Rh1AG383200

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0004647
Physical Location & Seq
Reverse (-)
61434195 .. 61437676
3482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG383200.1

Sequence Viewer

Length: 1224 bp
ATGGAGCTCTCTCTTCATTTCAGAATCGTTTCTTCCCTAGTTCTTTTGGGACTGGTTGGCGTCTTTCTTCATCTCTACAACACAGTCTGGTTGAAGTCCGAGAGGGTCAGAAGGAAGCTCCAAATGCAAGGCATCAAAGGCCCTACACCTTCTTTACTGTATGGGAATCTCGCTGAGATGCAGAAAATAATCCAACTCCAAGCTCAGAAGTCTTCAAATCACTCAGAATTTGTAGCCCACGACTACACTTCCAGTCTCTTCCCCTATTTCGAACACTGGAGAAAAGAATACGGATTAATTTACACGTATTCAACAGGAATGAGGCAGCATTTATATGTGAACCAACCGGAGCTAGTGAAGGAAATGAACCAGTGTATTAGTTTGGATTTAGGTAAGCCTTCATATGTGAGCAAGAGACTTGCTCCCATGCTTGGAAATGGAATTCTCAGATCCAATGGCATTGTTTGGTCACAACAAAGAAAAATTGTTGCACCTGAGTTCTTCACAGACAAAGTCAAGGCGATGGTAGGGTTGATGTTGGAGTCGGCGCAACCATTGCTTAGAAAATGGGAGGAGTGTATTGAAGGACAAGGAGGTGCAAGAGCAGAGATTCAAGTAGATAAGGATTTAAGGGATTTCTCAGCTGATGTTATCTCGAGGGCTTGTTTTGGCAGTTCTTATTCTAAGGGCAAAGAGATTTTCTCCAAGCTTAGAAGTCTTCAGGGAATAATTTCTCATCAACCCTTCCTCTTTGGATCATTTTCTAATTTTGGAGGGTTTAAGAAGCAAAAGGAGATTAGTTGTTTAGAGAGAGAGATAGAGTCACTGATATGGGAAACTGTGAAAGAACGCGAACGAGAAGGGTTAGAGGCTTCTTCGTCGGAAAAGGATCTGCTGCAGTCATTATTAGTGGGAGCCAGGAATGACCAAAGCCTAGGCAAAGGCAAGGATTCATCCAAGCGATTCATAGTTGACAACTGCAAGAACATTTACTTTGCAGGGCACGAATCCACTGGTGCTGCTGCGTCTTGGTGTCTGATGCTACTCGCTTTACATCCCGAGTGGCAAGCTCGAATCAGGACCGAGTTGGCAGAAGTTTTCCCCGATGGTCAGCTAGATGCTAATTCGCTCCCTCAACTGAGAACGGTACAAGTCTTTGCATTTAGTCTTTTATCTTCACATGAAGTTTCTCATCTCAAGAATTACAATAACCCCAAAATTTAA

Protein Analysis

407

Amino Acids

46.19

Weight (kDa)

8.94

Isoelectric Point (pI)

