Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0013158

Physical Location & Seq

Genomic Coordinates Reverse (-)

67354829 .. 67359413

Gene Structure 4585 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00130870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGGCCACTTCCTCCTCCTCCTCCACCATCGCACGCCTCAGCTTCTCCACAACCCGATTATCCGGACCCGAACCCGGCCCGGACCCGAAATCCCTATCTTTCCATTCTCGCTCCCGCACGTGTCTTCCTCTCAAGTACAGGTCGGAAGGATCATCAAGATCAAGATCTGTTGTGAGGGCAGTGGCGGTTACTGGGAGTGACCAAGCAATGGAGGTCGATATTTCTCTCAGCCCGAGAGTCAACTCCATCAAGCCGTCGAAGACCGTCGCGATCACCGACCAGGCCACCGCTCTCGTCCAGGCCGGCTTCCCCGTGATCCGATTAGCCGCCGGCGAGCCCGATTTCGATACTCCTTCTGTCGTAGCTGAGGCGGGGATCAATGCGATTCGGGAGGGGTATACCAGGTACACACCAAATGCCGGGACTTTGGAGCTGCGCCAGGCGATTTGTCATAAGCTGCAAGAGGAGAATGGGATATCTTACTCACCGGATCAGGTTTTGGTTAGTAATGGAGCCAAGCAGTGTATTGATCAAGCAGTGCAGGCAGTTTGTGCACCGGGAGATGAGGTTATAATTCCAGCTCCATTTTGGGTGAGTTACCCGGAAATTGCAAGGAAGGCTGATGCAACTCCTGTGATTCTTCAAACGAGCATATCTGAGAATTTTCTATTGGATCCCAAGGTTCTTGAGTCCAAGCTCACTGAAAGGTCAAGAGTGCTGATTCTTTGTTCTCCATCCAACCCAACGGGATCAGTTTACCCCAAGAAATTGCTTGAGGATATTGCTCAAATTGTAGCAAGGCATCCCAGGCTTCTGGTCCTGTCTGATGAAATTTATGAACACATAATATACGCACCAGCAACTCACACGAGCTTTGCATCTTTGCCAGGCATGTGGGAGAGGACTTTGACAGTCAATGGGTTTTCTAAGGCCTTTGCAATGACTGGTTGGCGGCTTGGATATATTGCTGGTCCTAAACACTTTATCGCAGCATGTAATAAGATCCAGAGTCAGTCCACCTCAGGTGCTAGTAGCATATCACAGAAAGCAGGAGTTGCAGCCTTGGGTCTTGGCTATGCTGGTGGAGAGACAGTTTCTATCATGGTGAAAGCATTCAGAGAGCGACGGGATTTCTTGGTGAAAAGCTTGGGTGAACTTGCTGGTGTTAAGATTTCAGAACCCAAGGGAGCTTTCTATCTCTTCCTTGATTTCAGCTGTTACTATGGAACAGAGGCTGATGGGTTTGGTAAAATAGAGGATTCTGAGTCCTTATGCAAATACCTGCTCGACAAGGGTCAGGTTGCACTAGTGCCGGGGGATGCATTTGGAGATGACACCTGTGTACGAATCTCCTATGCAGCATCCCTCTCAACCCTACAGGCAGCTGTGGAAAGAATTAAGAAGGCACTCATTGTGCTGAAGCCTGCTGCCCGTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004069 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008483 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009095 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016740 GO:0016769 GO:0019438 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0033853 GO:0033854 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00350 ko00360 ko00400 ko00950 ko00960 ko01100 ko01110 ko01130 ko01230 map00350 map00360 map00400 map00950 map00960 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

