
Bsa29I	ATCGAT	1 cut(s)	210
BsaAI	YACGTR	1 cut(s)	120
BsaHI	GRCGYC	1 cut(s)	300
BsaJI	CCNNGG	7 cut(s)	61, 354, 672, 800, 1056, 1176, 1307
BsaWI	WCCGGW	1 cut(s)	481
BsaXI	ACNNNNNCTCC	4 cut(s)	546, 576, 1071, 1101
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 74, 202, 413
Bse118I	RCCGGY	2 cut(s)	296, 323
Bse1I	ACTGG	2 cut(s)	190, 943
Bse21I	CCTNAGG	1 cut(s)	1015
Bse3DI	GCAATG	2 cut(s)	207, 939
BseBI	CCWGG	6 cut(s)	275, 293, 434, 552, 802, 882
BseCI	ATCGAT	1 cut(s)	210
BseDI	CCNNGG	7 cut(s)	61, 354, 672, 800, 1056, 1176, 1307
BseGI	GGATG	4 cut(s)	728, 796, 1318, 1355
BseLI	CCNNNNNNNGG	4 cut(s)	61, 74, 202, 413
BseMI	GCAATG	2 cut(s)	207, 939
BseMII	CTCAG	6 cut(s)	52, 235, 351, 642, 1029, 1248
BseNI	ACTGG	2 cut(s)	190, 943
BseRI	GAGGAG	4 cut(s)	4, 7, 10, 473
BseSI	GKGCMC	1 cut(s)	550
BseXI	GCAGC	7 cut(s)	414, 438, 995, 1064, 1364, 1388, 1408
BsgI	GTGCAG	1 cut(s)	554
Bsh1236I	CGCG	2 cut(s)	179, 263
Bsh1285I	CGRYCG	1 cut(s)	152
BshFI	GGCC	5 cut(s)	5, 78, 278, 296, 926
BshVI	ATCGAT	1 cut(s)	210
BsiEI	CGRYCG	1 cut(s)	152
BsiHKAI	GWGCWC	2 cut(s)	550, 837
BsiHKCI	CYCGRG	3 cut(s)	61, 226, 680
BsiSI	CCGG	8 cut(s)	62, 75, 297, 324, 397, 482, 596, 1307
BslFI	GGGAC	3 cut(s)	78, 287, 430
BslI	CCNNNNNNNGG	4 cut(s)	61, 74, 202, 413
BsmFI	GGGAC	3 cut(s)	78, 287, 430
BsmI	GAATGC	1 cut(s)	1106
BsnI	GGCC	5 cut(s)	5, 78, 278, 296, 926
BsoBI	CYCGRG	3 cut(s)	61, 226, 680
Bsp1286I	GDGCHC	3 cut(s)	333, 550, 837
Bsp68I	TCGCGA	1 cut(s)	263
BspACI	CCGC	5 cut(s)	115, 179, 282, 321, 365
BspANI	GGCC	5 cut(s)	5, 78, 278, 296, 926
BspCNI	CTCAG	6 cut(s)	51, 234, 352, 643, 1028, 1249
BspDI	ATCGAT	1 cut(s)	210
BspFNI	CGCG	2 cut(s)	179, 263
BspLI	GGNNCC	5 cut(s)	66, 67, 79, 508, 669
BspMI	ACCTGC	1 cut(s)	1284
BspPI	GGATC	7 cut(s)	304, 377, 492, 662, 675, 751, 991
BsrBI	CCGCTC	1 cut(s)	284
BsrDI	GCAATG	2 cut(s)	207, 939
BsrFI	RCCGGY	2 cut(s)	296, 323
BsrI	ACTGG	2 cut(s)	190, 943
BssAI	RCCGGY	2 cut(s)	296, 323
BssECI	CCNNGG	7 cut(s)	61, 354, 672, 800, 1056, 1176, 1307
BssNAI	GTATAC	2 cut(s)	393, 1337
BssNI	GRCGYC	1 cut(s)	300
