Rh1CG360300

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0004647
Physical Location & Seq
Reverse (-)
63324763 .. 63328464
3702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG360300.1

Sequence Viewer

Length: 1575 bp
ATGGAGCTCTCTCGTCATTTCAGAGTCGTTTCTTCCCTAGTTCTTTTGGGACTGGTTGGCTTCTTTCTTCATCTCTACAACACAGTCTGGTTGAAGTCCGTGAGGCTCCGAAGGAAGCTCCAAATGCAAGGCATCAAGGGCCCTACACCTTCTTTACTATATGGGAATCTCGCTGAGATGCAGAAAATCCAACTCCAAGCTCAGAAGTCTCCAAATCACTCTGAATTTGTAGCCCACGACTACACTTCCAGCCTCTTCCCGTATTTCGAACACTGGCGAAAAGAATACGGTTTAATTTACACGTATTCAACAGGATTGAGGCAGCATTTATATGTGAACCAACCAGAGCTAGTGAAGGAAATGAACCAGTGTAATAGTTTGGATTTAGGTAAGCCTTCCTATGTAAGCAAGAGACTTGCTCCCATGCTTGGAAATGGAATTCTCAGATCCAATGGCATATTTTGGTTACAACAAAGAAAAATTGTTGCACCTGAGTTTTTCACAGACAAAGTCAAGGCGATGGTAGGGTTGATGTTGGAGTCGGCGCAACCATTGCTTAGAAAATGGGAGGAGTGTATTGAAGGACAAGGAGGTATGAGAGCAGAGATTAAAGTAGATGAGCATTTAAGGGGTTTCTCAGCTGATGTTATCGCAAGGGCTTGTTTTGGGAGTTCTTATTCTAAGGGCAAAGAGATTTTCTCAAAGCTTAGAAGTCTTCAGGAAATAATGTCTCATCAACCCTTCCTCTTTGGATCATTTTCTAATTTAGGAGGGTTGAAAAAGCAAAAGGAGATAAGTTGTTTAGAGAGAGAGATAGAGTCATTGATATGGGAAACTGTGAAAGAACGCGAACGAGAAGGGTTAGAGACTTCTTCGTCAGAAAAGGATCTATTGCAGTTAATATTAGTGGGAGCCATGAGTGACCAAAGCCTAGGCAAAGGCAAGGATTCATCCAAGCGATTCATAGTTGACAACTGCAAGAACATTTACTTTGCAGGGCATGAATCCACTGGTGTTGCTGCCTCTTGGTGTTTGATGCTACTAGCTTTACATCCCGAGTGGCAATCTCGAATCAGGACCGAGTTGGCAGAAGTTTGCCCCGATGGTCAGCTAGATGCTAATTCACTCCGTCAATTGAAAACGATAAATATGGTGATTCAAGAAGTCATGCGTCTATACCCACCAGCTGCTTTTGTGTCAAGAGAAGCACTTGAAGACACCCAGGTGGGAAACATAAGCATTCCGGAAGGGGTATACTTGTGGACTTTGATCCCAACATTGCACAGAGACACAGACATTTGGGGACAAGATGCAAATGAATTCAAACCTGAGAGGTTCATTGATGGTGTCTCAAAGGCTTGCAAGTTTCCTCAAGCCTATATCCCCTTTGGTTTGGGTCCTCGAACCTGTTTAGGCAAAAACTTTGCTATGGTACAATTGAAGGTTGTCCTCTCCCTCATTATCTCCAAGTTCACTTTCTCTCTATCACCCAAATACAGACACTCCCCTGCTTTCAAAATGATTGTAGAGCCTGGAAACGGTGTACATATTCTCATTCAAAAATCTCATCTGTAG

Protein Analysis

524

Amino Acids

59.53

Weight (kDa)

9.06

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 84 - 503 5.5e-75 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 874
AccI GTMKAC 1 cut(s) 1254
AccII CGCG 1 cut(s) 849
AccIII TCCGGA 1 cut(s) 1243
