Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0004087

Physical Location & Seq

Genomic Coordinates Reverse (-)

17782462 .. 17789953

Gene Structure 7492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1072600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGTGGAGCACGATTGCGAACCTGAAGGAGAATCTTAACAAGATGGCGCAGGACGTCCACGACGACGACGACGATGACGAAGAGTACGAGATCCACGCCATCAATGGAGAAAAAGCTTATTCCTTATCTGATCGGAGGAATTCCCACAGCTTCGCCCATTCCAAATCCCCCTCCCGCTCTCCGATCCCCAATGGCGTCGATTTTACTATTACTCCCGAGATTGAACAATGCAAATTGGAAATTAAGAGGCTTCAGGAATCTGAGGCAGAAATAAAAGCATTATCAAAAAACTATGCAGCTCTGTTAAAGGAAAAAGAGGATCAAATATCCAGATTGAGTAAAGAAAATGGCTCATTGAAACAGAATCTGGACTCAACTACTGCATCTCTGAATGCAGCTAAAAATGAAAATCACAAAGCAGCTGCAAATGGAGTCAACGTGCTCAAGGGAAGTGGTAATCAGTCGCCCAACAGACAGCATAAAGTGACAAGTCCAGCAAAAATTGGATACTCTGGACATCAGAAACAGAATGGTGTTGTCTTTACACAAGACAGTACAAGCAATGGGATTTCACAGCTTTCAGATATGCAAGGGAGTGAAAGGGAGCTTGCAGATTTACTAGAAGAGAATAATAGGTCCCCGACAGCAGTGCTAGCTACTGCTGAGATGAAAAAATTACGGATGGAACTTAAAAAAGAACGCAATCAGTCAGAAAAGATACATCAAAAGTTACAAGAACAACAGAAATTGAATGAAGCAATCCAGGAAGAGCTCAAATTTCTGAAGTTGGATAGGGAAAAGACCTCCGTCGAGATAAGCAAAATAAGCAGTGAGTTGAATGAGAAAATGTCTGAGATAAATCGACTGCAAATGGAGTTGAATAGAAGGGAGGATGAAAATGCAAATAATGGTGCAGAGAGTTTGAAAAGGTTAATTGCAACCCTGCAGAAGGAAAATAATAGTCTTAAGATGGAGAAAAATGAACTTGAGGGCGCTTTGAAAGTGAGCAGAACTGCAAGTGAAATGCAGAAGGTGGAATCTTCAGAAAGTTTTCCTGGAAAGGAAGAAATGGAGAAATCGTTACGAGAGTTTGATAAAAATTTGAAGGAAACACGTCTTGAAAGGGACAAAACCTTGCAACAATTGTCACGCCTTAAACAGCATTTGTTGGAAAAGGAATCTGAAGATTCTGAAAAAATGGATGAAGACAGCAAAATTATTGAAGAACTTCGAGAAAGTAACGAATATCGAAGAGCTCAAATTTTACATTTGGAGAAAGCTTTGAATCAGGCAATTGCAAATCAGGACCAATTCAAGATGAGCAACAACAATGAAATTCAGAAATCAAAGGAAGTTATTGCTGATCTGAATAAAAGACTTGAAAGCTGCATGAGCACAATAGATGCCAAAAATGTTGAACTCTTGAATCTTCAAACTGCTCTTGGTCAGTACTATGCTGAAATTGAAGCTAAGGAACATTTGGAAGGAGATTTGTCTCGGGCAAGGGAAGAGTCAGCTAAGCTTTCGCGGCTCTTGAAAGAAGCGGACCATCAGGCAGAAGCATCAAAGAAAGAAAAGGAAGAAATTTTGTCCAAGCTTTCACAAGCTGAAAAAATAGTAGTAGATTGGAAAAGCAGAGTAAATAAACTTGAGGAAGACAATGCAAAATTACGCCGAGCTGTTGAGCAGAGCATGACCAGGCTTAATAGGATGTCGGTAGATTCAGATTATCTTGTTGACAGACGCATTGTGATCAAGTTACTGGTGACCTACTTCCAGAGAAACCACAGTAAAGAGGTTCTGGATCTTATGGCTCGCATGCTGGGATTCCCTGATGAAGACAAGCAGAGAATAGGCGTCTCTCAAGGTGCAGGCAAAGGTGTTGTTCGTGGAGTTTTCTCTCTACCTGGTCGCCTTGTTGGTGGAATTTTGGGAGGCGGTTCAGCTGGATTATCTGCAAATGCAGCAGCTGATAACCAGTCCTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAAGAAACTGAAGAAAGGGAGAGACGGGAGTTGGCCGACGATTCAGGCAGATCTCAAGAAGATTCATATAGAACTCCAACCAAATCGCATACCGGTCCATCGAATCCTGACCACAGAACAACTAGTGGGGGTGAGCCTGGTTTCTCAAGAACTAATTTATCACCAATCCAAGACACAAGCCCCTCACCTTTTCGCAGTAATTTTCGGTTGGAGCACTCTGATTCGGAATTCTCAACAGTTCCTCTCACTTCGTCAGAAAGCAATCCGTACGCCTCAAGAATGCTTCCGAGATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

770

Amino Acids

87.05

Weight (kDa)

5.76

Isoelectric Point (pI)

54.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46180 AT3G61570 AT3G61570
fragaria_vesca	FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532
malus_domestica	MD01G1072600.v1.1 MD07G1130300.v1.1
prunus_persica	Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1
pyrus_communis	pycom01g10180 pycom07g12720
rosa_chinensis	RchiOBHm_Chr1g0357861
rosa_laevigata	RLG00000027990
rosa_multiflora	Rmu_sc0007456.1_g000001 Rmu_sc0007456.1_g000005
rosa_roxburghii	Rroxscaffold_4G00298400 Rroxscaffold_4G00298440 Rroxscaffold_7G00215440
rosa_rugosa	Rorug01G0259100 Rorug01G0259200
rosa_samantha	Rh1AG273100 Rh1BG240400 Rh1CG256900 Rh1DG268700 Rh3AG149000 Rh3BG172200 Rh4AG248000 Rh5AG428400
rosa_wichuraiana	Rw1G024390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	57
AccBSI	CCGCTC	1 cut(s)	177
AccII	CGCG	1 cut(s)	1528
AciI	CCGC	4 cut(s)	175, 1528, 1544, 1938
AclWI	GGATC	4 cut(s)	85, 178, 327, 1812
AcoI	YGGCCR	1 cut(s)	2046
AcsI	RAATTY	8 cut(s)	139, 776, 1099, 1260, 1335, 1584, 1926, 2240
AcuI	CTGAAG	6 cut(s)	44, 236, 803, 1026, 1203, 2043
AcyI	GRCGYC	3 cut(s)	54, 195, 1857
AfaI	GTAC	4 cut(s)	86, 556, 1451, 2282
AfiI	CCNNNNNNNGG	1 cut(s)	949
AflII	CTTAAG	1 cut(s)	965
AflIII	ACRYGT	1 cut(s)	1112
AgeI	ACCGGT	1 cut(s)	2105
AhlI	ACTAGT	1 cut(s)	2135
AjiI	CACGTC	1 cut(s)	1115
AjnI	CCWGG	5 cut(s)	762, 1054, 1697, 1906, 2149
Alw21I	GWGCWC	6 cut(s)	11, 444, 774, 1258, 1397, 2229
Alw26I	GTCTC	3 cut(s)	1500, 1864, 2029
AlwI	GGATC	4 cut(s)	85, 178, 327, 1812
AlwNI	CAGNNNCTG	2 cut(s)	367, 1970
Ama87I	CYCGRG	2 cut(s)	215, 1497
AoxI	GGCC	1 cut(s)	2046
ApeKI	GCWGC	7 cut(s)	296, 395, 419, 422, 1386, 1964, 1967
ApoI	RAATTY	8 cut(s)	139, 776, 1099, 1260, 1335, 1584, 1926, 2240
AsiGI	ACCGGT	1 cut(s)	2105
Asp700I	GAANNNNTTC	2 cut(s)	1050, 1227
AspLEI	GCGC	2 cut(s)	49, 995
AspS9I	GGNCC	4 cut(s)	636, 1306, 1546, 2108
AsuHPI	GGTGA	4 cut(s)	1777, 2156, 2166, 2190
AsuNHI	GCTAGC	1 cut(s)	652
