MD07G1238800.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
31049651 .. 31054087
4437 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1238800.v1.1.491

Sequence Viewer

Length: 1545 bp
ATGGATGTCTATATTGTCTTGAGAATAATTTCTTCCATGGCTGTCGTGGGACTGGTTGGCTTCTACCTCCACCTCTACCGCACTGTTTGGCTAAAGTCCGAGAGAGTCAGAAGGAAGCTCCGACTGCAAGGCATCAAAGGCCCTGCACCTACCTTTCTGTATGGGAATCTTCCCGAGATGCAGAAAATCCAACAACTGCAAGAGTTGAAGACTCCAAACCTGCAGGCTGATTTTATAGCCCATGACTACACCTCCACTCTCTTCCCTTATTTCGAACACTGGAGAAAACAATACGGTCTAGTGTACACATATTCAACAGGAATGAGGCAACATTTGTATGTGAACAACCCAGAACTAGTGAAGGAAATGAACCAGTGCATGAGTTTGGATTTAGGCAAGCCTACTTATGTAAGCAAGAGACTTGCACCCATGCTTGGCAATGGAATTGTGAGGTCCAATGGCATTGTTTGGTCACAGCAAAGGAAGATTGTTGCCCCTGAGTTCTTCTCAGACAAAGTCAAGGGCATGGTGTCGCTGATGCTGGAGTCAGGACAGACATTGCTTAGAAAATGGGAGGACTTAATCGAAGCGCAAGGCAGCGTGACAGCGGAGATTCAGGTGGACGAGGATTTGAGAGATTTCTCTGCTGATGTTATATCAAGAACTTGTTTTGGAAGCTCTTATGTAAAGGGCAAAGAGATTTTCAAAAAGCTTAGAAGTCTTCAAGAAGTAATATCCCAGCAAAACTTCCTCTTTAGTAATTTGGGTGGATTGAAGAAGCAAAATGAGAAAGGCTTGGAGAGGGAGATAGAAACTTTGATTTGGGAGGCAGTGAAAGAAAGAGAAAGTTCATGTGACCAAAAGGATTTGTTGCAGAAAATACTAGAGGGAGCCATCAATGACCAAACCCTAGGCAATGGTTCATCCAAGCAGTTCATAGTTGACAACTGCAAGAACATATATTTTGCAGGCCATGAATCCACAGCTGTTGCTGCCTCTTGGTGTTTGATGCTGCTTGCATTACATCCTGAGTGGCAAGCCCGAATCAGGACGGAGTTGGCACAAGCTTGCCCGGATGGCCTGCCAGAGTCAAACACCCTCCCTCAGTTGAAAACGATGGCAATGGTGATCCAAGAAGTCCTGCGCCTATACCCGCCGGCTGCATTCGTGTCAAGGGAGGCACTCGAAGACACCCAAGTGGGAAACATGACTTTCCCAAAAGGCGTATGCTTATGGACATTGATCCCAACGCTGCACAGAGACACAGAAACTTGGGGACCAGATGCAAATGAGTTCAAACCAGAGAGGTTCACTGATGGAGTCTCGAAGGCATGCAAGTTTCCCCACGTCTACATCCCATTTGGGTTGGGGCCTAGGACATGTTTGGGCAAAAACCTTGCCATGGTTGAACTAAAGGTTTTGCTATCCCTTGTTATCTCCAAGTTTTCTTTCACTCTATCTCCAAAATATAAGCATTCTCCTGCCTACAAAATGATCGTGGTGCCTGGAAATGGTGTACATATTCTTATTCAGAAAATCTGTTGA

Protein Analysis

515

Amino Acids

58.33

Weight (kDa)

