Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004087

Physical Location & Seq

Genomic Coordinates Reverse (-)

48489238 .. 48498153

Gene Structure 8916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG268700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGATGTGGGGGACGATTGCCAACCTCAAAGAGAATCTCAACAAGATCGCGCAGGACGTGCACGACGACAGCGACGAAGAGGAGTTTGAGATCTACGCCTCAACCAATGGAGGAGGCGGCCAAGGTTCGTCCATTTCTGATCGGAGAAACTCCCACAGCTTCGCGCATTCCAAGTCGCCGTCGTCGCGCTCGCCGGTGTCGAATGGCGTCGGCGGCTCGGGTGTTAGTCCAGAGATTGAACAATACCGAGCTGAGATTAAGAGACTTCAGGAATCTGAGGCAGAAATTAAAGCATTATCAAAAAACTATGCAGCTTTGTTAAAGGAAAAGGAGGATCAAATTTCTAGATTGAATAAAGAAAATGGCTCATTGAAACAAAATCTGGACACAACTACTGCATCTCTAAATGCCTCTAGAATTGAAAACTACAAAGCGGCAGCAAATGGGACGAACTTGCACAAGGGAAGTAGTAATCAGTCACCCAATCGACAGCAAAGATCAACAGGTCAAGCAAAAACCAGCTATTCTGGACACCAGAAACAGAATGGTATTGTCTATACACAGGATGGGAATGGGATAAGCAATGGGATCGCGCATCTTTCAGACATGCAGGGGAATGAAAGGGAGCTTGCAGATTTACTAGGACTTGAGATGAAGCAATTGCGGATGGAGCTAGAAAAAGAACACAACCAGTTGGAAAATGTACAGCGAAAGTTACAAGAGGAGCAGAAATTGAATGGGACCATCCAGGAAGAGCTCAAATTTTTGAAGTTGGATAGAGAAAAAACCTCCATTGAGATGAGCAAAATACACAATGAATTGAATGACAAAACGTCTGAGATAAGTCGATTGCAAATGGAATTGAATAGGCGGGAGGATGTAAATGCAGAGAACTTTAAAAGATTGATCGCAACCCTGGAGAAGGAAAACAATAGTCTTAAGATGGATAAGAATGAACTTGAGGCAGCTTTGAGAACGAGCAGGACCTCAACTGATAAAAAACCCTTGGATGCATCAGAAAGTTTTCCTGGGAAGGAAGAAATGGAGCTGTCTTTGCGAAAATTTGATAGTGATTTGAAGGTAGCACGCCAGGAAAGGGACAAAGCCTTGCAAGAATTGAAACGCCTCAAACAGCATTTATTAGAAAAGGAATCTGAAGAATCAGAGAAAATGGATGAAGACAGCAAAATCATTGAAGAACTTCGACAAGCTAATGAACATCTAAGAGCTCAAATATTACATTTGGAGAAAGCTCTGAAGAAGGCAATTGCAAGTCAGGAGGATGTCAAGATGATCAACAACAATGAACTTCAGAAATCAAAGGAACTTATTGATGATCTGAATAAAAGACTTGCAAGTTGTATGAGCACAATAGATGCCAAAAATGTTGAACTGTTGAATCTTCAAACTGCTCTTGGTCAATACTATGCAGAAATTGAAGCGAAGGATGCAGATCATCAGGCTGAGGTATCAAAGGCCGAAAAGGAAGAAATTGTGTCCAAGCTTTCACAAGCTGAAAAGATAGTACTGGATTGGAAAAGCAGAGTGAATAAACTTGAGGAAGATAATGCAAAACTACGGCGAGCTGTTGAGCAGAGTATGACCAGGCTTAATAGGATGTCAATAGATTCAGACTTTCTTGTTGACAGGCGCATTGTGATCAAGTTACTGGTAACATACTTTCAGAGAAACCACAGTAAAGAGGTTTTGGATCTTATGACTCGTATGCTGGGATTCACTGATGAAGACAAGCAGAGAATAGGCGTTGCTCAAGGTGGCAAAGGTGTTGTTCGTGGTGTTTTAGGCCTGCCTGGCCGCCTTGTTGGCGGCATTTTGGGAGGCAGTTCAGCTGGAGGATCTGCAAATGCGGCATCTGAGAACCATTCCTTCGCAGATTTGTGGGTTGATTTTCTTCTCAAAGAAACTGAAGAAAGAGGGAGAAGGGAGTCTGCAGATGATTCGGGCCAGTCTCAGGAAGATACATATAAAAGAAATCCATTGGAACCTGACCATAAGCCATCCACCACTGGTTCTGCAGCTGACTTCTCGAGAACAAATTTATCTCCAATCCAGAACTCAAATCTTCCACCTTTCCGGAATAATTTTCGGCAGCCAGAACATTTTGATTCTGAATTTTCCACTGTTCCTCTCACATCGTCCGAGAACAATCCTTATGCCCCAAGACAGCTTCCAAGATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

733

Amino Acids

82.65

Weight (kDa)

5.78

Isoelectric Point (pI)

54.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46180 AT3G61570 AT3G61570
fragaria_vesca	FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532
malus_domestica	MD01G1072600.v1.1 MD07G1130300.v1.1
prunus_persica	Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1
pyrus_communis	pycom01g10180 pycom07g12720
rosa_chinensis	RchiOBHm_Chr1g0357861
rosa_laevigata	RLG00000027990
rosa_multiflora	Rmu_sc0007456.1_g000001 Rmu_sc0007456.1_g000005
rosa_roxburghii	Rroxscaffold_4G00298400 Rroxscaffold_4G00298440 Rroxscaffold_7G00215440
rosa_rugosa	Rorug01G0259100 Rorug01G0259200
rosa_samantha	Rh1AG273100 Rh1BG240400 Rh1CG256900 Rh1DG268700 Rh3AG149000 Rh3BG172200 Rh4AG248000 Rh5AG428400
rosa_wichuraiana	Rw1G024390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	4 cut(s)	50, 164, 187, 593
AccIII	TCCGGA	1 cut(s)	2094
AciI	CCGC	8 cut(s)	117, 213, 434, 664, 871, 1816, 1827, 1868
AclWI	GGATC	4 cut(s)	342, 596, 1719, 1864
AcoI	YGGCCR	2 cut(s)	118, 1813
AcsI	RAATTY	5 cut(s)	339, 761, 1061, 2056, 2132
AcuI	CTGAAG	5 cut(s)	251, 1176, 1277, 1295, 1947
AcyI	GRCGYC	1 cut(s)	207
AfaI	GTAC	2 cut(s)	705, 1527
AfiI	CCNNNNNNNGG	3 cut(s)	922, 1096, 1972
AflII	CTTAAG	1 cut(s)	938
AhdI	GACNNNNNGTC	1 cut(s)	832
AjiI	CACGTC	1 cut(s)	58
AjnI	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1604, 1810
Alw21I	GWGCWC	4 cut(s)	63, 759, 1231, 1370
Alw26I	GTCTC	2 cut(s)	256, 1974
Alw44I	GTGCAC	1 cut(s)	59
AlwI	GGATC	4 cut(s)	342, 596, 1719, 1864
Ama87I	CYCGRG	2 cut(s)	217, 2047
Aor13HI	TCCGGA	1 cut(s)	2094
AoxI	GGCC	5 cut(s)	118, 1476, 1804, 1813, 1963
ApaLI	GTGCAC	1 cut(s)	59
ApeKI	GCWGC	5 cut(s)	311, 437, 965, 2036, 2110
ApoI	RAATTY	5 cut(s)	339, 761, 1061, 2056, 2132
Asp700I	GAANNNNTTC	2 cut(s)	1023, 1200
AspLEI	GCGC	5 cut(s)	52, 166, 189, 595, 1653
