MD15G1329000.v1.1

Bifunctional aspartate aminotransferase and glutamate aspartate-prephenate

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
36199432 .. 36203958
4527 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1329000.v1.1.491

Sequence Viewer

Length: 1455 bp
ATGGCCGCCTTTTCCCTCCAAACCTCCTCCTCCTCCTCCGGTATTGCCCGTCTCAGTTTCGAAACCCGCATCCCCGGATCCGATTTGGGTGCAGACCCGAAATCCGTTTATTTTCCTTGTCAGCCTCGTGTGCTTCCTCTTAAGCATCGCTGCAACGGTAAGAGTAAATCAAGAGGAGGAGTGGTGTTGGCAGTGGCAGTGAGTGGGAATGACCAAACCCATGTGGAAGTTGACGTTTCTCTGAGCCCACGAGTCAACTCCGTCAAGCCTTCCAAGACTGTTGCCATTACTGACCAGGCCACGGCTCTCGTGCAAGCCGGAGTGCCCGTCATTCGATTGGCTGCCGGCGAACCTGATTTCGATACCCCTTCCGTCATAGCTGAGGCCGGTATTAATGCGATTCGTGAAGGATTCACGAGGTACACACCAAATGCAGGCACTTTGGAGCTGCGCCAAGCAATTTGTCATAAGCTCAAAGAGGAGAATGGAATCACTTACACACCGGATCAGATTGTAGTTAGCAATGGAGCCAAGCAGAGCATTGTTCAAGCTGTGCTTGCAGTTTGTTCCCCAGGAGACGAGGTTATAATTCCGGCTCCATTTTGGGTGAGTTACCCTGAAATGGCAAGGATGGCCGATGCAACTCCTGTGATTCTTCCAACGAGCATCTCCAATGATTTTCTCTTGGATCCAAAACTTCTCGAATCCAAACTCACGGAGAAGTCAAGACTGTTGATTCTTTGTTCTCCATCCAACCCCACAGGGTCTGTTTACCCTAAGAGTTTGCTTCAAGAGATTGCTAAGATTGTAGCAAAGCATCCCAGGCTTCTGGTTATTTCTGATGAAATATATGAACACATAATTTACGCACCGGCAACTCACACAAGCTTTGCATCCTTGCCAGGCATGTGGGAGAGGACTCTGACAATCAATGGGTTTTCCAAGGCTTTTGCAATGACTGGTTGGCGACTTGGATATATTGCCGGGCCTAAACACTTTGTTACGGCATGTGGAAAGCTCCAGAGTCAGTTCACCTCAGGTGCCAGTAGTATATCACAGAAAGCAGGAGTTGCTGCCTTAGGTCTCGGTTATGCTGGTGGAGAGGCAGTTACTACTATGGTTAAAGCGTTCAGGGAGCGACGGGATTTCTTGGTCAAAAGCTTTGGCAAACTTTCAGGTGTCAGGATTTCAGAACCCAGGGGAGCTTTCTATCTCTTCATAGATTTCAGCGCTTACTATGGAACGGAGGCTGAAGGATTTGGTAAAATTGAGAATTCAGAGTCCTTATGCCGTTACCTACTTGACAAGGGCCAGGTTGCACTAGTACCAGGAGATGCGTTTGGAGATGATACGTGCATACGAATCTCCTATGCAGCATCCCTTCCCACCCTACAGGCAGCTGTGGAGAGAATTAAGAAAGCACTTGTTGAACTAAAGCCCTCAGTTGGTGTTTAA

Protein Analysis

485

Amino Acids

51.82

Weight (kDa)

8.75

Isoelectric Point (pI)

