Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0004087

Physical Location & Seq

Genomic Coordinates Reverse (-)

11002798 .. 11009777

Gene Structure 6980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g10180.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTGGAGCACGATTGCGAACCTGAAGGAGAATCTTAACAAGATGGCGCAGGACGTCCACGACGATGACGACGATGATGAAGTCTTCGCCCATTCCAAATCCCCCTCCCGCTCTCCGATCCCCAATGGCGTCGATTTTACTATTACTCCCGAGATTGAACAATACAAATCGGAGATTAAGAGGCTTCAGGAATCTGAGGCAGAAATAAAAGCATTATCAAAAAACTATGCAGCTCTGTTAAAGGAAAAAGAGGATCAAATATCCAGATTGAGTAAAGAAAATGGCTCATTGAAACAGAATCTGGACTCAACTACTGCATCTCTGAATGCAGCTAAAAATGAAAATCACAAAGCAGCTGCAAATGGAGTCAACGTGCTCAAGGGAAGTGGTAATCAGTCGCCCAACAGACAGCATAAAGTGACAAGTCCAGCAAAAATTGGATACTCTGGACATCAGAAACAGAATGGTGTTGTCTTTACACAAGACAGTACCAGCAATGGGATTTCACAGCTTTCAGATATGCAAGGGAGTGAAAGGGAGCTTGCAGATTTACTAGAAGAGAATAATAGGTCCCCGACAGCAGTGCTAGCTACTGCTGAGATGAAAAAATTGCGGATGGAACTTAAAAAAGAACGCAATCAGTCAGAAAAGATACATCAAAAGTTACAAGAACAACAGAAACTGAATGAAGCAATCCAGGAAGAGCTCAAATTTCTGAAGTTGGATAGAGAAAAGACCTCTGTTGAGATAAGCAAAATAAGCAGTGAGTTGAATGAGAAAATGTCTGAGATAAATCGACTGCAAATGGAGTTGAATAGAAGGGAGGATGAAAATGCAAATAATGGTGCAGAGAGTTTGAAAAGGTTAATTGCAACCCTGCAGAAGGAAAATAATAGTCTTAAGATGGAGAAAAATGAACTTGAGGGCGCTTTGAAAGTGAGCAGGGCCGCAAGTGAAATGCAGAAGGTGGAATCTTCAGAAAGTTTTCCTGGAAAGGAAGAAATGGAGAAATCATTACGAGAGTTTGATAAAAATTTGAAGGAAACACGTCTTGAAAGGGACAAAGCCTTGCAACAATTGTCACGCCTTAAACAGCATTTGTTGGAAAAGGAATCTGAAGAGTCTGAAAAAATGGATGAAGACAGCAAAATTATTGAGGAACTTCGAGAAAGTAACGAATATCGAAGAGCTCAAATTTTACATTTGGAGAAAGCTTTGAAGCAGGCAATTGCAAATCAGGACCAATTCAAGATGAGCAACAACAATGAAATTCAGAAATCAAAGGAAGTTATTGCTGATCTGAATAAAAGACTTGAAAGCTGCATGAGCACAATAGATGCCAAAAATGTTGAACTCTTGAATCTTCAAACTGCTCTTGGTCAGTACTATGCTGAAATTGAAGCTAAGGAACATTTGGAAGGAGATTTGTCACAGGCAAGAGAAGAGTCAGCTAAGCTTTCTCGGCTCTTGAAAGAAGCGGATCATCAGGCAGAAGCATCAAAGAAGGAAAAGGAAGAAATTTTGTGCAAGCTTTCACAAGCTGAAAAAATAGTAGTAGATCGGAAAAGCAGAGTAAATAAACTTGAGGAAGACAACGCAAAATTACGCCTAGCTGTTGAGCAGAGCATGACCAGGCTTAATAGGATGTCAGTAGATTCAGATTATCTTGTTGACAGACGCATTGTGATCAAGTTACTGGTGACCTACTTCCAGAGAAACCACAGTAAAGAGGTTCTGGATCTTATGCCTCGCATGCTGGGATTCTCTGATGAAGACAAGCAGAGAATAGGCGTCTCTCAAGGTGCAGGCAAAGGTGTTGTTCGTGGAGTTTTCTCTCTACCTGGTCGCCTTGTTGGTGGAATTTTGGGAGGTGGTTCAGCTGGATTATCTGCAAATGCAGCAGCTGATAACCAGTCCTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAAGAAACTGTAGAAAGGGAGAGACGGGAGTTGGCCGATGATTCAGGCAGATCTCAAGAAGATTCATATAGAACTCCAACCAAATCGCATACCGGTCCATCAAATACTGACCACAGAACAACTAGTGGGGCTGAGCCTGGTTTCTCAAGAACAAATTTATCACCAATCCAAAACACAAGCCCCTCTCCTTTTCGAAGTAATTTTCGGTTGGAGCACTCTGATTCGGAATTCTCAACGGTTCCTCTCACATCGTCAGAAAGCAATCCGTACGCCTCAAGAATGCTTCCGAGATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

