Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0002987

Physical Location & Seq

Genomic Coordinates Forward (+)

29468943 .. 29470622

Gene Structure 1680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1196800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGTGCAAAGTGACATCTCCTCTCTGCTGCAATGGCAATTCAGACCACCATTACCTTGTCTCCATCAACGACTCAAAGGAACCCAAAACCCTAACGTCTCCATTGATATCCAAAACCATAACACCGCAACCAGAACAAGTACATAAATCACAGTTCAAACCCCACAATAAATCCCATTTTTCTTTGGCTTTAAAAGAAGCGAATTCCATAGCTGCCATAGCTTTCCCAATGATACTCACCGGCTTATTGCTTTATTTAAGGTCAATGATCTCCATGCTCTTCCTCGGCCGCCTTGGCGAGCTCGCCTTAGCGGGCGGTTCCCTCGCCGTGGGCTTCGCCAACATCACCGGTTACTCCATCCTCTCCGGCCTCGCCATGGGAATGGAACCTATCTGCGGCCAAGCTTTTGGCGCCAAAAAACACACTCTACTAGGCCTCTCTTTGCAGAGGATGGTCCTCCTCCTACTATTTACATCCTTACCCATTTCTCTTCTCTGGCTGAACATGAAGAAAATCCTCCTCATCTGCGGCCAGGACGAAGCCATCGCCGCCGAAGCTCAGTTGTACCTCCTCTGTTCTCTCCCTGATCTTCTCGCTCAATCTTTTCTCCACCCTCTGAGAATTTACCTCAGAAGTCAATCCATCACTCTGCCTCTCACATTGTGTGCAACCCTCGCGATCATCCTTCACATTCCCATCAACTATTTACTCGTTTCCCACCTCGATTTGGGAATCAAAGGTGTTGCTCTTAGTGGGGTTTGGTCTAACTTCAACCTCGTAGCTTCCGTGATCGTATACATCATCGTCTCTGGGGTTCACAAGAAAACCTGGGGAGGGATTTCAATGGATTGTTTCGGAGAATGGAGGACTCTTCTAAATTTAGCGGTCCCCAGCTGCATTTCTGTGTGTTTAGAATGGTGGTGGTATGAGATCATGATCTTGCTCTGTGGGTTGTTAATAAATCCGAGAGCCACCGTTGCTTCAATGGGCGTTTTAATTCAAACTACCGCTTTAATCTACATATTTCCTTCTTCCTTAAGCTTCAGTGTGTCCACGAGAGTCGGCAATGAAATCGGGGCTAACAACCCGAAAAAAGCGAAACTTGCAGCCATTGTAGGGCTCTGCTTCAGCTTTATGCTAGGCCTTTCAGCTTTGGTGTTTGCAACAACGGTGAGGAACATTTGGGCAAGCATGTTTACACAAGACAAAGACATTATAGCGCTAACATCGATGGTGTTGCCTATAATCGGGCTCTGCGAGCTCGGAAACTGCCCTCAGACGACGGGGTGCGGAGTTCTGAGAGGCACTGCAAGGCCGAAAGTCGGAGCAAACATAAACTTGGGGTGCTTTTATCTTGTCGGAATGCCGGTGGCCGTGGGTTTGGGATTCTTTCTGGGGTTTGATTTTCAGGGGCTGTGGCTCGGCCTCTTGGCGGCGGAGGGCAGCTGCGCTCTGACCATGTTGGTGGTTTTGGGTCGTACAGATTGGGAGTTTGAAGCTCGGAAAGCCAGAGAGCTGACCGGGGCTGCTGCTGCTGAGGCGGCAGTTGGTGACAGCGAAGATGTTGAGGAGGACAAGCCAAGCAAAGCTGAAATCAAGGAAGATTGTTTATGTTTATTAGGTGAGTTAGATTACGATAATAATAATAATAAAAACGATAATTATAGCTCACATGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

560

Amino Acids

60.44

Weight (kDa)

6.81

Isoelectric Point (pI)

33.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	76 - 236	1.5e-36	MatE
