Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0004087

Physical Location & Seq

Genomic Coordinates Forward (+)

17554764 .. 17560680

Gene Structure 5917 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027990

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGTGGGGGACGATTGCCAACCTCAAAGAGAATCTCAACAAGATCGCGCAGGACGTGCACGACGACAGCGACGAAGAGGAGTTTGAGATCTACGCGTCAGCCAATGGAGGAGGCGGCCAAGGTTCGTCCATTTCTGATCGGAGAAACTCCCACAGCTTCGCGCATTCCAAGTCGCCGTCGTCGCGCTCGCCCGTGTCGAATGGCGTCGGCGGCTCCGGTGTTAGTCCAGAGATGAATAATCGGTTGAGTCTAATAAGCCTTGAGCTGGAGCAAGTTCTGGTTAGTGGAAGTAGTAATCAGTCACCCAACCGACAGCAAAGATCGACAGGTCAAGCAAAAACCAGCTATTCTGGACACCAGAAACAGAATGGTATTATCTATACACAGGATGGGAATGGGATAAGCAATGGGATTGCGCATCTTTCAGACATGCAGGGGAATGAAAGGGAGCTTGCAGATTTACTAGGACTTGAGATGAAGCAATTGCGGATGGAGCTAGAAAAAGAACACCACCAGTTGGAAAATGTACAGCGAAAGTTACAAGAGGAGCAGAAATTGAATGGGACCATCCAGGAAGAGCTCAAATTTATGAAGTTGGATAGAGAAAAAACCTCCATTGAGATGAGCAAAATACACAATGAATTGAATGACAAAACGTCTGAGATAAGTCGATTGCAAATGGAATTGAATAGGCGGGAGGATGTAAATGCAGAGAACTTTAAAAGATTGATCGCAACCCTGGAGAAGGAAAACAATAGTCTTAAGATGGAGAAGAATGAACTTGAGGCAGCTTTGAGAACGAGCAGGACCTCAACTGATAAAAAACCCTTAGATGCATTAGAAAGTTTTCCTGGGAAGGAAGAAATGGAGCTATCTTTGCGAAAATTTGATAGTGATTTGAAGGTAGCACGCCAGGAAAGGGACAAAGCCTTGCAAGAATTGAAACGCCTCAAACAGCATTTATTAGAAAAGGAATCTGAAGAATCAGAGAAAATGGATGAAGACAGCAAAATCATTGAAGAACTTCGACAAGCTAATGAACATCTAAGAGCTCAAATATTACATTTGGAGAAAGCTCTGAAGAAGGCAATTGCAAGTCAGGAGGATGTCAAGATGATCAACAACAAAGAACTTCAGAAATCAAAGGAACTTATTGATGATCTGAATAAAAGACTTGCAAGTTGTATGAGCACAATAGATGCCAAAAATGTTGAACTGTTGAATCTTCAAACTGCTCTTGGTCAATACTATGCAGAAATTGAAGCGAAGGAACATTTGGAAGGAGATTTGGCTAGGGCAAGAGAGGAATCAGCTAGGCTTTCTCGTCTCTTGAAAGATGCAGATCATCAGGCTGAGGTATCGAAGGCCGAAAAGGAGGAAATTGTGTCCAAGCTTTCACAAGCTGAAAAGATAGTACTGGATTGGAAAAGCAGAGTGAATAAACTTGAGGAAGATAATGCAAAACTACGGCGAGCTGTTGAGCAGAGTATGACCAGGCTTAATAGGATGTCAATCGATTCAGACTTTCTTGTTGACAGGCGCATTGTGATCAAGTTACTGGTAACATACTTTCAGAGAAACCACAGTAAAGAGGTTTTGGATCTTATGACTCGTATGCTGGGATTCACTGATGAAGACAAGCAGAGAATAGGCGTTGCTCAAGGTGGCAAAGGTGTTGTTCGTGGTGTTTTAGGCCTGCCTGGCCGCCTTGTTGGCGGCATTTTGGGAGGCAGTTCAGCTGGAGGATCTGCAAATGCGGCATCTGAGAACCATTCCTTCGCAGATTTGTGGGTTGATTTTCTTCTCAAAGAAACTGAAGAAAGAGAGAGAAGGGAGTCTGCAGATGATTCGGGCCGGTCTCAGGAAGATACACATAAAAGAAATCCATTGGAACCTGACCATAAGCCATCCACCACTGGTTCTGCAGCTGACTTCTCGAGAACAAATTTATCTCCAATCCAGAACTCAAATCTTCCACCTTTCCGGAATAATTTTCGGCAGCCAGAACATTCTGATTCTGAATTTTCCACTGTTCCTCTCACATCGTCAGAGAACAATCCTTATGCCCCAAGACAGCTTCCAAGATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