36.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 85 - 379 9.9e-34 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 852
AclWI GGATC 3 cut(s) 444, 763, 897
AcsI RAATTY 3 cut(s) 227, 441, 1218
AcuI CTGAAG 1 cut(s) 704
AcyI GRCGYC 1 cut(s) 60
AfaI GTAC 1 cut(s) 1149
AfiI CCNNNNNNNGG 1 cut(s) 431
AflIII ACRYGT 1 cut(s) 303
AgsI TTSAA 5 cut(s) 94, 216, 312, 584, 614
AjnI CCWGG 1 cut(s) 917
AluBI AGCT 8 cut(s) 7, 118, 203, 352, 644, 709, 1070, 1114
AluI AGCT 8 cut(s) 7, 118, 203, 352, 644, 709, 1070, 1114
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 2 cut(s) 260, 409
AlwI GGATC 3 cut(s) 444, 763, 897
Ama87I CYCGRG 2 cut(s) 655, 1058
AoxI GGCC 1 cut(s) 139
ApeKI GCWGC 4 cut(s) 325, 895, 1019, 1022
ApoI RAATTY 3 cut(s) 227, 441, 1218
AseI ATTAAT 1 cut(s) 296
Asp700I GAANNNNTTC 2 cut(s) 28, 730
AspA2I CCTAGG 1 cut(s) 934
AspLEI GCGC 1 cut(s) 550
AspS9I GGNCC 2 cut(s) 140, 1080
AsuII TTCGAA 1 cut(s) 270
AvaI CYCGRG 2 cut(s) 655, 1058
AvaII GGWCC 1 cut(s) 1080
AvrII CCTAGG 1 cut(s) 934
BaeGI GKGCMC 1 cut(s) 1005
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 2 cut(s) 204, 710
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 337, 882, 1006, 1009
BccI CCATC 2 cut(s) 517, 1100
BciT130I CCWGG 1 cut(s) 919
BcoDI GTCTC 2 cut(s) 260, 409
BfaI CTAG 4 cut(s) 38, 353, 935, 1115
BfmI CTRYAG 1 cut(s) 896
BisI GCNGC 4 cut(s) 326, 896, 1020, 1023
BlnI CCTAGG 1 cut(s) 934
BlsI GCNGC 4 cut(s) 327, 897, 1021, 1024
Bme1390I CCNGG 1 cut(s) 919
Bme18I GGWCC 1 cut(s) 1080
BmeT110I CYCGRG 2 cut(s) 655, 1058
BmgT120I GGNCC 2 cut(s) 140, 1080
BmiI GGNNCC 1 cut(s) 916
BmrFI CCNGG 1 cut(s) 919
BmsI GCATC 4 cut(s) 141, 168, 1029, 1108
BpiI GAAGAC 2 cut(s) 204, 710
BplI GAGNNNNNCTC 4 cut(s) 406, 438, 686, 718
BpmI CTGGAG 1 cut(s) 298
Bpu14I TTCGAA 1 cut(s) 270
BpuEI CTTGAG 1 cut(s) 1181
BsaAI YACGTR 1 cut(s) 306
BsaHI GRCGYC 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 934
BsaWI WCCGGW 1 cut(s) 346
Bsc4I CCNNNNNNNGG 1 cut(s) 431
Bse1I ACTGG 5 cut(s) 57, 252, 281, 370, 1018
Bse3DI GCAATG 1 cut(s) 554
BseBI CCWGG 1 cut(s) 919
BseDI CCNNGG 1 cut(s) 934
BseGI GGATG 2 cut(s) 953, 1054
BseLI CCNNNNNNNGG 1 cut(s) 431
BseMI GCAATG 1 cut(s) 554
BseMII CTCAG 7 cut(s) 165, 218, 237, 460, 486, 654, 1130
BseNI ACTGG 5 cut(s) 57, 252, 281, 370, 1018
BseRI GAGGAG 1 cut(s) 587
BseSI GKGCMC 1 cut(s) 1005
BseXI GCAGC 4 cut(s) 337, 882, 1006, 1009