AspS9I	GGNCC	3 cut(s)	741, 984, 1963
AsuHPI	GGTGA	1 cut(s)	471
AvaI	CYCGRG	2 cut(s)	217, 2047
AvaII	GGWCC	2 cut(s)	741, 984
BaeGI	GKGCMC	1 cut(s)	63
BanII	GRGCYC	2 cut(s)	759, 1231
BbsI	GAAGAC	2 cut(s)	1185, 1752
Bbv12I	GWGCWC	4 cut(s)	63, 759, 1231, 1370
BbvCI	CCTCAGC	1 cut(s)	1464
BbvI	GCAGC	5 cut(s)	323, 449, 977, 2048, 2122
BccI	CCATC	5 cut(s)	560, 661, 752, 937, 2026
BceAI	ACGGC	2 cut(s)	163, 1595
BcgI	CGANNNNNNTGC	4 cut(s)	571, 605, 1941, 1975
BciT130I	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
BclI	TGATCA	2 cut(s)	1293, 1659
BcoDI	GTCTC	2 cut(s)	256, 1974
BfaI	CTAG	4 cut(s)	345, 414, 641, 674
BfmI	CTRYAG	2 cut(s)	1950, 2034
BfrI	CTTAAG	1 cut(s)	938
BglI	GCCNNNNNGGC	2 cut(s)	1812, 1824
BglII	AGATCT	1 cut(s)	90
BmcAI	AGTACT	1 cut(s)	1527
Bme1390I	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
Bme18I	GGWCC	2 cut(s)	741, 984
BmeRI	GACNNNNNGTC	1 cut(s)	832
BmeT110I	CYCGRG	2 cut(s)	217, 2047
BmgBI	CACGTC	1 cut(s)	58
BmgT120I	GGNCC	3 cut(s)	741, 984, 1963
BmiI	GGNNCC	2 cut(s)	742, 2004
BmrFI	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
BmsI	GCATC	7 cut(s)	407, 604, 1000, 1022, 1366, 1438, 1880
BpiI	GAAGAC	2 cut(s)	1185, 1752
BpmI	CTGGAG	2 cut(s)	938, 1872
Bpu10I	CCTNAGC	1 cut(s)	1464
BpuEI	CTTGAG	4 cut(s)	668, 980, 1577, 1755
BsaBI	GATNNNNATC	1 cut(s)	1452
BsaHI	GRCGYC	1 cut(s)	207
BsaJI	CCNNGG	4 cut(s)	121, 915, 1005, 1028
BsaWI	WCCGGW	1 cut(s)	2094
Bsc4I	CCNNNNNNNGG	3 cut(s)	922, 1096, 1972
Bse118I	RCCGGY	1 cut(s)	193
Bse1I	ACTGG	5 cut(s)	691, 1533, 1674, 1966, 2032
Bse3DI	GCAATG	1 cut(s)	589
Bse8I	GATNNNNATC	1 cut(s)	1452
BseAI	TCCGGA	1 cut(s)	2094
BseBI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
BseDI	CCNNGG	4 cut(s)	121, 915, 1005, 1028
BseJI	GATNNNNATC	1 cut(s)	1452
BseLI	CCNNNNNNNGG	3 cut(s)	922, 1096, 1972
BseMI	GCAATG	1 cut(s)	589
BseMII	CTCAG	6 cut(s)	243, 267, 828, 1455, 1866, 1985
BseNI	ACTGG	5 cut(s)	691, 1533, 1674, 1966, 2032
BseRI	GAGGAG	3 cut(s)	95, 126, 737
BseSI	GKGCMC	1 cut(s)	63
BseXI	GCAGC	5 cut(s)	323, 449, 977, 2048, 2122
BseYI	CCCAGC	1 cut(s)	1729
Bsh1236I	CGCG	4 cut(s)	50, 164, 187, 593
BshFI	GGCC	5 cut(s)	120, 1478, 1806, 1815, 1965
BsiHKAI	GWGCWC	4 cut(s)	63, 759, 1231, 1370