479

Amino Acids

51.41

Weight (kDa)

8.45

Isoelectric Point (pI)

41.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_1_2	PF00155	105 - 466	1.2e-74	Aminotransferase class I and II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22250 AT2G22250 AT2G22250
fragaria_vesca	FvH4_1g21500
malus_domestica	MD01G1024400.v1.1 MD15G1329000.v1.1
prunus_persica	Prupe.6G179700_v2.0.a1
pyrus_communis	pycom01g05210 pycom01g05220 pycom15g29680 pycom15g29690 pycom15g29700
rosa_chinensis	RchiOBHm_Chr2g0115381
rosa_laevigata	RLG00000018181
rosa_multiflora	Rmu_sc0001897.1_g000009
rosa_roxburghii	Rroxscaffold_2G00130870
rosa_rugosa	Rorug02G0196000
rosa_wichuraiana	Rw2G019870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	572
Acc36I	ACCTGC	1 cut(s)	1290
AccB7I	CCANNNNNTGG	1 cut(s)	208
AccBSI	CCGCTC	1 cut(s)	290
AccI	GTMKAC	1 cut(s)	398
AccII	CGCG	1 cut(s)	269
AccIII	TCCGGA	1 cut(s)	62
AciI	CCGC	6 cut(s)	115, 185, 288, 327, 371, 952
AclWI	GGATC	8 cut(s)	157, 310, 383, 498, 668, 681, 757, 997
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	661, 831
AcuI	CTGAAG	1 cut(s)	1439
AcvI	CACGTG	1 cut(s)	120
AfaI	GTAC	3 cut(s)	137, 407, 1344
AfiI	CCNNNNNNNGG	3 cut(s)	74, 208, 419
AflIII	ACRYGT	1 cut(s)	119
AgsI	TTSAA	1 cut(s)	644
AhlI	ACTAGT	1 cut(s)	1306
AjnI	CCWGG	6 cut(s)	279, 297, 401, 438, 806, 886
AjuI	GAANNNNNNNTTGG	4 cut(s)	653, 685, 1175, 1207
Alw21I	GWGCWC	1 cut(s)	556
Alw26I	GTCTC	1 cut(s)	1082
Alw44I	GTGCAC	1 cut(s)	552
AlwI	GGATC	8 cut(s)	157, 310, 383, 498, 668, 681, 757, 997
AlwNI	CAGNNNCTG	1 cut(s)	1235
Ama87I	CYCGRG	1 cut(s)	232
Aor13HI	TCCGGA	1 cut(s)	62
AoxI	GGCC	5 cut(s)	3, 76, 282, 300, 930
ApaLI	GTGCAC	1 cut(s)	552
ApeKI	GCWGC	7 cut(s)	433, 457, 989, 1058, 1358, 1382, 1427
ApoI	RAATTY	2 cut(s)	661, 831
Asp700I	GAANNNNTTC	1 cut(s)	1112
AspLEI	GCGC	1 cut(s)	438
AspS9I	GGNCC	5 cut(s)	65, 77, 82, 817, 971
AsuC2I	CCSGG	6 cut(s)	75, 80, 421, 558, 602, 1314
AsuHPI	GGTGA	6 cut(s)	265, 477, 604, 1117, 1150, 1163
AvaI	CYCGRG	1 cut(s)	232
AvaII	GGWCC	4 cut(s)	65, 82, 817, 971