Bsh1236I CGCG 1 cut(s) 852
BshFI GGCC 1 cut(s) 141
BsiHKAI GWGCWC 1 cut(s) 9
BsiHKCI CYCGRG 2 cut(s) 655, 1058
BsiSI CCGG 1 cut(s) 347
BslFI GGGAC 1 cut(s) 63
BslI CCNNNNNNNGG 1 cut(s) 431
BsmAI GTCTC 2 cut(s) 260, 409
BsmFI GGGAC 1 cut(s) 63
BsnI GGCC 1 cut(s) 141
BsoBI CYCGRG 2 cut(s) 655, 1058
Bsp119I TTCGAA 1 cut(s) 270
Bsp1286I GDGCHC 2 cut(s) 9, 1005
Bsp143I GATC 3 cut(s) 449, 755, 889
BspANI GGCC 1 cut(s) 141
BspCNI CTCAG 7 cut(s) 166, 217, 236, 459, 487, 653, 1131
BspFNI CGCG 1 cut(s) 852
BspLI GGNNCC 1 cut(s) 916
BspMAI CTGCAG 1 cut(s) 900
BspPI GGATC 3 cut(s) 444, 763, 897
BspT104I TTCGAA 1 cut(s) 270
BsrDI GCAATG 1 cut(s) 554
BsrI ACTGG 5 cut(s) 57, 252, 281, 370, 1018
BssECI CCNNGG 1 cut(s) 934
BssMI GATC 3 cut(s) 449, 755, 889
BssNI GRCGYC 1 cut(s) 60
BssT1I CCWWGG 1 cut(s) 934
Bst2UI CCWGG 1 cut(s) 919
Bst4CI ACNGT 4 cut(s) 85, 159, 841, 1147
Bst6I CTCTTC 2 cut(s) 18, 263
BstACI GRCGYC 1 cut(s) 60
BstAPI GCANNNNNTGC 1 cut(s) 556
BstBAI YACGTR 1 cut(s) 306
BstBI TTCGAA 1 cut(s) 270
BstC8I GCNNGC 1 cut(s) 1068
BstF5I GGATG 2 cut(s) 953, 1054
BstFNI CGCG 1 cut(s) 852
BstHHI GCGC 1 cut(s) 550
BstKTI GATC 3 cut(s) 452, 758, 892
BstMAI GTCTC 2 cut(s) 260, 409
BstMBI GATC 3 cut(s) 449, 755, 889
BstMWI GCNNNNNNNGC 3 cut(s) 124, 138, 556
BstNI CCWGG 1 cut(s) 919
BstSCI CCNGG 1 cut(s) 917
BstSFI CTRYAG 1 cut(s) 896
BstSLI GKGCMC 1 cut(s) 1005
BstUI CGCG 1 cut(s) 852
BstV1I GCAGC 4 cut(s) 337, 882, 1006, 1009
BstV2I GAAGAC 2 cut(s) 204, 710
BstX2I RGATCY 2 cut(s) 449, 889
BstYI RGATCY 2 cut(s) 449, 889
BsuRI GGCC 1 cut(s) 141
BtgZI GCGATG 1 cut(s) 536
BtsCI GGATG 2 cut(s) 953, 1054
BtsIMutI CAGTG 4 cut(s) 274, 377, 824, 1011
Cac8I GCNNGC 1 cut(s) 1068
CfoI GCGC 1 cut(s) 550
Cfr13I GGNCC 2 cut(s) 140, 1080
CseI GACGC 2 cut(s) 49, 1014
Csp6I GTAC 1 cut(s) 1148
CviAII CATG 2 cut(s) 427, 1181
CviQI GTAC 1 cut(s) 1148
DpnI GATC 3 cut(s) 451, 757, 891
DpnII GATC 3 cut(s) 449, 755, 889
Eam1104I CTCTTC 2 cut(s) 18, 263
EarI CTCTTC 2 cut(s) 18, 263
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 934
Eco24I GRGCYC 1 cut(s) 9
Eco47I GGWCC 1 cut(s) 1080
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 704
Eco88I CYCGRG 2 cut(s) 655, 1058
EcoICRI GAGCTC 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 140
EcoRI GAATTC 1 cut(s) 441
EcoRII CCWGG 1 cut(s) 917
EcoT14I CCWWGG 1 cut(s) 934
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 934