BssSI	CACGAG	1 cut(s)	862
BssT1I	CCWWGG	3 cut(s)	672, 1056, 1176
Bst1107I	GTATAC	2 cut(s)	393, 1337
Bst2BI	CACGAG	1 cut(s)	862
Bst2UI	CCWGG	6 cut(s)	275, 293, 434, 552, 802, 882
Bst4CI	ACNGT	4 cut(s)	153, 259, 907, 1369
Bst6I	CTCTTC	1 cut(s)	1199
BstACI	GRCGYC	1 cut(s)	300
BstAPI	GCANNNNNTGC	2 cut(s)	545, 1049
BstBAI	YACGTR	1 cut(s)	120
BstC8I	GCNNGC	6 cut(s)	34, 298, 325, 329, 537, 1419
BstDEI	CTNAG	8 cut(s)	38, 221, 360, 651, 921, 1015, 1141, 1257
BstDSI	CCRYGG	1 cut(s)	354
BstF5I	GGATG	4 cut(s)	728, 796, 1318, 1355
BstFNI	CGCG	2 cut(s)	179, 263
BstHHI	GCGC	1 cut(s)	432
BstMCI	CGRYCG	1 cut(s)	152
BstMWI	GCNNNNNNNGC	5 cut(s)	536, 545, 611, 802, 1049
BstNI	CCWGG	6 cut(s)	275, 293, 434, 552, 802, 882
BstNSI	RCATGY	2 cut(s)	889, 990
BstPAI	GACNNNNGTC	1 cut(s)	1287
BstSLI	GKGCMC	1 cut(s)	550
BstUI	CGCG	2 cut(s)	179, 263
BstV1I	GCAGC	7 cut(s)	414, 438, 995, 1064, 1364, 1388, 1408
BstV2I	GAAGAC	2 cut(s)	116, 260
BstX2I	RGATCY	4 cut(s)	158, 667, 743, 996
BstXI	CCANNNNNNTGG	2 cut(s)	808, 888
BstYI	RGATCY	4 cut(s)	158, 667, 743, 996
BstZ17I	GTATAC	2 cut(s)	393, 1337
Bsu15I	ATCGAT	1 cut(s)	210
Bsu36I	CCTNAGG	1 cut(s)	1015
BsuRI	GGCC	5 cut(s)	5, 78, 278, 296, 926
BsuTUI	ATCGAT	1 cut(s)	210
BtgI	CCRYGG	1 cut(s)	354
BtgZI	GCGATG	1 cut(s)	13
BtsCI	GGATG	4 cut(s)	728, 796, 1318, 1355
BtsI	GCAGTG	2 cut(s)	521, 537
BtsIMutI	CAGTG	3 cut(s)	521, 537, 693
BtuMI	TCGCGA	1 cut(s)	263
BveI	ACCTGC	1 cut(s)	1284
Cac8I	GCNNGC	6 cut(s)	34, 298, 325, 329, 537, 1419
CaiI	CAGNNNCTG	2 cut(s)	746, 1229
CfoI	GCGC	1 cut(s)	432
Cfr10I	RCCGGY	2 cut(s)	296, 323
Cfr13I	GGNCC	4 cut(s)	65, 77, 811, 965
Cfr9I	CCCGGG	1 cut(s)	61
ClaI	ATCGAT	1 cut(s)	210
CseI	GACGC	1 cut(s)	289
Csp6I	GTAC	2 cut(s)	400, 1370
CviAII	CATG	3 cut(s)	886, 987, 1096
CviQI	GTAC	2 cut(s)	400, 1370
DdeI	CTNAG	8 cut(s)	38, 221, 360, 651, 921, 1015, 1141, 1257
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1199
EarI	CTCTTC	1 cut(s)	1199
Eco130I	CCWWGG	3 cut(s)	672, 1056, 1176
Eco147I	AGGCCT	1 cut(s)	926
Eco24I	GRGCYC	1 cut(s)	333
Eco32I	GATATC	1 cut(s)	471