MatE	PF01554	297 - 458	1.2e-36	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002987)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23030 AT5G52050
fragaria_vesca	FvH4_5g01490 FvH4_5g01490 FvH4_5g01490 FvH4_5g01490 FvH4_5g01490 FvH4_7g29000
malus_domestica	MD01G1196800.v1.1 MD04G1067600.v1.1 MD06G1072600.v1.1 MD07G1264100.v1.1
prunus_persica	Prupe.2G290200_v2.0.a1 Prupe.5G091200_v2.0.a1
pyrus_communis	pycom06g07200 pycom06g07210 pycom07g24280
rosa_chinensis	RchiOBHm_Chr1g0376711 RchiOBHm_Chr7g0199211
rosa_laevigata	RLG00000003806 RLG00000026577
rosa_multiflora	Rmu_sc0000950.1_g000021 Rmu_sc0006266.1_g000073 Rmu_sc0009691.1_g000001 Rmu_sc0017062.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281860
rosa_rugosa	Rorug01G0397700.1 Rorug07G0053400
rosa_samantha	Rh1AG414800 Rh1BG374200 Rh1CG388100 Rh1DG405000 Rh7AG177100 Rh7BG180600 Rh7CG186300 Rh7DG180300
rosa_wichuraiana	Rw1G036380 Rw7G015590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	410
AccI	GTMKAC	1 cut(s)	795
AccII	CGCG	1 cut(s)	677
AcoI	YGGCCR	4 cut(s)	286, 397, 529, 1371
AcsI	RAATTY	3 cut(s)	202, 621, 877
AcuI	CTGAAG	2 cut(s)	1027, 1111
AcyI	GRCGYC	1 cut(s)	411
AdeI	CACNNNGTG	1 cut(s)	663
AfaI	GTAC	3 cut(s)	141, 566, 1480
AfeI	AGCGCT	1 cut(s)	1221
AfiI	CCNNNNNNNGG	9 cut(s)	328, 376, 395, 727, 834, 1116, 1247, 1322, 1432
AflII	CTTAAG	1 cut(s)	1036
AflIII	ACRYGT	1 cut(s)	1672
AgeI	ACCGGT	1 cut(s)	347
AgsI	TTSAA	6 cut(s)	157, 772, 843, 984, 1001, 1496
AjnI	CCWGG	2 cut(s)	531, 827
Alw21I	GWGCWC	2 cut(s)	303, 1263
Alw26I	GTCTC	3 cut(s)	64, 102, 811
AlwNI	CAGNNNCTG	1 cut(s)	1414
Aor51HI	AGCGCT	1 cut(s)	1221
AoxI	GGCC	9 cut(s)	286, 367, 397, 433, 529, 1141, 1313, 1371, 1423
ApeKI	GCWGC	9 cut(s)	27, 212, 894, 1106, 1443, 1446, 1526, 1529, 1532
ApoI	RAATTY	3 cut(s)	202, 621, 877
AsiGI	ACCGGT	1 cut(s)	347
AspLEI	GCGC	3 cut(s)	413, 1222, 1451
AspS9I	GGNCC	2 cut(s)	454, 886
AsuC2I	CCSGG	1 cut(s)	1522
AsuHPI	GGTGA	5 cut(s)	229, 337, 1183, 1562, 1634
AvaII	GGWCC	2 cut(s)	454, 886
BanI	GGYRCC	1 cut(s)	410
BanII	GRGCYC	4 cut(s)	303, 1122, 1254, 1263
BauI	CACGAG	1 cut(s)	1054
Bbv12I	GWGCWC	2 cut(s)	303, 1263
BbvCI	CCTCAGC	1 cut(s)	1536