AvaI	CYCGRG	2 cut(s)	215, 1497
AvaII	GGWCC	4 cut(s)	636, 1306, 1546, 2108
BanII	GRGCYC	2 cut(s)	774, 1258
BbsI	GAAGAC	3 cut(s)	1212, 1662, 1845
Bbv12I	GWGCWC	6 cut(s)	11, 444, 774, 1258, 1397, 2229
BbvI	GCAGC	7 cut(s)	308, 407, 409, 431, 1373, 1976, 1979
BccI	CCATC	6 cut(s)	37, 107, 676, 964, 1557, 2119
BcgI	CGANNNNNNTGC	2 cut(s)	631, 665
BciT130I	CCWGG	5 cut(s)	764, 1056, 1699, 1908, 2151
BciVI	GTATCC	1 cut(s)	500
BclI	TGATCA	1 cut(s)	1752
BcoDI	GTCTC	3 cut(s)	1500, 1864, 2029
BcuI	ACTAGT	1 cut(s)	2135
BfaI	CTAG	3 cut(s)	620, 653, 2136
BfmI	CTRYAG	1 cut(s)	944
BfoI	RGCGCY	1 cut(s)	996
BfrI	CTTAAG	1 cut(s)	965
BfuI	GTATCC	1 cut(s)	500
BglII	AGATCT	2 cut(s)	1990, 2063
BisI	GCNGC	8 cut(s)	297, 396, 420, 423, 1387, 1529, 1965, 1968
BlpI	GCTNAGC	1 cut(s)	1518
BlsI	GCNGC	8 cut(s)	298, 397, 421, 424, 1388, 1530, 1966, 1969
BmcAI	AGTACT	1 cut(s)	1451
Bme1390I	CCNGG	5 cut(s)	764, 1056, 1699, 1908, 2151
Bme18I	GGWCC	4 cut(s)	636, 1306, 1546, 2108
BmeT110I	CYCGRG	2 cut(s)	215, 1497
BmgBI	CACGTC	1 cut(s)	1115
BmgT120I	GGNCC	4 cut(s)	636, 1306, 1546, 2108
BmiI	GGNNCC	1 cut(s)	638
BmrFI	CCNGG	5 cut(s)	764, 1056, 1699, 1908, 2151
BmsI	GCATC	3 cut(s)	392, 1393, 1571
BmtI	GCTAGC	1 cut(s)	656
BoxI	GACNNNNGTC	1 cut(s)	806
BpiI	GAAGAC	3 cut(s)	1212, 1662, 1845
Bpu10I	CCTNAGC	1 cut(s)	1470
Bpu1102I	GCTNAGC	1 cut(s)	1518
BpuEI	CTTGAG	7 cut(s)	428, 1007, 1670, 1848, 2052, 2143, 2272
BsaHI	GRCGYC	3 cut(s)	54, 195, 1857
BsaWI	WCCGGW	1 cut(s)	2105
BsaXI	ACNNNNNCTCC	6 cut(s)	196, 226, 423, 453, 1064, 1094
Bsc4I	CCNNNNNNNGG	1 cut(s)	949
Bse118I	RCCGGY	1 cut(s)	2105
Bse1I	ACTGG	2 cut(s)	1767, 1978
Bse3DI	GCAATG	1 cut(s)	568
BseBI	CCWGG	5 cut(s)	764, 1056, 1699, 1908, 2151
BseGI	GGATG	4 cut(s)	687, 898, 1207, 1716
BseLI	CCNNNNNNNGG	1 cut(s)	949
BseMI	GCAATG	1 cut(s)	568
BseMII	CTCAG	3 cut(s)	252, 654, 843
BseNI	ACTGG	2 cut(s)	1767, 1978
BseXI	GCAGC	7 cut(s)	308, 407, 409, 431, 1373, 1976, 1979
BseYI	CCCAGC	1 cut(s)	1822
BsgI	GTGCAG	2 cut(s)	933, 1890
Bsh1236I	CGCG	1 cut(s)	1528
BshFI	GGCC	1 cut(s)	2048
BshTI	ACCGGT	1 cut(s)	2105
BsiHKAI	GWGCWC	6 cut(s)	11, 444, 774, 1258, 1397, 2229
BsiHKCI	CYCGRG	2 cut(s)	215, 1497
BsiSI	CCGG	1 cut(s)	2106
BsiWI	CGTACG	1 cut(s)	2280
BslFI	GGGAC	2 cut(s)	622, 1139
BslI	CCNNNNNNNGG	1 cut(s)	949
BsmAI	GTCTC	3 cut(s)	1500, 1864, 2029