BsiHKCI	CYCGRG	2 cut(s)	217, 2047
BsiSI	CCGG	2 cut(s)	194, 2095
BslFI	GGGAC	4 cut(s)	25, 460, 754, 1112
BslI	CCNNNNNNNGG	3 cut(s)	922, 1096, 1972
BsmAI	GTCTC	2 cut(s)	256, 1974
BsmFI	GGGAC	4 cut(s)	25, 460, 754, 1112
BsmI	GAATGC	1 cut(s)	166
BsnI	GGCC	5 cut(s)	120, 1478, 1806, 1815, 1965
BsoBI	CYCGRG	2 cut(s)	217, 2047
Bsp1286I	GDGCHC	4 cut(s)	63, 759, 1231, 1370
Bsp13I	TCCGGA	1 cut(s)	2094
Bsp1407I	TGTACA	1 cut(s)	703
BspACI	CCGC	8 cut(s)	117, 213, 434, 664, 871, 1816, 1827, 1868
BspANI	GGCC	5 cut(s)	120, 1478, 1806, 1815, 1965
BspCNI	CTCAG	6 cut(s)	244, 268, 829, 1456, 1867, 1984
BspEI	TCCGGA	1 cut(s)	2094
BspFNI	CGCG	4 cut(s)	50, 164, 187, 593
BspLI	GGNNCC	2 cut(s)	742, 2004
BspMAI	CTGCAG	2 cut(s)	1954, 2038
BspPI	GGATC	4 cut(s)	342, 596, 1719, 1864
BspQI	GCTCTTC	1 cut(s)	747
BspTI	CTTAAG	1 cut(s)	938
BsrDI	GCAATG	1 cut(s)	589
BsrFI	RCCGGY	1 cut(s)	193
BsrGI	TGTACA	1 cut(s)	703
BsrI	ACTGG	5 cut(s)	691, 1533, 1674, 1966, 2032
BssAI	RCCGGY	1 cut(s)	193
BssECI	CCNNGG	4 cut(s)	121, 915, 1005, 1028
BssNI	GRCGYC	1 cut(s)	207
BssT1I	CCWWGG	2 cut(s)	121, 1005
Bst2UI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
Bst4CI	ACNGT	3 cut(s)	1395, 1697, 2143
Bst6I	CTCTTC	2 cut(s)	72, 747
BstACI	GRCGYC	1 cut(s)	207
BstAFI	CTTAAG	1 cut(s)	938
BstAPI	GCANNNNNTGC	1 cut(s)	58
BstAUI	TGTACA	1 cut(s)	703
BstC8I	GCNNGC	5 cut(s)	191, 630, 1087, 1584, 1808
BstDEI	CTNAG	7 cut(s)	252, 276, 837, 1223, 1464, 1875, 1971
BstENI	CCTNNNNNAGG	1 cut(s)	920
BstFNI	CGCG	4 cut(s)	50, 164, 187, 593
BstHHI	GCGC	5 cut(s)	52, 166, 189, 595, 1653
BstMAI	GTCTC	2 cut(s)	256, 1974
BstMWI	GCNNNNNNNGC	9 cut(s)	58, 184, 213, 670, 1054, 1448, 1812, 1824, 1868
BstNI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
BstNSI	RCATGY	1 cut(s)	610
BstSCI	CCNGG	6 cut(s)	747, 915, 1027, 1089, 1604, 1810
BstSFI	CTRYAG	2 cut(s)	1950, 2034
BstSLI	GKGCMC	1 cut(s)	63
BstUI	CGCG	4 cut(s)	50, 164, 187, 593
BstV1I	GCAGC	5 cut(s)	323, 449, 977, 2048, 2122
BstV2I	GAAGAC	2 cut(s)	1185, 1752
BstX2I	RGATCY	3 cut(s)	90, 1711, 1856
BstYI	RGATCY	3 cut(s)	90, 1711, 1856
BsuRI	GGCC	5 cut(s)	120, 1478, 1806, 1815, 1965
BtrI	CACGTC	1 cut(s)	58
BtsIMutI	CAGTG	3 cut(s)	1737, 2025, 2139
