Prupe.2G290200_v2.0.a1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
28427174 .. 28429381
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G290200.1

Sequence Viewer

Length: 1671 bp
ATGTGCAAGCTGACATCTCCTTCTCCCTGCTGCAATGGCAATTCAGACCACCCTCACCTTGTCTCCATTAAAGACTCAGAAGAGCCCAAAACGCTCACTACCCCATTGATCTCCAAAAGCACAACATCCGAACCAGAACAAATACAGAAGAAGCTACAACTAAACGCACACCACCAAACACACAAACCCCACCAAAAATCCCATTTCTCCTTGGCTCTAAAAGAAGCCAATTCCATAGCCAGCATAGCTTTTCCCATGATACTCACCGGCCTTTTACTTTACTCCAGGTCAATGATCTCCATGCTCTTCCTCGGCCGCCTCGGCGAGCTCGCTTTAGCCGGCGGGTCCCTCGCCGTCGGCTTTGCTAACATCACCGGTTACTCGATTCTCTCTGGCCTCGCCATGGGAATGGAACCCATTTGTGGTCAAGCTTTTGGTGCCAAAAGGCATACTCTGCTTGGCCTCTCTTTGCAGAGAACAGTACTTCTTCTAATATTTACATCCTTACCCATTTCTCTTCTCTGGCTAAACATGAAGAAACTCCTCCTCCTTTGTGGCCAAGATGAAGCAATTGCCTCTGAAGCTCAACTTTACCTCCTCTGTTCTCTCCCTGACCTTCTTGCTCAGTGTTTACTGCACCCTTTGAGAATTTACCTCAGAACTCAATCCATTACCCTGCCTCTAACATTTTGTGCCACTTTAGCAATCATCCTTCACATTCCCATCAATTACTTTCTTGTCTCGTACCTCAATTTAGGCATCAGAGGTGTGGCTCTAAGTGGGGTTTGGTCTAACTTCAATCTCGTAGCTTCTTTAATCATCTACATCATTATCTCTGGGGTCCACAAGAAAACCTGGGGAGGGATTTCAATGGACTGCTTCAGAGAATGGAAGACTCTTCTCAATTTGGCAGTGCCAAGCTGCATTTCTGTGTGCCTAGAATGGTGGTGGTATGAGATCATGATTTTGCTCTGTGGTTTGCTGTTAAACCCAAGAGCCACTGTTGCTTCAATGGGCATTTTGATCCAAACCACTTCTCTGATCTACATATTCCCCTCGTCCCTAAGCTTCAGTGTGTCCACAAGGGTTGGCAACGAAATAGGCGCAAACCAACCGAAAAAAGCAAGGATTGCAGCCATTGTAGGCCTGTGTTGCAGCTTCATGCTAGGCCTTGCAGCTCTGATCTTTGCAGTCATGGTGAGGAACATTTGGGCAAGCATGTTCACACAGGACAAGGAGATAATAAAATTAACATCAATGGTTTTGCCTATAATTGGTCTCTGCGAGCTTGGAAATTGCCCACAAACAACAGGGTGTGGAGTTCTGAGAGGCACAGCGAGGCCTAAAGTTGGAGCAAACATAAACTTGGGGTGCTTTTACCTCGTGGGAATGCCAGTGGCTGTGGGGTTGGGTTTCGTTCTTGAGTTGGATTTTCAGGGGCTGTGGCTAGGCCTGTTGGCTGCACAGGGATGCTGTGCTCTGACCATGCTGGTGGTTTTAGGTGTTACAGATTGGGAGTTTGAAGCTCAGAAAGCCAAACAGCTGACCGGGGCTGAGGAGGTGGTTGATGACAGCGAAGAGGTTGAGGAAGACAAGCCAAGCAAAGCTAAAATCAAGGAAGATTGTTTAGATTACGCTAATAATAATACTAATAATAACTCACATGTTTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

557

Amino Acids

60.55

Weight (kDa)

7.76

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 437
AciI CCGC 2 cut(s) 316, 342
AclWI GGATC 1 cut(s) 1018
AcoI YGGCCR 2 cut(s) 313, 556
AcsI RAATTY 1 cut(s) 648
AcuI CTGAAG 3 cut(s) 600, 865, 1054
AfaI GTAC 2 cut(s) 483, 746
AfiI CCNNNNNNNGG 5 cut(s) 403, 422, 861, 1274, 1349
AflIII ACRYGT 1 cut(s) 1663
AgeI ACCGGT 1 cut(s) 374
AgsI TTSAA 4 cut(s) 799, 870, 1011, 1523