FaeI CATG 2 cut(s) 430, 1184
FaiI YATR 9 cut(s) 162, 334, 336, 403, 405, 428, 832, 968, 1182
FaqI GGGAC 1 cut(s) 63
FatI CATG 2 cut(s) 426, 1180
FauNDI CATATG 1 cut(s) 403
Fnu4HI GCNGC 4 cut(s) 326, 896, 1020, 1023
FokI GGATG 2 cut(s) 940, 1041
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 4 cut(s) 326, 896, 1020, 1023
FspBI CTAG 4 cut(s) 38, 353, 935, 1115
GlaI GCGC 1 cut(s) 549
GluI GCNGC 4 cut(s) 326, 896, 1020, 1023
GsuI CTGGAG 1 cut(s) 298
HaeIII GGCC 1 cut(s) 141
HapII CCGG 1 cut(s) 347
HgaI GACGC 2 cut(s) 49, 1014
HhaI GCGC 1 cut(s) 550
Hin1I GRCGYC 1 cut(s) 60
Hin1II CATG 2 cut(s) 430, 1184
Hin6I GCGC 1 cut(s) 548
HinP1I GCGC 1 cut(s) 548
HincII GTYRAC 1 cut(s) 973
HindII GTYRAC 1 cut(s) 973
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 9 cut(s) 24, 166, 542, 610, 821, 950, 963, 1007, 1074
HpaII CCGG 1 cut(s) 347
Hpy166II GTNNAC 2 cut(s) 340, 973
Hpy188I TCNGA 8 cut(s) 23, 100, 110, 207, 226, 449, 883, 1038
Hpy188III TCNNGA 4 cut(s) 655, 1058, 1078, 1198
Hpy8I GTNNAC 2 cut(s) 340, 973
Hpy99I CGWCG 1 cut(s) 883
HpyAV CCTTC 7 cut(s) 105, 159, 352, 408, 578, 754, 854
HpyCH4III ACNGT 4 cut(s) 85, 159, 841, 1147
HpyCH4IV ACGT 1 cut(s) 305
HpyCH4V TGCA 8 cut(s) 127, 181, 491, 599, 898, 981, 998, 1160
HpyF10VI GCNNNNNNNGC 3 cut(s) 124, 138, 556
HpySE526I ACGT 1 cut(s) 305
Hsp92I GRCGYC 1 cut(s) 60
Hsp92II CATG 2 cut(s) 430, 1184
HspAI GCGC 1 cut(s) 548
Kzo9I GATC 3 cut(s) 449, 755, 889
LmnI GCTCC 6 cut(s) 4, 123, 349, 427, 914, 1134
Lsp1109I GCAGC 4 cut(s) 337, 882, 1006, 1009
LweI GCATC 4 cut(s) 141, 168, 1029, 1108
MaeI CTAG 4 cut(s) 38, 353, 935, 1115
MaeII ACGT 1 cut(s) 305
MaeIII GTNAC 2 cut(s) 468, 822
MalI GATC 3 cut(s) 451, 757, 891
MboI GATC 3 cut(s) 449, 755, 889
MboII GAAGA 9 cut(s) 5, 24, 59, 204, 250, 493, 710, 867, 1167
MflI RGATCY 2 cut(s) 449, 889
MhlI GDGCHC 2 cut(s) 9, 1005
MluCI AATT 9 cut(s) 227, 297, 441, 483, 729, 766, 1123, 1201, 1218
MlyI GAGTC 2 cut(s) 551, 830
MmeI TCCRAC 3 cut(s) 217, 519, 861
MnlI CCTC 9 cut(s) 96, 315, 565, 587, 651, 758, 767, 862, 1143
MroXI GAANNNNTTC 2 cut(s) 28, 730
MseI TTAA 4 cut(s) 296, 629, 780, 1222
MslI CAYNNNNRTG 2 cut(s) 333, 829
MspA1I CMGCKG 1 cut(s) 644
MspI CCGG 1 cut(s) 347
MspR9I CCNGG 1 cut(s) 919
MvaI CCWGG 1 cut(s) 919
MvnI CGCG 1 cut(s) 852
MwoI GCNNNNNNNGC 3 cut(s) 124, 138, 556
NdeI CATATG 1 cut(s) 403
NdeII GATC 3 cut(s) 449, 755, 889