Cac8I	GCNNGC	5 cut(s)	191, 630, 1087, 1584, 1808
CfoI	GCGC	5 cut(s)	52, 166, 189, 595, 1653
Cfr10I	RCCGGY	1 cut(s)	193
Cfr13I	GGNCC	3 cut(s)	741, 984, 1963
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	2 cut(s)	704, 1526
CviAII	CATG	1 cut(s)	607
CviQI	GTAC	2 cut(s)	704, 1526
DdeI	CTNAG	7 cut(s)	252, 276, 837, 1223, 1464, 1875, 1971
DraI	TTTAAA	1 cut(s)	898
DriI	GACNNNNNGTC	1 cut(s)	832
EaeI	YGGCCR	2 cut(s)	118, 1813
Eam1104I	CTCTTC	2 cut(s)	72, 747
Eam1105I	GACNNNNNGTC	1 cut(s)	832
EarI	CTCTTC	2 cut(s)	72, 747
Ecl136II	GAGCTC	2 cut(s)	757, 1229
Eco130I	CCWWGG	2 cut(s)	121, 1005
Eco147I	AGGCCT	1 cut(s)	1806
Eco24I	GRGCYC	2 cut(s)	759, 1231
Eco47I	GGWCC	2 cut(s)	741, 984
Eco53kI	GAGCTC	2 cut(s)	757, 1229
Eco57I	CTGAAG	5 cut(s)	251, 1176, 1277, 1295, 1947
Eco88I	CYCGRG	2 cut(s)	217, 2047
EcoICRI	GAGCTC	2 cut(s)	757, 1229
EcoNI	CCTNNNNNAGG	1 cut(s)	920
EcoO109I	RGGNCCY	1 cut(s)	984
EcoRII	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1604, 1810
EcoT14I	CCWWGG	2 cut(s)	121, 1005
EcoT22I	ATGCAT	1 cut(s)	1015
EcoT38I	GRGCYC	2 cut(s)	759, 1231
ErhI	CCWWGG	2 cut(s)	121, 1005
FaeI	CATG	1 cut(s)	610
FaqI	GGGAC	4 cut(s)	25, 460, 754, 1112
FatI	CATG	1 cut(s)	606
FauI	CCCGC	1 cut(s)	864
FbaI	TGATCA	2 cut(s)	1293, 1659
FriOI	GRGCYC	2 cut(s)	759, 1231
FspBI	CTAG	4 cut(s)	345, 414, 641, 674
GlaI	GCGC	5 cut(s)	51, 165, 188, 594, 1652
GsaI	CCCAGC	1 cut(s)	1733
GsuI	CTGGAG	2 cut(s)	938, 1872
HaeIII	GGCC	5 cut(s)	120, 1478, 1806, 1815, 1965
HapII	CCGG	2 cut(s)	194, 2095
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	5 cut(s)	52, 166, 189, 595, 1653
Hin1I	GRCGYC	1 cut(s)	207
Hin1II	CATG	1 cut(s)	610
Hin6I	GCGC	5 cut(s)	50, 164, 187, 593, 1651
HinP1I	GCGC	5 cut(s)	50, 164, 187, 593, 1651
HincII	GTYRAC	1 cut(s)	1645
HindII	GTYRAC	1 cut(s)	1645
HindIII	AAGCTT	1 cut(s)	1502
HpaII	CCGG	2 cut(s)	194, 2095
HphI	GGTGA	1 cut(s)	471
Hpy166II	GTNNAC	2 cut(s)	61, 1645
Hpy8I	GTNNAC	2 cut(s)	61, 1645
Hpy99I	CGWCG	5 cut(s)	68, 77, 184, 187, 212
HpyAV	CCTTC	7 cut(s)	916, 1027, 1072, 1255, 1438, 1897, 1935
HpyCH4III	ACNGT	3 cut(s)	1395, 1697, 2143
HpyCH4IV	ACGT	2 cut(s)	57, 833
HpyF10VI	GCNNNNNNNGC	9 cut(s)	58, 184, 213, 670, 1054, 1448, 1812, 1824, 1868