8.87

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 87 - 500 1.3e-78 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 228
AccB1I GGYRCC 1 cut(s) 1501
AccI GTMKAC 1 cut(s) 1350
AciI CCGC 3 cut(s) 79, 608, 1154
AclWI GGATC 2 cut(s) 1123, 1237
AfaI GTAC 2 cut(s) 305, 1518
AfiI CCNNNNNNNGG 4 cut(s) 434, 1047, 1402, 1511
AflIII ACRYGT 1 cut(s) 1379
AgsI TTSAA 8 cut(s) 208, 315, 706, 725, 775, 1111, 1297, 1409
AhlI ACTAGT 1 cut(s) 355
AjiI CACGTC 1 cut(s) 1348
AjnI CCWGG 1 cut(s) 1504
AjuI GAANNNNNNNTTGG 2 cut(s) 1433, 1465
AleI CACNNNNGTG 1 cut(s) 1196
AluBI AGCT 5 cut(s) 118, 678, 712, 986, 1067
AluI AGCT 5 cut(s) 118, 678, 712, 986, 1067
Alw26I GTCTC 3 cut(s) 412, 1254, 1327
AlwI GGATC 2 cut(s) 1123, 1237
Ama87I CYCGRG 1 cut(s) 173
AoxI GGCC 4 cut(s) 139, 970, 1078, 1370
ApeKI GCWGC 5 cut(s) 597, 992, 1012, 1160, 1252
Asp700I GAANNNNTTC 1 cut(s) 28
AspA2I CCTAGG 2 cut(s) 910, 1373
AspLEI GCGC 2 cut(s) 592, 1146
AspS9I GGNCC 4 cut(s) 140, 453, 1277, 1370
AsuC2I CCSGG 1 cut(s) 1073
AsuHPI GGTGA 1 cut(s) 1138
AsuII TTCGAA 1 cut(s) 273
AvaI CYCGRG 1 cut(s) 173
AvaII GGWCC 2 cut(s) 453, 1277
AvrII CCTAGG 2 cut(s) 910, 1373
BanI GGYRCC 1 cut(s) 1501
BbsI GAAGAC 3 cut(s) 215, 713, 1194
BbvI GCAGC 5 cut(s) 609, 979, 999, 1147, 1239
BccI CCATC 4 cut(s) 902, 1070, 1111, 1310
BciT130I CCWGG 1 cut(s) 1506
BcnI CCSGG 1 cut(s) 1073
BcoDI GTCTC 3 cut(s) 412, 1254, 1327
BcuI ACTAGT 1 cut(s) 355
BfaI CTAG 5 cut(s) 299, 356, 884, 911, 1374
BfmI CTRYAG 1 cut(s) 221
BfuAI ACCTGC 1 cut(s) 228
BglI GCCNNNNNGGC 1 cut(s) 1077
BisI GCNGC 5 cut(s) 598, 993, 1013, 1161, 1253
BlnI CCTAGG 2 cut(s) 910, 1373
BlsI GCNGC 5 cut(s) 599, 994, 1014, 1162, 1254
Bme1390I CCNGG 2 cut(s) 1073, 1506
Bme18I GGWCC 2 cut(s) 453, 1277
BmeT110I CYCGRG 1 cut(s) 173
BmgBI CACGTC 1 cut(s) 1348
BmgT120I GGNCC 4 cut(s) 140, 453, 1277, 1370
BmiI GGNNCC 4 cut(s) 892, 1278, 1371, 1503
BmrFI CCNGG 2 cut(s) 1073, 1506
BmsI GCATC 5 cut(s) 141, 168, 528, 999, 1273
BpiI GAAGAC 3 cut(s) 215, 713, 1194
BplI GAGNNNNNCTC 2 cut(s) 491, 523
BpmI CTGGAG 2 cut(s) 301, 563
Bpu14I TTCGAA 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 40
BpuMI CCSGG 1 cut(s) 1073
BsaJI CCNNGG 4 cut(s) 36, 910, 1373, 1401
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 1444, 1474
Bsc4I CCNNNNNNNGG 4 cut(s) 434, 1047, 1402, 1511
Bse118I RCCGGY 1 cut(s) 1156
Bse1I ACTGG 3 cut(s) 57, 284, 373
Bse3DI GCAATG 4 cut(s) 445, 557, 922, 1128
BseBI CCWGG 1 cut(s) 1506
BseDI CCNNGG 4 cut(s) 36, 910, 1373, 1401
BseGI GGATG 5 cut(s) 10, 923, 1024, 1081, 1353
BseLI CCNNNNNNNGG 4 cut(s) 434, 1047, 1402, 1511