BbvI	GCAGC	9 cut(s)	14, 199, 881, 1118, 1433, 1455, 1513, 1516, 1519
BccI	CCATC	7 cut(s)	71, 365, 445, 551, 650, 704, 1225
BceAI	ACGGC	2 cut(s)	311, 1358
BcgI	CGANNNNNNTGC	4 cut(s)	1054, 1088, 1219, 1253
BciT130I	CCWGG	2 cut(s)	533, 829
BcnI	CCSGG	1 cut(s)	1522
BcoDI	GTCTC	3 cut(s)	64, 102, 811
BfaI	CTAG	2 cut(s)	431, 1139
BfoI	RGCGCY	2 cut(s)	414, 1223
BfrI	CTTAAG	1 cut(s)	1036
BglI	GCCNNNNNGGC	1 cut(s)	294
Bme1390I	CCNGG	3 cut(s)	533, 829, 1522
Bme18I	GGWCC	2 cut(s)	454, 886
BmgT120I	GGNCC	2 cut(s)	454, 886
BmiI	GGNNCC	5 cut(s)	81, 319, 387, 412, 888
BmrFI	CCNGG	3 cut(s)	533, 829, 1522
Bpu10I	CCTNAGC	2 cut(s)	307, 1536
BpuMI	CCSGG	1 cut(s)	1522
Bsa29I	ATCGAT	1 cut(s)	1229
BsaBI	GATNNNNATC	1 cut(s)	935
BsaHI	GRCGYC	1 cut(s)	411
BsaJI	CCNNGG	7 cut(s)	283, 292, 327, 375, 828, 1374, 1521
BsaWI	WCCGGW	1 cut(s)	347
BsaXI	ACNNNNNCTCC	2 cut(s)	44, 74
Bsc4I	CCNNNNNNNGG	9 cut(s)	328, 376, 395, 727, 834, 1116, 1247, 1322, 1432
Bse118I	RCCGGY	3 cut(s)	239, 347, 1366
Bse3DI	GCAATG	2 cut(s)	37, 1072
Bse8I	GATNNNNATC	1 cut(s)	935
BseBI	CCWGG	2 cut(s)	533, 829
BseCI	ATCGAT	1 cut(s)	1229
BseDI	CCNNGG	7 cut(s)	283, 292, 327, 375, 828, 1374, 1521
BseGI	GGATG	4 cut(s)	357, 456, 473, 681
BseJI	GATNNNNATC	1 cut(s)	935
BseLI	CCNNNNNNNGG	9 cut(s)	328, 376, 395, 727, 834, 1116, 1247, 1322, 1432
BseMI	GCAATG	2 cut(s)	37, 1072
BseMII	CTCAG	6 cut(s)	572, 608, 643, 1289, 1289, 1527
BseRI	GAGGAG	5 cut(s)	9, 449, 509, 560, 1583
BseX3I	CGGCCG	1 cut(s)	286
BseXI	GCAGC	9 cut(s)	14, 199, 881, 1118, 1433, 1455, 1513, 1516, 1519
BseYI	CCCAGC	1 cut(s)	890
Bsh1236I	CGCG	1 cut(s)	677
Bsh1285I	CGRYCG	1 cut(s)	289
BshFI	GGCC	9 cut(s)	288, 369, 399, 435, 531, 1143, 1315, 1373, 1425
BshNI	GGYRCC	1 cut(s)	410
BshTI	ACCGGT	1 cut(s)	347
BshVI	ATCGAT	1 cut(s)	1229
BsiEI	CGRYCG	1 cut(s)	289
BsiHKAI	GWGCWC	2 cut(s)	303, 1263
BsiSI	CCGG	5 cut(s)	240, 348, 366, 1367, 1521
BslFI	GGGAC	1 cut(s)	872
BslI	CCNNNNNNNGG	9 cut(s)	328, 376, 395, 727, 834, 1116, 1247, 1322, 1432
BsmAI	GTCTC	3 cut(s)	64, 102, 811
BsmBI	CGTCTC	2 cut(s)	102, 811
BsmFI	GGGAC	1 cut(s)	872
BsmI	GAATGC	1 cut(s)	1368
BsnI	GGCC	9 cut(s)	288, 369, 399, 435, 531, 1143, 1315, 1373, 1425
