Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0004087

Physical Location & Seq

Genomic Coordinates Reverse (-)

52103971 .. 52109895

Gene Structure 5925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG256900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGATGTGGGGGACGATTGCCAACCTCAAAGAGAATCTCAACAAGATCGCGCAGGACGTGCACGACGACAGCGACGAAGAGGAGTTTGAGATCTACGCCTCAACCAATGGAGGAGGCGGCCAAGGTTCGTCCATTTCTGATCGGAGAAACTCCCACAGCTTCGCGCATTCCAAGTCGCCGTCGTCGCGCTCGCCGGTGTCGAATGGCGTCGGCGGCTCCGGTGTTAGTCCAGAGATTGAACAATACCGAGCTGAAATTAAGAGACTTCAGGAATCTGAGGCAGAAATTAAAGCATTATCAAAAAACTATGCAGCTTTGTTAAAGGAAAAGGAGGATCAAATTTCTAGATTGAATAAAGAAAATGGCTCATTGAAACAAAATCTGGACACAACTACTGCATCTCTAAATGCCTCTAGAATTGAAAACTACAAAGCGGCAGCAAATGGGACCAACTTGCACAAGGGAAGTAGTAATCAGTCACCCAACCGACAGCAAAGATCGACAGGTCAAGCAAAAACCAGCTATTCTGGACACCAGAAACAGAATGGTATTGTCTATACACAGGATGGGAATGGGATAAGCAATGGGATTGCGCATCTTTCAGATATGCAGGGGAATGAAAGGGAGCTTGCAGATTTACTAGGACTTGAGATGAAGCAATTGCGGATGGAGCTAGAAAAAGAACACAACCAGTTGGAAAATGTACAGAGAAAGTTACAAGAGGAGCAGAAATTGAATGGGACCATCCAGGAAGAGCTCAAATTTATTAAGTTGGATAGAGAAAAAACCTCCATTGAGATGAGCAAAATACACAATGAATTGAATGACAAAACGTCTGAGATAAGTCGATTGCAAATGGAATTGAATAGGCGGGAGGATGTAAATGCAGAGAACTTTAAAAGATTGATCGCAACCCTGGAGAAGGAAAACAATAGTCTTAAGATGGAGAAGAATGAACTTGAGGCAGCTTTGAGAACGAGCAGGACCTCAACTGATAAAAAACCCTTAGATGCATCAGAAAGTTTTCCTGGGAAGGAAGAAATGGAGCTATCTTTGCGAAAATTTGATAGTGATTTGAAGGTAGCACGCCAGGAAAGGGACAAAGCCTTGCAAGAATTGAAACGCCTCAAACAGCATTTATTAGAAAAGGAATCTGAAGAATCAGAGAAAATGGATGAAGACAGCAAAATCATTGAAGAACTTCGACAAGCTAATGAACATCTAAGAGCTCAAATATTACATTTGGAGAAAGCTCTGAAGAAGGCAATTGCAAGTCAGGAGGATGTCAAGATGATCAACAACAATGAACTTCAGAAATCAAAGGAACTTATTGATGATCTGAATAAAAGACTTTCAAGTTGTATGAGCACAATAGATGCCAAAAATGTTGAACTGTTGAATCTGCAAACTGCTCTTGGTCAATACTATGCAGAAATTGAAGCGAAGGAACATTTGGAAGGAGATTTGGCTAGGGCAAGAGAGGAATCAGCTAGGCTTTCTCGTCTCTTGAAAGATGCAGATCATCAGGCTGAGGCATCAAAGGCCGAAAAGGAAGAAATTGTGTCCAAGCTTTCACAAGCTGAAAAGATAGTACTGGATTGGAAAAGCAGAGTGAATAAACTTGAGGAAGATAATGCAAAACTACGGCGAGCTGTTGAGCAGAGTATGACCAGGCTTAATAGGATGTCAATAGATTCAGACTTTCTTGTTGACAGGCGCATTGTGATCAAGTTACTGGTAACATACTTTCAGAAAAACCACAGTAAAGAGGTTTTGGATCTTATGACTCGTATGCTGGGATTCACTGATGAAGACAAGCAGAGAATAGGCGTTGCTCAAGGTGGCAAAGGTGTTGTTCGTGGTGTTTTAGGCCTGCCTGGCCGCCTTGTTGGCGGCATTTTGGGAGGCAGTTCAGCTGGAGGATCTGCAAATGCGGCATCTGAGAACCATTCCTTCGCAGATTTGTGGGTTGATTTTCTTCTCAAAGAAACTGAAGAAAGAGAGAGAAGGGAGTCTGCAGATGATTCGGGCCAGTCTCAGGAAGATACATATAAAAGAAATCCATTGGAACCTGACCATAAGCCATCCACCACTGGTTCTGCAGCTGACTTCTCGAGAACAAATTTATCTCCAATCCAGAACTCAAATCTTCCACCTTTCCGGAATAATTTTCGGCAGCCAGAACATTCTGATTCTGAATTTTCCACTGTTCCTCTCACATCGTCAGAGAACAATCCTTATGCCCCAAGACAGCTTCCAAGATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

755

Amino Acids

85.17

Weight (kDa)

5.78

Isoelectric Point (pI)

53.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46180 AT3G61570 AT3G61570
fragaria_vesca	FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532 FvH4_7g15532
malus_domestica	MD01G1072600.v1.1 MD07G1130300.v1.1
prunus_persica	Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1 Prupe.2G178900_v2.0.a1
pyrus_communis	pycom01g10180 pycom07g12720
rosa_chinensis	RchiOBHm_Chr1g0357861
rosa_laevigata	RLG00000027990
rosa_multiflora	Rmu_sc0007456.1_g000001 Rmu_sc0007456.1_g000005
rosa_roxburghii	Rroxscaffold_4G00298400 Rroxscaffold_4G00298440 Rroxscaffold_7G00215440
rosa_rugosa	Rorug01G0259100 Rorug01G0259200
rosa_samantha	Rh1AG273100 Rh1BG240400 Rh1CG256900 Rh1DG268700 Rh3AG149000 Rh3BG172200 Rh4AG248000 Rh5AG428400
rosa_wichuraiana	Rw1G024390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	594
AccII	CGCG	3 cut(s)	50, 164, 187
AccIII	TCCGGA	1 cut(s)	2160
AciI	CCGC	8 cut(s)	117, 213, 434, 664, 871, 1882, 1893, 1934
AclWI	GGATC	3 cut(s)	342, 1785, 1930
AcoI	YGGCCR	2 cut(s)	118, 1879
AcsI	RAATTY	5 cut(s)	339, 761, 1061, 2122, 2198
AcuI	CTGAAG	5 cut(s)	251, 1176, 1277, 1295, 2013
AcyI	GRCGYC	1 cut(s)	207
AfaI	GTAC	2 cut(s)	705, 1593
AfiI	CCNNNNNNNGG	3 cut(s)	922, 1096, 2038
AflII	CTTAAG	1 cut(s)	938
AhdI	GACNNNNNGTC	1 cut(s)	832
AjiI	CACGTC	1 cut(s)	58
AjnI	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1670, 1876
AjuI	GAANNNNNNNTTGG	2 cut(s)	1436, 1468
Alw21I	GWGCWC	4 cut(s)	63, 759, 1231, 1370
Alw26I	GTCTC	3 cut(s)	256, 1508, 2040
Alw44I	GTGCAC	1 cut(s)	59
AlwI	GGATC	3 cut(s)	342, 1785, 1930
Ama87I	CYCGRG	1 cut(s)	2113
Aor13HI	TCCGGA	1 cut(s)	2160
AoxI	GGCC	5 cut(s)	118, 1542, 1870, 1879, 2029
ApaLI	GTGCAC	1 cut(s)	59
ApeKI	GCWGC	5 cut(s)	311, 437, 965, 2102, 2176
ApoI	RAATTY	5 cut(s)	339, 761, 1061, 2122, 2198