748

Amino Acids

84.41

Weight (kDa)

5.85

Isoelectric Point (pI)

53.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46180 AT3G61570 AT3G61570
fragaria_vesca	FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532
malus_domestica	MD01G1072600.v1.1 MD07G1130300.v1.1
prunus_persica	Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1
pyrus_communis	pycom01g10180 pycom07g12720
rosa_chinensis	RchiOBHm_Chr1g0357861
rosa_laevigata	RLG00000027990
rosa_multiflora	Rmu_sc0007456.1_g000001 Rmu_sc0007456.1_g000005
rosa_roxburghii	Rroxscaffold_4G00298400 Rroxscaffold_4G00298440 Rroxscaffold_7G00215440
rosa_rugosa	Rorug01G0259100 Rorug01G0259200
rosa_samantha	Rh1AG273100 Rh1BG240400 Rh1CG256900 Rh1DG268700 Rh3AG149000 Rh3BG172200 Rh4AG248000 Rh5AG428400
rosa_wichuraiana	Rw1G024390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	57
AccBSI	CCGCTC	1 cut(s)	111
AciI	CCGC	4 cut(s)	109, 613, 948, 1478
AclWI	GGATC	4 cut(s)	112, 261, 1488, 1746
AcoI	YGGCCR	1 cut(s)	1980
AcsI	RAATTY	8 cut(s)	710, 1033, 1194, 1269, 1518, 1860, 2101, 2174
AcuI	CTGAAG	5 cut(s)	44, 170, 737, 960, 1137
AcyI	GRCGYC	3 cut(s)	54, 129, 1791
AfaI	GTAC	3 cut(s)	490, 1385, 2216
AfiI	CCNNNNNNNGG	2 cut(s)	498, 883
AflII	CTTAAG	1 cut(s)	899
AflIII	ACRYGT	1 cut(s)	1046
AgeI	ACCGGT	1 cut(s)	2039
AhlI	ACTAGT	1 cut(s)	2069
AjiI	CACGTC	1 cut(s)	1049
AjnI	CCWGG	5 cut(s)	696, 988, 1631, 1840, 2083
Alw21I	GWGCWC	6 cut(s)	11, 378, 708, 1192, 1331, 2163
Alw26I	GTCTC	2 cut(s)	1798, 1963
AlwI	GGATC	4 cut(s)	112, 261, 1488, 1746
AlwNI	CAGNNNCTG	3 cut(s)	301, 682, 1904
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	2 cut(s)	945, 1980
ApeKI	GCWGC	7 cut(s)	230, 329, 353, 356, 1320, 1898, 1901
ApoI	RAATTY	8 cut(s)	710, 1033, 1194, 1269, 1518, 1860, 2101, 2174
AsiGI	ACCGGT	1 cut(s)	2039
Asp700I	GAANNNNTTC	1 cut(s)	984
AspLEI	GCGC	2 cut(s)	49, 929
AspS9I	GGNCC	4 cut(s)	570, 945, 1240, 2042
AsuHPI	GGTGA	2 cut(s)	1711, 2100
AsuII	TTCGAA	1 cut(s)	2140
AsuNHI	GCTAGC	1 cut(s)	586
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	3 cut(s)	570, 1240, 2042