Bsp1286I	GDGCHC	4 cut(s)	303, 1122, 1254, 1263
Bsp143I	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
Bsp19I	CCATGG	1 cut(s)	375
Bsp68I	TCGCGA	1 cut(s)	677
BspANI	GGCC	9 cut(s)	288, 369, 399, 435, 531, 1143, 1315, 1373, 1425
BspCNI	CTCAG	6 cut(s)	571, 609, 642, 1288, 1290, 1528
BspDI	ATCGAT	1 cut(s)	1229
BspFNI	CGCG	1 cut(s)	677
BspHI	TCATGA	1 cut(s)	933
BspLI	GGNNCC	5 cut(s)	81, 319, 387, 412, 888
BspQI	GCTCTTC	1 cut(s)	284
BspT107I	GGYRCC	1 cut(s)	410
BspTI	CTTAAG	1 cut(s)	1036
BsrDI	GCAATG	2 cut(s)	37, 1072
BsrFI	RCCGGY	3 cut(s)	239, 347, 1366
BssAI	RCCGGY	3 cut(s)	239, 347, 1366
BssECI	CCNNGG	7 cut(s)	283, 292, 327, 375, 828, 1374, 1521
BssMI	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
BssNAI	GTATAC	1 cut(s)	796
BssNI	GRCGYC	1 cut(s)	411
BssSI	CACGAG	1 cut(s)	1054
BssT1I	CCWWGG	2 cut(s)	292, 375
Bst1107I	GTATAC	1 cut(s)	796
Bst2BI	CACGAG	1 cut(s)	1054
Bst2UI	CCWGG	2 cut(s)	533, 829
Bst4CI	ACNGT	3 cut(s)	153, 976, 1171
Bst6I	CTCTTC	3 cut(s)	284, 495, 876
BstACI	GRCGYC	1 cut(s)	411
BstAFI	CTTAAG	1 cut(s)	1036
BstC8I	GCNNGC	5 cut(s)	299, 303, 313, 1189, 1259
BstDEI	CTNAG	8 cut(s)	307, 558, 617, 629, 749, 1275, 1298, 1536
BstDSI	CCRYGG	3 cut(s)	327, 375, 1374
BstF5I	GGATG	4 cut(s)	357, 456, 473, 681
BstFNI	CGCG	1 cut(s)	677
BstH2I	RGCGCY	2 cut(s)	414, 1223
BstHHI	GCGC	3 cut(s)	413, 1222, 1451
BstKTI	GATC	6 cut(s)	270, 589, 681, 792, 933, 939
BstMAI	GTCTC	3 cut(s)	64, 102, 811
BstMBI	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
BstMCI	CGRYCG	1 cut(s)	289
BstNI	CCWGG	2 cut(s)	533, 829
BstNSI	RCATGY	2 cut(s)	1195, 1676
BstSCI	CCNGG	3 cut(s)	531, 827, 1520
BstUI	CGCG	1 cut(s)	677
BstV1I	GCAGC	9 cut(s)	14, 199, 881, 1118, 1433, 1455, 1513, 1516, 1519
BstXI	CCANNNNNNTGG	3 cut(s)	382, 407, 1465
BstZ17I	GTATAC	1 cut(s)	796
BstZI	CGGCCG	1 cut(s)	286
Bsu15I	ATCGAT	1 cut(s)	1229
BsuRI	GGCC	9 cut(s)	288, 369, 399, 435, 531, 1143, 1315, 1373, 1425
BsuTUI	ATCGAT	1 cut(s)	1229
BtgI	CCRYGG	3 cut(s)	327, 375, 1374
BtgZI	GCGATG	1 cut(s)	529
BtsCI	GGATG	4 cut(s)	357, 456, 473, 681
BtsI	GCAGTG	1 cut(s)	1305
BtsIMutI	CAGTG	2 cut(s)	1051, 1305
BtuMI	TCGCGA	1 cut(s)	677
Cac8I	GCNNGC	5 cut(s)	299, 303, 313, 1189, 1259