697

Amino Acids

78.62

Weight (kDa)

5.74

Isoelectric Point (pI)

54.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46180 AT3G61570 AT3G61570
fragaria_vesca	FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532
malus_domestica	MD01G1072600.v1.1 MD07G1130300.v1.1
prunus_persica	Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1
pyrus_communis	pycom01g10180 pycom07g12720
rosa_chinensis	RchiOBHm_Chr1g0357861
rosa_laevigata	RLG00000027990
rosa_multiflora	Rmu_sc0007456.1_g000001 Rmu_sc0007456.1_g000005
rosa_roxburghii	Rroxscaffold_4G00298400 Rroxscaffold_4G00298440 Rroxscaffold_7G00215440
rosa_rugosa	Rorug01G0259100 Rorug01G0259200
rosa_samantha	Rh1AG273100 Rh1BG240400 Rh1CG256900 Rh1DG268700 Rh3AG149000 Rh3BG172200 Rh4AG248000 Rh5AG428400
rosa_wichuraiana	Rw1G024390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	417
AccB7I	CCANNNNNTGG	1 cut(s)	517
AccII	CGCG	4 cut(s)	47, 95, 161, 184
AccIII	TCCGGA	1 cut(s)	1983
AciI	CCGC	7 cut(s)	114, 210, 487, 694, 1705, 1716, 1757
AclWI	GGATC	2 cut(s)	1608, 1753
AcoI	YGGCCR	2 cut(s)	115, 1702
AcsI	RAATTY	4 cut(s)	584, 884, 1945, 2021
AcuI	CTGAAG	4 cut(s)	999, 1100, 1118, 1836
AcyI	GRCGYC	1 cut(s)	204
AfaI	GTAC	2 cut(s)	528, 1416
AfiI	CCNNNNNNNGG	5 cut(s)	265, 517, 745, 919, 1861
AflII	CTTAAG	1 cut(s)	761
AflIII	ACRYGT	1 cut(s)	93
AhdI	GACNNNNNGTC	1 cut(s)	655
AjiI	CACGTC	1 cut(s)	55
AjnI	CCWGG	6 cut(s)	570, 738, 850, 912, 1493, 1699
AjuI	GAANNNNNNNTTGG	2 cut(s)	1259, 1291
Alw21I	GWGCWC	4 cut(s)	60, 582, 1054, 1193
Alw26I	GTCTC	2 cut(s)	1331, 1863
Alw44I	GTGCAC	1 cut(s)	56
AlwI	GGATC	2 cut(s)	1608, 1753
Ama87I	CYCGRG	1 cut(s)	1936
Aor13HI	TCCGGA	1 cut(s)	1983
AoxI	GGCC	5 cut(s)	115, 1365, 1693, 1702, 1852
ApaLI	GTGCAC	1 cut(s)	56
ApeKI	GCWGC	3 cut(s)	788, 1925, 1999
ApoI	RAATTY	4 cut(s)	584, 884, 1945, 2021
Asp700I	GAANNNNTTC	2 cut(s)	846, 1023
AspLEI	GCGC	5 cut(s)	49, 163, 186, 418, 1542
AspS9I	GGNCC	3 cut(s)	564, 807, 1852
AsuHPI	GGTGA	1 cut(s)	294
AvaI	CYCGRG	1 cut(s)	1936
AvaII	GGWCC	2 cut(s)	564, 807
BaeGI	GKGCMC	1 cut(s)	60
BanII	GRGCYC	2 cut(s)	582, 1054
BbsI	GAAGAC	2 cut(s)	1008, 1641
Bbv12I	GWGCWC	4 cut(s)	60, 582, 1054, 1193
BbvCI	CCTCAGC	1 cut(s)	1353
BbvI	GCAGC	3 cut(s)	800, 1937, 2011
BccI	CCATC	5 cut(s)	383, 484, 575, 760, 1915
BceAI	ACGGC	2 cut(s)	160, 1484