BseMI GCAATG 4 cut(s) 445, 557, 922, 1128
BseMII CTCAG 4 cut(s) 489, 522, 1020, 1118
BseNI ACTGG 3 cut(s) 57, 284, 373
BseXI GCAGC 5 cut(s) 609, 979, 999, 1147, 1239
BseYI CCCAGC 1 cut(s) 738
BsgI GTGCAG 2 cut(s) 129, 1238
BshFI GGCC 4 cut(s) 141, 972, 1080, 1372
BshNI GGYRCC 1 cut(s) 1501
BsiHKCI CYCGRG 1 cut(s) 173
BsiSI CCGG 2 cut(s) 1073, 1157
BslFI GGGAC 2 cut(s) 63, 1290
BslI CCNNNNNNNGG 4 cut(s) 434, 1047, 1402, 1511
BsmAI GTCTC 3 cut(s) 412, 1254, 1327
BsmFI GGGAC 2 cut(s) 63, 1290
BsmI GAATGC 2 cut(s) 1163, 1474
BsnI GGCC 4 cut(s) 141, 972, 1080, 1372
BsoBI CYCGRG 1 cut(s) 173
Bsp119I TTCGAA 1 cut(s) 273
Bsp1407I TGTACA 2 cut(s) 303, 1516
Bsp143I GATC 3 cut(s) 1128, 1242, 1494
Bsp19I CCATGG 2 cut(s) 36, 1401
BspACI CCGC 3 cut(s) 79, 608, 1154
BspANI GGCC 4 cut(s) 141, 972, 1080, 1372
BspCNI CTCAG 4 cut(s) 490, 521, 1021, 1117
BspLI GGNNCC 4 cut(s) 892, 1278, 1371, 1503
BspMAI CTGCAG 1 cut(s) 225
BspMI ACCTGC 1 cut(s) 228
BspPI GGATC 2 cut(s) 1123, 1237
BspT104I TTCGAA 1 cut(s) 273
BspT107I GGYRCC 1 cut(s) 1501
BsrDI GCAATG 4 cut(s) 445, 557, 922, 1128
BsrFI RCCGGY 1 cut(s) 1156
BsrGI TGTACA 2 cut(s) 303, 1516
BsrI ACTGG 3 cut(s) 57, 284, 373
BssAI RCCGGY 1 cut(s) 1156
BssECI CCNNGG 4 cut(s) 36, 910, 1373, 1401
BssMI GATC 3 cut(s) 1128, 1242, 1494
BssT1I CCWWGG 4 cut(s) 36, 910, 1373, 1401
Bst2UI CCWGG 1 cut(s) 1506
Bst4CI ACNGT 2 cut(s) 85, 296
Bst6I CTCTTC 1 cut(s) 266
BstAUI TGTACA 2 cut(s) 303, 1516
BstBI TTCGAA 1 cut(s) 273
BstC8I GCNNGC 9 cut(s) 225, 398, 970, 1017, 1038, 1069, 1082, 1158, 1333
BstDEI CTNAG 6 cut(s) 498, 508, 563, 713, 1029, 1104
BstDSI CCRYGG 2 cut(s) 36, 1401
BstF5I GGATG 5 cut(s) 10, 923, 1024, 1081, 1353
BstHHI GCGC 2 cut(s) 592, 1146
BstKTI GATC 3 cut(s) 1131, 1245, 1497
BstMAI GTCTC 3 cut(s) 412, 1254, 1327
BstMBI GATC 3 cut(s) 1128, 1242, 1494
BstMWI GCNNNNNNNGC 4 cut(s) 124, 138, 992, 1077
BstNI CCWGG 1 cut(s) 1506
BstNSI RCATGY 2 cut(s) 1335, 1383
BstSCI CCNGG 2 cut(s) 1071, 1504
BstSFI CTRYAG 1 cut(s) 221
BstV1I GCAGC 5 cut(s) 609, 979, 999, 1147, 1239
BstV2I GAAGAC 3 cut(s) 215, 713, 1194
BsuRI GGCC 4 cut(s) 141, 972, 1080, 1372
BtgI CCRYGG 2 cut(s) 36, 1401
BtrI CACGTC 1 cut(s) 1348
BtsCI GGATG 5 cut(s) 10, 923, 1024, 1081, 1353
BtsI GCAGTG 1 cut(s) 837
BtsIMutI CAGTG 5 cut(s) 81, 277, 380, 837, 1311
BveI ACCTGC 1 cut(s) 228
Cac8I GCNNGC 9 cut(s) 225, 398, 970, 1017, 1038, 1069, 1082, 1158, 1333
CfoI GCGC 2 cut(s) 592, 1146
Cfr10I RCCGGY 1 cut(s) 1156
Cfr13I GGNCC 4 cut(s) 140, 453, 1277, 1370
Csp6I GTAC 2 cut(s) 304, 1517
CspCI CAANNNNNGTGG 2 cut(s) 970, 1005
CviQI GTAC 2 cut(s) 304, 1517
DdeI CTNAG 6 cut(s) 498, 508, 563, 713, 1029, 1104