HpyF3I	CTNAG	7 cut(s)	252, 276, 837, 1223, 1464, 1875, 1971
HpySE526I	ACGT	2 cut(s)	57, 833
Hsp92I	GRCGYC	1 cut(s)	207
Hsp92II	CATG	1 cut(s)	610
HspAI	GCGC	5 cut(s)	50, 164, 187, 593, 1651
Kpn2I	TCCGGA	1 cut(s)	2094
Ksp22I	TGATCA	2 cut(s)	1293, 1659
LguI	GCTCTTC	1 cut(s)	747
LmnI	GCTCC	4 cut(s)	625, 670, 724, 1045
Lsp1109I	GCAGC	5 cut(s)	323, 449, 977, 2048, 2122
LweI	GCATC	7 cut(s)	407, 604, 1000, 1022, 1366, 1438, 1880
MaeI	CTAG	4 cut(s)	345, 414, 641, 674
MaeII	ACGT	2 cut(s)	57, 833
MaeIII	GTNAC	4 cut(s)	477, 714, 1665, 1672
MfeI	CAATTG	2 cut(s)	659, 1266
MflI	RGATCY	3 cut(s)	90, 1711, 1856
MhlI	GDGCHC	4 cut(s)	63, 759, 1231, 1370
MlyI	GAGTC	2 cut(s)	1714, 1955
MmeI	TCCRAC	2 cut(s)	675, 753
Mph1103I	ATGCAT	1 cut(s)	1015
MroI	TCCGGA	1 cut(s)	2094
MroXI	GAANNNNTTC	2 cut(s)	1023, 1200
MseI	TTAA	6 cut(s)	258, 288, 320, 897, 939, 1611
MslI	CAYNNNNRTG	1 cut(s)	797
MspA1I	CMGCKG	2 cut(s)	1850, 2039
MspCI	CTTAAG	1 cut(s)	938
MspI	CCGG	2 cut(s)	194, 2095
MspR9I	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
MunI	CAATTG	2 cut(s)	659, 1266
Mva1269I	GAATGC	1 cut(s)	166
MvaI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
MvnI	CGCG	4 cut(s)	50, 164, 187, 593
MwoI	GCNNNNNNNGC	9 cut(s)	58, 184, 213, 670, 1054, 1448, 1812, 1824, 1868
NlaIII	CATG	1 cut(s)	610
NlaIV	GGNNCC	2 cut(s)	742, 2004
NmuCI	GTSAC	1 cut(s)	477
NsiI	ATGCAT	1 cut(s)	1015
NspI	RCATGY	1 cut(s)	610
PaeR7I	CTCGAG	1 cut(s)	2047
PceI	AGGCCT	1 cut(s)	1806
PciSI	GCTCTTC	1 cut(s)	747
PcsI	WCGNNNNNNNCGW	5 cut(s)	54, 63, 69, 72, 197
PctI	GAATGC	1 cut(s)	166
PdmI	GAANNNNTTC	2 cut(s)	1023, 1200
PfeI	GAWTC	9 cut(s)	34, 272, 1151, 1160, 1399, 1628, 1734, 1958, 2126
PfoI	TCCNGGA	1 cut(s)	747
PleI	GAGTC	2 cut(s)	1714, 1954
PpsI	GAGTC	2 cut(s)	1714, 1954
PpuMI	RGGWCCY	1 cut(s)	984
Psp124BI	GAGCTC	2 cut(s)	759, 1231
Psp5II	RGGWCCY	1 cut(s)	984
Psp6I	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1604, 1810
PspFI	CCCAGC	1 cut(s)	1729
PspGI	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1604, 1810
PspN4I	GGNNCC	2 cut(s)	742, 2004
PspPI	GGNCC	3 cut(s)	741, 984, 1963
PspPPI	RGGWCCY	1 cut(s)	984
PstI	CTGCAG	2 cut(s)	1954, 2038
PsuI	RGATCY	3 cut(s)	90, 1711, 1856