30.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 109 - 471 4e-75 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013158)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
AccB1I GGYRCC 1 cut(s) 1040
AciI CCGC 2 cut(s) 6, 67
AclWI GGATC 5 cut(s) 72, 85, 513, 683, 696
AcoI YGGCCR 2 cut(s) 3, 633
AcsI RAATTY 1 cut(s) 1273
AcuI CTGAAG 1 cut(s) 1272
AfaI GTAC 2 cut(s) 422, 1326
AfeI AGCGCT 1 cut(s) 1231
AfiI CCNNNNNNNGG 4 cut(s) 301, 434, 622, 1445
AflII CTTAAG 1 cut(s) 140
AgsI TTSAA 3 cut(s) 548, 791, 1430
AhlI ACTAGT 1 cut(s) 1321
AjnI CCWGG 7 cut(s) 294, 571, 821, 901, 1196, 1311, 1327
AluBI AGCT 9 cut(s) 380, 448, 472, 551, 888, 1018, 1161, 1205, 1400
AluI AGCT 9 cut(s) 380, 448, 472, 551, 888, 1018, 1161, 1205, 1400
Alw26I GTCTC 3 cut(s) 56, 570, 1088
AlwI GGATC 5 cut(s) 72, 85, 513, 683, 696
AlwNI CAGNNNCTG 1 cut(s) 767
Aor51HI AGCGCT 1 cut(s) 1231
AoxI GGCC 6 cut(s) 3, 297, 384, 633, 986, 1309
ApeKI GCWGC 6 cut(s) 150, 341, 448, 1073, 1373, 1397
ApoI RAATTY 1 cut(s) 1273
AseI ATTAAT 1 cut(s) 393
AspLEI GCGC 2 cut(s) 453, 1232
AspS9I GGNCC 2 cut(s) 986, 1309
AsuC2I CCSGG 2 cut(s) 75, 985
AsuHPI GGTGA 2 cut(s) 619, 1024
AsuII TTCGAA 1 cut(s) 60
AxyI CCTNAGG 2 cut(s) 1036, 1078
BaeGI GKGCMC 1 cut(s) 327
BamHI GGATCC 2 cut(s) 77, 688
BanI GGYRCC 1 cut(s) 1040
BanII GRGCYC 1 cut(s) 248
BauI CACGAG 4 cut(s) 126, 249, 308, 415
BbvCI CCTCAGC 1 cut(s) 381
BbvI GCAGC 6 cut(s) 137, 328, 435, 1060, 1385, 1409
BccI CCATC 2 cut(s) 625, 757
BceAI ACGGC 3 cut(s) 318, 1020, 1275
BcgI CGANNNNNNTGC 2 cut(s) 71, 105
BciT130I CCWGG 7 cut(s) 296, 573, 823, 903, 1198, 1313, 1329
BcnI CCSGG 2 cut(s) 75, 985
BcoDI GTCTC 3 cut(s) 56, 570, 1088
BcuI ACTAGT 1 cut(s) 1321
BfaI CTAG 1 cut(s) 1322
BfmI CTRYAG 1 cut(s) 1391
BfoI RGCGCY 1 cut(s) 1233
BfrI CTTAAG 1 cut(s) 140
BisI GCNGC 7 cut(s) 6, 151, 342, 449, 1074, 1374, 1398
BlsI GCNGC 7 cut(s) 7, 152, 343, 450, 1075, 1375, 1399
Bme1390I CCNGG 9 cut(s) 75, 296, 573, 823, 903, 985, 1198, 1313, 1329
BmgT120I GGNCC 2 cut(s) 986, 1309
BmiI GGNNCC 5 cut(s) 79, 529, 597, 690, 1042
BmrFI CCNGG 9 cut(s) 75, 296, 573, 823, 903, 985, 1198, 1313, 1329
BmsI GCATC 8 cut(s) 78, 154, 628, 675, 826, 902, 1324, 1385
BpmI CTGGAG 1 cut(s) 1004
Bpu10I CCTNAGC 1 cut(s) 381