BcgI	CGANNNNNNTGC	2 cut(s)	1830, 1864
BciT130I	CCWGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
BclI	TGATCA	2 cut(s)	1116, 1548
BcoDI	GTCTC	2 cut(s)	1331, 1863
BfaI	CTAG	4 cut(s)	464, 497, 1293, 1314
BfmI	CTRYAG	2 cut(s)	1839, 1923
BfrI	CTTAAG	1 cut(s)	761
BglI	GCCNNNNNGGC	2 cut(s)	1701, 1713
BglII	AGATCT	1 cut(s)	87
BisI	GCNGC	8 cut(s)	115, 211, 789, 1705, 1717, 1758, 1926, 2000
BlsI	GCNGC	8 cut(s)	116, 212, 790, 1706, 1718, 1759, 1927, 2001
BmcAI	AGTACT	1 cut(s)	1416
Bme1390I	CCNGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
Bme18I	GGWCC	2 cut(s)	564, 807
BmeRI	GACNNNNNGTC	1 cut(s)	655
BmeT110I	CYCGRG	1 cut(s)	1936
BmgBI	CACGTC	1 cut(s)	55
BmgT120I	GGNCC	3 cut(s)	564, 807, 1852
BmiI	GGNNCC	3 cut(s)	214, 565, 1893
BmrFI	CCNGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
BmsI	GCATC	5 cut(s)	427, 823, 1189, 1327, 1769
BpiI	GAAGAC	2 cut(s)	1008, 1641
BpmI	CTGGAG	3 cut(s)	287, 761, 1761
Bpu10I	CCTNAGC	1 cut(s)	1353
BpuEI	CTTGAG	5 cut(s)	281, 491, 803, 1466, 1644
Bsa29I	ATCGAT	1 cut(s)	1515
BsaBI	GATNNNNATC	2 cut(s)	1341, 1511
BsaHI	GRCGYC	1 cut(s)	204
BsaI	GGTCTC	1 cut(s)	1863
BsaJI	CCNNGG	3 cut(s)	118, 738, 851
BsaWI	WCCGGW	2 cut(s)	215, 1983
Bsc4I	CCNNNNNNNGG	5 cut(s)	265, 517, 745, 919, 1861
Bse118I	RCCGGY	1 cut(s)	1854
Bse1I	ACTGG	4 cut(s)	514, 1422, 1563, 1921
Bse3DI	GCAATG	1 cut(s)	412
Bse8I	GATNNNNATC	2 cut(s)	1341, 1511
BseAI	TCCGGA	1 cut(s)	1983
BseBI	CCWGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
BseCI	ATCGAT	1 cut(s)	1515
BseDI	CCNNGG	3 cut(s)	118, 738, 851
BseGI	GGATG	8 cut(s)	394, 495, 567, 706, 1003, 1111, 1512, 1907
BseJI	GATNNNNATC	2 cut(s)	1341, 1511
BseLI	CCNNNNNNNGG	5 cut(s)	265, 517, 745, 919, 1861
BseMI	GCAATG	1 cut(s)	412
BseMII	CTCAG	4 cut(s)	651, 1344, 1755, 1874
BseNI	ACTGG	4 cut(s)	514, 1422, 1563, 1921
BseRI	GAGGAG	3 cut(s)	92, 123, 560
BseSI	GKGCMC	1 cut(s)	60
BseXI	GCAGC	3 cut(s)	800, 1937, 2011
BseYI	CCCAGC	1 cut(s)	1618
Bsh1236I	CGCG	4 cut(s)	47, 95, 161, 184
BshFI	GGCC	5 cut(s)	117, 1367, 1695, 1704, 1854
BshVI	ATCGAT	1 cut(s)	1515
BsiHKAI	GWGCWC	4 cut(s)	60, 582, 1054, 1193
BsiHKCI	CYCGRG	1 cut(s)	1936
BsiSI	CCGG	3 cut(s)	216, 1855, 1984
BslFI	GGGAC	3 cut(s)	22, 577, 935
BslI	CCNNNNNNNGG	5 cut(s)	265, 517, 745, 919, 1861
BsmAI	GTCTC	2 cut(s)	1331, 1863