AxyI	CCTNAGG	1 cut(s)	1021
BaeGI	GKGCMC	1 cut(s)	556
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	673
BanII	GRGCYC	1 cut(s)	339
BauI	CACGAG	1 cut(s)	868
BbrPI	CACGTG	1 cut(s)	120
BbsI	GAAGAC	2 cut(s)	116, 266
Bbv12I	GWGCWC	1 cut(s)	556
BbvCI	CCTCAGC	2 cut(s)	38, 366
BbvI	GCAGC	7 cut(s)	420, 444, 1001, 1070, 1370, 1394, 1414
BccI	CCATC	4 cut(s)	35, 254, 742, 1232
BceAI	ACGGC	1 cut(s)	238
BciT130I	CCWGG	6 cut(s)	281, 299, 403, 440, 808, 888
BclI	TGATCA	1 cut(s)	529
BcnI	CCSGG	6 cut(s)	75, 80, 421, 558, 602, 1314
BcoDI	GTCTC	1 cut(s)	1082
BcuI	ACTAGT	1 cut(s)	1306
BfaI	CTAG	2 cut(s)	1029, 1307
BfmI	CTRYAG	1 cut(s)	1376
BfuAI	ACCTGC	1 cut(s)	1290
BglII	AGATCT	1 cut(s)	164
BisI	GCNGC	9 cut(s)	327, 434, 458, 953, 990, 1059, 1359, 1383, 1428
BlsI	GCNGC	9 cut(s)	328, 435, 459, 954, 991, 1060, 1360, 1384, 1429
Bme18I	GGWCC	4 cut(s)	65, 82, 817, 971
BmeT110I	CYCGRG	1 cut(s)	232
BmgT120I	GGNCC	5 cut(s)	65, 77, 82, 817, 971
BmiI	GGNNCC	4 cut(s)	67, 84, 514, 675
BmrI	ACTGGG	1 cut(s)	201
BmsI	GCATC	5 cut(s)	613, 811, 887, 1309, 1370
BmuI	ACTGGG	1 cut(s)	201
BoxI	GACNNNNGTC	1 cut(s)	1293
BpiI	GAAGAC	2 cut(s)	116, 266
Bpu10I	CCTNAGC	2 cut(s)	38, 366
BpuEI	CTTGAG	3 cut(s)	116, 707, 794
BpuMI	CCSGG	6 cut(s)	75, 80, 421, 558, 602, 1314
BsaAI	YACGTR	1 cut(s)	120
BsaBI	GATNNNNATC	1 cut(s)	163
BsaJI	CCNNGG	5 cut(s)	678, 806, 1062, 1182, 1313
BsaWI	WCCGGW	2 cut(s)	62, 487
BsaXI	ACNNNNNCTCC	4 cut(s)	552, 582, 1077, 1107
Bsc4I	CCNNNNNNNGG	3 cut(s)	74, 208, 419
Bse118I	RCCGGY	2 cut(s)	302, 329
Bse1I	ACTGG	2 cut(s)	196, 949
Bse21I	CCTNAGG	1 cut(s)	1021
Bse3DI	GCAATG	2 cut(s)	213, 945
Bse8I	GATNNNNATC	1 cut(s)	163
BseAI	TCCGGA	1 cut(s)	62
BseBI	CCWGG	6 cut(s)	281, 299, 403, 440, 808, 888
BseDI	CCNNGG	5 cut(s)	678, 806, 1062, 1182, 1313
BseGI	GGATG	4 cut(s)	734, 802, 1324, 1361
BseJI	GATNNNNATC	1 cut(s)	163
BseLI	CCNNNNNNNGG	3 cut(s)	74, 208, 419
BseMI	GCAATG	2 cut(s)	213, 945
BseMII	CTCAG	6 cut(s)	52, 241, 357, 648, 1035, 1254
BseNI	ACTGG	2 cut(s)	196, 949
BseRI	GAGGAG	4 cut(s)	4, 7, 10, 479
BseSI	GKGCMC	1 cut(s)	556
BseXI	GCAGC	7 cut(s)	420, 444, 1001, 1070, 1370, 1394, 1414
BsgI	GTGCAG	1 cut(s)	560
Bsh1236I	CGCG	1 cut(s)	269