DpnI GATC 3 cut(s) 1130, 1244, 1496
DpnII GATC 3 cut(s) 1128, 1242, 1494
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
Eco130I CCWWGG 4 cut(s) 36, 910, 1373, 1401
Eco47I GGWCC 2 cut(s) 453, 1277
Eco88I CYCGRG 1 cut(s) 173
EcoO109I RGGNCCY 2 cut(s) 140, 1370
EcoRII CCWGG 1 cut(s) 1504
EcoT14I CCWWGG 4 cut(s) 36, 910, 1373, 1401
ErhI CCWWGG 4 cut(s) 36, 910, 1373, 1401
FaqI GGGAC 2 cut(s) 63, 1290
FauI CCCGC 1 cut(s) 1161
FblI GTMKAC 1 cut(s) 1350
Fnu4HI GCNGC 5 cut(s) 598, 993, 1013, 1161, 1253
FokI GGATG 5 cut(s) 17, 910, 1011, 1088, 1340
Fsp4HI GCNGC 5 cut(s) 598, 993, 1013, 1161, 1253
FspBI CTAG 5 cut(s) 299, 356, 884, 911, 1374
GlaI GCGC 2 cut(s) 591, 1145
GluI GCNGC 5 cut(s) 598, 993, 1013, 1161, 1253
GsaI CCCAGC 1 cut(s) 742
GsuI CTGGAG 2 cut(s) 301, 563
HaeIII GGCC 4 cut(s) 141, 972, 1080, 1372
HapII CCGG 2 cut(s) 1073, 1157
HhaI GCGC 2 cut(s) 592, 1146
Hin6I GCGC 2 cut(s) 590, 1144
HinP1I GCGC 2 cut(s) 590, 1144
HincII GTYRAC 1 cut(s) 943
HindII GTYRAC 1 cut(s) 943
HindIII AAGCTT 2 cut(s) 710, 1065
HinfI GANTC 9 cut(s) 105, 166, 211, 545, 613, 977, 1044, 1088, 1320
HpaII CCGG 2 cut(s) 1073, 1157
HphI GGTGA 1 cut(s) 1138
Hpy166II GTNNAC 8 cut(s) 304, 306, 343, 622, 943, 1311, 1351, 1517
Hpy188I TCNGA 5 cut(s) 100, 110, 122, 511, 1533
Hpy188III TCNNGA 8 cut(s) 19, 173, 549, 660, 725, 1028, 1048, 1324
Hpy8I GTNNAC 8 cut(s) 304, 306, 343, 622, 943, 1311, 1351, 1517
HpyAV CCTTC 3 cut(s) 105, 355, 1321
HpyCH4III ACNGT 2 cut(s) 85, 296
HpyCH4IV ACGT 1 cut(s) 1347
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 138, 992, 1077
HpyF3I CTNAG 6 cut(s) 498, 508, 563, 713, 1029, 1104
HpySE526I ACGT 1 cut(s) 1347
HspAI GCGC 2 cut(s) 590, 1144
KroI GCCGGC 1 cut(s) 1156
KroNI GCCGGC 1 cut(s) 1158
Kzo9I GATC 3 cut(s) 1128, 1242, 1494
LmnI GCTCC 2 cut(s) 123, 890
Lsp1109I GCAGC 5 cut(s) 609, 979, 999, 1147, 1239
LweI GCATC 5 cut(s) 141, 168, 528, 999, 1273
MaeI CTAG 5 cut(s) 299, 356, 884, 911, 1374
MaeII ACGT 1 cut(s) 1347
MaeIII GTNAC 3 cut(s) 471, 601, 854
MalI GATC 3 cut(s) 1130, 1244, 1496
MboI GATC 3 cut(s) 1128, 1242, 1494
MboII GAAGA 9 cut(s) 24, 161, 220, 253, 496, 496, 713, 787, 1199
MluCI AATT 3 cut(s) 27, 444, 760
MlyI GAGTC 5 cut(s) 114, 205, 554, 1097, 1329
MmeI TCCRAC 2 cut(s) 145, 214
MroNI GCCGGC 1 cut(s) 1156
MroXI GAANNNNTTC 1 cut(s) 28
MseI TTAA 1 cut(s) 581
MslI CAYNNNNRTG 2 cut(s) 336, 1196
MspA1I CMGCKG 2 cut(s) 608, 986
MspI CCGG 2 cut(s) 1073, 1157
MspR9I CCNGG 2 cut(s) 1073, 1506
Mva1269I GAATGC 2 cut(s) 1163, 1474
MvaI CCWGG 1 cut(s) 1506
MwoI GCNNNNNNNGC 4 cut(s) 124, 138, 992, 1077
NaeI GCCGGC 1 cut(s) 1158