AclWI GGATC 4 cut(s) 441, 760, 894, 1264
AcsI RAATTY 3 cut(s) 224, 438, 1319
AcuI CTGAAG 1 cut(s) 701
AfaI GTAC 2 cut(s) 1434, 1545
AfiI CCNNNNNNNGG 2 cut(s) 428, 1538
AflIII ACRYGT 1 cut(s) 300
AjnI CCWGG 2 cut(s) 1221, 1531
AjuI GAANNNNNNNTTGG 2 cut(s) 1460, 1492
AleI CACNNNNGTG 1 cut(s) 1223
AluBI AGCT 9 cut(s) 7, 118, 200, 349, 641, 706, 1046, 1111, 1187
AluI AGCT 9 cut(s) 7, 118, 200, 349, 641, 706, 1046, 1111, 1187
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 6 cut(s) 213, 406, 735, 860, 1281, 1354
AlwI GGATC 4 cut(s) 441, 760, 894, 1264
Ama87I CYCGRG 1 cut(s) 1055
Aor13HI TCCGGA 1 cut(s) 1243
AoxI GGCC 1 cut(s) 139
ApaI GGGCCC 1 cut(s) 143
ApeKI GCWGC 3 cut(s) 322, 1019, 1187
ApoI RAATTY 3 cut(s) 224, 438, 1319
AspA2I CCTAGG 1 cut(s) 931
AspLEI GCGC 1 cut(s) 547
AspS9I GGNCC 4 cut(s) 139, 140, 1077, 1397
AsuHPI GGTGA 2 cut(s) 1165, 1479
AsuII TTCGAA 1 cut(s) 267
AvaI CYCGRG 1 cut(s) 1055
AvaII GGWCC 2 cut(s) 1077, 1397
AvrII CCTAGG 1 cut(s) 931
BaeGI GKGCMC 1 cut(s) 143
BanII GRGCYC 2 cut(s) 9, 143
BbsI GAAGAC 2 cut(s) 707, 1221
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 3 cut(s) 334, 1006, 1174
BccI CCATC 3 cut(s) 514, 1097, 1337
BciT130I CCWGG 2 cut(s) 1223, 1533
BcoDI GTCTC 6 cut(s) 213, 406, 735, 860, 1281, 1354
BfaI CTAG 5 cut(s) 38, 350, 932, 1043, 1112
BfmI CTRYAG 1 cut(s) 1571
BisI GCNGC 3 cut(s) 323, 1020, 1188
BlnI CCTAGG 1 cut(s) 931
BlsI GCNGC 3 cut(s) 324, 1021, 1189
Bme1390I CCNGG 2 cut(s) 1223, 1533
Bme18I GGWCC 2 cut(s) 1077, 1397
BmeT110I CYCGRG 1 cut(s) 1055
BmgT120I GGNCC 4 cut(s) 139, 140, 1077, 1397
BmiI GGNNCC 4 cut(s) 107, 141, 913, 1398
BmrFI CCNGG 2 cut(s) 1223, 1533
BmsI GCATC 5 cut(s) 141, 168, 1026, 1105, 1300
BpiI GAAGAC 2 cut(s) 707, 1221
BplI GAGNNNNNCTC 4 cut(s) 403, 435, 683, 715
Bpu14I TTCGAA 1 cut(s) 267
BpuEI CTTGAG 1 cut(s) 1356
BsaAI YACGTR 1 cut(s) 303
BsaJI CCNNGG 2 cut(s) 931, 1221
BsaWI WCCGGW 1 cut(s) 1243
BsaXI ACNNNNNCTCC 2 cut(s) 1487, 1517
Bsc4I CCNNNNNNNGG 2 cut(s) 428, 1538
Bse1I ACTGG 4 cut(s) 57, 278, 367, 1015
Bse3DI GCAATG 2 cut(s) 551, 1277