BsmBI	CGTCTC	2 cut(s)	1864, 2029
BsmFI	GGGAC	2 cut(s)	622, 1139
BsmI	GAATGC	2 cut(s)	397, 2298
BsnI	GGCC	1 cut(s)	2048
BsoBI	CYCGRG	2 cut(s)	215, 1497
Bsp1286I	GDGCHC	6 cut(s)	11, 444, 774, 1258, 1397, 2229
Bsp143I	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
Bsp1720I	GCTNAGC	1 cut(s)	1518
BspACI	CCGC	4 cut(s)	175, 1528, 1544, 1938
BspANI	GGCC	1 cut(s)	2048
BspCNI	CTCAG	3 cut(s)	253, 655, 844
BspFNI	CGCG	1 cut(s)	1528
BspLI	GGNNCC	1 cut(s)	638
BspMAI	CTGCAG	1 cut(s)	948
BspOI	GCTAGC	1 cut(s)	656
BspPI	GGATC	4 cut(s)	85, 178, 327, 1812
BspQI	GCTCTTC	2 cut(s)	762, 1246
BspTI	CTTAAG	1 cut(s)	965
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	1 cut(s)	568
BsrFI	RCCGGY	1 cut(s)	2105
BsrI	ACTGG	2 cut(s)	1767, 1978
BssAI	RCCGGY	1 cut(s)	2105
BssMI	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
BssNI	GRCGYC	3 cut(s)	54, 195, 1857
Bst2UI	CCWGG	5 cut(s)	764, 1056, 1699, 1908, 2151
Bst4CI	ACNGT	3 cut(s)	554, 1790, 2251
Bst6I	CTCTTC	5 cut(s)	75, 618, 762, 1246, 1503
BstACI	GRCGYC	3 cut(s)	54, 195, 1857
BstAFI	CTTAAG	1 cut(s)	965
BstC8I	GCNNGC	5 cut(s)	609, 654, 1816, 1820, 1873
BstDEI	CTNAG	5 cut(s)	261, 663, 852, 1470, 1518
BstEII	GGTNACC	1 cut(s)	1765
BstENI	CCTNNNNNAGG	1 cut(s)	947
BstF5I	GGATG	4 cut(s)	687, 898, 1207, 1716
BstFNI	CGCG	1 cut(s)	1528
BstH2I	RGCGCY	1 cut(s)	996
BstHHI	GCGC	2 cut(s)	49, 995
BstKTI	GATC	9 cut(s)	93, 133, 186, 322, 1366, 1755, 1807, 1993, 2066
BstMAI	GTCTC	3 cut(s)	1500, 1864, 2029
BstMBI	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
BstMWI	GCNNNNNNNGC	5 cut(s)	653, 825, 1392, 1528, 1964
BstNI	CCWGG	5 cut(s)	764, 1056, 1699, 1908, 2151
BstNSI	RCATGY	1 cut(s)	1822
BstPAI	GACNNNNGTC	1 cut(s)	806
BstPI	GGTNACC	1 cut(s)	1765
BstSCI	CCNGG	5 cut(s)	762, 1054, 1697, 1906, 2149
BstSFI	CTRYAG	1 cut(s)	944
BstUI	CGCG	1 cut(s)	1528
BstV1I	GCAGC	7 cut(s)	308, 407, 409, 431, 1373, 1976, 1979
BstV2I	GAAGAC	3 cut(s)	1212, 1662, 1845
BstX2I	RGATCY	4 cut(s)	90, 1804, 1990, 2063
BstYI	RGATCY	4 cut(s)	90, 1804, 1990, 2063
BsuI	GTATCC	1 cut(s)	500
BsuRI	GGCC	1 cut(s)	2048
BtrI	CACGTC	1 cut(s)	1115
BtsCI	GGATG	4 cut(s)	687, 898, 1207, 1716
BtsI	GCAGTG	2 cut(s)	654, 835
BtsIMutI	CAGTG	2 cut(s)	654, 835
Cac8I	GCNNGC	5 cut(s)	609, 654, 1816, 1820, 1873
CaiI	CAGNNNCTG	2 cut(s)	367, 1970
CfoI	GCGC	2 cut(s)	49, 995
Cfr10I	RCCGGY	1 cut(s)	2105