Asp700I	GAANNNNTTC	2 cut(s)	1023, 1200
AspLEI	GCGC	5 cut(s)	52, 166, 189, 595, 1719
AspS9I	GGNCC	4 cut(s)	447, 741, 984, 2029
AsuHPI	GGTGA	1 cut(s)	471
AvaI	CYCGRG	1 cut(s)	2113
AvaII	GGWCC	3 cut(s)	447, 741, 984
BaeGI	GKGCMC	1 cut(s)	63
BanII	GRGCYC	2 cut(s)	759, 1231
BbsI	GAAGAC	2 cut(s)	1185, 1818
Bbv12I	GWGCWC	4 cut(s)	63, 759, 1231, 1370
BbvCI	CCTCAGC	1 cut(s)	1530
BbvI	GCAGC	5 cut(s)	323, 449, 977, 2114, 2188
BccI	CCATC	5 cut(s)	560, 661, 752, 937, 2092
BceAI	ACGGC	2 cut(s)	163, 1661
BcgI	CGANNNNNNTGC	2 cut(s)	2007, 2041
BciT130I	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
BclI	TGATCA	2 cut(s)	1293, 1725
BcoDI	GTCTC	3 cut(s)	256, 1508, 2040
BfaI	CTAG	6 cut(s)	345, 414, 641, 674, 1470, 1491
BfmI	CTRYAG	2 cut(s)	2016, 2100
BfrI	CTTAAG	1 cut(s)	938
BglI	GCCNNNNNGGC	2 cut(s)	1878, 1890
BglII	AGATCT	1 cut(s)	90
BmcAI	AGTACT	1 cut(s)	1593
Bme1390I	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
Bme18I	GGWCC	3 cut(s)	447, 741, 984
BmeRI	GACNNNNNGTC	1 cut(s)	832
BmeT110I	CYCGRG	1 cut(s)	2113
BmgBI	CACGTC	1 cut(s)	58
BmgT120I	GGNCC	4 cut(s)	447, 741, 984, 2029
BmiI	GGNNCC	4 cut(s)	217, 448, 742, 2070
BmrFI	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
BmsI	GCATC	8 cut(s)	407, 604, 1000, 1022, 1366, 1504, 1544, 1946
BpiI	GAAGAC	2 cut(s)	1185, 1818
BpmI	CTGGAG	2 cut(s)	938, 1938
Bpu10I	CCTNAGC	1 cut(s)	1530
BpuEI	CTTGAG	4 cut(s)	668, 980, 1643, 1821
BsaBI	GATNNNNATC	1 cut(s)	1518
BsaHI	GRCGYC	1 cut(s)	207
BsaJI	CCNNGG	3 cut(s)	121, 915, 1028
BsaWI	WCCGGW	2 cut(s)	218, 2160
Bsc4I	CCNNNNNNNGG	3 cut(s)	922, 1096, 2038
Bse118I	RCCGGY	1 cut(s)	193
Bse1I	ACTGG	5 cut(s)	691, 1599, 1740, 2032, 2098
Bse3DI	GCAATG	1 cut(s)	589
Bse8I	GATNNNNATC	1 cut(s)	1518
BseAI	TCCGGA	1 cut(s)	2160
BseBI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
BseDI	CCNNGG	3 cut(s)	121, 915, 1028
BseGI	GGATG	8 cut(s)	571, 672, 744, 883, 1180, 1288, 1689, 2084
BseJI	GATNNNNATC	1 cut(s)	1518
BseLI	CCNNNNNNNGG	3 cut(s)	922, 1096, 2038
BseMI	GCAATG	1 cut(s)	589
BseMII	CTCAG	5 cut(s)	267, 828, 1521, 1932, 2051
BseNI	ACTGG	5 cut(s)	691, 1599, 1740, 2032, 2098
BseRI	GAGGAG	3 cut(s)	95, 126, 737
BseSI	GKGCMC	1 cut(s)	63
BseXI	GCAGC	5 cut(s)	323, 449, 977, 2114, 2188
