Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0013158

Physical Location & Seq

Genomic Coordinates Reverse (-)

18257459 .. 18265433

Gene Structure 7975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0196000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGCTACTCTAAGATCAAGGCCGTGGAGTGATTACAACACAAGCCATGGCCACGAAGCTTGGTCTTCTTCATGTCCCTGCAAACCCGGAATTCCCAATTACAGTTTGAACTTGAAGAATCTGAGATTTGGGACAACCGGGTTGGCTCATCTGTGGCAGAAAATGGGAAAGAAATCAAGAGAAAAGTACTTGGTAGCTCAAGGGTACGGTTCAGAAAGTCGTGAAGCTTATGTTATTTCCGACCAAGACAAGAGATTTGTGAACGCTCTCCGGGAAGTTCAGCCGTATATTTTCCTCAACAGAGGCCGGACATTTGTCGTGGTGGTCTCCGGCGAGATTGTTGCTAGTCCTTACTTCGATGCCATACTTCAGGATATTGCTTTTCTTCATCACCTGGGGATCAAGTTTGTTCTTGTTCCAGGGACCCATGTCGAAATCGATACCCTTTTGGCTCAGAGAAGCAAGAGTCCAAAGTTTGCTGGTCAGTATAGAGTGACCGACTCAGATTCTCTAACAGCAGCAAAGGAAGCTGCTGGGAAGATTTCTATGGATATAGAGGCAAAGCTTTCGCCCGGACCCTCCATATGCAATATTCGTCGGCATGGTGACAGTAGTCGTTGGCATGAAGTTGGCGTCAGTGTAGCTAGTGGTAACTTTCTTGCAGCCAAGAGGAGAGGAGTCGTTGCTGGTGTTGATTATGGGGCAACAGGTGAAGTTAAGAAAGTGGATGTGGTTCGCATGCGGGAGAGGCTTGATGCGGGTTGTATTGTGCTATTGAGCAACCTTGGTTATTCGAGCTCTGGAGAAGTTTTAAATTGCAACACGTATGAAGTTGCAACAGCTTGTTCCTTGGCTATTGGAGCAGATAAGCTTATCTGCATAATGGATGGCCCAATTCTTGATGAGAGTGGACGTCTGATTCGTTTCTTGACTCTTGAAGAAGCAGACAAGTTGATTCGTCAGCGGGCTAAGCAAAGTGAAATAGCCGCCAGCTATGTGAAAGCTGTTGATGAAGAAAATCTCCATTATCTTGGACATGATAGTGGGAATTTTCTTAACAGAAAGCATATTCCAAGGTTTAACAATGGTGTTGGTTTTGAGAATGGCAATGGATTGTGGTATGGTGAACAAGGTTTTGCAATAGGGGGTCATGAGCGCCAAAGTCGATTAAGCGGTTACCTTTCAGAATTGGCTGCTGCAGCCTTTGTTTGCAGGGGAGGTGTTCAAAGAGTTCATCTGTTAGATGGCACTAAAGGGGGAGTATTGTTGTTGGAATTATTTAAAAGAGACGGAATGGGGACTATGGTGGCAAGTGACGTTTATGAAGGAACCCGGATGGCTAGGGTGTCGGACCTCTCTGGAATAAGACAAATCATACAACCTTTAGAAGCAGCTGGCACATTGGTTACGAGAACTGATGAAGAGCTACTTGAAGCATTGGATTCTTATGTTGTTGTCGAAAGAGAAGGTCAAATTATTGCATGTGCTGCTCTTTTTCCTTTCCAAGAGGAGAAATGTGCAGAGGTGGCTGCTATTGCAGTTTCTCCAGATTGCCGTGGACAAGGACAGGGAGATAAATTACTTGATTACATGGAGAAGAAGGCATCTTCTCATGGATTGGAAAAGCTTTTCTTGCTAACAACCCGAACTGCAGATTGGTTTAAGAGACGTGGATTTTCTGAATGTTCAATTGAATCAATACCAGAGAAGCGGAGGGAAAGGATTAATCTGTCCCGTAGATCCAAGTATTATATGAAGCAGCTGTTACCTGATACTAGCGGAATTACTGTTGATAGGGTGTTCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004069 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008483 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009095 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016740 GO:0016769 GO:0019438 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0033853 GO:0033854 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00350 ko00360 ko00400 ko00950 ko00960 ko01100 ko01110 ko01130 ko01230 map00350 map00360 map00400 map00950 map00960 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