BseAI TCCGGA 1 cut(s) 1243
BseBI CCWGG 2 cut(s) 1223, 1533
BseDI CCNNGG 2 cut(s) 931, 1221
BseGI GGATG 2 cut(s) 950, 1051
BseLI CCNNNNNNNGG 2 cut(s) 428, 1538
BseMI GCAATG 2 cut(s) 551, 1277
BseMII CTCAG 6 cut(s) 165, 215, 457, 483, 651, 1320
BseNI ACTGG 4 cut(s) 57, 278, 367, 1015
BseRI GAGGAG 1 cut(s) 584
BseSI GKGCMC 1 cut(s) 143
BseXI GCAGC 3 cut(s) 334, 1006, 1174
Bsh1236I CGCG 1 cut(s) 849
BshFI GGCC 1 cut(s) 141
BsiHKAI GWGCWC 1 cut(s) 9
BsiHKCI CYCGRG 1 cut(s) 1055
BsiSI CCGG 1 cut(s) 1244
BslFI GGGAC 2 cut(s) 63, 1317
BslI CCNNNNNNNGG 2 cut(s) 428, 1538
BsmAI GTCTC 6 cut(s) 213, 406, 735, 860, 1281, 1354
BsmFI GGGAC 2 cut(s) 63, 1317
BsmI GAATGC 1 cut(s) 1239
BsnI GGCC 1 cut(s) 141
BsoBI CYCGRG 1 cut(s) 1055
Bsp119I TTCGAA 1 cut(s) 267
Bsp120I GGGCCC 1 cut(s) 139
Bsp1286I GDGCHC 2 cut(s) 9, 143
Bsp13I TCCGGA 1 cut(s) 1243
Bsp1407I TGTACA 1 cut(s) 1543
Bsp143I GATC 4 cut(s) 446, 752, 886, 1269
BspANI GGCC 1 cut(s) 141
BspCNI CTCAG 6 cut(s) 166, 214, 456, 484, 650, 1321
BspEI TCCGGA 1 cut(s) 1243
BspFNI CGCG 1 cut(s) 849
BspLI GGNNCC 4 cut(s) 107, 141, 913, 1398
BspPI GGATC 4 cut(s) 441, 760, 894, 1264
BspT104I TTCGAA 1 cut(s) 267
BsrDI GCAATG 2 cut(s) 551, 1277
BsrGI TGTACA 1 cut(s) 1543
BsrI ACTGG 4 cut(s) 57, 278, 367, 1015
BssECI CCNNGG 2 cut(s) 931, 1221
BssMI GATC 4 cut(s) 446, 752, 886, 1269
BssNAI GTATAC 1 cut(s) 1255
BssT1I CCWWGG 1 cut(s) 931
Bst1107I GTATAC 1 cut(s) 1255
Bst2UI CCWGG 2 cut(s) 1223, 1533
Bst4CI ACNGT 4 cut(s) 85, 290, 838, 1541
Bst6I CTCTTC 1 cut(s) 260
BstAPI GCANNNNNTGC 1 cut(s) 553
BstAUI TGTACA 1 cut(s) 1543
BstBAI YACGTR 1 cut(s) 303
BstBI TTCGAA 1 cut(s) 267
BstC8I GCNNGC 1 cut(s) 1360
BstDEI CTNAG 9 cut(s) 174, 201, 443, 492, 557, 637, 681, 707, 1329
BstF5I GGATG 2 cut(s) 950, 1051
BstFNI CGCG 1 cut(s) 849
BstHHI GCGC 1 cut(s) 547
BstKTI GATC 4 cut(s) 449, 755, 889, 1272
BstMAI GTCTC 6 cut(s) 213, 406, 735, 860, 1281, 1354
BstMBI GATC 4 cut(s) 446, 752, 886, 1269
BstMWI GCNNNNNNNGC 3 cut(s) 124, 138, 553
BstNI CCWGG 2 cut(s) 1223, 1533
BstSCI CCNGG 2 cut(s) 1221, 1531
BstSFI CTRYAG 1 cut(s) 1571