BanII	GRGCYC	2 cut(s)	708, 1192
BbsI	GAAGAC	4 cut(s)	76, 1146, 1596, 1779
Bbv12I	GWGCWC	6 cut(s)	11, 378, 708, 1192, 1331, 2163
BbvI	GCAGC	7 cut(s)	242, 341, 343, 365, 1307, 1910, 1913
BccI	CCATC	4 cut(s)	37, 610, 898, 2053
BcgI	CGANNNNNNTGC	2 cut(s)	565, 599
BciT130I	CCWGG	5 cut(s)	698, 990, 1633, 1842, 2085
BciVI	GTATCC	1 cut(s)	434
BclI	TGATCA	1 cut(s)	1686
BcoDI	GTCTC	2 cut(s)	1798, 1963
BcuI	ACTAGT	1 cut(s)	2069
BfaI	CTAG	4 cut(s)	554, 587, 1610, 2070
BfmI	CTRYAG	2 cut(s)	878, 1956
BfoI	RGCGCY	1 cut(s)	930
BfrI	CTTAAG	1 cut(s)	899
BfuI	GTATCC	1 cut(s)	434
BglII	AGATCT	2 cut(s)	1924, 1997
BisI	GCNGC	8 cut(s)	231, 330, 354, 357, 948, 1321, 1899, 1902
BlpI	GCTNAGC	2 cut(s)	1452, 2079
BlsI	GCNGC	8 cut(s)	232, 331, 355, 358, 949, 1322, 1900, 1903
BmcAI	AGTACT	1 cut(s)	1385
Bme1390I	CCNGG	5 cut(s)	698, 990, 1633, 1842, 2085
Bme18I	GGWCC	3 cut(s)	570, 1240, 2042
BmeT110I	CYCGRG	1 cut(s)	149
BmgBI	CACGTC	1 cut(s)	1049
BmgT120I	GGNCC	4 cut(s)	570, 945, 1240, 2042
BmiI	GGNNCC	2 cut(s)	572, 2187
BmrFI	CCNGG	5 cut(s)	698, 990, 1633, 1842, 2085
BmsI	GCATC	3 cut(s)	326, 1327, 1505
BmtI	GCTAGC	1 cut(s)	590
BpiI	GAAGAC	4 cut(s)	76, 1146, 1596, 1779
Bpu10I	CCTNAGC	1 cut(s)	1404
Bpu1102I	GCTNAGC	2 cut(s)	1452, 2079
Bpu14I	TTCGAA	1 cut(s)	2140
BpuEI	CTTGAG	7 cut(s)	362, 941, 1604, 1782, 1986, 2077, 2206
BsaHI	GRCGYC	3 cut(s)	54, 129, 1791
BsaWI	WCCGGW	1 cut(s)	2039
BsaXI	ACNNNNNCTCC	4 cut(s)	130, 160, 357, 387
Bsc4I	CCNNNNNNNGG	2 cut(s)	498, 883
Bse118I	RCCGGY	1 cut(s)	2039
Bse1I	ACTGG	2 cut(s)	1701, 1912
Bse3DI	GCAATG	1 cut(s)	502
BseBI	CCWGG	5 cut(s)	698, 990, 1633, 1842, 2085
BseGI	GGATG	4 cut(s)	621, 832, 1141, 1650
BseLI	CCNNNNNNNGG	2 cut(s)	498, 883
BseMI	GCAATG	1 cut(s)	502
BseMII	CTCAG	4 cut(s)	186, 588, 777, 2070
BseNI	ACTGG	2 cut(s)	1701, 1912
BseXI	GCAGC	7 cut(s)	242, 341, 343, 365, 1307, 1910, 1913
BseYI	CCCAGC	1 cut(s)	1756
BsgI	GTGCAG	2 cut(s)	867, 1824
BshFI	GGCC	2 cut(s)	947, 1982
BshTI	ACCGGT	1 cut(s)	2039
BsiHKAI	GWGCWC	6 cut(s)	11, 378, 708, 1192, 1331, 2163
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	1 cut(s)	2040
BsiWI	CGTACG	1 cut(s)	2214
BslFI	GGGAC	2 cut(s)	556, 1073
BslI	CCNNNNNNNGG	2 cut(s)	498, 883
BsmAI	GTCTC	2 cut(s)	1798, 1963
BsmBI	CGTCTC	2 cut(s)	1798, 1963
BsmFI	GGGAC	2 cut(s)	556, 1073