BshFI	GGCC	5 cut(s)	5, 78, 284, 302, 932
BsiHKAI	GWGCWC	1 cut(s)	556
BsiHKCI	CYCGRG	1 cut(s)	232
BslFI	GGGAC	1 cut(s)	436
BslI	CCNNNNNNNGG	3 cut(s)	74, 208, 419
BsmAI	GTCTC	1 cut(s)	1082
BsmFI	GGGAC	1 cut(s)	436
BsmI	GAATGC	1 cut(s)	1112
BsnI	GGCC	5 cut(s)	5, 78, 284, 302, 932
BsoBI	CYCGRG	1 cut(s)	232
Bsp1286I	GDGCHC	2 cut(s)	339, 556
Bsp13I	TCCGGA	1 cut(s)	62
Bsp68I	TCGCGA	1 cut(s)	269
BspACI	CCGC	6 cut(s)	115, 185, 288, 327, 371, 952
BspANI	GGCC	5 cut(s)	5, 78, 284, 302, 932
BspCNI	CTCAG	6 cut(s)	51, 240, 358, 649, 1034, 1255
BspEI	TCCGGA	1 cut(s)	62
BspFNI	CGCG	1 cut(s)	269
BspLI	GGNNCC	4 cut(s)	67, 84, 514, 675
BspMI	ACCTGC	1 cut(s)	1290
BspPI	GGATC	8 cut(s)	157, 310, 383, 498, 668, 681, 757, 997
BsrBI	CCGCTC	1 cut(s)	290
BsrDI	GCAATG	2 cut(s)	213, 945
BsrFI	RCCGGY	2 cut(s)	302, 329
BsrI	ACTGG	2 cut(s)	196, 949
BssAI	RCCGGY	2 cut(s)	302, 329
BssECI	CCNNGG	5 cut(s)	678, 806, 1062, 1182, 1313
BssNAI	GTATAC	1 cut(s)	399
BssSI	CACGAG	1 cut(s)	868
BssT1I	CCWWGG	3 cut(s)	678, 1062, 1182
Bst1107I	GTATAC	1 cut(s)	399
Bst2BI	CACGAG	1 cut(s)	868
Bst2UI	CCWGG	6 cut(s)	281, 299, 403, 440, 808, 888
Bst4CI	ACNGT	3 cut(s)	265, 913, 1093
Bst6I	CTCTTC	1 cut(s)	1205
BstAPI	GCANNNNNTGC	2 cut(s)	551, 1055
BstBAI	YACGTR	1 cut(s)	120
BstC8I	GCNNGC	6 cut(s)	34, 304, 331, 335, 543, 1425
BstDEI	CTNAG	7 cut(s)	38, 227, 366, 657, 927, 1021, 1263
BstF5I	GGATG	4 cut(s)	734, 802, 1324, 1361
BstFNI	CGCG	1 cut(s)	269
BstHHI	GCGC	1 cut(s)	438
BstMAI	GTCTC	1 cut(s)	1082
BstMWI	GCNNNNNNNGC	5 cut(s)	542, 551, 617, 808, 1055
BstNI	CCWGG	6 cut(s)	281, 299, 403, 440, 808, 888
BstNSI	RCATGY	2 cut(s)	895, 996
BstPAI	GACNNNNGTC	1 cut(s)	1293
BstSFI	CTRYAG	1 cut(s)	1376
BstSLI	GKGCMC	1 cut(s)	556
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	7 cut(s)	420, 444, 1001, 1070, 1370, 1394, 1414
BstV2I	GAAGAC	2 cut(s)	116, 266
BstX2I	RGATCY	3 cut(s)	164, 673, 1002
BstXI	CCANNNNNNTGG	2 cut(s)	814, 894
BstYI	RGATCY	3 cut(s)	164, 673, 1002
BstZ17I	GTATAC	1 cut(s)	399
Bsu36I	CCTNAGG	1 cut(s)	1021
BsuRI	GGCC	5 cut(s)	5, 78, 284, 302, 932
BtgZI	GCGATG	1 cut(s)	13
BtsCI	GGATG	4 cut(s)	734, 802, 1324, 1361
BtsI	GCAGTG	3 cut(s)	186, 527, 543