602

Amino Acids

66.48

Weight (kDa)

8.45

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	104 - 325	2.7e-11	Amino acid kinase family
Acetyltransf_1	PF00583	479 - 559	7.8e-15	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	482 - 561	1.9e-13	Acetyltransferase (GNAT) domain
Acetyltransf_10	PF13673	482 - 563	6.3e-06	Acetyltransferase (GNAT) domain
IDM1_C	PF23209	483 - 569	1.2e-06	Increased DNA methylation 1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22250 AT2G22250 AT2G22250
fragaria_vesca	FvH4_1g21500
malus_domestica	MD01G1024400.v1.1 MD15G1329000.v1.1
prunus_persica	Prupe.6G179700_v2.0.a1
pyrus_communis	pycom01g05210 pycom01g05220 pycom15g29680 pycom15g29690 pycom15g29700
rosa_chinensis	RchiOBHm_Chr2g0115381
rosa_laevigata	RLG00000018181
rosa_multiflora	Rmu_sc0001897.1_g000009
rosa_roxburghii	Rroxscaffold_2G00130870
rosa_rugosa	Rorug02G0196000
rosa_wichuraiana	Rw2G019870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	916
AciI	CCGC	7 cut(s)	742, 758, 964, 987, 1173, 1711, 1779
AclWI	GGATC	2 cut(s)	407, 1734
AcoI	YGGCCR	1 cut(s)	49
AcsI	RAATTY	2 cut(s)	90, 1048
AcuI	CTGAAG	1 cut(s)	353
AcyI	GRCGYC	2 cut(s)	633, 913
AfaI	GTAC	2 cut(s)	188, 206
AflIII	ACRYGT	1 cut(s)	822
AgsI	TTSAA	7 cut(s)	109, 115, 938, 1226, 1433, 1689, 1694
AjiI	CACGTC	1 cut(s)	1670
AjnI	CCWGG	2 cut(s)	393, 418
AjuI	GAANNNNNNNTTGG	2 cut(s)	1639, 1671
Alw21I	GWGCWC	1 cut(s)	800
Alw26I	GTCTC	3 cut(s)	331, 1281, 1660
AlwI	GGATC	2 cut(s)	407, 1734
AoxI	GGCC	4 cut(s)	20, 49, 304, 889
ApoI	RAATTY	2 cut(s)	90, 1048
ArsI	GACNNNNNNTTYG	4 cut(s)	239, 271, 903, 935
AseI	ATTAAT	1 cut(s)	1725
AspLEI	GCGC	1 cut(s)	1158
AspS9I	GGNCC	4 cut(s)	423, 575, 890, 1351
AsuC2I	CCSGG	5 cut(s)	87, 139, 272, 573, 1333
AsuHPI	GGTGA	4 cut(s)	383, 617, 722, 1136
AvaII	GGWCC	3 cut(s)	423, 575, 1351
BalI	TGGCCA	1 cut(s)	51
BanII	GRGCYC	1 cut(s)	800
BbsI	GAAGAC	1 cut(s)	57
Bbv12I	GWGCWC	1 cut(s)	800
BccI	CCATC	3 cut(s)	881, 1238, 1330
BceAI	ACGGC	3 cut(s)	7, 268, 1539
BcgI	CGANNNNNNTGC	4 cut(s)	323, 357, 549, 583
BciT130I	CCWGG	2 cut(s)	395, 420
BcnI	CCSGG	5 cut(s)	87, 139, 272, 573, 1333