BsmBI	CGTCTC	1 cut(s)	1331
BsmFI	GGGAC	3 cut(s)	22, 577, 935
BsmI	GAATGC	1 cut(s)	163
BsnI	GGCC	5 cut(s)	117, 1367, 1695, 1704, 1854
Bso31I	GGTCTC	1 cut(s)	1863
BsoBI	CYCGRG	1 cut(s)	1936
Bsp1286I	GDGCHC	4 cut(s)	60, 582, 1054, 1193
Bsp13I	TCCGGA	1 cut(s)	1983
Bsp1407I	TGTACA	1 cut(s)	526
BspACI	CCGC	7 cut(s)	114, 210, 487, 694, 1705, 1716, 1757
BspANI	GGCC	5 cut(s)	117, 1367, 1695, 1704, 1854
BspCNI	CTCAG	4 cut(s)	652, 1345, 1756, 1873
BspDI	ATCGAT	1 cut(s)	1515
BspEI	TCCGGA	1 cut(s)	1983
BspFNI	CGCG	4 cut(s)	47, 95, 161, 184
BspLI	GGNNCC	3 cut(s)	214, 565, 1893
BspMAI	CTGCAG	2 cut(s)	1843, 1927
BspPI	GGATC	2 cut(s)	1608, 1753
BspQI	GCTCTTC	1 cut(s)	570
BspTI	CTTAAG	1 cut(s)	761
BspTNI	GGTCTC	1 cut(s)	1863
BsrDI	GCAATG	1 cut(s)	412
BsrFI	RCCGGY	1 cut(s)	1854
BsrGI	TGTACA	1 cut(s)	526
BsrI	ACTGG	4 cut(s)	514, 1422, 1563, 1921
BssAI	RCCGGY	1 cut(s)	1854
BssECI	CCNNGG	3 cut(s)	118, 738, 851
BssNI	GRCGYC	1 cut(s)	204
BssT1I	CCWWGG	1 cut(s)	118
Bst2UI	CCWGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
Bst4CI	ACNGT	3 cut(s)	1218, 1586, 2032
Bst6I	CTCTTC	2 cut(s)	69, 570
BstACI	GRCGYC	1 cut(s)	204
BstAFI	CTTAAG	1 cut(s)	761
BstAPI	GCANNNNNTGC	1 cut(s)	55
BstAUI	TGTACA	1 cut(s)	526
BstC8I	GCNNGC	5 cut(s)	188, 453, 910, 1473, 1697
BstDEI	CTNAG	6 cut(s)	660, 829, 1046, 1353, 1764, 1860
BstENI	CCTNNNNNAGG	1 cut(s)	743
BstF5I	GGATG	8 cut(s)	394, 495, 567, 706, 1003, 1111, 1512, 1907
BstFNI	CGCG	4 cut(s)	47, 95, 161, 184
BstHHI	GCGC	5 cut(s)	49, 163, 186, 418, 1542
BstMAI	GTCTC	2 cut(s)	1331, 1863
BstMWI	GCNNNNNNNGC	8 cut(s)	55, 181, 210, 493, 877, 1701, 1713, 1757
BstNI	CCWGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
BstNSI	RCATGY	1 cut(s)	433
BstSCI	CCNGG	6 cut(s)	570, 738, 850, 912, 1493, 1699
BstSFI	CTRYAG	2 cut(s)	1839, 1923
BstSLI	GKGCMC	1 cut(s)	60
BstUI	CGCG	4 cut(s)	47, 95, 161, 184
BstV1I	GCAGC	3 cut(s)	800, 1937, 2011
BstV2I	GAAGAC	2 cut(s)	1008, 1641
BstX2I	RGATCY	3 cut(s)	87, 1600, 1745
BstYI	RGATCY	3 cut(s)	87, 1600, 1745
Bsu15I	ATCGAT	1 cut(s)	1515
BsuRI	GGCC	5 cut(s)	117, 1367, 1695, 1704, 1854
BsuTUI	ATCGAT	1 cut(s)	1515
BtrI	CACGTC	1 cut(s)	55
BtsCI	GGATG	8 cut(s)	394, 495, 567, 706, 1003, 1111, 1512, 1907
BtsIMutI	CAGTG	3 cut(s)	1626, 1914, 2028
Cac8I	GCNNGC	5 cut(s)	188, 453, 910, 1473, 1697