BseYI	CCCAGC	1 cut(s)	1795
Bsh1236I	CGCG	3 cut(s)	50, 164, 187
BshFI	GGCC	5 cut(s)	120, 1544, 1872, 1881, 2031
BsiHKAI	GWGCWC	4 cut(s)	63, 759, 1231, 1370
BsiHKCI	CYCGRG	1 cut(s)	2113
BsiSI	CCGG	3 cut(s)	194, 219, 2161
BslFI	GGGAC	4 cut(s)	25, 460, 754, 1112
BslI	CCNNNNNNNGG	3 cut(s)	922, 1096, 2038
BsmAI	GTCTC	3 cut(s)	256, 1508, 2040
BsmBI	CGTCTC	1 cut(s)	1508
BsmFI	GGGAC	4 cut(s)	25, 460, 754, 1112
BsmI	GAATGC	1 cut(s)	166
BsnI	GGCC	5 cut(s)	120, 1544, 1872, 1881, 2031
BsoBI	CYCGRG	1 cut(s)	2113
Bsp1286I	GDGCHC	4 cut(s)	63, 759, 1231, 1370
Bsp13I	TCCGGA	1 cut(s)	2160
Bsp1407I	TGTACA	1 cut(s)	703
BspACI	CCGC	8 cut(s)	117, 213, 434, 664, 871, 1882, 1893, 1934
BspANI	GGCC	5 cut(s)	120, 1544, 1872, 1881, 2031
BspCNI	CTCAG	5 cut(s)	268, 829, 1522, 1933, 2050
BspEI	TCCGGA	1 cut(s)	2160
BspFNI	CGCG	3 cut(s)	50, 164, 187
BspLI	GGNNCC	4 cut(s)	217, 448, 742, 2070
BspMAI	CTGCAG	2 cut(s)	2020, 2104
BspPI	GGATC	3 cut(s)	342, 1785, 1930
BspQI	GCTCTTC	1 cut(s)	747
BspTI	CTTAAG	1 cut(s)	938
BsrDI	GCAATG	1 cut(s)	589
BsrFI	RCCGGY	1 cut(s)	193
BsrGI	TGTACA	1 cut(s)	703
BsrI	ACTGG	5 cut(s)	691, 1599, 1740, 2032, 2098
BssAI	RCCGGY	1 cut(s)	193
BssECI	CCNNGG	3 cut(s)	121, 915, 1028
BssNI	GRCGYC	1 cut(s)	207
BssT1I	CCWWGG	1 cut(s)	121
Bst2UI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
Bst4CI	ACNGT	3 cut(s)	1395, 1763, 2209
Bst6I	CTCTTC	2 cut(s)	72, 747
BstACI	GRCGYC	1 cut(s)	207
BstAFI	CTTAAG	1 cut(s)	938
BstAPI	GCANNNNNTGC	1 cut(s)	58
BstAUI	TGTACA	1 cut(s)	703
BstC8I	GCNNGC	5 cut(s)	191, 630, 1087, 1650, 1874
BstDEI	CTNAG	7 cut(s)	276, 837, 1006, 1223, 1530, 1941, 2037
BstENI	CCTNNNNNAGG	1 cut(s)	920
BstF5I	GGATG	8 cut(s)	571, 672, 744, 883, 1180, 1288, 1689, 2084
BstFNI	CGCG	3 cut(s)	50, 164, 187
BstHHI	GCGC	5 cut(s)	52, 166, 189, 595, 1719
BstMAI	GTCTC	3 cut(s)	256, 1508, 2040
BstMWI	GCNNNNNNNGC	9 cut(s)	58, 184, 213, 670, 1054, 1541, 1878, 1890, 1934
BstNI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
BstSCI	CCNGG	6 cut(s)	747, 915, 1027, 1089, 1670, 1876
BstSFI	CTRYAG	2 cut(s)	2016, 2100
BstSLI	GKGCMC	1 cut(s)	63
BstUI	CGCG	3 cut(s)	50, 164, 187
BstV1I	GCAGC	5 cut(s)	323, 449, 977, 2114, 2188
BstV2I	GAAGAC	2 cut(s)	1185, 1818
BstX2I	RGATCY	3 cut(s)	90, 1777, 1922