Bpu14I TTCGAA 1 cut(s) 60
BpuMI CCSGG 2 cut(s) 75, 985
BsaAI YACGTR 1 cut(s) 1353
BsaI GGTCTC 1 cut(s) 1088
BsaJI CCNNGG 7 cut(s) 73, 300, 571, 821, 942, 1196, 1197
BsaWI WCCGGW 2 cut(s) 38, 502
BsaXI ACNNNNNCTCC 8 cut(s) 168, 198, 312, 342, 567, 597, 1092, 1122
Bsc4I CCNNNNNNNGG 4 cut(s) 301, 434, 622, 1445
Bse118I RCCGGY 3 cut(s) 344, 386, 871
Bse1I ACTGG 2 cut(s) 964, 1044
Bse21I CCTNAGG 2 cut(s) 1036, 1078
Bse3DI GCAATG 2 cut(s) 529, 960
BseBI CCWGG 7 cut(s) 296, 573, 823, 903, 1198, 1313, 1329
BseDI CCNNGG 7 cut(s) 73, 300, 571, 821, 942, 1196, 1197
BseGI GGATG 6 cut(s) 69, 636, 749, 817, 893, 1376
BseLI CCNNNNNNNGG 4 cut(s) 301, 434, 622, 1445
BseMI GCAATG 2 cut(s) 529, 960
BseMII CTCAG 5 cut(s) 67, 233, 372, 1050, 1455
BseNI ACTGG 2 cut(s) 964, 1044
BseRI GAGGAG 7 cut(s) 16, 19, 22, 25, 189, 192, 494
BseSI GKGCMC 1 cut(s) 327
BseXI GCAGC 6 cut(s) 137, 328, 435, 1060, 1385, 1409
BsgI GTGCAG 1 cut(s) 111
BshFI GGCC 6 cut(s) 5, 299, 386, 635, 988, 1311
BshNI GGYRCC 1 cut(s) 1040
BsiSI CCGG 9 cut(s) 39, 75, 318, 345, 387, 503, 593, 872, 984
BslI CCNNNNNNNGG 4 cut(s) 301, 434, 622, 1445
BsmAI GTCTC 3 cut(s) 56, 570, 1088
BsmBI CGTCTC 2 cut(s) 56, 570
BsnI GGCC 6 cut(s) 5, 299, 386, 635, 988, 1311
Bso31I GGTCTC 1 cut(s) 1088
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 2 cut(s) 248, 327
Bsp143I GATC 3 cut(s) 77, 505, 688
BspACI CCGC 2 cut(s) 6, 67
BspANI GGCC 6 cut(s) 5, 299, 386, 635, 988, 1311
BspCNI CTCAG 5 cut(s) 66, 234, 373, 1049, 1454
BspLI GGNNCC 5 cut(s) 79, 529, 597, 690, 1042
BspPI GGATC 5 cut(s) 72, 85, 513, 683, 696
BspT104I TTCGAA 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 1040
BspTI CTTAAG 1 cut(s) 140
BspTNI GGTCTC 1 cut(s) 1088
BsrDI GCAATG 2 cut(s) 529, 960
BsrFI RCCGGY 3 cut(s) 344, 386, 871
BsrI ACTGG 2 cut(s) 964, 1044
BssAI RCCGGY 3 cut(s) 344, 386, 871
BssECI CCNNGG 7 cut(s) 73, 300, 571, 821, 942, 1196, 1197
BssMI GATC 3 cut(s) 77, 505, 688
BssSI CACGAG 4 cut(s) 126, 249, 308, 415
BssT1I CCWWGG 1 cut(s) 942
Bst2BI CACGAG 4 cut(s) 126, 249, 308, 415
Bst2UI CCWGG 7 cut(s) 296, 573, 823, 903, 1198, 1313, 1329
Bst4CI ACNGT 3 cut(s) 158, 280, 732
Bst6I CTCTTC 1 cut(s) 1220
BstAFI CTTAAG 1 cut(s) 140
BstAPI GCANNNNNTGC 1 cut(s) 1070
BstBAI YACGTR 1 cut(s) 1353