CfoI	GCGC	5 cut(s)	49, 163, 186, 418, 1542
Cfr10I	RCCGGY	1 cut(s)	1854
Cfr13I	GGNCC	3 cut(s)	564, 807, 1852
ClaI	ATCGAT	1 cut(s)	1515
CseI	GACGC	2 cut(s)	84, 193
Csp6I	GTAC	2 cut(s)	527, 1415
CviAII	CATG	1 cut(s)	430
CviQI	GTAC	2 cut(s)	527, 1415
DdeI	CTNAG	6 cut(s)	660, 829, 1046, 1353, 1764, 1860
DraI	TTTAAA	1 cut(s)	721
DriI	GACNNNNNGTC	1 cut(s)	655
EaeI	YGGCCR	2 cut(s)	115, 1702
Eam1104I	CTCTTC	2 cut(s)	69, 570
Eam1105I	GACNNNNNGTC	1 cut(s)	655
EarI	CTCTTC	2 cut(s)	69, 570
Ecl136II	GAGCTC	2 cut(s)	580, 1052
Eco130I	CCWWGG	1 cut(s)	118
Eco147I	AGGCCT	1 cut(s)	1695
Eco24I	GRGCYC	2 cut(s)	582, 1054
Eco31I	GGTCTC	1 cut(s)	1863
Eco47I	GGWCC	2 cut(s)	564, 807
Eco53kI	GAGCTC	2 cut(s)	580, 1052
Eco57I	CTGAAG	4 cut(s)	999, 1100, 1118, 1836
Eco88I	CYCGRG	1 cut(s)	1936
EcoICRI	GAGCTC	2 cut(s)	580, 1052
EcoNI	CCTNNNNNAGG	1 cut(s)	743
EcoO109I	RGGNCCY	1 cut(s)	807
EcoRII	CCWGG	6 cut(s)	570, 738, 850, 912, 1493, 1699
EcoT14I	CCWWGG	1 cut(s)	118
EcoT22I	ATGCAT	1 cut(s)	838
EcoT38I	GRGCYC	2 cut(s)	582, 1054
ErhI	CCWWGG	1 cut(s)	118
Esp3I	CGTCTC	1 cut(s)	1331
FaeI	CATG	1 cut(s)	433
FaqI	GGGAC	3 cut(s)	22, 577, 935
FatI	CATG	1 cut(s)	429
FauI	CCCGC	1 cut(s)	687
FbaI	TGATCA	2 cut(s)	1116, 1548
Fnu4HI	GCNGC	8 cut(s)	115, 211, 789, 1705, 1717, 1758, 1926, 2000
FokI	GGATG	8 cut(s)	401, 502, 554, 713, 1010, 1118, 1519, 1894
FriOI	GRGCYC	2 cut(s)	582, 1054
Fsp4HI	GCNGC	8 cut(s)	115, 211, 789, 1705, 1717, 1758, 1926, 2000
FspBI	CTAG	4 cut(s)	464, 497, 1293, 1314
FspI	TGCGCA	1 cut(s)	417
GlaI	GCGC	5 cut(s)	48, 162, 185, 417, 1541
GluI	GCNGC	8 cut(s)	115, 211, 789, 1705, 1717, 1758, 1926, 2000
GsaI	CCCAGC	1 cut(s)	1622
GsuI	CTGGAG	3 cut(s)	287, 761, 1761
HaeIII	GGCC	5 cut(s)	117, 1367, 1695, 1704, 1854
HapII	CCGG	3 cut(s)	216, 1855, 1984
HgaI	GACGC	2 cut(s)	84, 193
HhaI	GCGC	5 cut(s)	49, 163, 186, 418, 1542
Hin1I	GRCGYC	1 cut(s)	204
Hin1II	CATG	1 cut(s)	433
Hin6I	GCGC	5 cut(s)	47, 161, 184, 416, 1540
HinP1I	GCGC	5 cut(s)	47, 161, 184, 416, 1540
HincII	GTYRAC	1 cut(s)	1534
HindII	GTYRAC	1 cut(s)	1534
HindIII	AAGCTT	1 cut(s)	1391
HpaII	CCGG	3 cut(s)	216, 1855, 1984
HphI	GGTGA	1 cut(s)	294
Hpy166II	GTNNAC	2 cut(s)	58, 1534
Hpy8I	GTNNAC	2 cut(s)	58, 1534
Hpy99I	CGWCG	5 cut(s)	65, 74, 181, 184, 209
HpyAV	CCTTC	9 cut(s)	739, 850, 895, 1078, 1261, 1274, 1357, 1786, 1824