BsmI	GAATGC	2 cut(s)	331, 2232
BsnI	GGCC	2 cut(s)	947, 1982
BsoBI	CYCGRG	1 cut(s)	149
Bsp119I	TTCGAA	1 cut(s)	2140
Bsp1286I	GDGCHC	6 cut(s)	11, 378, 708, 1192, 1331, 2163
Bsp143I	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
Bsp1720I	GCTNAGC	2 cut(s)	1452, 2079
BspACI	CCGC	4 cut(s)	109, 613, 948, 1478
BspANI	GGCC	2 cut(s)	947, 1982
BspCNI	CTCAG	4 cut(s)	187, 589, 778, 2071
BspLI	GGNNCC	2 cut(s)	572, 2187
BspMAI	CTGCAG	1 cut(s)	882
BspOI	GCTAGC	1 cut(s)	590
BspPI	GGATC	4 cut(s)	112, 261, 1488, 1746
BspQI	GCTCTTC	2 cut(s)	696, 1180
BspT104I	TTCGAA	1 cut(s)	2140
BspTI	CTTAAG	1 cut(s)	899
BsrBI	CCGCTC	1 cut(s)	111
BsrDI	GCAATG	1 cut(s)	502
BsrFI	RCCGGY	1 cut(s)	2039
BsrI	ACTGG	2 cut(s)	1701, 1912
BssAI	RCCGGY	1 cut(s)	2039
BssMI	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
BssNI	GRCGYC	3 cut(s)	54, 129, 1791
Bst2UI	CCWGG	5 cut(s)	698, 990, 1633, 1842, 2085
Bst4CI	ACNGT	4 cut(s)	488, 1724, 1957, 2185
Bst6I	CTCTTC	5 cut(s)	552, 696, 1113, 1180, 1437
BstACI	GRCGYC	3 cut(s)	54, 129, 1791
BstAFI	CTTAAG	1 cut(s)	899
BstBI	TTCGAA	1 cut(s)	2140
BstC8I	GCNNGC	6 cut(s)	543, 588, 1224, 1529, 1754, 1807
BstDEI	CTNAG	6 cut(s)	195, 597, 786, 1404, 1452, 2079
BstEII	GGTNACC	1 cut(s)	1699
BstENI	CCTNNNNNAGG	1 cut(s)	881
BstF5I	GGATG	4 cut(s)	621, 832, 1141, 1650
BstH2I	RGCGCY	1 cut(s)	930
BstHHI	GCGC	2 cut(s)	49, 929
BstKTI	GATC	9 cut(s)	120, 256, 1300, 1483, 1561, 1689, 1741, 1927, 2000
BstMAI	GTCTC	2 cut(s)	1798, 1963
BstMBI	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
BstMWI	GCNNNNNNNGC	6 cut(s)	587, 759, 1326, 1462, 1753, 1898
BstNI	CCWGG	5 cut(s)	698, 990, 1633, 1842, 2085
BstNSI	RCATGY	1 cut(s)	1756
BstPI	GGTNACC	1 cut(s)	1699
BstSCI	CCNGG	5 cut(s)	696, 988, 1631, 1840, 2083
BstSFI	CTRYAG	2 cut(s)	878, 1956
BstV1I	GCAGC	7 cut(s)	242, 341, 343, 365, 1307, 1910, 1913
BstV2I	GAAGAC	4 cut(s)	76, 1146, 1596, 1779
BstX2I	RGATCY	3 cut(s)	1738, 1924, 1997
BstYI	RGATCY	3 cut(s)	1738, 1924, 1997
BsuI	GTATCC	1 cut(s)	434
BsuRI	GGCC	2 cut(s)	947, 1982
BtrI	CACGTC	1 cut(s)	1049
BtsCI	GGATG	4 cut(s)	621, 832, 1141, 1650
BtsI	GCAGTG	2 cut(s)	588, 769
BtsIMutI	CAGTG	2 cut(s)	588, 769
Cac8I	GCNNGC	6 cut(s)	543, 588, 1224, 1529, 1754, 1807
CaiI	CAGNNNCTG	3 cut(s)	301, 682, 1904
CfoI	GCGC	2 cut(s)	49, 929
Cfr10I	RCCGGY	1 cut(s)	2039
Cfr13I	GGNCC	4 cut(s)	570, 945, 1240, 2042
