MD01G1172500.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
27451831 .. 27456383
4553 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1172500.v1.1.491

Sequence Viewer

Length: 1551 bp
ATGGAGGTGTCTCTTCTGTTGAGAATAATTTCTTCCATGGCTGTCGTGGGACTGGTTGGCTTCTTCCTCCACCTCTACAGCACTGTTTGGCTAAAATCCGAGAGGGTCAGAAGGAATCTCCGACTGCAAGGCATCAAAGGCCCTGCACCTTCTTTTCTGTATGGGAATCTTCCCGAGATGCAGAAAATCCAACAACAGCAAGAGTTGAAGCCTCCAAACCTGCTGGCTGCTGAGTTTGTAGCCCATGACTACACCTCCACTCTCTTCCCATACTTCGAACACTGGAGAAAACAATACGGTCCAGTGTACACATATTCAACAGGAATGAGGCAACATTTGTATGTGAACAACCCAGAGCTAGTGAAGGAGATGAACCAGTGTATGAGTTTGGATTTAGGCAAGCCTTCTTATGTAAGCAAGAGACTTGCACCCATGCTTGGCAATGGCATTTTGAGGTCCAATGGCATTGTTTGGTCACAGCAAAGGAAGATTGTTGCCCCTGAGTTCTTCTCAGACAAAGTCAAGGGCATGGTGTGGCTGATGCTGGAGTCTGGACAGACATTGCTTAGAAAATGGGAGGACTCCATTGAAGCACAAGGCAGTGTGAGAGCGGAGATTCAGGTGGATGAGGACTTGAGAGATTTCTCTGCAGATGTTATATCAAGAGCTTGTTTTGGAAGCTCTTACGTAAAGGGCAAAGAGATTTTCAAAAAGCTTAGAAGTCTTCAAGAAGTGATATCCAAGCAAAACTTCCTCTTTAGTAATTTGGGTGGATTGAAGAAGACAAACGAGATAGGCTGTTTGGAGAGGGAGATTGAGTCTTTGATCTGGGAGGCAGTGGAAGAAAGAGAAGGCTCGTGTGACCAAAAAGATTTGTTGCAGACAATACTAGAGGGAGCCATCAATGACCAAACCCTAGGGAAAGGTTCATCCAAGGGCTTCATAGTTGACAACTGCAAGAACATATATTTTGCAGGCCATGAATCCACAGCTGTTGCTGCCTCTTGGTGTTTGATGCTTCTCGCTTTACATCCCGAGTGGCAAGCCCGAATCAGGACGGAGTTGGTTCAAGCTTGCCCGGATGGCCTGCCGGACGCAAACTCCCTCCCTCAGTTGAAAACGATGGCCATGGTGATTCAAGAAGTCATGCGTCTATATCCGCCAGCCGCATTTGTGTCGAGAGAGGCACTCGAAGACACTCAAGTGGGAAACATGACCGTTCCAAAAGGCGTATGCTTATGGACATTGATCCCAACATTGCACAGAGACACAGAAATTTGGGGACCAGATGCAAATGAGTTCAAACCAGAGAGGTTCACCGATGGAGTCTCAAAGGCATGCAAGTTTCCCCAAGCTTATATCCCATTCGGGTTGGGGCCTAGGACATGTTTGGGCAAAAACTTAGCCATGGTTGAACTGAAGGTTGTGCTCTCACTTGTTATCTCCAAGTTTTCTTTCTCTCTATCTCCAAAATACAAGCATTCTCCTGCCTACAAAATGATTGTGGGGCCAGGAAATGGTGTACATATTATTCTCCAGAAAATCTGTTGA

Protein Analysis

517

Amino Acids

58.11

Weight (kDa)