BcoDI	GTCTC	3 cut(s)	331, 1281, 1660
BfaI	CTAG	4 cut(s)	345, 645, 1341, 1776
BfmI	CTRYAG	2 cut(s)	1197, 1650
BfoI	RGCGCY	1 cut(s)	1159
BlpI	GCTNAGC	1 cut(s)	969
BmcAI	AGTACT	1 cut(s)	188
Bme1390I	CCNGG	7 cut(s)	87, 139, 272, 395, 420, 573, 1333
Bme18I	GGWCC	3 cut(s)	423, 575, 1351
BmgBI	CACGTC	1 cut(s)	1670
BmgT120I	GGNCC	4 cut(s)	423, 575, 890, 1351
BmiI	GGNNCC	4 cut(s)	424, 425, 577, 1330
BmrFI	CCNGG	7 cut(s)	87, 139, 272, 395, 420, 573, 1333
BmsI	GCATC	3 cut(s)	349, 745, 1613
BoxI	GACNNNNGTC	3 cut(s)	314, 428, 612
BpiI	GAAGAC	1 cut(s)	57
BpmI	CTGGAG	2 cut(s)	822, 1530
Bpu1102I	GCTNAGC	1 cut(s)	969
BpuEI	CTTGAG	1 cut(s)	183
BpuMI	CCSGG	5 cut(s)	87, 139, 272, 573, 1333
Bsa29I	ATCGAT	1 cut(s)	438
BsaAI	YACGTR	1 cut(s)	825
BsaHI	GRCGYC	2 cut(s)	633, 913
BsaI	GGTCTC	1 cut(s)	331
BsaJI	CCNNGG	8 cut(s)	23, 46, 394, 419, 784, 849, 1073, 1555
Bse3DI	GCAATG	1 cut(s)	1114
BseBI	CCWGG	2 cut(s)	395, 420
BseCI	ATCGAT	1 cut(s)	438
BseDI	CCNNGG	8 cut(s)	23, 46, 394, 419, 784, 849, 1073, 1555
BseGI	GGATG	3 cut(s)	733, 892, 1341
BseMI	GCAATG	1 cut(s)	1114
BseMII	CTCAG	3 cut(s)	113, 467, 516
BseRI	GAGGAG	3 cut(s)	685, 690, 1523
BseYI	CCCAGC	1 cut(s)	533
BsgI	GTGCAG	1 cut(s)	1539
BshFI	GGCC	4 cut(s)	22, 51, 306, 891
BshVI	ATCGAT	1 cut(s)	438
BsiHKAI	GWGCWC	1 cut(s)	800
BsiSI	CCGG	7 cut(s)	87, 138, 271, 307, 330, 573, 1333
BslFI	GGGAC	5 cut(s)	60, 145, 436, 1312, 1717
BsmAI	GTCTC	3 cut(s)	331, 1281, 1660
BsmBI	CGTCTC	2 cut(s)	1281, 1660
BsmFI	GGGAC	5 cut(s)	60, 145, 436, 1312, 1717
BsnI	GGCC	4 cut(s)	22, 51, 306, 891
Bso31I	GGTCTC	1 cut(s)	331
Bsp1286I	GDGCHC	1 cut(s)	800
Bsp143I	GATC	3 cut(s)	14, 399, 1739
Bsp1720I	GCTNAGC	1 cut(s)	969
Bsp19I	CCATGG	1 cut(s)	46
BspACI	CCGC	7 cut(s)	742, 758, 964, 987, 1173, 1711, 1779
BspANI	GGCC	4 cut(s)	22, 51, 306, 891
BspCNI	CTCAG	3 cut(s)	114, 466, 515
BspDI	ATCGAT	1 cut(s)	438
BspHI	TCATGA	1 cut(s)	1150
BspLI	GGNNCC	4 cut(s)	424, 425, 577, 1330
BspMAI	CTGCAG	2 cut(s)	1201, 1654
BspPI	GGATC	2 cut(s)	407, 1734
BspQI	GCTCTTC	1 cut(s)	1416
BspTNI	GGTCTC	1 cut(s)	331
BsrDI	GCAATG	1 cut(s)	1114
BssECI	CCNNGG	8 cut(s)	23, 46, 394, 419, 784, 849, 1073, 1555
BssMI	GATC	3 cut(s)	14, 399, 1739
BssNI	GRCGYC	2 cut(s)	633, 913
BssT1I	CCWWGG	4 cut(s)	46, 784, 849, 1073
Bst2UI	CCWGG	2 cut(s)	395, 420
Bst4CI	ACNGT	4 cut(s)	104, 209, 611, 1789
Bst6I	CTCTTC	1 cut(s)	1416
BstACI	GRCGYC	2 cut(s)	633, 913
BstAPI	GCANNNNNTGC	1 cut(s)	1487