BstSLI GKGCMC 1 cut(s) 143
BstUI CGCG 1 cut(s) 849
BstV1I GCAGC 3 cut(s) 334, 1006, 1174
BstV2I GAAGAC 2 cut(s) 707, 1221
BstX2I RGATCY 2 cut(s) 446, 886
BstYI RGATCY 2 cut(s) 446, 886
BstZ17I GTATAC 1 cut(s) 1255
BsuRI GGCC 1 cut(s) 141
BtgZI GCGATG 1 cut(s) 533
BtsCI GGATG 2 cut(s) 950, 1051
BtsIMutI CAGTG 3 cut(s) 271, 374, 1008
Cac8I GCNNGC 1 cut(s) 1360
CfoI GCGC 1 cut(s) 547
Cfr13I GGNCC 4 cut(s) 139, 140, 1077, 1397
CseI GACGC 1 cut(s) 1160
Csp6I GTAC 2 cut(s) 1433, 1544
CspCI CAANNNNNGTGG 2 cut(s) 997, 1032
CviAII CATG 4 cut(s) 424, 916, 1001, 1168
CviQI GTAC 2 cut(s) 1433, 1544
DdeI CTNAG 9 cut(s) 174, 201, 443, 492, 557, 637, 681, 707, 1329
DpnI GATC 4 cut(s) 448, 754, 888, 1271
DpnII GATC 4 cut(s) 446, 752, 886, 1269
DrdI GACNNNNNNGTC 1 cut(s) 874
DseDI GACNNNNNNGTC 1 cut(s) 874
Eam1104I CTCTTC 1 cut(s) 260
EarI CTCTTC 1 cut(s) 260
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 931
Eco24I GRGCYC 2 cut(s) 9, 143
Eco47I GGWCC 2 cut(s) 1077, 1397
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 701
Eco88I CYCGRG 1 cut(s) 1055
EcoICRI GAGCTC 1 cut(s) 7
EcoO109I RGGNCCY 3 cut(s) 139, 140, 1397
EcoRI GAATTC 2 cut(s) 438, 1319
EcoRII CCWGG 2 cut(s) 1221, 1531
EcoT14I CCWWGG 1 cut(s) 931
EcoT38I GRGCYC 2 cut(s) 9, 143
ErhI CCWWGG 1 cut(s) 931
FaeI CATG 4 cut(s) 427, 919, 1004, 1171
FaqI GGGAC 2 cut(s) 63, 1317
FatI CATG 4 cut(s) 423, 915, 1000, 1167
FblI GTMKAC 1 cut(s) 1254
Fnu4HI GCNGC 3 cut(s) 323, 1020, 1188
FokI GGATG 2 cut(s) 937, 1038
FriOI GRGCYC 2 cut(s) 9, 143
Fsp4HI GCNGC 3 cut(s) 323, 1020, 1188
FspBI CTAG 5 cut(s) 38, 350, 932, 1043, 1112
GlaI GCGC 1 cut(s) 546
GluI GCNGC 3 cut(s) 323, 1020, 1188
HaeIII GGCC 1 cut(s) 141
HapII CCGG 1 cut(s) 1244
HgaI GACGC 1 cut(s) 1160
HhaI GCGC 1 cut(s) 547
Hin1II CATG 4 cut(s) 427, 919, 1004, 1171
Hin6I GCGC 1 cut(s) 545
HinP1I GCGC 1 cut(s) 545
HincII GTYRAC 1 cut(s) 970
HindII GTYRAC 1 cut(s) 970
HindIII AAGCTT 1 cut(s) 704
HinfI GANTC 9 cut(s) 24, 166, 539, 818, 947, 960, 1004, 1071, 1156
HpaII CCGG 1 cut(s) 1244
HphI GGTGA 2 cut(s) 1165, 1479