8.6

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 86 - 497 5.7e-78 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 228
AccB7I CCANNNNNTGG 1 cut(s) 1517
AccBSI CCGCTC 1 cut(s) 611
AciI CCGC 3 cut(s) 611, 1160, 1167
AclWI GGATC 1 cut(s) 1243
AcoI YGGCCR 1 cut(s) 1125
AcsI RAATTY 1 cut(s) 1275
AcuI CTGAAG 1 cut(s) 1439
AfaI GTAC 2 cut(s) 308, 1524
AfiI CCNNNNNNNGG 3 cut(s) 437, 1053, 1517
AflIII ACRYGT 1 cut(s) 1385
AjnI CCWGG 1 cut(s) 1510
AjuI GAANNNNNNNTTGG 4 cut(s) 734, 766, 1439, 1471
AleI CACNNNNGTG 1 cut(s) 1202
AluBI AGCT 7 cut(s) 358, 668, 681, 715, 992, 1073, 1355
AluI AGCT 7 cut(s) 358, 668, 681, 715, 992, 1073, 1355
Alw21I GWGCWC 1 cut(s) 1431
Alw26I GTCTC 4 cut(s) 15, 415, 1260, 1333
AlwI GGATC 1 cut(s) 1243
Ama87I CYCGRG 2 cut(s) 173, 1034
AoxI GGCC 6 cut(s) 139, 976, 1084, 1125, 1376, 1508
ApeKI GCWGC 2 cut(s) 227, 998
ApoI RAATTY 1 cut(s) 1275
Asp700I GAANNNNTTC 1 cut(s) 28
AspA2I CCTAGG 2 cut(s) 916, 1379
AspS9I GGNCC 6 cut(s) 140, 299, 456, 1283, 1376, 1508
AsuC2I CCSGG 1 cut(s) 1079
AsuHPI GGTGA 2 cut(s) 1144, 1309
AsuII TTCGAA 1 cut(s) 276
AvaI CYCGRG 2 cut(s) 173, 1034
AvaII GGWCC 3 cut(s) 299, 456, 1283
AvrII CCTAGG 2 cut(s) 916, 1379
BalI TGGCCA 1 cut(s) 1127
BauI CACGAG 1 cut(s) 856
BbsI GAAGAC 3 cut(s) 716, 788, 1200
Bbv12I GWGCWC 1 cut(s) 1431
BbvI GCAGC 2 cut(s) 214, 985
BccI CCATC 4 cut(s) 908, 1076, 1117, 1316
BcgI CGANNNNNNTGC 2 cut(s) 1158, 1192
BciT130I CCWGG 1 cut(s) 1512
BcnI CCSGG 1 cut(s) 1079
BcoDI GTCTC 4 cut(s) 15, 415, 1260, 1333
BfaI CTAG 4 cut(s) 359, 890, 917, 1380
BfmI CTRYAG 2 cut(s) 76, 648
BfuAI ACCTGC 1 cut(s) 228
BglI GCCNNNNNGGC 1 cut(s) 1083
BisI GCNGC 3 cut(s) 228, 999, 1167
BlnI CCTAGG 2 cut(s) 916, 1379
BlsI GCNGC 3 cut(s) 229, 1000, 1168
Bme1390I CCNGG 2 cut(s) 1079, 1512
Bme18I GGWCC 3 cut(s) 299, 456, 1283
BmeT110I CYCGRG 2 cut(s) 173, 1034
BmgT120I GGNCC 6 cut(s) 140, 299, 456, 1283, 1376, 1508
BmiI GGNNCC 4 cut(s) 898, 1284, 1377, 1509
BmrFI CCNGG 2 cut(s) 1079, 1512
BmsI GCATC 5 cut(s) 141, 168, 531, 1005, 1279
BpiI GAAGAC 3 cut(s) 716, 788, 1200
BplI GAGNNNNNCTC 4 cut(s) 494, 526, 1173, 1205
BpmI CTGGAG 3 cut(s) 304, 566, 1520
Bpu14I TTCGAA 1 cut(s) 276
BpuEI CTTGAG 2 cut(s) 655, 1185
BpuMI CCSGG 1 cut(s) 1079
BsaAI YACGTR 1 cut(s) 688
BsaJI CCNNGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
BsaXI ACNNNNNCTCC 6 cut(s) 239, 269, 803, 833, 1085, 1115
Bsc4I CCNNNNNNNGG 3 cut(s) 437, 1053, 1517
Bse1I ACTGG 4 cut(s) 57, 287, 302, 376
Bse3DI GCAATG 3 cut(s) 448, 560, 1256
BseBI CCWGG 1 cut(s) 1512
BseDI CCNNGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