NlaIII CATG 2 cut(s) 430, 1184
NlaIV GGNNCC 1 cut(s) 916
NmuCI GTSAC 2 cut(s) 468, 822
NspV TTCGAA 1 cut(s) 270
PaeR7I CTCGAG 1 cut(s) 655
PdmI GAANNNNTTC 2 cut(s) 28, 730
PfeI GAWTC 7 cut(s) 24, 166, 610, 950, 963, 1007, 1074
PflFI GACNNNGTC 1 cut(s) 512
PkrI GCNGC 4 cut(s) 327, 897, 1021, 1024
PleI GAGTC 2 cut(s) 550, 829
PpsI GAGTC 2 cut(s) 550, 829
Ppu21I YACGTR 1 cut(s) 306
PshBI ATTAAT 1 cut(s) 296
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 917
PspGI CCWGG 1 cut(s) 917
PspN4I GGNNCC 1 cut(s) 916
PspPI GGNCC 2 cut(s) 140, 1080
PstI CTGCAG 1 cut(s) 900
PsuI RGATCY 2 cut(s) 449, 889
PsyI GACNNNGTC 1 cut(s) 512
PvuII CAGCTG 1 cut(s) 644
RsaI GTAC 1 cut(s) 1149
RsaNI GTAC 1 cut(s) 1148
RseI CAYNNNNRTG 2 cut(s) 333, 829
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 4 cut(s) 296, 629, 780, 1222
SatI GCNGC 4 cut(s) 326, 896, 1020, 1023
Sau3AI GATC 3 cut(s) 449, 755, 889
Sau96I GGNCC 2 cut(s) 140, 1080
SchI GAGTC 2 cut(s) 551, 830
ScrFI CCNGG 1 cut(s) 919
SduI GDGCHC 2 cut(s) 9, 1005
SfaNI GCATC 4 cut(s) 141, 168, 1029, 1108
SfcI CTRYAG 1 cut(s) 896
Sfr274I CTCGAG 1 cut(s) 655
SfuI TTCGAA 1 cut(s) 270
SinI GGWCC 1 cut(s) 1080
SlaI CTCGAG 1 cut(s) 655
SmiMI CAYNNNNRTG 2 cut(s) 333, 829
SmlI CTYRAG 2 cut(s) 655, 1196
SmoI CTYRAG 2 cut(s) 655, 1196
Sse9I AATT 9 cut(s) 227, 297, 441, 483, 729, 766, 1123, 1201, 1218
SspMI CTAG 4 cut(s) 38, 353, 935, 1115
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 1 cut(s) 917
StyI CCWWGG 1 cut(s) 934
TaaI ACNGT 4 cut(s) 85, 159, 841, 1147
TaiI ACGT 1 cut(s) 308
TaqI TCGA 3 cut(s) 270, 656, 1072
TaqII GACCGA 1 cut(s) 1097
TasI AATT 9 cut(s) 227, 297, 441, 483, 729, 766, 1123, 1201, 1218
TfiI GAWTC 7 cut(s) 24, 166, 610, 950, 963, 1007, 1074
Tru1I TTAA 4 cut(s) 296, 629, 780, 1222
Tru9I TTAA 4 cut(s) 296, 629, 780, 1222
TscAI CASTG 4 cut(s) 281, 377, 831, 1018
TseFI GTSAC 2 cut(s) 468, 822
TseI GCWGC 4 cut(s) 325, 895, 1019, 1022
Tsp45I GTSAC 2 cut(s) 468, 822
TspDTI ATGAA 7 cut(s) 5, 59, 380, 390, 942, 955, 1197
TspGWI ACGGA 1 cut(s) 306
TspRI CASTG 4 cut(s) 281, 377, 831, 1018
Tth111I GACNNNGTC 1 cut(s) 512
VpaK11BI GGWCC 1 cut(s) 1080
VspI ATTAAT 1 cut(s) 296
XapI RAATTY 3 cut(s) 227, 441, 1218
XhoI CTCGAG 1 cut(s) 655
XmaJI CCTAGG 1 cut(s) 934
XmnI GAANNNNTTC 2 cut(s) 28, 730
XspI CTAG 4 cut(s) 38, 353, 935, 1115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.