HpyCH4III	ACNGT	3 cut(s)	1218, 1586, 2032
HpyCH4IV	ACGT	2 cut(s)	54, 656
HpyF10VI	GCNNNNNNNGC	8 cut(s)	55, 181, 210, 493, 877, 1701, 1713, 1757
HpyF3I	CTNAG	6 cut(s)	660, 829, 1046, 1353, 1764, 1860
HpySE526I	ACGT	2 cut(s)	54, 656
Hsp92I	GRCGYC	1 cut(s)	204
Hsp92II	CATG	1 cut(s)	433
HspAI	GCGC	5 cut(s)	47, 161, 184, 416, 1540
Kpn2I	TCCGGA	1 cut(s)	1983
Ksp22I	TGATCA	2 cut(s)	1116, 1548
LguI	GCTCTTC	1 cut(s)	570
LmnI	GCTCC	6 cut(s)	218, 268, 448, 493, 547, 868
Lsp1109I	GCAGC	3 cut(s)	800, 1937, 2011
LweI	GCATC	5 cut(s)	427, 823, 1189, 1327, 1769
MaeI	CTAG	4 cut(s)	464, 497, 1293, 1314
MaeII	ACGT	2 cut(s)	54, 656
MaeIII	GTNAC	4 cut(s)	300, 537, 1554, 1561
MfeI	CAATTG	2 cut(s)	482, 1089
MflI	RGATCY	3 cut(s)	87, 1600, 1745
MhlI	GDGCHC	4 cut(s)	60, 582, 1054, 1193
MluI	ACGCGT	1 cut(s)	93
MlyI	GAGTC	3 cut(s)	256, 1603, 1844
MmeI	TCCRAC	2 cut(s)	498, 576
Mph1103I	ATGCAT	1 cut(s)	838
MroI	TCCGGA	1 cut(s)	1983
MroXI	GAANNNNTTC	2 cut(s)	846, 1023
MseI	TTAA	3 cut(s)	720, 762, 1500
MslI	CAYNNNNRTG	1 cut(s)	620
MspA1I	CMGCKG	2 cut(s)	1739, 1928
MspCI	CTTAAG	1 cut(s)	761
MspI	CCGG	3 cut(s)	216, 1855, 1984
MspR9I	CCNGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
MunI	CAATTG	2 cut(s)	482, 1089
Mva1269I	GAATGC	1 cut(s)	163
MvaI	CCWGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
MvnI	CGCG	4 cut(s)	47, 95, 161, 184
MwoI	GCNNNNNNNGC	8 cut(s)	55, 181, 210, 493, 877, 1701, 1713, 1757
NlaIII	CATG	1 cut(s)	433
NlaIV	GGNNCC	3 cut(s)	214, 565, 1893
NmuCI	GTSAC	1 cut(s)	300
NsbI	TGCGCA	1 cut(s)	417
NsiI	ATGCAT	1 cut(s)	838
NspI	RCATGY	1 cut(s)	433
PaeR7I	CTCGAG	1 cut(s)	1936
PceI	AGGCCT	1 cut(s)	1695
PciSI	GCTCTTC	1 cut(s)	570
PcsI	WCGNNNNNNNCGW	5 cut(s)	51, 60, 66, 69, 194
PctI	GAATGC	1 cut(s)	163
PdmI	GAANNNNTTC	2 cut(s)	846, 1023
PfeI	GAWTC	9 cut(s)	31, 974, 983, 1222, 1307, 1517, 1623, 1847, 2015
PflMI	CCANNNNNTGG	1 cut(s)	517
PfoI	TCCNGGA	1 cut(s)	570
PkrI	GCNGC	8 cut(s)	116, 212, 790, 1706, 1718, 1759, 1927, 2001
PleI	GAGTC	3 cut(s)	255, 1603, 1843
PpsI	GAGTC	3 cut(s)	255, 1603, 1843
PpuMI	RGGWCCY	1 cut(s)	807
Psp124BI	GAGCTC	2 cut(s)	582, 1054
Psp5II	RGGWCCY	1 cut(s)	807
Psp6I	CCWGG	6 cut(s)	570, 738, 850, 912, 1493, 1699
PspFI	CCCAGC	1 cut(s)	1618
PspGI	CCWGG	6 cut(s)	570, 738, 850, 912, 1493, 1699
PspN4I	GGNNCC	3 cut(s)	214, 565, 1893