BseGI GGATG 4 cut(s) 631, 929, 1030, 1087
BseLI CCNNNNNNNGG 3 cut(s) 437, 1053, 1517
BseMI GCAATG 3 cut(s) 448, 560, 1256
BseMII CTCAG 4 cut(s) 222, 492, 525, 1124
BseNI ACTGG 4 cut(s) 57, 287, 302, 376
BseXI GCAGC 2 cut(s) 214, 985
BsgI GTGCAG 1 cut(s) 129
BshFI GGCC 6 cut(s) 141, 978, 1086, 1127, 1378, 1510
BsiHKAI GWGCWC 1 cut(s) 1431
BsiHKCI CYCGRG 2 cut(s) 173, 1034
BsiSI CCGG 2 cut(s) 1079, 1091
BslFI GGGAC 2 cut(s) 63, 1296
BslI CCNNNNNNNGG 3 cut(s) 437, 1053, 1517
BsmAI GTCTC 4 cut(s) 15, 415, 1260, 1333
BsmFI GGGAC 2 cut(s) 63, 1296
BsmI GAATGC 1 cut(s) 1480
BsnI GGCC 6 cut(s) 141, 978, 1086, 1127, 1378, 1510
BsoBI CYCGRG 2 cut(s) 173, 1034
Bsp119I TTCGAA 1 cut(s) 276
Bsp1286I GDGCHC 1 cut(s) 1431
Bsp1407I TGTACA 2 cut(s) 306, 1522
Bsp143I GATC 2 cut(s) 825, 1248
Bsp19I CCATGG 3 cut(s) 36, 1128, 1407
BspACI CCGC 3 cut(s) 611, 1160, 1167
BspANI GGCC 6 cut(s) 141, 978, 1086, 1127, 1378, 1510
BspCNI CTCAG 4 cut(s) 223, 493, 524, 1123
BspLI GGNNCC 4 cut(s) 898, 1284, 1377, 1509
BspMAI CTGCAG 1 cut(s) 652
BspMI ACCTGC 1 cut(s) 228
BspPI GGATC 1 cut(s) 1243
BspT104I TTCGAA 1 cut(s) 276
BsrBI CCGCTC 1 cut(s) 611
BsrDI GCAATG 3 cut(s) 448, 560, 1256
BsrGI TGTACA 2 cut(s) 306, 1522
BsrI ACTGG 4 cut(s) 57, 287, 302, 376
BssECI CCNNGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
BssMI GATC 2 cut(s) 825, 1248
BssSI CACGAG 1 cut(s) 856
BssT1I CCWWGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
Bst2BI CACGAG 1 cut(s) 856
Bst2UI CCWGG 1 cut(s) 1512
Bst4CI ACNGT 3 cut(s) 85, 299, 1219
Bst6I CTCTTC 2 cut(s) 18, 269
BstAUI TGTACA 2 cut(s) 306, 1522
BstBAI YACGTR 1 cut(s) 688
BstBI TTCGAA 1 cut(s) 276
BstC8I GCNNGC 8 cut(s) 225, 401, 976, 1044, 1075, 1088, 1164, 1339
BstDEI CTNAG 7 cut(s) 231, 501, 511, 566, 716, 1110, 1402
BstDSI CCRYGG 3 cut(s) 36, 1128, 1407
BstF5I GGATG 4 cut(s) 631, 929, 1030, 1087
BstKTI GATC 2 cut(s) 828, 1251
BstMAI GTCTC 4 cut(s) 15, 415, 1260, 1333
BstMBI GATC 2 cut(s) 825, 1248
BstMWI GCNNNNNNNGC 3 cut(s) 138, 998, 1083
BstNI CCWGG 1 cut(s) 1512
BstNSI RCATGY 2 cut(s) 1341, 1389
BstSCI CCNGG 2 cut(s) 1077, 1510
BstSFI CTRYAG 2 cut(s) 76, 648
BstSNI TACGTA 1 cut(s) 688
BstV1I GCAGC 2 cut(s) 214, 985
BstV2I GAAGAC 3 cut(s) 716, 788, 1200
BsuRI GGCC 6 cut(s) 141, 978, 1086, 1127, 1378, 1510
BtgI CCRYGG 3 cut(s) 36, 1128, 1407
BtsCI GGATG 4 cut(s) 631, 929, 1030, 1087
BtsI GCAGTG 2 cut(s) 607, 843
BtsIMutI CAGTG 6 cut(s) 81, 280, 309, 383, 607, 843
BveI ACCTGC 1 cut(s) 228
Cac8I GCNNGC 8 cut(s) 225, 401, 976, 1044, 1075, 1088, 1164, 1339
Cfr13I GGNCC 6 cut(s) 140, 299, 456, 1283, 1376, 1508