AjnI CCWGG 2 cut(s) 284, 854
AjuI GAANNNNNNNTTGG 2 cut(s) 910, 942
Alw21I GWGCWC 2 cut(s) 330, 1480
Alw26I GTCTC 3 cut(s) 67, 745, 1283
AlwI GGATC 1 cut(s) 1018
AlwNI CAGNNNCTG 2 cut(s) 1400, 1441
AoxI GGCC 9 cut(s) 268, 313, 394, 460, 556, 1144, 1168, 1340, 1450
ApeKI GCWGC 6 cut(s) 30, 921, 1133, 1155, 1175, 1460
ApoI RAATTY 1 cut(s) 648
AsiGI ACCGGT 1 cut(s) 374
AspLEI GCGC 1 cut(s) 1106
AspS9I GGNCC 2 cut(s) 345, 841
AsuC2I CCSGG 1 cut(s) 1549
AsuHPI GGTGA 4 cut(s) 47, 256, 364, 1210
AvaII GGWCC 2 cut(s) 345, 841
BalI TGGCCA 1 cut(s) 558
BanI GGYRCC 1 cut(s) 437
BanII GRGCYC 2 cut(s) 87, 330
BauI CACGAG 1 cut(s) 1382
BbsI GAAGAC 2 cut(s) 899, 1596
Bbv12I GWGCWC 2 cut(s) 330, 1480
BbvCI CCTCAGC 1 cut(s) 1554
BbvI GCAGC 6 cut(s) 17, 908, 1145, 1167, 1187, 1447
BccI CCATC 1 cut(s) 731
BceAI ACGGC 1 cut(s) 338
BciT130I CCWGG 2 cut(s) 286, 856
BcnI CCSGG 1 cut(s) 1549
BcoDI GTCTC 3 cut(s) 67, 745, 1283
BfaI CTAG 3 cut(s) 938, 1166, 1448
BglI GCCNNNNNGGC 1 cut(s) 321
BisI GCNGC 7 cut(s) 31, 316, 922, 1134, 1156, 1176, 1461
BlsI GCNGC 7 cut(s) 32, 317, 923, 1135, 1157, 1177, 1462
BmcAI AGTACT 1 cut(s) 483
Bme1390I CCNGG 3 cut(s) 286, 856, 1549
Bme18I GGWCC 2 cut(s) 345, 841
BmgT120I GGNCC 2 cut(s) 345, 841
BmiI GGNNCC 5 cut(s) 346, 347, 414, 439, 842
BmrFI CCNGG 3 cut(s) 286, 856, 1549
BmsI GCATC 2 cut(s) 768, 1460
BpiI GAAGAC 2 cut(s) 899, 1596
BpmI CTGGAG 1 cut(s) 268
Bpu10I CCTNAGC 2 cut(s) 1064, 1554
BpuEI CTTGAG 1 cut(s) 1442
BpuMI CCSGG 1 cut(s) 1549
BsaI GGTCTC 1 cut(s) 1283
BsaJI CCNNGG 6 cut(s) 210, 310, 319, 402, 855, 1548
BsaWI WCCGGW 1 cut(s) 374
BsaXI ACNNNNNCTCC 6 cut(s) 47, 77, 531, 561, 579, 609
Bsc4I CCNNNNNNNGG 5 cut(s) 403, 422, 861, 1274, 1349
Bse118I RCCGGY 3 cut(s) 266, 338, 374
Bse1I ACTGG 1 cut(s) 1394
Bse3DI GCAATG 1 cut(s) 40
BseBI CCWGG 2 cut(s) 286, 856
BseDI CCNNGG 6 cut(s) 210, 310, 319, 402, 855, 1548
BseGI GGATG 4 cut(s) 125, 500, 708, 1475
BseLI CCNNNNNNNGG 5 cut(s) 403, 422, 861, 1274, 1349
BseMI GCAATG 1 cut(s) 40
BseMII CTCAG 6 cut(s) 90, 638, 670, 1316, 1541, 1545
BseNI ACTGG 1 cut(s) 1394
BseRI GAGGAG 4 cut(s) 533, 536, 587, 1571
BseX3I CGGCCG 1 cut(s) 313
BseXI GCAGC 6 cut(s) 17, 908, 1145, 1167, 1187, 1447
BsgI GTGCAG 2 cut(s) 620, 1446
Bsh1285I CGRYCG 1 cut(s) 316
BshFI GGCC 9 cut(s) 270, 315, 396, 462, 558, 1146, 1170, 1342, 1452