BstYI	RGATCY	3 cut(s)	90, 1777, 1922
BsuRI	GGCC	5 cut(s)	120, 1544, 1872, 1881, 2031
BtrI	CACGTC	1 cut(s)	58
BtsCI	GGATG	8 cut(s)	571, 672, 744, 883, 1180, 1288, 1689, 2084
BtsIMutI	CAGTG	3 cut(s)	1803, 2091, 2205
Cac8I	GCNNGC	5 cut(s)	191, 630, 1087, 1650, 1874
CfoI	GCGC	5 cut(s)	52, 166, 189, 595, 1719
Cfr10I	RCCGGY	1 cut(s)	193
Cfr13I	GGNCC	4 cut(s)	447, 741, 984, 2029
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	2 cut(s)	704, 1592
CviQI	GTAC	2 cut(s)	704, 1592
DdeI	CTNAG	7 cut(s)	276, 837, 1006, 1223, 1530, 1941, 2037
DraI	TTTAAA	1 cut(s)	898
DriI	GACNNNNNGTC	1 cut(s)	832
EaeI	YGGCCR	2 cut(s)	118, 1879
Eam1104I	CTCTTC	2 cut(s)	72, 747
Eam1105I	GACNNNNNGTC	1 cut(s)	832
EarI	CTCTTC	2 cut(s)	72, 747
Ecl136II	GAGCTC	2 cut(s)	757, 1229
Eco130I	CCWWGG	1 cut(s)	121
Eco147I	AGGCCT	1 cut(s)	1872
Eco24I	GRGCYC	2 cut(s)	759, 1231
Eco47I	GGWCC	3 cut(s)	447, 741, 984
Eco53kI	GAGCTC	2 cut(s)	757, 1229
Eco57I	CTGAAG	5 cut(s)	251, 1176, 1277, 1295, 2013
Eco88I	CYCGRG	1 cut(s)	2113
EcoICRI	GAGCTC	2 cut(s)	757, 1229
EcoNI	CCTNNNNNAGG	1 cut(s)	920
EcoO109I	RGGNCCY	1 cut(s)	984
EcoRII	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1670, 1876
EcoT14I	CCWWGG	1 cut(s)	121
EcoT22I	ATGCAT	1 cut(s)	1015
EcoT38I	GRGCYC	2 cut(s)	759, 1231
ErhI	CCWWGG	1 cut(s)	121
Esp3I	CGTCTC	1 cut(s)	1508
FaqI	GGGAC	4 cut(s)	25, 460, 754, 1112
FauI	CCCGC	1 cut(s)	864
FbaI	TGATCA	2 cut(s)	1293, 1725
FokI	GGATG	8 cut(s)	578, 679, 731, 890, 1187, 1295, 1696, 2071
FriOI	GRGCYC	2 cut(s)	759, 1231
FspBI	CTAG	6 cut(s)	345, 414, 641, 674, 1470, 1491
FspI	TGCGCA	1 cut(s)	594
GlaI	GCGC	5 cut(s)	51, 165, 188, 594, 1718
GsaI	CCCAGC	1 cut(s)	1799
GsuI	CTGGAG	2 cut(s)	938, 1938
HaeIII	GGCC	5 cut(s)	120, 1544, 1872, 1881, 2031
HapII	CCGG	3 cut(s)	194, 219, 2161
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	5 cut(s)	52, 166, 189, 595, 1719
Hin1I	GRCGYC	1 cut(s)	207
Hin6I	GCGC	5 cut(s)	50, 164, 187, 593, 1717
HinP1I	GCGC	5 cut(s)	50, 164, 187, 593, 1717
HincII	GTYRAC	1 cut(s)	1711
HindII	GTYRAC	1 cut(s)	1711
HindIII	AAGCTT	1 cut(s)	1568
HpaII	CCGG	3 cut(s)	194, 219, 2161
HphI	GGTGA	1 cut(s)	471
Hpy166II	GTNNAC	2 cut(s)	61, 1711
Hpy8I	GTNNAC	2 cut(s)	61, 1711
Hpy99I	CGWCG	5 cut(s)	68, 77, 184, 187, 212