CseI GACGC 2 cut(s) 1103, 1139
Csp6I GTAC 2 cut(s) 307, 1523
CspCI CAANNNNNGTGG 2 cut(s) 976, 1011
CviQI GTAC 2 cut(s) 307, 1523
DdeI CTNAG 7 cut(s) 231, 501, 511, 566, 716, 1110, 1402
DpnI GATC 2 cut(s) 827, 1250
DpnII GATC 2 cut(s) 825, 1248
EaeI YGGCCR 1 cut(s) 1125
Eam1104I CTCTTC 2 cut(s) 18, 269
EarI CTCTTC 2 cut(s) 18, 269
EciI GGCGGA 1 cut(s) 1149
Eco105I TACGTA 1 cut(s) 688
Eco130I CCWWGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
Eco32I GATATC 1 cut(s) 738
Eco47I GGWCC 3 cut(s) 299, 456, 1283
Eco57I CTGAAG 1 cut(s) 1439
Eco88I CYCGRG 2 cut(s) 173, 1034
EcoO109I RGGNCCY 2 cut(s) 140, 1376
EcoRII CCWGG 1 cut(s) 1510
EcoRV GATATC 1 cut(s) 738
EcoT14I CCWWGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
ErhI CCWWGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
FalI AAGNNNNNCTT 2 cut(s) 734, 766
FaqI GGGAC 2 cut(s) 63, 1296
Fnu4HI GCNGC 3 cut(s) 228, 999, 1167
FokI GGATG 4 cut(s) 638, 916, 1017, 1094
Fsp4HI GCNGC 3 cut(s) 228, 999, 1167
FspBI CTAG 4 cut(s) 359, 890, 917, 1380
GluI GCNGC 3 cut(s) 228, 999, 1167
GsuI CTGGAG 3 cut(s) 304, 566, 1520
HaeIII GGCC 6 cut(s) 141, 978, 1086, 1127, 1378, 1510
HapII CCGG 2 cut(s) 1079, 1091
HgaI GACGC 2 cut(s) 1103, 1139
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HindIII AAGCTT 3 cut(s) 713, 1071, 1353
HpaII CCGG 2 cut(s) 1079, 1091
HphI GGTGA 2 cut(s) 1144, 1309
Hpy166II GTNNAC 6 cut(s) 307, 309, 346, 949, 1317, 1523
Hpy188I TCNGA 4 cut(s) 100, 110, 122, 514
Hpy188III TCNNGA 9 cut(s) 173, 552, 663, 728, 1034, 1054, 1139, 1179, 1537
Hpy8I GTNNAC 6 cut(s) 307, 309, 346, 949, 1317, 1523
HpyAV CCTTC 6 cut(s) 105, 159, 358, 414, 845, 1414
HpyCH4III ACNGT 3 cut(s) 85, 299, 1219
HpyCH4IV ACGT 1 cut(s) 687
HpyF10VI GCNNNNNNNGC 3 cut(s) 138, 998, 1083
HpyF3I CTNAG 7 cut(s) 231, 501, 511, 566, 716, 1110, 1402
HpySE526I ACGT 1 cut(s) 687
Kzo9I GATC 2 cut(s) 825, 1248
LmnI GCTCC 1 cut(s) 896
Lsp1109I GCAGC 2 cut(s) 214, 985
LweI GCATC 5 cut(s) 141, 168, 531, 1005, 1279
MaeI CTAG 4 cut(s) 359, 890, 917, 1380
MaeII ACGT 1 cut(s) 687
MaeIII GTNAC 2 cut(s) 474, 860
MalI GATC 2 cut(s) 827, 1250
MbiI CCGCTC 1 cut(s) 611
MboI GATC 2 cut(s) 825, 1248
MhlI GDGCHC 1 cut(s) 1431
MlsI TGGCCA 1 cut(s) 1127
MluCI AATT 3 cut(s) 27, 763, 1275
MluNI TGGCCA 1 cut(s) 1127
MlyI GAGTC 4 cut(s) 557, 575, 827, 1335
MmeI TCCRAC 2 cut(s) 145, 214
Mox20I TGGCCA 1 cut(s) 1127
MroXI GAANNNNTTC 1 cut(s) 28
MscI TGGCCA 1 cut(s) 1127
MslI CAYNNNNRTG 2 cut(s) 339, 1202
Msp20I TGGCCA 1 cut(s) 1127
MspA1I CMGCKG 1 cut(s) 992
MspI CCGG 2 cut(s) 1079, 1091
MspR9I CCNGG 2 cut(s) 1079, 1512
Mva1269I GAATGC 1 cut(s) 1480