CaiI	CAGNNNCTG	1 cut(s)	1414
CciI	TCATGA	1 cut(s)	933
CfoI	GCGC	3 cut(s)	413, 1222, 1451
Cfr10I	RCCGGY	3 cut(s)	239, 347, 1366
Cfr13I	GGNCC	2 cut(s)	454, 886
ClaI	ATCGAT	1 cut(s)	1229
Csp6I	GTAC	3 cut(s)	140, 565, 1479
CspAI	ACCGGT	1 cut(s)	347
CviAII	CATG	7 cut(s)	274, 376, 505, 934, 1192, 1459, 1673
CviQI	GTAC	3 cut(s)	140, 565, 1479
DdeI	CTNAG	8 cut(s)	307, 558, 617, 629, 749, 1275, 1298, 1536
DinI	GGCGCC	1 cut(s)	412
DpnI	GATC	6 cut(s)	269, 588, 680, 791, 932, 938
DpnII	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
DraI	TTTAAA	1 cut(s)	192
DraIII	CACNNNGTG	1 cut(s)	663
EaeI	YGGCCR	4 cut(s)	286, 397, 529, 1371
EagI	CGGCCG	1 cut(s)	286
Eam1104I	CTCTTC	3 cut(s)	284, 495, 876
EarI	CTCTTC	3 cut(s)	284, 495, 876
EciI	GGCGGA	1 cut(s)	1451
Ecl136II	GAGCTC	2 cut(s)	301, 1261
EclXI	CGGCCG	1 cut(s)	286
Eco130I	CCWWGG	2 cut(s)	292, 375
Eco147I	AGGCCT	2 cut(s)	435, 1143
Eco24I	GRGCYC	4 cut(s)	303, 1122, 1254, 1263
Eco32I	GATATC	1 cut(s)	108
Eco47I	GGWCC	2 cut(s)	454, 886
Eco47III	AGCGCT	1 cut(s)	1221
Eco52I	CGGCCG	1 cut(s)	286
Eco53kI	GAGCTC	2 cut(s)	301, 1261
Eco57I	CTGAAG	2 cut(s)	1027, 1111
EcoICRI	GAGCTC	2 cut(s)	301, 1261
EcoRI	GAATTC	1 cut(s)	202
EcoRII	CCWGG	2 cut(s)	531, 827
EcoRV	GATATC	1 cut(s)	108
EcoT14I	CCWWGG	2 cut(s)	292, 375
EcoT38I	GRGCYC	4 cut(s)	303, 1122, 1254, 1263
EgeI	GGCGCC	1 cut(s)	412
EheI	GGCGCC	1 cut(s)	412
ErhI	CCWWGG	2 cut(s)	292, 375
Esp3I	CGTCTC	2 cut(s)	102, 811
FaeI	CATG	7 cut(s)	277, 379, 508, 937, 1195, 1462, 1676
FalI	AAGNNNNNCTT	2 cut(s)	1086, 1118
FaqI	GGGAC	1 cut(s)	872
FatI	CATG	7 cut(s)	273, 375, 504, 933, 1191, 1458, 1672
FauI	CCCGC	1 cut(s)	304
FblI	GTMKAC	1 cut(s)	795
FokI	GGATG	4 cut(s)	344, 460, 463, 668
FriOI	GRGCYC	4 cut(s)	303, 1122, 1254, 1263
FspBI	CTAG	2 cut(s)	431, 1139
GlaI	GCGC	3 cut(s)	412, 1221, 1450
GsaI	CCCAGC	1 cut(s)	894
HaeII	RGCGCY	2 cut(s)	414, 1223
HaeIII	GGCC	9 cut(s)	288, 369, 399, 435, 531, 1143, 1315, 1373, 1425
HapII	CCGG	5 cut(s)	240, 348, 366, 1367, 1521
HhaI	GCGC	3 cut(s)	413, 1222, 1451
Hin1I	GRCGYC	1 cut(s)	411
Hin1II	CATG	7 cut(s)	277, 379, 508, 937, 1195, 1462, 1676
Hin6I	GCGC	3 cut(s)	411, 1220, 1449
HinP1I	GCGC	3 cut(s)	411, 1220, 1449