Cfr13I	GGNCC	4 cut(s)	636, 1306, 1546, 2108
CseI	GACGC	3 cut(s)	184, 1752, 1846
CsiI	ACCWGGT	1 cut(s)	1906
Csp6I	GTAC	4 cut(s)	85, 555, 1450, 2281
CspAI	ACCGGT	1 cut(s)	2105
CspCI	CAANNNNNGTGG	2 cut(s)	433, 468
CviAII	CATG	3 cut(s)	1390, 1693, 1819
CviQI	GTAC	4 cut(s)	85, 555, 1450, 2281
DdeI	CTNAG	5 cut(s)	261, 663, 852, 1470, 1518
DpnI	GATC	9 cut(s)	92, 132, 185, 321, 1365, 1754, 1806, 1992, 2065
DpnII	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
EaeI	YGGCCR	1 cut(s)	2046
Eam1104I	CTCTTC	5 cut(s)	75, 618, 762, 1246, 1503
EarI	CTCTTC	5 cut(s)	75, 618, 762, 1246, 1503
Ecl136II	GAGCTC	2 cut(s)	772, 1256
Eco24I	GRGCYC	2 cut(s)	774, 1258
Eco47I	GGWCC	4 cut(s)	636, 1306, 1546, 2108
Eco53kI	GAGCTC	2 cut(s)	772, 1256
Eco57I	CTGAAG	6 cut(s)	44, 236, 803, 1026, 1203, 2043
Eco88I	CYCGRG	2 cut(s)	215, 1497
Eco91I	GGTNACC	1 cut(s)	1765
EcoICRI	GAGCTC	2 cut(s)	772, 1256
EcoNI	CCTNNNNNAGG	1 cut(s)	947
EcoO109I	RGGNCCY	1 cut(s)	636
EcoO65I	GGTNACC	1 cut(s)	1765
EcoRI	GAATTC	2 cut(s)	139, 2240
EcoRII	CCWGG	5 cut(s)	762, 1054, 1697, 1906, 2149
EcoT38I	GRGCYC	2 cut(s)	774, 1258
Esp3I	CGTCTC	2 cut(s)	1864, 2029
FaeI	CATG	3 cut(s)	1393, 1696, 1822
FaqI	GGGAC	2 cut(s)	622, 1139
FatI	CATG	3 cut(s)	1389, 1692, 1818
FauI	CCCGC	1 cut(s)	182
FbaI	TGATCA	1 cut(s)	1752
Fnu4HI	GCNGC	8 cut(s)	297, 396, 420, 423, 1387, 1529, 1965, 1968
FokI	GGATG	4 cut(s)	694, 905, 1214, 1723
FriOI	GRGCYC	2 cut(s)	774, 1258
Fsp4HI	GCNGC	8 cut(s)	297, 396, 420, 423, 1387, 1529, 1965, 1968
FspBI	CTAG	3 cut(s)	620, 653, 2136
GlaI	GCGC	2 cut(s)	48, 994
GluI	GCNGC	8 cut(s)	297, 396, 420, 423, 1387, 1529, 1965, 1968
GsaI	CCCAGC	1 cut(s)	1826
HaeII	RGCGCY	1 cut(s)	996
HaeIII	GGCC	1 cut(s)	2048
HapII	CCGG	1 cut(s)	2106
HgaI	GACGC	3 cut(s)	184, 1752, 1846
HhaI	GCGC	2 cut(s)	49, 995
Hin1I	GRCGYC	3 cut(s)	54, 195, 1857
Hin1II	CATG	3 cut(s)	1393, 1696, 1822
Hin6I	GCGC	2 cut(s)	47, 993
HinP1I	GCGC	2 cut(s)	47, 993
HincII	GTYRAC	2 cut(s)	436, 1738
HindII	GTYRAC	2 cut(s)	436, 1738
HindIII	AAGCTT	4 cut(s)	114, 1278, 1520, 1595
HpaII	CCGG	1 cut(s)	2106
HphI	GGTGA	4 cut(s)	1777, 2156, 2166, 2190
Hpy166II	GTNNAC	3 cut(s)	58, 436, 1738
Hpy8I	GTNNAC	3 cut(s)	58, 436, 1738
Hpy99I	CGWCG	7 cut(s)	65, 68, 71, 74, 200, 812, 2054
HpyAV	CCTTC	6 cut(s)	19, 879, 943, 1024, 1099, 1478
HpyCH4III	ACNGT	3 cut(s)	554, 1790, 2251