MvaI CCWGG 1 cut(s) 1512
MwoI GCNNNNNNNGC 3 cut(s) 138, 998, 1083
NciI CCSGG 1 cut(s) 1079
NcoI CCATGG 3 cut(s) 36, 1128, 1407
NdeII GATC 2 cut(s) 825, 1248
NlaIV GGNNCC 4 cut(s) 898, 1284, 1377, 1509
NmuCI GTSAC 2 cut(s) 474, 860
NspI RCATGY 2 cut(s) 1341, 1389
NspV TTCGAA 1 cut(s) 276
OliI CACNNNNGTG 1 cut(s) 1202
PaeI GCATGC 1 cut(s) 1341
PciI ACATGT 1 cut(s) 1385
PctI GAATGC 1 cut(s) 1480
PdmI GAANNNNTTC 1 cut(s) 28
PfeI GAWTC 6 cut(s) 115, 166, 616, 983, 1050, 1135
PflFI GACNNNGTC 1 cut(s) 518
PflMI CCANNNNNTGG 1 cut(s) 1517
PkrI GCNGC 3 cut(s) 229, 1000, 1168
PleI GAGTC 4 cut(s) 556, 575, 826, 1334
PpsI GAGTC 4 cut(s) 556, 575, 826, 1334
Ppu21I YACGTR 1 cut(s) 688
PscI ACATGT 1 cut(s) 1385
Psp6I CCWGG 1 cut(s) 1510
PspGI CCWGG 1 cut(s) 1510
PspN4I GGNNCC 4 cut(s) 898, 1284, 1377, 1509
PspPI GGNCC 6 cut(s) 140, 299, 456, 1283, 1376, 1508
PstI CTGCAG 1 cut(s) 652
PsyI GACNNNGTC 1 cut(s) 518
PvuII CAGCTG 1 cut(s) 992
RsaI GTAC 2 cut(s) 308, 1524
RsaNI GTAC 2 cut(s) 307, 1523
RseI CAYNNNNRTG 2 cut(s) 339, 1202
SatI GCNGC 3 cut(s) 228, 999, 1167
Sau3AI GATC 2 cut(s) 825, 1248
Sau96I GGNCC 6 cut(s) 140, 299, 456, 1283, 1376, 1508
SchI GAGTC 4 cut(s) 557, 575, 827, 1335
ScrFI CCNGG 2 cut(s) 1079, 1512
SduI GDGCHC 1 cut(s) 1431
SfaNI GCATC 5 cut(s) 141, 168, 531, 1005, 1279
SfcI CTRYAG 2 cut(s) 76, 648
SfuI TTCGAA 1 cut(s) 276
SinI GGWCC 3 cut(s) 299, 456, 1283
SmiMI CAYNNNNRTG 2 cut(s) 339, 1202
SmlI CTYRAG 2 cut(s) 634, 1200
SmoI CTYRAG 2 cut(s) 634, 1200
SnaBI TACGTA 1 cut(s) 688
SphI GCATGC 1 cut(s) 1341
Sse9I AATT 3 cut(s) 27, 763, 1275
SsiI CCGC 3 cut(s) 611, 1160, 1167
SspMI CTAG 4 cut(s) 359, 890, 917, 1380
StyD4I CCNGG 2 cut(s) 1077, 1510
StyI CCWWGG 6 cut(s) 36, 916, 933, 1128, 1379, 1407
TaaI ACNGT 3 cut(s) 85, 299, 1219
TaiI ACGT 1 cut(s) 690
TaqI TCGA 3 cut(s) 276, 1178, 1191
TasI AATT 3 cut(s) 27, 763, 1275
TatI WGTACW 2 cut(s) 306, 1522
TauI GCSGC 1 cut(s) 1169
TfiI GAWTC 6 cut(s) 115, 166, 616, 983, 1050, 1135
TscAI CASTG 6 cut(s) 88, 287, 309, 383, 607, 843
TseFI GTSAC 2 cut(s) 474, 860
TseI GCWGC 2 cut(s) 227, 998
Tsp45I GTSAC 2 cut(s) 474, 860
TspDTI ATGAA 4 cut(s) 386, 918, 931, 996
TspGWI ACGGA 1 cut(s) 1073
TspRI CASTG 6 cut(s) 88, 287, 309, 383, 607, 843
Tth111I GACNNNGTC 1 cut(s) 518
Van91I CCANNNNNTGG 1 cut(s) 1517
VpaK11BI GGWCC 3 cut(s) 299, 456, 1283
XapI RAATTY 1 cut(s) 1275
XceI RCATGY 2 cut(s) 1341, 1389
XcmI CCANNNNNNNNNTGG 1 cut(s) 43
XmaJI CCTAGG 2 cut(s) 916, 1379
XmnI GAANNNNTTC 1 cut(s) 28
XspI CTAG 4 cut(s) 359, 890, 917, 1380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.