Eco47I	GGWCC	3 cut(s)	65, 811, 965
Eco57I	CTGAAG	1 cut(s)	1433
Eco72I	CACGTG	1 cut(s)	120
Eco81I	CCTNAGG	1 cut(s)	1015
Eco88I	CYCGRG	3 cut(s)	61, 226, 680
EcoO109I	RGGNCCY	1 cut(s)	65
EcoRII	CCWGG	6 cut(s)	273, 291, 432, 550, 800, 880
EcoRV	GATATC	1 cut(s)	471
EcoT14I	CCWWGG	3 cut(s)	672, 1056, 1176
EcoT22I	ATGCAT	1 cut(s)	1318
EcoT38I	GRGCYC	1 cut(s)	333
ErhI	CCWWGG	3 cut(s)	672, 1056, 1176
FaeI	CATG	3 cut(s)	889, 990, 1099
FaqI	GGGAC	3 cut(s)	78, 287, 430
FatI	CATG	3 cut(s)	885, 986, 1095
FauI	CCCGC	2 cut(s)	122, 358
FbaI	TGATCA	1 cut(s)	523
FblI	GTMKAC	2 cut(s)	392, 1336
Fnu4HI	GCNGC	8 cut(s)	321, 428, 452, 984, 1053, 1353, 1377, 1422
FokI	GGATG	4 cut(s)	715, 783, 1325, 1342
FriOI	GRGCYC	1 cut(s)	333
Fsp4HI	GCNGC	8 cut(s)	321, 428, 452, 984, 1053, 1353, 1377, 1422
FspBI	CTAG	2 cut(s)	1023, 1301
GlaI	GCGC	1 cut(s)	431
GluI	GCNGC	8 cut(s)	321, 428, 452, 984, 1053, 1353, 1377, 1422
HaeIII	GGCC	5 cut(s)	5, 78, 278, 296, 926
HapII	CCGG	8 cut(s)	62, 75, 297, 324, 397, 482, 596, 1307
HgaI	GACGC	1 cut(s)	289
HhaI	GCGC	1 cut(s)	432
Hin1I	GRCGYC	1 cut(s)	300
Hin1II	CATG	3 cut(s)	889, 990, 1099
Hin6I	GCGC	1 cut(s)	430
HinP1I	GCGC	1 cut(s)	430
HincII	GTYRAC	1 cut(s)	235
HindII	GTYRAC	1 cut(s)	235
HindIII	AAGCTT	1 cut(s)	1138
HpaII	CCGG	8 cut(s)	62, 75, 297, 324, 397, 482, 596, 1307
HphI	GGTGA	5 cut(s)	259, 598, 1111, 1144, 1157
Hpy166II	GTNNAC	8 cut(s)	235, 393, 402, 548, 751, 1011, 1148, 1337
Hpy188I	TCNGA	7 cut(s)	145, 314, 652, 820, 1112, 1171, 1258
Hpy188III	TCNNGA	6 cut(s)	156, 262, 383, 680, 705, 1000
Hpy8I	GTNNAC	8 cut(s)	235, 393, 402, 548, 751, 1011, 1148, 1337
Hpy99I	CGWCG	3 cut(s)	253, 263, 1122
HpyAV	CCTTC	3 cut(s)	357, 604, 1390
HpyCH4III	ACNGT	4 cut(s)	153, 259, 907, 1369
HpyCH4IV	ACGT	1 cut(s)	119
HpyF10VI	GCNNNNNNNGC	5 cut(s)	536, 545, 611, 802, 1049
HpyF3I	CTNAG	8 cut(s)	38, 221, 360, 651, 921, 1015, 1141, 1257
HpySE526I	ACGT	1 cut(s)	119
Hsp92I	GRCGYC	1 cut(s)	300
Hsp92II	CATG	3 cut(s)	889, 990, 1099
HspAI	GCGC	1 cut(s)	430
KflI	GGGWCCC	1 cut(s)	65
KroI	GCCGGC	2 cut(s)	296, 323
KroNI	GCCGGC	2 cut(s)	298, 325