BstBAI	YACGTR	1 cut(s)	825
BstC8I	GCNNGC	4 cut(s)	740, 966, 991, 1396
BstDEI	CTNAG	5 cut(s)	11, 122, 453, 502, 969
BstDSI	CCRYGG	3 cut(s)	23, 46, 1555
BstEII	GGTNACC	1 cut(s)	1175
BstF5I	GGATG	3 cut(s)	733, 892, 1341
BstH2I	RGCGCY	1 cut(s)	1159
BstHHI	GCGC	1 cut(s)	1158
BstKTI	GATC	3 cut(s)	17, 402, 1742
BstMAI	GTCTC	3 cut(s)	331, 1281, 1660
BstMBI	GATC	3 cut(s)	14, 399, 1739
BstMWI	GCNNNNNNNGC	9 cut(s)	527, 748, 860, 970, 1199, 1487, 1526, 1535, 1633
BstNI	CCWGG	2 cut(s)	395, 420
BstNSI	RCATGY	2 cut(s)	742, 1485
BstPAI	GACNNNNGTC	3 cut(s)	314, 428, 612
BstPI	GGTNACC	1 cut(s)	1175
BstSCI	CCNGG	7 cut(s)	85, 137, 270, 393, 418, 571, 1331
BstSFI	CTRYAG	2 cut(s)	1197, 1650
BstV2I	GAAGAC	1 cut(s)	57
BstX2I	RGATCY	1 cut(s)	1739
BstXI	CCANNNNNNTGG	1 cut(s)	1031
BstYI	RGATCY	1 cut(s)	1739
Bsu15I	ATCGAT	1 cut(s)	438
BsuRI	GGCC	4 cut(s)	22, 51, 306, 891
BsuTUI	ATCGAT	1 cut(s)	438
BtgI	CCRYGG	3 cut(s)	23, 46, 1555
BtrI	CACGTC	1 cut(s)	1670
BtsCI	GGATG	3 cut(s)	733, 892, 1341
BtsIMutI	CAGTG	1 cut(s)	643
Cac8I	GCNNGC	4 cut(s)	740, 966, 991, 1396
CciI	TCATGA	1 cut(s)	1150
CfoI	GCGC	1 cut(s)	1158
Cfr13I	GGNCC	4 cut(s)	423, 575, 890, 1351
ClaI	ATCGAT	1 cut(s)	438
CseI	GACGC	1 cut(s)	622
Csp6I	GTAC	2 cut(s)	187, 205
CspCI	CAANNNNNGTGG	2 cut(s)	41, 76
CviQI	GTAC	2 cut(s)	187, 205
DdeI	CTNAG	5 cut(s)	11, 122, 453, 502, 969
DpnI	GATC	3 cut(s)	16, 401, 1741
DpnII	GATC	3 cut(s)	14, 399, 1739
DraI	TTTAAA	2 cut(s)	813, 1282
EaeI	YGGCCR	1 cut(s)	49
Eam1104I	CTCTTC	1 cut(s)	1416
EarI	CTCTTC	1 cut(s)	1416
Ecl136II	GAGCTC	1 cut(s)	798
Eco130I	CCWWGG	4 cut(s)	46, 784, 849, 1073
Eco24I	GRGCYC	1 cut(s)	800
Eco31I	GGTCTC	1 cut(s)	331
Eco47I	GGWCC	3 cut(s)	423, 575, 1351
Eco53kI	GAGCTC	1 cut(s)	798
Eco57I	CTGAAG	1 cut(s)	353
Eco91I	GGTNACC	1 cut(s)	1175
EcoICRI	GAGCTC	1 cut(s)	798
EcoO109I	RGGNCCY	1 cut(s)	423
EcoO65I	GGTNACC	1 cut(s)	1175
EcoRI	GAATTC	1 cut(s)	90
EcoRII	CCWGG	2 cut(s)	393, 418
EcoT14I	CCWWGG	4 cut(s)	46, 784, 849, 1073
EcoT38I	GRGCYC	1 cut(s)	800
ErhI	CCWWGG	4 cut(s)	46, 784, 849, 1073
Esp3I	CGTCTC	2 cut(s)	1281, 1660
FalI	AAGNNNNNCTT	4 cut(s)	1413, 1445, 1616, 1648
FaqI	GGGAC	5 cut(s)	60, 145, 436, 1312, 1717
FauI	CCCGC	3 cut(s)	735, 751, 957
FauNDI	CATATG	1 cut(s)	584
FokI	GGATG	3 cut(s)	740, 899, 1348
FriOI	GRGCYC	1 cut(s)	800
FspBI	CTAG	4 cut(s)	345, 645, 1341, 1776
GlaI	GCGC	1 cut(s)	1157
GsaI	CCCAGC	1 cut(s)	537