Hpy166II GTNNAC 6 cut(s) 337, 970, 1255, 1263, 1473, 1544
Hpy188I TCNGA 6 cut(s) 23, 110, 204, 223, 446, 880
Hpy188III TCNNGA 7 cut(s) 719, 1055, 1068, 1075, 1160, 1200, 1244
Hpy8I GTNNAC 6 cut(s) 337, 970, 1255, 1263, 1473, 1544
HpyAV CCTTC 9 cut(s) 105, 159, 349, 405, 575, 751, 851, 1241, 1435
HpyCH4III ACNGT 4 cut(s) 85, 290, 838, 1541
HpyCH4IV ACGT 1 cut(s) 302
HpyCH4V TGCA 9 cut(s) 127, 181, 488, 895, 978, 995, 1282, 1313, 1362
HpyF10VI GCNNNNNNNGC 3 cut(s) 124, 138, 553
HpyF3I CTNAG 9 cut(s) 174, 201, 443, 492, 557, 637, 681, 707, 1329
HpySE526I ACGT 1 cut(s) 302
Hsp92II CATG 4 cut(s) 427, 919, 1004, 1171
HspAI GCGC 1 cut(s) 545
Kpn2I TCCGGA 1 cut(s) 1243
Kzo9I GATC 4 cut(s) 446, 752, 886, 1269
LmnI GCTCC 5 cut(s) 4, 111, 123, 424, 911
Lsp1109I GCAGC 3 cut(s) 334, 1006, 1174
LweI GCATC 5 cut(s) 141, 168, 1026, 1105, 1300
MaeI CTAG 5 cut(s) 38, 350, 932, 1043, 1112
MaeII ACGT 1 cut(s) 302
MaeIII GTNAC 2 cut(s) 465, 920
MalI GATC 4 cut(s) 448, 754, 888, 1271
MboI GATC 4 cut(s) 446, 752, 886, 1269
MboII GAAGA 6 cut(s) 24, 59, 247, 707, 864, 1226
MfeI CAATTG 2 cut(s) 1133, 1436
MflI RGATCY 2 cut(s) 446, 886
MhlI GDGCHC 2 cut(s) 9, 143
MluCI AATT 9 cut(s) 224, 294, 438, 480, 763, 1120, 1133, 1319, 1436
MlyI GAGTC 3 cut(s) 33, 548, 827
MmeI TCCRAC 2 cut(s) 214, 516
MroI TCCGGA 1 cut(s) 1243
MseI TTAA 4 cut(s) 293, 609, 626, 899
MslI CAYNNNNRTG 3 cut(s) 330, 826, 1223
MspA1I CMGCKG 2 cut(s) 641, 1187
MspI CCGG 1 cut(s) 1244
MspR9I CCNGG 2 cut(s) 1223, 1533
MunI CAATTG 2 cut(s) 1133, 1436
Mva1269I GAATGC 1 cut(s) 1239
MvaI CCWGG 2 cut(s) 1223, 1533
MvnI CGCG 1 cut(s) 849
MwoI GCNNNNNNNGC 3 cut(s) 124, 138, 553
NdeII GATC 4 cut(s) 446, 752, 886, 1269
NlaIII CATG 4 cut(s) 427, 919, 1004, 1171
NlaIV GGNNCC 4 cut(s) 107, 141, 913, 1398
NmuCI GTSAC 1 cut(s) 920
NspV TTCGAA 1 cut(s) 267
OliI CACNNNNGTG 1 cut(s) 1223
PctI GAATGC 1 cut(s) 1239
PfeI GAWTC 6 cut(s) 166, 947, 960, 1004, 1071, 1156
PflFI GACNNNGTC 1 cut(s) 509
PkrI GCNGC 3 cut(s) 324, 1021, 1189
PleI GAGTC 3 cut(s) 32, 547, 826
PpsI GAGTC 3 cut(s) 32, 547, 826
Ppu21I YACGTR 1 cut(s) 303