Ksp22I	TGATCA	1 cut(s)	523
LmnI	GCTCC	4 cut(s)	424, 506, 580, 1181
Lsp1109I	GCAGC	7 cut(s)	414, 438, 995, 1064, 1364, 1388, 1408
LweI	GCATC	5 cut(s)	607, 805, 881, 1303, 1364
MaeI	CTAG	2 cut(s)	1023, 1301
MaeII	ACGT	1 cut(s)	119
MaeIII	GTNAC	4 cut(s)	181, 191, 590, 1211
MbiI	CCGCTC	1 cut(s)	284
MboII	GAAGA	4 cut(s)	116, 265, 626, 1186
MflI	RGATCY	4 cut(s)	158, 667, 743, 996
MhlI	GDGCHC	3 cut(s)	333, 550, 837
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	7 cut(s)	567, 600, 655, 761, 783, 825, 1389
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	240, 692, 1012, 1268
MmeI	TCCRAC	1 cut(s)	756
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1318
MreI	CGCCGGCG	1 cut(s)	323
MroNI	GCCGGC	2 cut(s)	296, 323
MroXI	GAANNNNTTC	1 cut(s)	1106
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	1161, 1392
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	1209, 1379
MspI	CCGG	8 cut(s)	62, 75, 297, 324, 397, 482, 596, 1307
Mva1269I	GAATGC	1 cut(s)	1106
MvaI	CCWGG	6 cut(s)	275, 293, 434, 552, 802, 882
MvnI	CGCG	2 cut(s)	179, 263
MwoI	GCNNNNNNNGC	5 cut(s)	536, 545, 611, 802, 1049
NaeI	GCCGGC	2 cut(s)	298, 325
NciI	CCSGG	6 cut(s)	62, 63, 75, 397, 596, 1308
NgoMIV	GCCGGC	2 cut(s)	296, 323
NlaIII	CATG	3 cut(s)	889, 990, 1099
NlaIV	GGNNCC	5 cut(s)	66, 67, 79, 508, 669
NmuCI	GTSAC	1 cut(s)	191
NruI	TCGCGA	1 cut(s)	263
NsiI	ATGCAT	1 cut(s)	1318
NspI	RCATGY	2 cut(s)	889, 990
PaeR7I	CTCGAG	1 cut(s)	680
PceI	AGGCCT	1 cut(s)	926
PcsI	WCGNNNNNNNCGW	2 cut(s)	149, 267
PctI	GAATGC	1 cut(s)	1106
PdiI	GCCGGC	2 cut(s)	298, 325
PdmI	GAANNNNTTC	1 cut(s)	1106
PfeI	GAWTC	6 cut(s)	57, 379, 631, 715, 1253, 1341
PflMI	CCANNNNNTGG	1 cut(s)	202
PkrI	GCNGC	8 cut(s)	322, 429, 453, 985, 1054, 1354, 1378, 1423
PleI	GAGTC	4 cut(s)	239, 691, 1011, 1267
PmaCI	CACGTG	1 cut(s)	120
PmlI	CACGTG	1 cut(s)	120
PpsI	GAGTC	4 cut(s)	239, 691, 1011, 1267
Ppu21I	YACGTR	1 cut(s)	120
PpuMI	RGGWCCY	1 cut(s)	65
PshAI	GACNNNNGTC	1 cut(s)	1287
PsiI	TTATAA	1 cut(s)	566
Psp5II	RGGWCCY	1 cut(s)	65
Psp6I	CCWGG	6 cut(s)	273, 291, 432, 550, 800, 880