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 4 cut(s) 315, 346, 436, 558
BstDEI CTNAG 8 cut(s) 53, 242, 381, 777, 801, 1036, 1078, 1441
BstDSI CCRYGG 1 cut(s) 300
BstF5I GGATG 6 cut(s) 69, 636, 749, 817, 893, 1376
BstH2I RGCGCY 1 cut(s) 1233
BstHHI GCGC 2 cut(s) 453, 1232
BstKTI GATC 3 cut(s) 80, 508, 691
BstMAI GTCTC 3 cut(s) 56, 570, 1088
BstMBI GATC 3 cut(s) 77, 505, 688
BstMWI GCNNNNNNNGC 5 cut(s) 130, 557, 632, 823, 1070
BstNI CCWGG 7 cut(s) 296, 573, 823, 903, 1198, 1313, 1329
BstNSI RCATGY 2 cut(s) 910, 1011
BstSCI CCNGG 9 cut(s) 73, 294, 571, 821, 901, 983, 1196, 1311, 1327
BstSFI CTRYAG 1 cut(s) 1391
BstSLI GKGCMC 1 cut(s) 327
BstV1I GCAGC 6 cut(s) 137, 328, 435, 1060, 1385, 1409
BstX2I RGATCY 2 cut(s) 77, 688
BstXI CCANNNNNNTGG 2 cut(s) 829, 909
BstYI RGATCY 2 cut(s) 77, 688
Bsu36I CCTNAGG 2 cut(s) 1036, 1078
BsuRI GGCC 6 cut(s) 5, 299, 386, 635, 988, 1311
BtgI CCRYGG 1 cut(s) 300
BtgZI GCGATG 1 cut(s) 131
BtsCI GGATG 6 cut(s) 69, 636, 749, 817, 893, 1376
BtsI GCAGTG 2 cut(s) 198, 204
BtsIMutI CAGTG 2 cut(s) 198, 204
Cac8I GCNNGC 4 cut(s) 315, 346, 436, 558
CaiI CAGNNNCTG 1 cut(s) 767
CfoI GCGC 2 cut(s) 453, 1232
Cfr10I RCCGGY 3 cut(s) 344, 386, 871
Cfr13I GGNCC 2 cut(s) 986, 1309
Csp6I GTAC 2 cut(s) 421, 1325
CviAII CATG 3 cut(s) 221, 907, 1008
CviQI GTAC 2 cut(s) 421, 1325
DdeI CTNAG 8 cut(s) 53, 242, 381, 777, 801, 1036, 1078, 1441
DpnI GATC 3 cut(s) 79, 507, 690
DpnII GATC 3 cut(s) 77, 505, 688
EaeI YGGCCR 2 cut(s) 3, 633
Eam1104I CTCTTC 1 cut(s) 1220
EarI CTCTTC 1 cut(s) 1220
Eco130I CCWWGG 1 cut(s) 942
Eco24I GRGCYC 1 cut(s) 248
Eco31I GGTCTC 1 cut(s) 1088
Eco47III AGCGCT 1 cut(s) 1231
Eco57I CTGAAG 1 cut(s) 1272
Eco81I CCTNAGG 2 cut(s) 1036, 1078
EcoRI GAATTC 1 cut(s) 1273
EcoRII CCWGG 7 cut(s) 294, 571, 821, 901, 1196, 1311, 1327
EcoT14I CCWWGG 1 cut(s) 942
EcoT38I GRGCYC 1 cut(s) 248
ErhI CCWWGG 1 cut(s) 942
Esp3I CGTCTC 2 cut(s) 56, 570
FaeI CATG 3 cut(s) 224, 910, 1011
FalI AAGNNNNNCTT 2 cut(s) 540, 572
FatI CATG 3 cut(s) 220, 906, 1007
FauI CCCGC 1 cut(s) 74
Fnu4HI GCNGC 7 cut(s) 6, 151, 342, 449, 1074, 1374, 1398
FokI GGATG 6 cut(s) 56, 643, 736, 804, 880, 1363
FriOI GRGCYC 1 cut(s) 248
Fsp4HI GCNGC 7 cut(s) 6, 151, 342, 449, 1074, 1374, 1398
FspBI CTAG 1 cut(s) 1322