CseI	GACGC	3 cut(s)	118, 1686, 1780
CsiI	ACCWGGT	1 cut(s)	1840
Csp6I	GTAC	3 cut(s)	489, 1384, 2215
CspAI	ACCGGT	1 cut(s)	2039
CspCI	CAANNNNNGTGG	2 cut(s)	367, 402
CviAII	CATG	3 cut(s)	1324, 1627, 1753
CviQI	GTAC	3 cut(s)	489, 1384, 2215
DdeI	CTNAG	6 cut(s)	195, 597, 786, 1404, 1452, 2079
DpnI	GATC	9 cut(s)	119, 255, 1299, 1482, 1560, 1688, 1740, 1926, 1999
DpnII	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
EaeI	YGGCCR	1 cut(s)	1980
Eam1104I	CTCTTC	5 cut(s)	552, 696, 1113, 1180, 1437
EarI	CTCTTC	5 cut(s)	552, 696, 1113, 1180, 1437
Ecl136II	GAGCTC	2 cut(s)	706, 1190
Eco24I	GRGCYC	2 cut(s)	708, 1192
Eco47I	GGWCC	3 cut(s)	570, 1240, 2042
Eco53kI	GAGCTC	2 cut(s)	706, 1190
Eco57I	CTGAAG	5 cut(s)	44, 170, 737, 960, 1137
Eco88I	CYCGRG	1 cut(s)	149
Eco91I	GGTNACC	1 cut(s)	1699
EcoICRI	GAGCTC	2 cut(s)	706, 1190
EcoNI	CCTNNNNNAGG	1 cut(s)	881
EcoO109I	RGGNCCY	1 cut(s)	570
EcoO65I	GGTNACC	1 cut(s)	1699
EcoRI	GAATTC	1 cut(s)	2174
EcoRII	CCWGG	5 cut(s)	696, 988, 1631, 1840, 2083
EcoT38I	GRGCYC	2 cut(s)	708, 1192
Esp3I	CGTCTC	2 cut(s)	1798, 1963
FaeI	CATG	3 cut(s)	1327, 1630, 1756
FaqI	GGGAC	2 cut(s)	556, 1073
FatI	CATG	3 cut(s)	1323, 1626, 1752
FauI	CCCGC	1 cut(s)	116
FbaI	TGATCA	1 cut(s)	1686
Fnu4HI	GCNGC	8 cut(s)	231, 330, 354, 357, 948, 1321, 1899, 1902
FokI	GGATG	4 cut(s)	628, 839, 1148, 1657
FriOI	GRGCYC	2 cut(s)	708, 1192
Fsp4HI	GCNGC	8 cut(s)	231, 330, 354, 357, 948, 1321, 1899, 1902
FspBI	CTAG	4 cut(s)	554, 587, 1610, 2070
GlaI	GCGC	2 cut(s)	48, 928
GluI	GCNGC	8 cut(s)	231, 330, 354, 357, 948, 1321, 1899, 1902
GsaI	CCCAGC	1 cut(s)	1760
HaeII	RGCGCY	1 cut(s)	930
HaeIII	GGCC	2 cut(s)	947, 1982
HapII	CCGG	1 cut(s)	2040
HgaI	GACGC	3 cut(s)	118, 1686, 1780
HhaI	GCGC	2 cut(s)	49, 929
Hin1I	GRCGYC	3 cut(s)	54, 129, 1791
Hin1II	CATG	3 cut(s)	1327, 1630, 1756
Hin6I	GCGC	2 cut(s)	47, 927
HinP1I	GCGC	2 cut(s)	47, 927
HincII	GTYRAC	2 cut(s)	370, 1672
HindII	GTYRAC	2 cut(s)	370, 1672
HindIII	AAGCTT	3 cut(s)	1212, 1454, 1529
HpaII	CCGG	1 cut(s)	2040
HphI	GGTGA	2 cut(s)	1711, 2100
Hpy166II	GTNNAC	3 cut(s)	58, 370, 1672
Hpy8I	GTNNAC	3 cut(s)	58, 370, 1672
Hpy99I	CGWCG	3 cut(s)	65, 74, 134
HpyAV	CCTTC	7 cut(s)	19, 813, 877, 958, 1033, 1412, 1498
HpyCH4III	ACNGT	4 cut(s)	488, 1724, 1957, 2185
HpyCH4IV	ACGT	3 cut(s)	54, 372, 1048
HpyF10VI	GCNNNNNNNGC	6 cut(s)	587, 759, 1326, 1462, 1753, 1898