HpyCH4IV	ACGT	3 cut(s)	54, 438, 1114
HpyF10VI	GCNNNNNNNGC	5 cut(s)	653, 825, 1392, 1528, 1964
HpyF3I	CTNAG	5 cut(s)	261, 663, 852, 1470, 1518
HpySE526I	ACGT	3 cut(s)	54, 438, 1114
Hsp92I	GRCGYC	3 cut(s)	54, 195, 1857
Hsp92II	CATG	3 cut(s)	1393, 1696, 1822
HspAI	GCGC	2 cut(s)	47, 993
Ksp22I	TGATCA	1 cut(s)	1752
Kzo9I	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
LguI	GCTCTTC	2 cut(s)	762, 1246
LmnI	GCTCC	3 cut(s)	6, 604, 2224
Lsp1109I	GCAGC	7 cut(s)	308, 407, 409, 431, 1373, 1976, 1979
LweI	GCATC	3 cut(s)	392, 1393, 1571
MabI	ACCWGGT	1 cut(s)	1906
MaeI	CTAG	3 cut(s)	620, 653, 2136
MaeII	ACGT	3 cut(s)	54, 438, 1114
MaeIII	GTNAC	7 cut(s)	484, 729, 1080, 1146, 1238, 1758, 1765
MalI	GATC	9 cut(s)	92, 132, 185, 321, 1365, 1754, 1806, 1992, 2065
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
MfeI	CAATTG	2 cut(s)	1142, 1293
MflI	RGATCY	4 cut(s)	90, 1804, 1990, 2063
MhlI	GDGCHC	6 cut(s)	11, 444, 774, 1258, 1397, 2229
MlyI	GAGTC	3 cut(s)	365, 441, 1520
MmeI	TCCRAC	4 cut(s)	768, 1149, 2114, 2202
MroXI	GAANNNNTTC	2 cut(s)	1050, 1227
MseI	TTAA	8 cut(s)	36, 243, 305, 690, 932, 966, 1155, 1704
MspA1I	CMGCKG	3 cut(s)	422, 1946, 1970
MspCI	CTTAAG	1 cut(s)	965
MspI	CCGG	1 cut(s)	2106
MspR9I	CCNGG	5 cut(s)	764, 1056, 1699, 1908, 2151
MunI	CAATTG	2 cut(s)	1142, 1293
Mva1269I	GAATGC	2 cut(s)	397, 2298
MvaI	CCWGG	5 cut(s)	764, 1056, 1699, 1908, 2151
MvnI	CGCG	1 cut(s)	1528
MwoI	GCNNNNNNNGC	5 cut(s)	653, 825, 1392, 1528, 1964
NdeII	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
NheI	GCTAGC	1 cut(s)	652
NlaIII	CATG	3 cut(s)	1393, 1696, 1822
NlaIV	GGNNCC	1 cut(s)	638
NmeAIII	GCCGAG	1 cut(s)	1700
NmuCI	GTSAC	3 cut(s)	484, 1146, 1765
NspI	RCATGY	1 cut(s)	1822
PaeI	GCATGC	1 cut(s)	1822
PciSI	GCTCTTC	2 cut(s)	762, 1246
PcsI	WCGNNNNNNNCGW	5 cut(s)	60, 66, 69, 75, 84
PctI	GAATGC	2 cut(s)	397, 2298
PdmI	GAANNNNTTC	2 cut(s)	1050, 1227
Pfl23II	CGTACG	1 cut(s)	2280
PfoI	TCCNGGA	2 cut(s)	762, 1054
PinAI	ACCGGT	1 cut(s)	2105
PkrI	GCNGC	8 cut(s)	298, 397, 421, 424, 1388, 1530, 1966, 1969
PleI	GAGTC	3 cut(s)	365, 440, 1519
PpsI	GAGTC	3 cut(s)	365, 440, 1519
PpuMI	RGGWCCY	1 cut(s)	636
PshAI	GACNNNNGTC	1 cut(s)	806
Psp124BI	GAGCTC	2 cut(s)	774, 1258
Psp5II	RGGWCCY	1 cut(s)	636
Psp6I	CCWGG	5 cut(s)	762, 1054, 1697, 1906, 2149
PspEI	GGTNACC	1 cut(s)	1765
PspFI	CCCAGC	1 cut(s)	1822