GsuI	CTGGAG	2 cut(s)	822, 1530
HaeII	RGCGCY	1 cut(s)	1159
HaeIII	GGCC	4 cut(s)	22, 51, 306, 891
HapII	CCGG	7 cut(s)	87, 138, 271, 307, 330, 573, 1333
HgaI	GACGC	1 cut(s)	622
HhaI	GCGC	1 cut(s)	1158
Hin1I	GRCGYC	2 cut(s)	633, 913
Hin6I	GCGC	1 cut(s)	1156
HinP1I	GCGC	1 cut(s)	1156
HindIII	AAGCTT	5 cut(s)	57, 225, 563, 869, 1625
HpaII	CCGG	7 cut(s)	87, 138, 271, 307, 330, 573, 1333
HphI	GGTGA	4 cut(s)	383, 617, 722, 1136
Hpy166II	GTNNAC	4 cut(s)	262, 911, 1127, 1559
Hpy188I	TCNGA	9 cut(s)	123, 214, 241, 456, 505, 918, 1186, 1351, 1681
Hpy8I	GTNNAC	4 cut(s)	262, 911, 1127, 1559
Hpy99I	CGWCG	1 cut(s)	600
HpyAV	CCTTC	3 cut(s)	1319, 1460, 1594
HpyCH4III	ACNGT	4 cut(s)	104, 209, 611, 1789
HpyCH4IV	ACGT	4 cut(s)	824, 913, 1317, 1669
HpyF10VI	GCNNNNNNNGC	9 cut(s)	527, 748, 860, 970, 1199, 1487, 1526, 1535, 1633
HpyF3I	CTNAG	5 cut(s)	11, 122, 453, 502, 969
HpySE526I	ACGT	4 cut(s)	824, 913, 1317, 1669
Hsp92I	GRCGYC	2 cut(s)	633, 913
HspAI	GCGC	1 cut(s)	1156
KflI	GGGWCCC	1 cut(s)	423
Kzo9I	GATC	3 cut(s)	14, 399, 1739
LguI	GCTCTTC	1 cut(s)	1416
LmnI	GCTCC	1 cut(s)	860
LweI	GCATC	3 cut(s)	349, 745, 1613
MaeI	CTAG	4 cut(s)	345, 645, 1341, 1776
MaeII	ACGT	4 cut(s)	824, 913, 1317, 1669
MaeIII	GTNAC	7 cut(s)	493, 605, 650, 1175, 1313, 1405, 1764
MalI	GATC	3 cut(s)	16, 401, 1741
MboI	GATC	3 cut(s)	14, 399, 1739
MfeI	CAATTG	1 cut(s)	1689
MflI	RGATCY	1 cut(s)	1739
MhlI	GDGCHC	1 cut(s)	800
MlsI	TGGCCA	1 cut(s)	51
MluNI	TGGCCA	1 cut(s)	51
MlyI	GAGTC	4 cut(s)	475, 494, 687, 925
MmeI	TCCRAC	3 cut(s)	264, 1251, 1329
Mox20I	TGGCCA	1 cut(s)	51
MscI	TGGCCA	1 cut(s)	51
MseI	TTAA	8 cut(s)	717, 812, 1056, 1080, 1169, 1281, 1662, 1725
MslI	CAYNNNNRTG	1 cut(s)	1041
Msp20I	TGGCCA	1 cut(s)	51
MspA1I	CMGCKG	3 cut(s)	964, 1394, 1762
MspI	CCGG	7 cut(s)	87, 138, 271, 307, 330, 573, 1333
MspR9I	CCNGG	7 cut(s)	87, 139, 272, 395, 420, 573, 1333
MunI	CAATTG	1 cut(s)	1689
MvaI	CCWGG	2 cut(s)	395, 420
MwoI	GCNNNNNNNGC	9 cut(s)	527, 748, 860, 970, 1199, 1487, 1526, 1535, 1633
NciI	CCSGG	5 cut(s)	87, 139, 272, 573, 1333
NcoI	CCATGG	1 cut(s)	46
NdeI	CATATG	1 cut(s)	584
NdeII	GATC	3 cut(s)	14, 399, 1739
NlaIV	GGNNCC	4 cut(s)	424, 425, 577, 1330
NmuCI	GTSAC	3 cut(s)	493, 605, 1313
NspI	RCATGY	2 cut(s)	742, 1485
PaeI	GCATGC	1 cut(s)	742
PagI	TCATGA	1 cut(s)	1150
PciSI	GCTCTTC	1 cut(s)	1416
PcsI	WCGNNNNNNNCGW	1 cut(s)	919
PfeI	GAWTC	6 cut(s)	118, 506, 919, 955, 1442, 1694