PspPI	GGNCC	3 cut(s)	564, 807, 1852
PspPPI	RGGWCCY	1 cut(s)	807
PstI	CTGCAG	2 cut(s)	1843, 1927
PsuI	RGATCY	3 cut(s)	87, 1600, 1745
PvuII	CAGCTG	2 cut(s)	1739, 1928
RsaI	GTAC	2 cut(s)	528, 1416
RsaNI	GTAC	2 cut(s)	527, 1415
RseI	CAYNNNNRTG	1 cut(s)	620
SacI	GAGCTC	2 cut(s)	582, 1054
SapI	GCTCTTC	1 cut(s)	570
SaqAI	TTAA	3 cut(s)	720, 762, 1500
SatI	GCNGC	8 cut(s)	115, 211, 789, 1705, 1717, 1758, 1926, 2000
Sau96I	GGNCC	3 cut(s)	564, 807, 1852
ScaI	AGTACT	1 cut(s)	1416
SchI	GAGTC	3 cut(s)	256, 1603, 1844
ScrFI	CCNGG	6 cut(s)	572, 740, 852, 914, 1495, 1701
SduI	GDGCHC	4 cut(s)	60, 582, 1054, 1193
SfaNI	GCATC	5 cut(s)	427, 823, 1189, 1327, 1769
SfcI	CTRYAG	2 cut(s)	1839, 1923
SfiI	GGCCNNNNNGGCC	1 cut(s)	1701
Sfr274I	CTCGAG	1 cut(s)	1936
SinI	GGWCC	2 cut(s)	564, 807
SlaI	CTCGAG	1 cut(s)	1936
SmiMI	CAYNNNNRTG	1 cut(s)	620
SmlI	CTYRAG	7 cut(s)	260, 470, 761, 782, 1445, 1659, 1936
SmoI	CTYRAG	7 cut(s)	260, 470, 761, 782, 1445, 1659, 1936
SseBI	AGGCCT	1 cut(s)	1695
SsiI	CCGC	7 cut(s)	114, 210, 487, 694, 1705, 1716, 1757
SspI	AATATT	1 cut(s)	1059
SspMI	CTAG	4 cut(s)	464, 497, 1293, 1314
SstI	GAGCTC	2 cut(s)	582, 1054
StuI	AGGCCT	1 cut(s)	1695
StyD4I	CCNGG	6 cut(s)	570, 738, 850, 912, 1493, 1699
StyI	CCWWGG	1 cut(s)	118
TaaI	ACNGT	3 cut(s)	1218, 1586, 2032
TaiI	ACGT	2 cut(s)	57, 659
TaqI	TCGA	7 cut(s)	197, 323, 670, 1027, 1361, 1515, 1937
TatI	WGTACW	2 cut(s)	526, 1414
TauI	GCSGC	5 cut(s)	117, 213, 1707, 1719, 1760
TfiI	GAWTC	9 cut(s)	31, 974, 983, 1222, 1307, 1517, 1623, 1847, 2015
Tru1I	TTAA	3 cut(s)	720, 762, 1500
Tru9I	TTAA	3 cut(s)	720, 762, 1500
TscAI	CASTG	3 cut(s)	1633, 1921, 2035
TseFI	GTSAC	1 cut(s)	300
TseI	GCWGC	3 cut(s)	788, 1925, 1999
Tsp45I	GTSAC	1 cut(s)	300
TspDTI	ATGAA	9 cut(s)	248, 456, 491, 605, 654, 792, 1014, 1053, 1647
TspRI	CASTG	3 cut(s)	1633, 1921, 2035
Van91I	CCANNNNNTGG	1 cut(s)	517
Vha464I	CTTAAG	1 cut(s)	761
VneI	GTGCAC	1 cut(s)	56
VpaK11BI	GGWCC	2 cut(s)	564, 807
XagI	CCTNNNNNAGG	1 cut(s)	743
XapI	RAATTY	4 cut(s)	584, 884, 1945, 2021
XceI	RCATGY	1 cut(s)	433
XcmI	CCANNNNNNNNNTGG	1 cut(s)	365
XhoI	CTCGAG	1 cut(s)	1936
XmnI	GAANNNNTTC	2 cut(s)	846, 1023
XspI	CTAG	4 cut(s)	464, 497, 1293, 1314
ZrmI	AGTACT	1 cut(s)	1416
Zsp2I	ATGCAT	1 cut(s)	838

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.