HpyF3I	CTNAG	6 cut(s)	195, 597, 786, 1404, 1452, 2079
HpySE526I	ACGT	3 cut(s)	54, 372, 1048
Hsp92I	GRCGYC	3 cut(s)	54, 129, 1791
Hsp92II	CATG	3 cut(s)	1327, 1630, 1756
HspAI	GCGC	2 cut(s)	47, 927
Ksp22I	TGATCA	1 cut(s)	1686
Kzo9I	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
LguI	GCTCTTC	2 cut(s)	696, 1180
LmnI	GCTCC	3 cut(s)	6, 538, 2158
Lsp1109I	GCAGC	7 cut(s)	242, 341, 343, 365, 1307, 1910, 1913
LweI	GCATC	3 cut(s)	326, 1327, 1505
MabI	ACCWGGT	1 cut(s)	1840
MaeI	CTAG	4 cut(s)	554, 587, 1610, 2070
MaeII	ACGT	3 cut(s)	54, 372, 1048
MaeIII	GTNAC	7 cut(s)	418, 663, 1080, 1172, 1428, 1692, 1699
MalI	GATC	9 cut(s)	119, 255, 1299, 1482, 1560, 1688, 1740, 1926, 1999
MbiI	CCGCTC	1 cut(s)	111
MboI	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
MfeI	CAATTG	2 cut(s)	1076, 1227
MflI	RGATCY	3 cut(s)	1738, 1924, 1997
MhlI	GDGCHC	6 cut(s)	11, 378, 708, 1192, 1331, 2163
MlyI	GAGTC	4 cut(s)	299, 375, 1130, 1454
MmeI	TCCRAC	4 cut(s)	702, 1083, 2048, 2136
MroXI	GAANNNNTTC	1 cut(s)	984
MseI	TTAA	8 cut(s)	36, 177, 239, 624, 866, 900, 1089, 1638
MslI	CAYNNNNRTG	1 cut(s)	63
MspA1I	CMGCKG	3 cut(s)	356, 1880, 1904
MspCI	CTTAAG	1 cut(s)	899
MspI	CCGG	1 cut(s)	2040
MspR9I	CCNGG	5 cut(s)	698, 990, 1633, 1842, 2085
MunI	CAATTG	2 cut(s)	1076, 1227
Mva1269I	GAATGC	2 cut(s)	331, 2232
MvaI	CCWGG	5 cut(s)	698, 990, 1633, 1842, 2085
MwoI	GCNNNNNNNGC	6 cut(s)	587, 759, 1326, 1462, 1753, 1898
NdeII	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
NheI	GCTAGC	1 cut(s)	586
NlaIII	CATG	3 cut(s)	1327, 1630, 1756
NlaIV	GGNNCC	2 cut(s)	572, 2187
NmeAIII	GCCGAG	1 cut(s)	1441
NmuCI	GTSAC	4 cut(s)	418, 1080, 1428, 1699
NspI	RCATGY	1 cut(s)	1756
NspV	TTCGAA	1 cut(s)	2140
PaeI	GCATGC	1 cut(s)	1756
PciSI	GCTCTTC	2 cut(s)	696, 1180
PcsI	WCGNNNNNNNCGW	3 cut(s)	60, 66, 69
PctI	GAATGC	2 cut(s)	331, 2232
PdmI	GAANNNNTTC	1 cut(s)	984
Pfl23II	CGTACG	1 cut(s)	2214
PfoI	TCCNGGA	2 cut(s)	696, 988
PinAI	ACCGGT	1 cut(s)	2039
PkrI	GCNGC	8 cut(s)	232, 331, 355, 358, 949, 1322, 1900, 1903
PleI	GAGTC	4 cut(s)	299, 374, 1129, 1453
PpsI	GAGTC	4 cut(s)	299, 374, 1129, 1453
PpuMI	RGGWCCY	1 cut(s)	570
Psp124BI	GAGCTC	2 cut(s)	708, 1192
Psp5II	RGGWCCY	1 cut(s)	570
Psp6I	CCWGG	5 cut(s)	696, 988, 1631, 1840, 2083
PspEI	GGTNACC	1 cut(s)	1699
PspFI	CCCAGC	1 cut(s)	1756