GlaI GCGC 2 cut(s) 452, 1231
GluI GCNGC 7 cut(s) 6, 151, 342, 449, 1074, 1374, 1398
GsuI CTGGAG 1 cut(s) 1004
HaeII RGCGCY 1 cut(s) 1233
HaeIII GGCC 6 cut(s) 5, 299, 386, 635, 988, 1311
HapII CCGG 9 cut(s) 39, 75, 318, 345, 387, 503, 593, 872, 984
HhaI GCGC 2 cut(s) 453, 1232
Hin1II CATG 3 cut(s) 224, 910, 1011
Hin6I GCGC 2 cut(s) 451, 1230
HinP1I GCGC 2 cut(s) 451, 1230
HincII GTYRAC 2 cut(s) 232, 256
HindII GTYRAC 2 cut(s) 232, 256
HindIII AAGCTT 2 cut(s) 886, 1159
HpaII CCGG 9 cut(s) 39, 75, 318, 345, 387, 503, 593, 872, 984
HphI GGTGA 2 cut(s) 619, 1024
Hpy166II GTNNAC 5 cut(s) 232, 256, 423, 772, 1032
Hpy188I TCNGA 7 cut(s) 82, 243, 510, 841, 924, 1192, 1279
Hpy188III TCNNGA 8 cut(s) 171, 404, 415, 701, 726, 791, 1021, 1183
Hpy8I GTNNAC 5 cut(s) 232, 256, 423, 772, 1032
Hpy99I CGWCG 1 cut(s) 1143
HpyAV CCTTC 5 cut(s) 279, 378, 401, 1247, 1391
HpyCH4III ACNGT 3 cut(s) 158, 280, 732
HpyCH4IV ACGT 2 cut(s) 234, 1352
HpyF10VI GCNNNNNNNGC 5 cut(s) 130, 557, 632, 823, 1070
HpyF3I CTNAG 8 cut(s) 53, 242, 381, 777, 801, 1036, 1078, 1441
HpySE526I ACGT 2 cut(s) 234, 1352
Hsp92II CATG 3 cut(s) 224, 910, 1011
HspAI GCGC 2 cut(s) 451, 1230
KroI GCCGGC 1 cut(s) 344
KroNI GCCGGC 1 cut(s) 346
Kzo9I GATC 3 cut(s) 77, 505, 688
LmnI GCTCC 6 cut(s) 445, 527, 601, 1023, 1135, 1202
Lsp1109I GCAGC 6 cut(s) 137, 328, 435, 1060, 1385, 1409
LweI GCATC 8 cut(s) 78, 154, 628, 675, 826, 902, 1324, 1385
MaeI CTAG 1 cut(s) 1322
MaeII ACGT 2 cut(s) 234, 1352
MaeIII GTNAC 4 cut(s) 611, 1000, 1108, 1292
MalI GATC 3 cut(s) 79, 507, 690
MboI GATC 3 cut(s) 77, 505, 688
MboII GAAGA 2 cut(s) 647, 1207
MflI RGATCY 2 cut(s) 77, 688
MhlI GDGCHC 2 cut(s) 248, 327
MluCI AATT 6 cut(s) 459, 588, 861, 1266, 1273, 1410
MlyI GAGTC 4 cut(s) 261, 913, 1033, 1289
MmeI TCCRAC 2 cut(s) 683, 777
MroNI GCCGGC 1 cut(s) 344
MseI TTAA 5 cut(s) 141, 393, 1122, 1413, 1453
MspA1I CMGCKG 1 cut(s) 1400
MspCI CTTAAG 1 cut(s) 140
MspI CCGG 9 cut(s) 39, 75, 318, 345, 387, 503, 593, 872, 984
MspR9I CCNGG 9 cut(s) 75, 296, 573, 823, 903, 985, 1198, 1313, 1329
MvaI CCWGG 7 cut(s) 296, 573, 823, 903, 1198, 1313, 1329
MwoI GCNNNNNNNGC 5 cut(s) 130, 557, 632, 823, 1070
NaeI GCCGGC 1 cut(s) 346
NciI CCSGG 2 cut(s) 75, 985
NdeII GATC 3 cut(s) 77, 505, 688
NgoMIV GCCGGC 1 cut(s) 344