HindIII	AAGCTT	2 cut(s)	402, 1039
HinfI	GANTC	5 cut(s)	71, 732, 868, 1059, 1386
HpaII	CCGG	5 cut(s)	240, 348, 366, 1367, 1521
HphI	GGTGA	5 cut(s)	229, 337, 1183, 1562, 1634
Hpy166II	GTNNAC	4 cut(s)	796, 817, 1053, 1197
Hpy188III	TCNNGA	2 cut(s)	676, 934
Hpy8I	GTNNAC	4 cut(s)	796, 817, 1053, 1197
Hpy99I	CGWCG	1 cut(s)	1285
HpyAV	CCTTC	2 cut(s)	695, 1038
HpyCH4III	ACNGT	3 cut(s)	153, 976, 1171
HpyCH4IV	ACGT	1 cut(s)	95
HpyCH4V	TGCA	8 cut(s)	6, 30, 445, 668, 897, 1106, 1163, 1310
HpyF3I	CTNAG	8 cut(s)	307, 558, 617, 629, 749, 1275, 1298, 1536
HpySE526I	ACGT	1 cut(s)	95
Hsp92I	GRCGYC	1 cut(s)	411
Hsp92II	CATG	7 cut(s)	277, 379, 508, 937, 1195, 1462, 1676
HspAI	GCGC	3 cut(s)	411, 1220, 1449
KasI	GGCGCC	1 cut(s)	410
Kzo9I	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
LguI	GCTCTTC	1 cut(s)	284
LmnI	GCTCC	1 cut(s)	1325
Lsp1109I	GCAGC	9 cut(s)	14, 199, 881, 1118, 1433, 1455, 1513, 1516, 1519
MaeI	CTAG	2 cut(s)	431, 1139
MaeII	ACGT	1 cut(s)	95
MaeIII	GTNAC	3 cut(s)	10, 350, 1550
MalI	GATC	6 cut(s)	269, 588, 680, 791, 932, 938
MboI	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
MboII	GAAGA	8 cut(s)	271, 482, 520, 581, 863, 1023, 1571, 1613
MhlI	GDGCHC	4 cut(s)	303, 1122, 1254, 1263
MluCI	AATT	6 cut(s)	37, 202, 621, 877, 996, 1660
Mly113I	GGCGCC	1 cut(s)	411
MlyI	GAGTC	3 cut(s)	65, 862, 1068
MmeI	TCCRAC	2 cut(s)	1303, 1339
MseI	TTAA	6 cut(s)	191, 257, 956, 995, 1013, 1037
MslI	CAYNNNNRTG	3 cut(s)	380, 902, 1463
MspA1I	CMGCKG	2 cut(s)	894, 1446
MspCI	CTTAAG	1 cut(s)	1036
MspI	CCGG	5 cut(s)	240, 348, 366, 1367, 1521
MspR9I	CCNGG	3 cut(s)	533, 829, 1522
Mva1269I	GAATGC	1 cut(s)	1368
MvaI	CCWGG	2 cut(s)	533, 829
MvnI	CGCG	1 cut(s)	677
NarI	GGCGCC	1 cut(s)	411
NciI	CCSGG	1 cut(s)	1522
NcoI	CCATGG	1 cut(s)	375
NdeII	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
NlaIII	CATG	7 cut(s)	277, 379, 508, 937, 1195, 1462, 1676
NlaIV	GGNNCC	5 cut(s)	81, 319, 387, 412, 888
NmeAIII	GCCGAG	2 cut(s)	264, 1401
NmuCI	GTSAC	2 cut(s)	10, 1550
NruI	TCGCGA	1 cut(s)	677
NspI	RCATGY	2 cut(s)	1195, 1676
PagI	TCATGA	1 cut(s)	933
PceI	AGGCCT	2 cut(s)	435, 1143
PciI	ACATGT	1 cut(s)	1672
PciSI	GCTCTTC	1 cut(s)	284
PcsI	WCGNNNNNNNCGW	2 cut(s)	783, 1254