HpyAV	CCTTC	8 cut(s)	916, 1027, 1072, 1255, 1438, 1451, 1963, 2001
HpyCH4III	ACNGT	3 cut(s)	1395, 1763, 2209
HpyCH4IV	ACGT	2 cut(s)	57, 833
HpyF10VI	GCNNNNNNNGC	9 cut(s)	58, 184, 213, 670, 1054, 1541, 1878, 1890, 1934
HpyF3I	CTNAG	7 cut(s)	276, 837, 1006, 1223, 1530, 1941, 2037
HpySE526I	ACGT	2 cut(s)	57, 833
Hsp92I	GRCGYC	1 cut(s)	207
HspAI	GCGC	5 cut(s)	50, 164, 187, 593, 1717
Kpn2I	TCCGGA	1 cut(s)	2160
Ksp22I	TGATCA	2 cut(s)	1293, 1725
LguI	GCTCTTC	1 cut(s)	747
LmnI	GCTCC	5 cut(s)	221, 625, 670, 724, 1045
Lsp1109I	GCAGC	5 cut(s)	323, 449, 977, 2114, 2188
LweI	GCATC	8 cut(s)	407, 604, 1000, 1022, 1366, 1504, 1544, 1946
MaeI	CTAG	6 cut(s)	345, 414, 641, 674, 1470, 1491
MaeII	ACGT	2 cut(s)	57, 833
MaeIII	GTNAC	4 cut(s)	477, 714, 1731, 1738
MfeI	CAATTG	2 cut(s)	659, 1266
MflI	RGATCY	3 cut(s)	90, 1777, 1922
MhlI	GDGCHC	4 cut(s)	63, 759, 1231, 1370
MlyI	GAGTC	2 cut(s)	1780, 2021
MmeI	TCCRAC	2 cut(s)	675, 753
Mph1103I	ATGCAT	1 cut(s)	1015
MroI	TCCGGA	1 cut(s)	2160
MroXI	GAANNNNTTC	2 cut(s)	1023, 1200
MseI	TTAA	7 cut(s)	258, 288, 320, 768, 897, 939, 1677
MslI	CAYNNNNRTG	1 cut(s)	797
MspA1I	CMGCKG	2 cut(s)	1916, 2105
MspCI	CTTAAG	1 cut(s)	938
MspI	CCGG	3 cut(s)	194, 219, 2161
MspR9I	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
MunI	CAATTG	2 cut(s)	659, 1266
Mva1269I	GAATGC	1 cut(s)	166
MvaI	CCWGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
MvnI	CGCG	3 cut(s)	50, 164, 187
MwoI	GCNNNNNNNGC	9 cut(s)	58, 184, 213, 670, 1054, 1541, 1878, 1890, 1934
NlaIV	GGNNCC	4 cut(s)	217, 448, 742, 2070
NmuCI	GTSAC	1 cut(s)	477
NsbI	TGCGCA	1 cut(s)	594
NsiI	ATGCAT	1 cut(s)	1015
PaeR7I	CTCGAG	1 cut(s)	2113
PceI	AGGCCT	1 cut(s)	1872
PciSI	GCTCTTC	1 cut(s)	747
PcsI	WCGNNNNNNNCGW	5 cut(s)	54, 63, 69, 72, 197
PctI	GAATGC	1 cut(s)	166
PdmI	GAANNNNTTC	2 cut(s)	1023, 1200
PfoI	TCCNGGA	1 cut(s)	747
PleI	GAGTC	2 cut(s)	1780, 2020
PpsI	GAGTC	2 cut(s)	1780, 2020
PpuMI	RGGWCCY	1 cut(s)	984
Psp124BI	GAGCTC	2 cut(s)	759, 1231
Psp5II	RGGWCCY	1 cut(s)	984
Psp6I	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1670, 1876
PspFI	CCCAGC	1 cut(s)	1795
PspGI	CCWGG	6 cut(s)	747, 915, 1027, 1089, 1670, 1876
PspN4I	GGNNCC	4 cut(s)	217, 448, 742, 2070
PspPI	GGNCC	4 cut(s)	447, 741, 984, 2029