NciI CCSGG 1 cut(s) 1073
NcoI CCATGG 2 cut(s) 36, 1401
NdeII GATC 3 cut(s) 1128, 1242, 1494
NgoMIV GCCGGC 1 cut(s) 1156
NlaIV GGNNCC 4 cut(s) 892, 1278, 1371, 1503
NmuCI GTSAC 3 cut(s) 471, 601, 854
NspI RCATGY 2 cut(s) 1335, 1383
NspV TTCGAA 1 cut(s) 273
OliI CACNNNNGTG 1 cut(s) 1196
PaeI GCATGC 1 cut(s) 1335
PciI ACATGT 1 cut(s) 1379
PctI GAATGC 2 cut(s) 1163, 1474
PdiI GCCGGC 1 cut(s) 1158
PdmI GAANNNNTTC 1 cut(s) 28
PfeI GAWTC 4 cut(s) 166, 613, 977, 1044
PflFI GACNNNGTC 1 cut(s) 515
PkrI GCNGC 5 cut(s) 599, 994, 1014, 1162, 1254
PleI GAGTC 5 cut(s) 113, 205, 553, 1096, 1328
PpsI GAGTC 5 cut(s) 113, 205, 553, 1096, 1328
PscI ACATGT 1 cut(s) 1379
Psp6I CCWGG 1 cut(s) 1504
PspFI CCCAGC 1 cut(s) 738
PspGI CCWGG 1 cut(s) 1504
PspN4I GGNNCC 4 cut(s) 892, 1278, 1371, 1503
PspPI GGNCC 4 cut(s) 140, 453, 1277, 1370
PstI CTGCAG 1 cut(s) 225
PsyI GACNNNGTC 1 cut(s) 515
PvuII CAGCTG 1 cut(s) 986
RsaI GTAC 2 cut(s) 305, 1518
RsaNI GTAC 2 cut(s) 304, 1517
RseI CAYNNNNRTG 2 cut(s) 336, 1196
SaqAI TTAA 1 cut(s) 581
SatI GCNGC 5 cut(s) 598, 993, 1013, 1161, 1253
Sau3AI GATC 3 cut(s) 1128, 1242, 1494
Sau96I GGNCC 4 cut(s) 140, 453, 1277, 1370
SbfI CCTGCAGG 1 cut(s) 225
SchI GAGTC 5 cut(s) 114, 205, 554, 1097, 1329
ScrFI CCNGG 2 cut(s) 1073, 1506
SdaI CCTGCAGG 1 cut(s) 225
SfaNI GCATC 5 cut(s) 141, 168, 528, 999, 1273
SfcI CTRYAG 1 cut(s) 221
SfuI TTCGAA 1 cut(s) 273
SinI GGWCC 2 cut(s) 453, 1277
SmiMI CAYNNNNRTG 2 cut(s) 336, 1196
SmlI CTYRAG 1 cut(s) 19
SmoI CTYRAG 1 cut(s) 19
SpeI ACTAGT 1 cut(s) 355
SphI GCATGC 1 cut(s) 1335
Sse8387I CCTGCAGG 1 cut(s) 225
Sse9I AATT 3 cut(s) 27, 444, 760
SsiI CCGC 3 cut(s) 79, 608, 1154
SspMI CTAG 5 cut(s) 299, 356, 884, 911, 1374
StyD4I CCNGG 2 cut(s) 1071, 1504
StyI CCWWGG 4 cut(s) 36, 910, 1373, 1401
TaaI ACNGT 2 cut(s) 85, 296
TaiI ACGT 1 cut(s) 1350
TaqI TCGA 4 cut(s) 273, 585, 1185, 1325
TasI AATT 3 cut(s) 27, 444, 760
TatI WGTACW 2 cut(s) 303, 1516
TfiI GAWTC 4 cut(s) 166, 613, 977, 1044
Tru1I TTAA 1 cut(s) 581
Tru9I TTAA 1 cut(s) 581
TscAI CASTG 5 cut(s) 88, 284, 380, 837, 1318
TseFI GTSAC 3 cut(s) 471, 601, 854
TseI GCWGC 5 cut(s) 597, 992, 1012, 1160, 1252
Tsp45I GTSAC 3 cut(s) 471, 601, 854
TspDTI ATGAA 5 cut(s) 383, 840, 912, 925, 990
TspGWI ACGGA 1 cut(s) 1067
TspRI CASTG 5 cut(s) 88, 284, 380, 837, 1318
Tth111I GACNNNGTC 1 cut(s) 515
VpaK11BI GGWCC 2 cut(s) 453, 1277
XceI RCATGY 2 cut(s) 1335, 1383
XcmI CCANNNNNNNNNTGG 1 cut(s) 43
XmaJI CCTAGG 2 cut(s) 910, 1373
XmiI GTMKAC 1 cut(s) 1350
XmnI GAANNNNTTC 1 cut(s) 28
XspI CTAG 5 cut(s) 299, 356, 884, 911, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.