PspGI	CCWGG	5 cut(s)	762, 1054, 1697, 1906, 2149
PspLI	CGTACG	1 cut(s)	2280
PspN4I	GGNNCC	1 cut(s)	638
PspPI	GGNCC	4 cut(s)	636, 1306, 1546, 2108
PspPPI	RGGWCCY	1 cut(s)	636
PstI	CTGCAG	1 cut(s)	948
PstNI	CAGNNNCTG	2 cut(s)	367, 1970
PsuI	RGATCY	4 cut(s)	90, 1804, 1990, 2063
PvuII	CAGCTG	3 cut(s)	422, 1946, 1970
RsaI	GTAC	4 cut(s)	86, 556, 1451, 2282
RsaNI	GTAC	4 cut(s)	85, 555, 1450, 2281
SacI	GAGCTC	2 cut(s)	774, 1258
SapI	GCTCTTC	2 cut(s)	762, 1246
SaqAI	TTAA	8 cut(s)	36, 243, 305, 690, 932, 966, 1155, 1704
SatI	GCNGC	8 cut(s)	297, 396, 420, 423, 1387, 1529, 1965, 1968
Sau3AI	GATC	9 cut(s)	90, 130, 183, 319, 1363, 1752, 1804, 1990, 2063
Sau96I	GGNCC	4 cut(s)	636, 1306, 1546, 2108
ScaI	AGTACT	1 cut(s)	1451
SchI	GAGTC	3 cut(s)	365, 441, 1520
ScrFI	CCNGG	5 cut(s)	764, 1056, 1699, 1908, 2151
SduI	GDGCHC	6 cut(s)	11, 444, 774, 1258, 1397, 2229
SexAI	ACCWGGT	1 cut(s)	1906
SfaNI	GCATC	3 cut(s)	392, 1393, 1571
SfcI	CTRYAG	1 cut(s)	944
SinI	GGWCC	4 cut(s)	636, 1306, 1546, 2108
SmlI	CTYRAG	8 cut(s)	443, 965, 986, 1649, 1863, 2067, 2158, 2287
SmoI	CTYRAG	8 cut(s)	443, 965, 986, 1649, 1863, 2067, 2158, 2287
SpeI	ACTAGT	1 cut(s)	2135
SphI	GCATGC	1 cut(s)	1822
SsiI	CCGC	4 cut(s)	175, 1528, 1544, 1938
SspMI	CTAG	3 cut(s)	620, 653, 2136
SstI	GAGCTC	2 cut(s)	774, 1258
StyD4I	CCNGG	5 cut(s)	762, 1054, 1697, 1906, 2149
TaaI	ACNGT	3 cut(s)	554, 1790, 2251
TaiI	ACGT	3 cut(s)	57, 441, 1117
TaqI	TCGA	6 cut(s)	198, 810, 862, 1231, 1249, 2114
TatI	WGTACW	2 cut(s)	554, 1449
TauI	GCSGC	1 cut(s)	1531
Tru1I	TTAA	8 cut(s)	36, 243, 305, 690, 932, 966, 1155, 1704
Tru9I	TTAA	8 cut(s)	36, 243, 305, 690, 932, 966, 1155, 1704
TscAI	CASTG	2 cut(s)	654, 835
TseFI	GTSAC	3 cut(s)	484, 1146, 1765
TseI	GCWGC	7 cut(s)	296, 395, 419, 422, 1386, 1964, 1967
Tsp45I	GTSAC	3 cut(s)	484, 1146, 1765
TspDTI	ATGAA	9 cut(s)	420, 683, 768, 909, 996, 1218, 1347, 1851, 2067
TspGWI	ACGGA	3 cut(s)	694, 796, 2268
TspRI	CASTG	2 cut(s)	654, 835
Vha464I	CTTAAG	1 cut(s)	965
VpaK11BI	GGWCC	4 cut(s)	636, 1306, 1546, 2108
XagI	CCTNNNNNAGG	1 cut(s)	947
XapI	RAATTY	8 cut(s)	139, 776, 1099, 1260, 1335, 1584, 1926, 2240
XceI	RCATGY	1 cut(s)	1822
XcmI	CCANNNNNNNNNTGG	1 cut(s)	101
XmnI	GAANNNNTTC	2 cut(s)	1050, 1227
XspI	CTAG	3 cut(s)	620, 653, 2136
ZraI	GACGTC	1 cut(s)	55
ZrmI	AGTACT	1 cut(s)	1451

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.