BtsIMutI	CAGTG	4 cut(s)	186, 527, 543, 699
BtuMI	TCGCGA	1 cut(s)	269
BveI	ACCTGC	1 cut(s)	1290
Cac8I	GCNNGC	6 cut(s)	34, 304, 331, 335, 543, 1425
CaiI	CAGNNNCTG	1 cut(s)	1235
CfoI	GCGC	1 cut(s)	438
Cfr10I	RCCGGY	2 cut(s)	302, 329
Cfr13I	GGNCC	5 cut(s)	65, 77, 82, 817, 971
CsiI	ACCWGGT	1 cut(s)	401
Csp6I	GTAC	3 cut(s)	136, 406, 1343
CviAII	CATG	3 cut(s)	892, 993, 1102
CviQI	GTAC	3 cut(s)	136, 406, 1343
DdeI	CTNAG	7 cut(s)	38, 227, 366, 657, 927, 1021, 1263
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1205
EarI	CTCTTC	1 cut(s)	1205
Eco130I	CCWWGG	3 cut(s)	678, 1062, 1182
Eco147I	AGGCCT	1 cut(s)	932
Eco24I	GRGCYC	1 cut(s)	339
Eco32I	GATATC	1 cut(s)	477
Eco47I	GGWCC	4 cut(s)	65, 82, 817, 971
Eco57I	CTGAAG	1 cut(s)	1439
Eco72I	CACGTG	1 cut(s)	120
Eco81I	CCTNAGG	1 cut(s)	1021
Eco88I	CYCGRG	1 cut(s)	232
EcoRII	CCWGG	6 cut(s)	279, 297, 401, 438, 806, 886
EcoRV	GATATC	1 cut(s)	477
EcoT14I	CCWWGG	3 cut(s)	678, 1062, 1182
EcoT22I	ATGCAT	1 cut(s)	1324
EcoT38I	GRGCYC	1 cut(s)	339
ErhI	CCWWGG	3 cut(s)	678, 1062, 1182
FaeI	CATG	3 cut(s)	895, 996, 1105
FaqI	GGGAC	1 cut(s)	436
FatI	CATG	3 cut(s)	891, 992, 1101
FauI	CCCGC	2 cut(s)	122, 364
FbaI	TGATCA	1 cut(s)	529
FblI	GTMKAC	1 cut(s)	398
Fnu4HI	GCNGC	9 cut(s)	327, 434, 458, 953, 990, 1059, 1359, 1383, 1428
FokI	GGATG	4 cut(s)	721, 789, 1331, 1348
FriOI	GRGCYC	1 cut(s)	339
Fsp4HI	GCNGC	9 cut(s)	327, 434, 458, 953, 990, 1059, 1359, 1383, 1428
FspBI	CTAG	2 cut(s)	1029, 1307
GlaI	GCGC	1 cut(s)	437
GluI	GCNGC	9 cut(s)	327, 434, 458, 953, 990, 1059, 1359, 1383, 1428
HaeIII	GGCC	5 cut(s)	5, 78, 284, 302, 932
HhaI	GCGC	1 cut(s)	438
Hin1II	CATG	3 cut(s)	895, 996, 1105
Hin6I	GCGC	1 cut(s)	436
HinP1I	GCGC	1 cut(s)	436
HincII	GTYRAC	1 cut(s)	241
HindII	GTYRAC	1 cut(s)	241
HindIII	AAGCTT	1 cut(s)	1144
HinfI	GANTC	9 cut(s)	237, 385, 637, 689, 721, 1009, 1259, 1265, 1347
HphI	GGTGA	6 cut(s)	265, 477, 604, 1117, 1150, 1163
Hpy166II	GTNNAC	8 cut(s)	241, 399, 408, 554, 757, 1017, 1154, 1343
Hpy188I	TCNGA	7 cut(s)	145, 320, 658, 826, 1118, 1177, 1264
Hpy188III	TCNNGA	8 cut(s)	63, 156, 162, 268, 389, 686, 711, 1006
Hpy8I	GTNNAC	8 cut(s)	241, 399, 408, 554, 757, 1017, 1154, 1343
Hpy99I	CGWCG	3 cut(s)	259, 269, 1128