PctI	GAATGC	1 cut(s)	1368
PfeI	GAWTC	2 cut(s)	732, 1386
PinAI	ACCGGT	1 cut(s)	347
PleI	GAGTC	3 cut(s)	65, 862, 1067
PluTI	GGCGCC	1 cut(s)	414
PpsI	GAGTC	3 cut(s)	65, 862, 1067
PscI	ACATGT	1 cut(s)	1672
Psp124BI	GAGCTC	2 cut(s)	303, 1263
Psp6I	CCWGG	2 cut(s)	531, 827
PspFI	CCCAGC	1 cut(s)	890
PspGI	CCWGG	2 cut(s)	531, 827
PspN4I	GGNNCC	5 cut(s)	81, 319, 387, 412, 888
PspPI	GGNCC	2 cut(s)	454, 886
PstNI	CAGNNNCTG	1 cut(s)	1414
PvuII	CAGCTG	2 cut(s)	894, 1446
RruI	TCGCGA	1 cut(s)	677
RsaI	GTAC	3 cut(s)	141, 566, 1480
RsaNI	GTAC	3 cut(s)	140, 565, 1479
RseI	CAYNNNNRTG	3 cut(s)	380, 902, 1463
SacI	GAGCTC	2 cut(s)	303, 1263
SapI	GCTCTTC	1 cut(s)	284
SaqAI	TTAA	6 cut(s)	191, 257, 956, 995, 1013, 1037
Sau3AI	GATC	6 cut(s)	267, 586, 678, 789, 930, 936
Sau96I	GGNCC	2 cut(s)	454, 886
SchI	GAGTC	3 cut(s)	65, 862, 1068
ScrFI	CCNGG	3 cut(s)	533, 829, 1522
SduI	GDGCHC	4 cut(s)	303, 1122, 1254, 1263
SfoI	GGCGCC	1 cut(s)	412
SinI	GGWCC	2 cut(s)	454, 886
SmiMI	CAYNNNNRTG	3 cut(s)	380, 902, 1463
SmlI	CTYRAG	1 cut(s)	1036
SmoI	CTYRAG	1 cut(s)	1036
Sse9I	AATT	6 cut(s)	37, 202, 621, 877, 996, 1660
SseBI	AGGCCT	2 cut(s)	435, 1143
SspDI	GGCGCC	1 cut(s)	410
SspMI	CTAG	2 cut(s)	431, 1139
SstI	GAGCTC	2 cut(s)	303, 1263
StuI	AGGCCT	2 cut(s)	435, 1143
StyD4I	CCNGG	3 cut(s)	531, 827, 1520
StyI	CCWWGG	2 cut(s)	292, 375
TaaI	ACNGT	3 cut(s)	153, 976, 1171
TaiI	ACGT	1 cut(s)	98
TaqI	TCGA	2 cut(s)	723, 1229
TasI	AATT	6 cut(s)	37, 202, 621, 877, 996, 1660
TatI	WGTACW	1 cut(s)	139
TauI	GCSGC	6 cut(s)	291, 399, 531, 551, 1436, 1544
TfiI	GAWTC	2 cut(s)	732, 1386
Tru1I	TTAA	6 cut(s)	191, 257, 956, 995, 1013, 1037
Tru9I	TTAA	6 cut(s)	191, 257, 956, 995, 1013, 1037
TscAI	CASTG	2 cut(s)	1051, 1312
TseFI	GTSAC	2 cut(s)	10, 1550
TseI	GCWGC	9 cut(s)	27, 212, 894, 1106, 1443, 1446, 1526, 1529, 1532
Tsp45I	GTSAC	2 cut(s)	10, 1550
TspDTI	ATGAA	2 cut(s)	521, 1083
TspGWI	ACGGA	1 cut(s)	775
TspRI	CASTG	2 cut(s)	1051, 1312
Vha464I	CTTAAG	1 cut(s)	1036
VpaK11BI	GGWCC	2 cut(s)	454, 886
XapI	RAATTY	3 cut(s)	202, 621, 877
XceI	RCATGY	2 cut(s)	1195, 1676
XmiI	GTMKAC	1 cut(s)	795
XspI	CTAG	2 cut(s)	431, 1139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.