BshNI GGYRCC 1 cut(s) 437
BshTI ACCGGT 1 cut(s) 374
BsiEI CGRYCG 1 cut(s) 316
BsiHKAI GWGCWC 2 cut(s) 330, 1480
BsiSI CCGG 4 cut(s) 267, 339, 375, 1548
BslFI GGGAC 2 cut(s) 331, 1045
BslI CCNNNNNNNGG 5 cut(s) 403, 422, 861, 1274, 1349
BsmAI GTCTC 3 cut(s) 67, 745, 1283
BsmFI GGGAC 2 cut(s) 331, 1045
BsmI GAATGC 1 cut(s) 1395
BsnI GGCC 9 cut(s) 270, 315, 396, 462, 558, 1146, 1170, 1342, 1452
Bso31I GGTCTC 1 cut(s) 1283
Bsp1286I GDGCHC 3 cut(s) 87, 330, 1480
Bsp143I GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
Bsp19I CCATGG 1 cut(s) 402
BspACI CCGC 2 cut(s) 316, 342
BspANI GGCC 9 cut(s) 270, 315, 396, 462, 558, 1146, 1170, 1342, 1452
BspCNI CTCAG 6 cut(s) 89, 637, 669, 1317, 1540, 1546
BspHI TCATGA 1 cut(s) 960
BspLI GGNNCC 5 cut(s) 346, 347, 414, 439, 842
BspPI GGATC 1 cut(s) 1018
BspQI GCTCTTC 2 cut(s) 75, 311
BspT107I GGYRCC 1 cut(s) 437
BspTNI GGTCTC 1 cut(s) 1283
BsrDI GCAATG 1 cut(s) 40
BsrFI RCCGGY 3 cut(s) 266, 338, 374
BsrI ACTGG 1 cut(s) 1394
BssAI RCCGGY 3 cut(s) 266, 338, 374
BssECI CCNNGG 6 cut(s) 210, 310, 319, 402, 855, 1548
BssMI GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
BssSI CACGAG 1 cut(s) 1382
BssT1I CCWWGG 2 cut(s) 210, 402
Bst2BI CACGAG 1 cut(s) 1382
Bst2UI CCWGG 2 cut(s) 286, 856
Bst4CI ACNGT 2 cut(s) 481, 1003
Bst6I CTCTTC 5 cut(s) 75, 311, 522, 903, 1572
BstAPI GCANNNNNTGC 2 cut(s) 454, 1130
BstC8I GCNNGC 7 cut(s) 8, 241, 326, 330, 340, 1216, 1286
BstDEI CTNAG 8 cut(s) 76, 624, 656, 776, 1064, 1325, 1527, 1554
BstDSI CCRYGG 1 cut(s) 402
BstF5I GGATG 4 cut(s) 125, 500, 708, 1475
BstHHI GCGC 1 cut(s) 1106
BstKTI GATC 6 cut(s) 111, 297, 960, 1026, 1044, 1185
BstMAI GTCTC 3 cut(s) 67, 745, 1283
BstMBI GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
BstMCI CGRYCG 1 cut(s) 316
BstNI CCWGG 2 cut(s) 286, 856
BstNSI RCATGY 2 cut(s) 1222, 1667
BstSCI CCNGG 3 cut(s) 284, 854, 1547
BstV1I GCAGC 6 cut(s) 17, 908, 1145, 1167, 1187, 1447
BstV2I GAAGAC 2 cut(s) 899, 1596
BstXI CCANNNNNNTGG 2 cut(s) 409, 1492
BstZI CGGCCG 1 cut(s) 313
BsuRI GGCC 9 cut(s) 270, 315, 396, 462, 558, 1146, 1170, 1342, 1452
BtgI CCRYGG 1 cut(s) 402
BtsCI GGATG 4 cut(s) 125, 500, 708, 1475
BtsI GCAGTG 1 cut(s) 918
BtsIMutI CAGTG 5 cut(s) 632, 918, 999, 1078, 1401
Cac8I GCNNGC 7 cut(s) 8, 241, 326, 330, 340, 1216, 1286
CaiI CAGNNNCTG 2 cut(s) 1400, 1441
CciI TCATGA 1 cut(s) 960