PfoI	TCCNGGA	1 cut(s)	270
PleI	GAGTC	4 cut(s)	474, 494, 686, 925
PpsI	GAGTC	4 cut(s)	474, 494, 686, 925
Ppu21I	YACGTR	1 cut(s)	825
PpuMI	RGGWCCY	1 cut(s)	423
PshAI	GACNNNNGTC	3 cut(s)	314, 428, 612
PshBI	ATTAAT	1 cut(s)	1725
Psp124BI	GAGCTC	1 cut(s)	800
Psp5II	RGGWCCY	1 cut(s)	423
Psp6I	CCWGG	2 cut(s)	393, 418
PspEI	GGTNACC	1 cut(s)	1175
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	2 cut(s)	393, 418
PspN4I	GGNNCC	4 cut(s)	424, 425, 577, 1330
PspPI	GGNCC	4 cut(s)	423, 575, 890, 1351
PspPPI	RGGWCCY	1 cut(s)	423
PstI	CTGCAG	2 cut(s)	1201, 1654
PsuI	RGATCY	1 cut(s)	1739
PvuII	CAGCTG	2 cut(s)	1394, 1762
RsaI	GTAC	2 cut(s)	188, 206
RsaNI	GTAC	2 cut(s)	187, 205
RseI	CAYNNNNRTG	1 cut(s)	1041
SacI	GAGCTC	1 cut(s)	800
SapI	GCTCTTC	1 cut(s)	1416
SaqAI	TTAA	8 cut(s)	717, 812, 1056, 1080, 1169, 1281, 1662, 1725
Sau3AI	GATC	3 cut(s)	14, 399, 1739
Sau96I	GGNCC	4 cut(s)	423, 575, 890, 1351
ScaI	AGTACT	1 cut(s)	188
SchI	GAGTC	4 cut(s)	475, 494, 687, 925
ScrFI	CCNGG	7 cut(s)	87, 139, 272, 395, 420, 573, 1333
SduI	GDGCHC	1 cut(s)	800
SfaNI	GCATC	3 cut(s)	349, 745, 1613
SfcI	CTRYAG	2 cut(s)	1197, 1650
SinI	GGWCC	3 cut(s)	423, 575, 1351
SmiMI	CAYNNNNRTG	1 cut(s)	1041
SmlI	CTYRAG	1 cut(s)	198
SmoI	CTYRAG	1 cut(s)	198
SphI	GCATGC	1 cut(s)	742
SsiI	CCGC	7 cut(s)	742, 758, 964, 987, 1173, 1711, 1779
SspI	AATATT	1 cut(s)	592
SspMI	CTAG	4 cut(s)	345, 645, 1341, 1776
SstI	GAGCTC	1 cut(s)	800
StyD4I	CCNGG	7 cut(s)	85, 137, 270, 393, 418, 571, 1331
StyI	CCWWGG	4 cut(s)	46, 784, 849, 1073
TaaI	ACNGT	4 cut(s)	104, 209, 611, 1789
TaiI	ACGT	4 cut(s)	827, 916, 1320, 1672
TaqI	TCGA	6 cut(s)	357, 432, 438, 794, 1165, 1458
TaqII	GACCGA	1 cut(s)	512
TatI	WGTACW	1 cut(s)	186
TauI	GCSGC	1 cut(s)	989
TfiI	GAWTC	6 cut(s)	118, 506, 919, 955, 1442, 1694
Tru1I	TTAA	8 cut(s)	717, 812, 1056, 1080, 1169, 1281, 1662, 1725
Tru9I	TTAA	8 cut(s)	717, 812, 1056, 1080, 1169, 1281, 1662, 1725
TscAI	CASTG	1 cut(s)	643
TseFI	GTSAC	3 cut(s)	493, 605, 1313
Tsp45I	GTSAC	3 cut(s)	493, 605, 1313
TspDTI	ATGAA	9 cut(s)	60, 377, 639, 843, 1026, 1223, 1338, 1434, 1769
TspGWI	ACGGA	1 cut(s)	1305
TspRI	CASTG	1 cut(s)	643
VpaK11BI	GGWCC	3 cut(s)	423, 575, 1351
VspI	ATTAAT	1 cut(s)	1725
XapI	RAATTY	2 cut(s)	90, 1048
XceI	RCATGY	2 cut(s)	742, 1485
XspI	CTAG	4 cut(s)	345, 645, 1341, 1776
ZraI	GACGTC	1 cut(s)	914
ZrmI	AGTACT	1 cut(s)	188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.