NlaIII CATG 3 cut(s) 224, 910, 1011
NlaIV GGNNCC 5 cut(s) 79, 529, 597, 690, 1042
NspI RCATGY 2 cut(s) 910, 1011
NspV TTCGAA 1 cut(s) 60
PasI CCCWGGG 1 cut(s) 1197
PdiI GCCGGC 1 cut(s) 346
PfeI GAWTC 7 cut(s) 400, 411, 489, 652, 704, 736, 1362
PkrI GCNGC 7 cut(s) 7, 152, 343, 450, 1075, 1375, 1399
PleI GAGTC 4 cut(s) 260, 913, 1032, 1288
PpsI GAGTC 4 cut(s) 260, 913, 1032, 1288
Ppu21I YACGTR 1 cut(s) 1353
PshBI ATTAAT 1 cut(s) 393
PsiI TTATAA 1 cut(s) 587
Psp6I CCWGG 7 cut(s) 294, 571, 821, 901, 1196, 1311, 1327
PspGI CCWGG 7 cut(s) 294, 571, 821, 901, 1196, 1311, 1327
PspN4I GGNNCC 5 cut(s) 79, 529, 597, 690, 1042
PspPI GGNCC 2 cut(s) 986, 1309
PstNI CAGNNNCTG 1 cut(s) 767
PsuI RGATCY 2 cut(s) 77, 688
PvuII CAGCTG 1 cut(s) 1400
RsaI GTAC 2 cut(s) 422, 1326
RsaNI GTAC 2 cut(s) 421, 1325
SaqAI TTAA 5 cut(s) 141, 393, 1122, 1413, 1453
SatI GCNGC 7 cut(s) 6, 151, 342, 449, 1074, 1374, 1398
Sau3AI GATC 3 cut(s) 77, 505, 688
Sau96I GGNCC 2 cut(s) 986, 1309
SchI GAGTC 4 cut(s) 261, 913, 1033, 1289
ScrFI CCNGG 9 cut(s) 75, 296, 573, 823, 903, 985, 1198, 1313, 1329
SduI GDGCHC 2 cut(s) 248, 327
SfaNI GCATC 8 cut(s) 78, 154, 628, 675, 826, 902, 1324, 1385
SfcI CTRYAG 1 cut(s) 1391
SfuI TTCGAA 1 cut(s) 60
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
SpeI ACTAGT 1 cut(s) 1321
Sse9I AATT 6 cut(s) 459, 588, 861, 1266, 1273, 1410
SsiI CCGC 2 cut(s) 6, 67
SspMI CTAG 1 cut(s) 1322
StyD4I CCNGG 9 cut(s) 73, 294, 571, 821, 901, 983, 1196, 1311, 1327
StyI CCWWGG 1 cut(s) 942
TaaI ACNGT 3 cut(s) 158, 280, 732
TaiI ACGT 2 cut(s) 237, 1355
TaqI TCGA 4 cut(s) 60, 334, 360, 702
TasI AATT 6 cut(s) 459, 588, 861, 1266, 1273, 1410
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 7 cut(s) 400, 411, 489, 652, 704, 736, 1362
Tru1I TTAA 5 cut(s) 141, 393, 1122, 1413, 1453
Tru9I TTAA 5 cut(s) 141, 393, 1122, 1413, 1453
TscAI CASTG 2 cut(s) 198, 204
TseI GCWGC 6 cut(s) 150, 341, 448, 1073, 1373, 1397
TspDTI ATGAA 3 cut(s) 858, 867, 1207
TspGWI ACGGA 5 cut(s) 94, 250, 361, 731, 1259
TspRI CASTG 2 cut(s) 198, 204
Vha464I CTTAAG 1 cut(s) 140
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 1 cut(s) 1273
XceI RCATGY 2 cut(s) 910, 1011
XspI CTAG 1 cut(s) 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.