CfoI GCGC 1 cut(s) 1106
Cfr10I RCCGGY 3 cut(s) 266, 338, 374
Cfr13I GGNCC 2 cut(s) 345, 841
Csp6I GTAC 2 cut(s) 482, 745
CspAI ACCGGT 1 cut(s) 374
CspCI CAANNNNNGTGG 2 cut(s) 1069, 1104
CviQI GTAC 2 cut(s) 482, 745
DdeI CTNAG 8 cut(s) 76, 624, 656, 776, 1064, 1325, 1527, 1554
DpnI GATC 6 cut(s) 110, 296, 959, 1025, 1043, 1184
DpnII GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
EaeI YGGCCR 2 cut(s) 313, 556
EagI CGGCCG 1 cut(s) 313
Eam1104I CTCTTC 5 cut(s) 75, 311, 522, 903, 1572
EarI CTCTTC 5 cut(s) 75, 311, 522, 903, 1572
Ecl136II GAGCTC 1 cut(s) 328
EclXI CGGCCG 1 cut(s) 313
Eco130I CCWWGG 2 cut(s) 210, 402
Eco147I AGGCCT 4 cut(s) 1146, 1170, 1342, 1452
Eco24I GRGCYC 2 cut(s) 87, 330
Eco31I GGTCTC 1 cut(s) 1283
Eco47I GGWCC 2 cut(s) 345, 841
Eco52I CGGCCG 1 cut(s) 313
Eco53kI GAGCTC 1 cut(s) 328
Eco57I CTGAAG 3 cut(s) 600, 865, 1054
EcoICRI GAGCTC 1 cut(s) 328
EcoO109I RGGNCCY 1 cut(s) 345
EcoRII CCWGG 2 cut(s) 284, 854
EcoT14I CCWWGG 2 cut(s) 210, 402
EcoT38I GRGCYC 2 cut(s) 87, 330
ErhI CCWWGG 2 cut(s) 210, 402
FalI AAGNNNNNCTT 2 cut(s) 573, 605
FaqI GGGAC 2 cut(s) 331, 1045
FauI CCCGC 1 cut(s) 335
Fnu4HI GCNGC 7 cut(s) 31, 316, 922, 1134, 1156, 1176, 1461
FokI GGATG 4 cut(s) 112, 487, 695, 1482
FriOI GRGCYC 2 cut(s) 87, 330
Fsp4HI GCNGC 7 cut(s) 31, 316, 922, 1134, 1156, 1176, 1461
FspBI CTAG 3 cut(s) 938, 1166, 1448
GlaI GCGC 1 cut(s) 1105
GluI GCNGC 7 cut(s) 31, 316, 922, 1134, 1156, 1176, 1461
GsuI CTGGAG 1 cut(s) 268
HaeIII GGCC 9 cut(s) 270, 315, 396, 462, 558, 1146, 1170, 1342, 1452
HapII CCGG 4 cut(s) 267, 339, 375, 1548
HhaI GCGC 1 cut(s) 1106
Hin6I GCGC 1 cut(s) 1104
HinP1I GCGC 1 cut(s) 1104
HindIII AAGCTT 2 cut(s) 429, 1066
HinfI GANTC 3 cut(s) 74, 385, 895
HpaII CCGG 4 cut(s) 267, 339, 375, 1548
HphI GGTGA 4 cut(s) 47, 256, 364, 1210
Hpy166II GTNNAC 4 cut(s) 632, 844, 1080, 1224
Hpy188III TCNNGA 2 cut(s) 961, 1421
Hpy8I GTNNAC 4 cut(s) 632, 844, 1080, 1224
Hpy99I CGWCG 1 cut(s) 359
HpyAV CCTTC 3 cut(s) 30, 626, 722
HpyCH4III ACNGT 2 cut(s) 481, 1003
HpyF3I CTNAG 8 cut(s) 76, 624, 656, 776, 1064, 1325, 1527, 1554
HspAI GCGC 1 cut(s) 1104
KflI GGGWCCC 1 cut(s) 345
KroI GCCGGC 1 cut(s) 338
KroNI GCCGGC 1 cut(s) 340
Kzo9I GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
LguI GCTCTTC 2 cut(s) 75, 311
LmnI GCTCC 1 cut(s) 1352
Lsp1109I GCAGC 6 cut(s) 17, 908, 1145, 1167, 1187, 1447