PvuII	CAGCTG	2 cut(s)	1850, 2039
RsaI	GTAC	2 cut(s)	705, 1527
RsaNI	GTAC	2 cut(s)	704, 1526
RseI	CAYNNNNRTG	1 cut(s)	797
SacI	GAGCTC	2 cut(s)	759, 1231
SapI	GCTCTTC	1 cut(s)	747
SaqAI	TTAA	6 cut(s)	258, 288, 320, 897, 939, 1611
Sau96I	GGNCC	3 cut(s)	741, 984, 1963
ScaI	AGTACT	1 cut(s)	1527
SchI	GAGTC	2 cut(s)	1714, 1955
ScrFI	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1606, 1812
SduI	GDGCHC	4 cut(s)	63, 759, 1231, 1370
SfaNI	GCATC	7 cut(s)	407, 604, 1000, 1022, 1366, 1438, 1880
SfcI	CTRYAG	2 cut(s)	1950, 2034
SfiI	GGCCNNNNNGGCC	1 cut(s)	1812
Sfr274I	CTCGAG	1 cut(s)	2047
SgrAI	CRCCGGYG	1 cut(s)	193
SinI	GGWCC	2 cut(s)	741, 984
SlaI	CTCGAG	1 cut(s)	2047
SmiMI	CAYNNNNRTG	1 cut(s)	797
SmlI	CTYRAG	6 cut(s)	647, 938, 959, 1556, 1770, 2047
SmoI	CTYRAG	6 cut(s)	647, 938, 959, 1556, 1770, 2047
SseBI	AGGCCT	1 cut(s)	1806
SsiI	CCGC	8 cut(s)	117, 213, 434, 664, 871, 1816, 1827, 1868
SspI	AATATT	1 cut(s)	1236
SspMI	CTAG	4 cut(s)	345, 414, 641, 674
SstI	GAGCTC	2 cut(s)	759, 1231
StuI	AGGCCT	1 cut(s)	1806
StyD4I	CCNGG	6 cut(s)	747, 915, 1027, 1089, 1604, 1810
StyI	CCWWGG	2 cut(s)	121, 1005
TaaI	ACNGT	3 cut(s)	1395, 1697, 2143
TaiI	ACGT	2 cut(s)	60, 836
TaqI	TCGA	5 cut(s)	200, 487, 847, 1204, 2048
TatI	WGTACW	2 cut(s)	703, 1525
TauI	GCSGC	6 cut(s)	120, 216, 437, 1818, 1830, 1871
TfiI	GAWTC	9 cut(s)	34, 272, 1151, 1160, 1399, 1628, 1734, 1958, 2126
Tru1I	TTAA	6 cut(s)	258, 288, 320, 897, 939, 1611
Tru9I	TTAA	6 cut(s)	258, 288, 320, 897, 939, 1611
TscAI	CASTG	3 cut(s)	1744, 2032, 2146
TseFI	GTSAC	1 cut(s)	477
TseI	GCWGC	5 cut(s)	311, 437, 965, 2036, 2110
Tsp45I	GTSAC	1 cut(s)	477
TspDTI	ATGAA	8 cut(s)	633, 668, 831, 969, 1191, 1230, 1320, 1758
TspRI	CASTG	3 cut(s)	1744, 2032, 2146
Vha464I	CTTAAG	1 cut(s)	938
VneI	GTGCAC	1 cut(s)	59
VpaK11BI	GGWCC	2 cut(s)	741, 984
XagI	CCTNNNNNAGG	1 cut(s)	920
XapI	RAATTY	5 cut(s)	339, 761, 1061, 2056, 2132
XbaI	TCTAGA	2 cut(s)	344, 413
XceI	RCATGY	1 cut(s)	610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	542
XhoI	CTCGAG	1 cut(s)	2047
XmnI	GAANNNNTTC	2 cut(s)	1023, 1200
XspI	CTAG	4 cut(s)	345, 414, 641, 674
ZrmI	AGTACT	1 cut(s)	1527
Zsp2I	ATGCAT	1 cut(s)	1015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.