HpyAV	CCTTC	4 cut(s)	140, 363, 610, 1396
HpyCH4III	ACNGT	3 cut(s)	265, 913, 1093
HpyCH4IV	ACGT	1 cut(s)	119
HpyF10VI	GCNNNNNNNGC	5 cut(s)	542, 551, 617, 808, 1055
HpyF3I	CTNAG	7 cut(s)	38, 227, 366, 657, 927, 1021, 1263
HpySE526I	ACGT	1 cut(s)	119
Hsp92II	CATG	3 cut(s)	895, 996, 1105
HspAI	GCGC	1 cut(s)	436
Kpn2I	TCCGGA	1 cut(s)	62
KroI	GCCGGC	2 cut(s)	302, 329
KroNI	GCCGGC	2 cut(s)	304, 331
Ksp22I	TGATCA	1 cut(s)	529
LmnI	GCTCC	5 cut(s)	116, 430, 512, 586, 1187
Lsp1109I	GCAGC	7 cut(s)	420, 444, 1001, 1070, 1370, 1394, 1414
LweI	GCATC	5 cut(s)	613, 811, 887, 1309, 1370
MabI	ACCWGGT	1 cut(s)	401
MaeI	CTAG	2 cut(s)	1029, 1307
MaeII	ACGT	1 cut(s)	119
MaeIII	GTNAC	4 cut(s)	187, 197, 596, 1217
MbiI	CCGCTC	1 cut(s)	290
MboII	GAAGA	4 cut(s)	116, 271, 632, 1192
MflI	RGATCY	3 cut(s)	164, 673, 1002
MhlI	GDGCHC	2 cut(s)	339, 556
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	7 cut(s)	573, 606, 661, 767, 789, 831, 1395
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	246, 698, 1018, 1274
MmeI	TCCRAC	2 cut(s)	123, 762
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1324
MreI	CGCCGGCG	1 cut(s)	329
MroI	TCCGGA	1 cut(s)	62
MroNI	GCCGGC	2 cut(s)	302, 329
MroXI	GAANNNNTTC	1 cut(s)	1112
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	1167, 1398
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	1215, 1385
Mva1269I	GAATGC	1 cut(s)	1112
MvaI	CCWGG	6 cut(s)	281, 299, 403, 440, 808, 888
MvnI	CGCG	1 cut(s)	269
MwoI	GCNNNNNNNGC	5 cut(s)	542, 551, 617, 808, 1055
NaeI	GCCGGC	2 cut(s)	304, 331
NciI	CCSGG	6 cut(s)	75, 80, 421, 558, 602, 1314
NgoMIV	GCCGGC	2 cut(s)	302, 329
NlaIII	CATG	3 cut(s)	895, 996, 1105
NlaIV	GGNNCC	4 cut(s)	67, 84, 514, 675
NmuCI	GTSAC	1 cut(s)	197
NruI	TCGCGA	1 cut(s)	269
NsiI	ATGCAT	1 cut(s)	1324
NspI	RCATGY	2 cut(s)	895, 996
PceI	AGGCCT	1 cut(s)	932
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	1 cut(s)	1112
PdiI	GCCGGC	2 cut(s)	304, 331
PdmI	GAANNNNTTC	1 cut(s)	1112
PfeI	GAWTC	5 cut(s)	385, 637, 721, 1259, 1347
PflMI	CCANNNNNTGG	1 cut(s)	208
PkrI	GCNGC	9 cut(s)	328, 435, 459, 954, 991, 1060, 1360, 1384, 1429
PleI	GAGTC	4 cut(s)	245, 697, 1017, 1273
PmaCI	CACGTG	1 cut(s)	120