PspCI	CACGTG	1 cut(s)	120
PspGI	CCWGG	6 cut(s)	273, 291, 432, 550, 800, 880
PspN4I	GGNNCC	5 cut(s)	66, 67, 79, 508, 669
PspPI	GGNCC	4 cut(s)	65, 77, 811, 965
PspPPI	RGGWCCY	1 cut(s)	65
PstNI	CAGNNNCTG	2 cut(s)	746, 1229
PsuI	RGATCY	4 cut(s)	158, 667, 743, 996
PvuII	CAGCTG	2 cut(s)	1209, 1379
RruI	TCGCGA	1 cut(s)	263
RsaI	GTAC	2 cut(s)	401, 1371
RsaNI	GTAC	2 cut(s)	400, 1370
SaqAI	TTAA	2 cut(s)	1161, 1392
SatI	GCNGC	8 cut(s)	321, 428, 452, 984, 1053, 1353, 1377, 1422
Sau96I	GGNCC	4 cut(s)	65, 77, 811, 965
SchI	GAGTC	4 cut(s)	240, 692, 1012, 1268
SduI	GDGCHC	3 cut(s)	333, 550, 837
SfaNI	GCATC	5 cut(s)	607, 805, 881, 1303, 1364
Sfr274I	CTCGAG	1 cut(s)	680
SgrAI	CRCCGGYG	1 cut(s)	323
SinI	GGWCC	3 cut(s)	65, 811, 965
SlaI	CTCGAG	1 cut(s)	680
SmaI	CCCGGG	1 cut(s)	63
SmlI	CTYRAG	3 cut(s)	131, 680, 767
SmoI	CTYRAG	3 cut(s)	131, 680, 767
SpeI	ACTAGT	1 cut(s)	1300
Sse9I	AATT	7 cut(s)	567, 600, 655, 761, 783, 825, 1389
SseBI	AGGCCT	1 cut(s)	926
SsiI	CCGC	5 cut(s)	115, 179, 282, 321, 365
SspMI	CTAG	2 cut(s)	1023, 1301
StuI	AGGCCT	1 cut(s)	926
StyI	CCWWGG	3 cut(s)	672, 1056, 1176
TaaI	ACNGT	4 cut(s)	153, 259, 907, 1369
TaiI	ACGT	1 cut(s)	122
TaqI	TCGA	5 cut(s)	210, 251, 339, 681, 1200
TasI	AATT	7 cut(s)	567, 600, 655, 761, 783, 825, 1389
TauI	GCSGC	1 cut(s)	323
TfiI	GAWTC	6 cut(s)	57, 379, 631, 715, 1253, 1341
Tru1I	TTAA	2 cut(s)	1161, 1392
Tru9I	TTAA	2 cut(s)	1161, 1392
TscAI	CASTG	3 cut(s)	521, 537, 700
TseFI	GTSAC	1 cut(s)	191
TseI	GCWGC	7 cut(s)	427, 451, 983, 1052, 1352, 1376, 1421
Tsp45I	GTSAC	1 cut(s)	191
TspDTI	ATGAA	1 cut(s)	837
TspMI	CCCGGG	1 cut(s)	61
TspRI	CASTG	3 cut(s)	521, 537, 700
Van91I	CCANNNNNTGG	1 cut(s)	202
VneI	GTGCAC	1 cut(s)	546
VpaK11BI	GGWCC	3 cut(s)	65, 811, 965
XapI	RAATTY	2 cut(s)	655, 825
XceI	RCATGY	2 cut(s)	889, 990
XcmI	CCANNNNNNNNNTGG	1 cut(s)	579
XhoI	CTCGAG	1 cut(s)	680
XmaI	CCCGGG	1 cut(s)	61
XmiI	GTMKAC	2 cut(s)	392, 1336
XmnI	GAANNNNTTC	1 cut(s)	1106
XspI	CTAG	2 cut(s)	1023, 1301
Zsp2I	ATGCAT	1 cut(s)	1318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.