PspGI	CCWGG	5 cut(s)	696, 988, 1631, 1840, 2083
PspLI	CGTACG	1 cut(s)	2214
PspN4I	GGNNCC	2 cut(s)	572, 2187
PspPI	GGNCC	4 cut(s)	570, 945, 1240, 2042
PspPPI	RGGWCCY	1 cut(s)	570
PstI	CTGCAG	1 cut(s)	882
PstNI	CAGNNNCTG	3 cut(s)	301, 682, 1904
PsuI	RGATCY	3 cut(s)	1738, 1924, 1997
PvuII	CAGCTG	3 cut(s)	356, 1880, 1904
RsaI	GTAC	3 cut(s)	490, 1385, 2216
RsaNI	GTAC	3 cut(s)	489, 1384, 2215
RseI	CAYNNNNRTG	1 cut(s)	63
SacI	GAGCTC	2 cut(s)	708, 1192
SapI	GCTCTTC	2 cut(s)	696, 1180
SaqAI	TTAA	8 cut(s)	36, 177, 239, 624, 866, 900, 1089, 1638
SatI	GCNGC	8 cut(s)	231, 330, 354, 357, 948, 1321, 1899, 1902
Sau3AI	GATC	9 cut(s)	117, 253, 1297, 1480, 1558, 1686, 1738, 1924, 1997
Sau96I	GGNCC	4 cut(s)	570, 945, 1240, 2042
ScaI	AGTACT	1 cut(s)	1385
SchI	GAGTC	4 cut(s)	299, 375, 1130, 1454
ScrFI	CCNGG	5 cut(s)	698, 990, 1633, 1842, 2085
SduI	GDGCHC	6 cut(s)	11, 378, 708, 1192, 1331, 2163
SexAI	ACCWGGT	1 cut(s)	1840
SfaNI	GCATC	3 cut(s)	326, 1327, 1505
SfcI	CTRYAG	2 cut(s)	878, 1956
SfuI	TTCGAA	1 cut(s)	2140
SinI	GGWCC	3 cut(s)	570, 1240, 2042
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	8 cut(s)	377, 899, 920, 1583, 1797, 2001, 2092, 2221
SmoI	CTYRAG	8 cut(s)	377, 899, 920, 1583, 1797, 2001, 2092, 2221
SpeI	ACTAGT	1 cut(s)	2069
SphI	GCATGC	1 cut(s)	1756
SsiI	CCGC	4 cut(s)	109, 613, 948, 1478
SspMI	CTAG	4 cut(s)	554, 587, 1610, 2070
SstI	GAGCTC	2 cut(s)	708, 1192
StyD4I	CCNGG	5 cut(s)	696, 988, 1631, 1840, 2083
TaaI	ACNGT	4 cut(s)	488, 1724, 1957, 2185
TaiI	ACGT	3 cut(s)	57, 375, 1051
TaqI	TCGA	5 cut(s)	132, 796, 1165, 1183, 2140
TatI	WGTACW	1 cut(s)	1383
TauI	GCSGC	1 cut(s)	950
Tru1I	TTAA	8 cut(s)	36, 177, 239, 624, 866, 900, 1089, 1638
Tru9I	TTAA	8 cut(s)	36, 177, 239, 624, 866, 900, 1089, 1638
TscAI	CASTG	2 cut(s)	588, 769
TseFI	GTSAC	4 cut(s)	418, 1080, 1428, 1699
TseI	GCWGC	7 cut(s)	230, 329, 353, 356, 1320, 1898, 1901
Tsp45I	GTSAC	4 cut(s)	418, 1080, 1428, 1699
TspGWI	ACGGA	1 cut(s)	2202
TspRI	CASTG	2 cut(s)	588, 769
Vha464I	CTTAAG	1 cut(s)	899
VpaK11BI	GGWCC	3 cut(s)	570, 1240, 2042
XagI	CCTNNNNNAGG	1 cut(s)	881
XapI	RAATTY	8 cut(s)	710, 1033, 1194, 1269, 1518, 1860, 2101, 2174
XceI	RCATGY	1 cut(s)	1756
XmnI	GAANNNNTTC	1 cut(s)	984
XspI	CTAG	4 cut(s)	554, 587, 1610, 2070
ZraI	GACGTC	1 cut(s)	55
ZrmI	AGTACT	1 cut(s)	1385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.