PmlI	CACGTG	1 cut(s)	120
PpsI	GAGTC	4 cut(s)	245, 697, 1017, 1273
Ppu21I	YACGTR	1 cut(s)	120
PshAI	GACNNNNGTC	1 cut(s)	1293
PsiI	TTATAA	1 cut(s)	572
Psp6I	CCWGG	6 cut(s)	279, 297, 401, 438, 806, 886
PspCI	CACGTG	1 cut(s)	120
PspGI	CCWGG	6 cut(s)	279, 297, 401, 438, 806, 886
PspN4I	GGNNCC	4 cut(s)	67, 84, 514, 675
PspPI	GGNCC	5 cut(s)	65, 77, 82, 817, 971
PstNI	CAGNNNCTG	1 cut(s)	1235
PsuI	RGATCY	3 cut(s)	164, 673, 1002
PvuII	CAGCTG	2 cut(s)	1215, 1385
RruI	TCGCGA	1 cut(s)	269
RsaI	GTAC	3 cut(s)	137, 407, 1344
RsaNI	GTAC	3 cut(s)	136, 406, 1343
SaqAI	TTAA	2 cut(s)	1167, 1398
SatI	GCNGC	9 cut(s)	327, 434, 458, 953, 990, 1059, 1359, 1383, 1428
Sau96I	GGNCC	5 cut(s)	65, 77, 82, 817, 971
SchI	GAGTC	4 cut(s)	246, 698, 1018, 1274
SduI	GDGCHC	2 cut(s)	339, 556
SexAI	ACCWGGT	1 cut(s)	401
SfaNI	GCATC	5 cut(s)	613, 811, 887, 1309, 1370
SfcI	CTRYAG	1 cut(s)	1376
SgrAI	CRCCGGYG	1 cut(s)	329
SinI	GGWCC	4 cut(s)	65, 82, 817, 971
SmlI	CTYRAG	3 cut(s)	131, 686, 773
SmoI	CTYRAG	3 cut(s)	131, 686, 773
SpeI	ACTAGT	1 cut(s)	1306
Sse9I	AATT	7 cut(s)	573, 606, 661, 767, 789, 831, 1395
SseBI	AGGCCT	1 cut(s)	932
SsiI	CCGC	6 cut(s)	115, 185, 288, 327, 371, 952
SspMI	CTAG	2 cut(s)	1029, 1307
StuI	AGGCCT	1 cut(s)	932
StyI	CCWWGG	3 cut(s)	678, 1062, 1182
TaaI	ACNGT	3 cut(s)	265, 913, 1093
TaiI	ACGT	1 cut(s)	122
TaqI	TCGA	4 cut(s)	216, 257, 345, 1287
TasI	AATT	7 cut(s)	573, 606, 661, 767, 789, 831, 1395
TatI	WGTACW	1 cut(s)	135
TauI	GCSGC	2 cut(s)	329, 955
TfiI	GAWTC	5 cut(s)	385, 637, 721, 1259, 1347
Tru1I	TTAA	2 cut(s)	1167, 1398
Tru9I	TTAA	2 cut(s)	1167, 1398
TscAI	CASTG	4 cut(s)	186, 527, 543, 706
TseFI	GTSAC	1 cut(s)	197
TseI	GCWGC	7 cut(s)	433, 457, 989, 1058, 1358, 1382, 1427
Tsp45I	GTSAC	1 cut(s)	197
TspDTI	ATGAA	2 cut(s)	843, 852
TspRI	CASTG	4 cut(s)	186, 527, 543, 706
Van91I	CCANNNNNTGG	1 cut(s)	208
VneI	GTGCAC	1 cut(s)	552
VpaK11BI	GGWCC	4 cut(s)	65, 82, 817, 971
XapI	RAATTY	2 cut(s)	661, 831
XceI	RCATGY	2 cut(s)	895, 996
XcmI	CCANNNNNNNNNTGG	1 cut(s)	585
XmiI	GTMKAC	1 cut(s)	398
XmnI	GAANNNNTTC	1 cut(s)	1112
XspI	CTAG	2 cut(s)	1029, 1307
Zsp2I	ATGCAT	1 cut(s)	1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.