PspPPI	RGGWCCY	1 cut(s)	984
PstI	CTGCAG	2 cut(s)	2020, 2104
PsuI	RGATCY	3 cut(s)	90, 1777, 1922
PvuII	CAGCTG	2 cut(s)	1916, 2105
RsaI	GTAC	2 cut(s)	705, 1593
RsaNI	GTAC	2 cut(s)	704, 1592
RseI	CAYNNNNRTG	1 cut(s)	797
SacI	GAGCTC	2 cut(s)	759, 1231
SapI	GCTCTTC	1 cut(s)	747
SaqAI	TTAA	7 cut(s)	258, 288, 320, 768, 897, 939, 1677
Sau96I	GGNCC	4 cut(s)	447, 741, 984, 2029
ScaI	AGTACT	1 cut(s)	1593
SchI	GAGTC	2 cut(s)	1780, 2021
ScrFI	CCNGG	6 cut(s)	749, 917, 1029, 1091, 1672, 1878
SduI	GDGCHC	4 cut(s)	63, 759, 1231, 1370
SfaNI	GCATC	8 cut(s)	407, 604, 1000, 1022, 1366, 1504, 1544, 1946
SfcI	CTRYAG	2 cut(s)	2016, 2100
SfiI	GGCCNNNNNGGCC	1 cut(s)	1878
Sfr274I	CTCGAG	1 cut(s)	2113
SgrAI	CRCCGGYG	1 cut(s)	193
SinI	GGWCC	3 cut(s)	447, 741, 984
SlaI	CTCGAG	1 cut(s)	2113
SmiMI	CAYNNNNRTG	1 cut(s)	797
SmlI	CTYRAG	6 cut(s)	647, 938, 959, 1622, 1836, 2113
SmoI	CTYRAG	6 cut(s)	647, 938, 959, 1622, 1836, 2113
SseBI	AGGCCT	1 cut(s)	1872
SsiI	CCGC	8 cut(s)	117, 213, 434, 664, 871, 1882, 1893, 1934
SspI	AATATT	1 cut(s)	1236
SspMI	CTAG	6 cut(s)	345, 414, 641, 674, 1470, 1491
SstI	GAGCTC	2 cut(s)	759, 1231
StuI	AGGCCT	1 cut(s)	1872
StyD4I	CCNGG	6 cut(s)	747, 915, 1027, 1089, 1670, 1876
StyI	CCWWGG	1 cut(s)	121
TaaI	ACNGT	3 cut(s)	1395, 1763, 2209
TaiI	ACGT	2 cut(s)	60, 836
TaqI	TCGA	5 cut(s)	200, 500, 847, 1204, 2114
TatI	WGTACW	2 cut(s)	703, 1591
TauI	GCSGC	6 cut(s)	120, 216, 437, 1884, 1896, 1937
Tru1I	TTAA	7 cut(s)	258, 288, 320, 768, 897, 939, 1677
Tru9I	TTAA	7 cut(s)	258, 288, 320, 768, 897, 939, 1677
TscAI	CASTG	3 cut(s)	1810, 2098, 2212
TseFI	GTSAC	1 cut(s)	477
TseI	GCWGC	5 cut(s)	311, 437, 965, 2102, 2176
Tsp45I	GTSAC	1 cut(s)	477
TspDTI	ATGAA	8 cut(s)	633, 668, 831, 969, 1191, 1230, 1320, 1824
TspRI	CASTG	3 cut(s)	1810, 2098, 2212
Vha464I	CTTAAG	1 cut(s)	938
VneI	GTGCAC	1 cut(s)	59
VpaK11BI	GGWCC	3 cut(s)	447, 741, 984
XagI	CCTNNNNNAGG	1 cut(s)	920
XapI	RAATTY	5 cut(s)	339, 761, 1061, 2122, 2198
XbaI	TCTAGA	2 cut(s)	344, 413
XcmI	CCANNNNNNNNNTGG	1 cut(s)	542
XhoI	CTCGAG	1 cut(s)	2113
XmnI	GAANNNNTTC	2 cut(s)	1023, 1200
XspI	CTAG	6 cut(s)	345, 414, 641, 674, 1470, 1491
ZrmI	AGTACT	1 cut(s)	1593
Zsp2I	ATGCAT	1 cut(s)	1015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.