PpuMI RGGWCCY 1 cut(s) 1397
Psp124BI GAGCTC 1 cut(s) 9
Psp5II RGGWCCY 1 cut(s) 1397
Psp6I CCWGG 2 cut(s) 1221, 1531
PspGI CCWGG 2 cut(s) 1221, 1531
PspN4I GGNNCC 4 cut(s) 107, 141, 913, 1398
PspOMI GGGCCC 1 cut(s) 139
PspPI GGNCC 4 cut(s) 139, 140, 1077, 1397
PspPPI RGGWCCY 1 cut(s) 1397
PsuI RGATCY 2 cut(s) 446, 886
PsyI GACNNNGTC 1 cut(s) 509
PvuII CAGCTG 2 cut(s) 641, 1187
RsaI GTAC 2 cut(s) 1434, 1545
RsaNI GTAC 2 cut(s) 1433, 1544
RseI CAYNNNNRTG 3 cut(s) 330, 826, 1223
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 4 cut(s) 293, 609, 626, 899
SatI GCNGC 3 cut(s) 323, 1020, 1188
Sau3AI GATC 4 cut(s) 446, 752, 886, 1269
Sau96I GGNCC 4 cut(s) 139, 140, 1077, 1397
SchI GAGTC 3 cut(s) 33, 548, 827
ScrFI CCNGG 2 cut(s) 1223, 1533
SduI GDGCHC 2 cut(s) 9, 143
SfaNI GCATC 5 cut(s) 141, 168, 1026, 1105, 1300
SfcI CTRYAG 1 cut(s) 1571
SfuI TTCGAA 1 cut(s) 267
SinI GGWCC 2 cut(s) 1077, 1397
SmiMI CAYNNNNRTG 3 cut(s) 330, 826, 1223
SmlI CTYRAG 1 cut(s) 1371
SmoI CTYRAG 1 cut(s) 1371
Sse9I AATT 9 cut(s) 224, 294, 438, 480, 763, 1120, 1133, 1319, 1436
SspI AATATT 1 cut(s) 903
SspMI CTAG 5 cut(s) 38, 350, 932, 1043, 1112
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 2 cut(s) 1221, 1531
StyI CCWWGG 1 cut(s) 931
TaaI ACNGT 4 cut(s) 85, 290, 838, 1541
TaiI ACGT 1 cut(s) 305
TaqI TCGA 3 cut(s) 267, 1069, 1402
TaqII GACCGA 1 cut(s) 1094
TasI AATT 9 cut(s) 224, 294, 438, 480, 763, 1120, 1133, 1319, 1436
TatI WGTACW 1 cut(s) 1543
TfiI GAWTC 6 cut(s) 166, 947, 960, 1004, 1071, 1156
Tru1I TTAA 4 cut(s) 293, 609, 626, 899
Tru9I TTAA 4 cut(s) 293, 609, 626, 899
TscAI CASTG 3 cut(s) 278, 374, 1015
TseFI GTSAC 1 cut(s) 920
TseI GCWGC 3 cut(s) 322, 1019, 1187
Tsp45I GTSAC 1 cut(s) 920
TspDTI ATGAA 7 cut(s) 59, 377, 939, 952, 1017, 1327, 1332
TspGWI ACGGA 2 cut(s) 88, 1118
TspRI CASTG 3 cut(s) 278, 374, 1015
Tth111I GACNNNGTC 1 cut(s) 509
VpaK11BI GGWCC 2 cut(s) 1077, 1397
XapI RAATTY 3 cut(s) 224, 438, 1319
XmaJI CCTAGG 1 cut(s) 931
XmiI GTMKAC 1 cut(s) 1254
XspI CTAG 5 cut(s) 38, 350, 932, 1043, 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.