LweI GCATC 2 cut(s) 768, 1460
MaeI CTAG 3 cut(s) 938, 1166, 1448
MaeIII GTNAC 2 cut(s) 377, 1504
MalI GATC 6 cut(s) 110, 296, 959, 1025, 1043, 1184
MboI GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
MfeI CAATTG 1 cut(s) 570
MhlI GDGCHC 3 cut(s) 87, 330, 1480
MlsI TGGCCA 1 cut(s) 558
MluNI TGGCCA 1 cut(s) 558
MlyI GAGTC 2 cut(s) 68, 889
MmeI TCCRAC 2 cut(s) 1330, 1407
Mox20I TGGCCA 1 cut(s) 558
MroNI GCCGGC 1 cut(s) 338
MscI TGGCCA 1 cut(s) 558
MseI TTAA 4 cut(s) 69, 815, 986, 1250
MslI CAYNNNNRTG 4 cut(s) 407, 929, 1468, 1490
Msp20I TGGCCA 1 cut(s) 558
MspA1I CMGCKG 1 cut(s) 1543
MspI CCGG 4 cut(s) 267, 339, 375, 1548
MspR9I CCNGG 3 cut(s) 286, 856, 1549
MunI CAATTG 1 cut(s) 570
Mva1269I GAATGC 1 cut(s) 1395
MvaI CCWGG 2 cut(s) 286, 856
NaeI GCCGGC 1 cut(s) 340
NciI CCSGG 1 cut(s) 1549
NcoI CCATGG 1 cut(s) 402
NdeII GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
NgoMIV GCCGGC 1 cut(s) 338
NlaIV GGNNCC 5 cut(s) 346, 347, 414, 439, 842
NmeAIII GCCGAG 2 cut(s) 291, 300
NspI RCATGY 2 cut(s) 1222, 1667
PagI TCATGA 1 cut(s) 960
PceI AGGCCT 4 cut(s) 1146, 1170, 1342, 1452
PciI ACATGT 1 cut(s) 1663
PciSI GCTCTTC 2 cut(s) 75, 311
PctI GAATGC 1 cut(s) 1395
PdiI GCCGGC 1 cut(s) 340
PfeI GAWTC 1 cut(s) 385
PinAI ACCGGT 1 cut(s) 374
PkrI GCNGC 7 cut(s) 32, 317, 923, 1135, 1157, 1177, 1462
PleI GAGTC 2 cut(s) 68, 889
PpsI GAGTC 2 cut(s) 68, 889
PpuMI RGGWCCY 1 cut(s) 345
PscI ACATGT 1 cut(s) 1663
Psp124BI GAGCTC 1 cut(s) 330
Psp5II RGGWCCY 1 cut(s) 345
Psp6I CCWGG 2 cut(s) 284, 854
PspGI CCWGG 2 cut(s) 284, 854
PspN4I GGNNCC 5 cut(s) 346, 347, 414, 439, 842
PspPI GGNCC 2 cut(s) 345, 841
PspPPI RGGWCCY 1 cut(s) 345
PstNI CAGNNNCTG 2 cut(s) 1400, 1441
PvuII CAGCTG 1 cut(s) 1543
RsaI GTAC 2 cut(s) 483, 746
RsaNI GTAC 2 cut(s) 482, 745
RseI CAYNNNNRTG 4 cut(s) 407, 929, 1468, 1490
SacI GAGCTC 1 cut(s) 330
SapI GCTCTTC 2 cut(s) 75, 311
SaqAI TTAA 4 cut(s) 69, 815, 986, 1250
SatI GCNGC 7 cut(s) 31, 316, 922, 1134, 1156, 1176, 1461
Sau3AI GATC 6 cut(s) 108, 294, 957, 1023, 1041, 1182
Sau96I GGNCC 2 cut(s) 345, 841
ScaI AGTACT 1 cut(s) 483
SchI GAGTC 2 cut(s) 68, 889
ScrFI CCNGG 3 cut(s) 286, 856, 1549
SduI GDGCHC 3 cut(s) 87, 330, 1480
SfaNI GCATC 2 cut(s) 768, 1460
SinI GGWCC 2 cut(s) 345, 841
SmiMI CAYNNNNRTG 4 cut(s) 407, 929, 1468, 1490
SmlI CTYRAG 1 cut(s) 1421
SmoI CTYRAG 1 cut(s) 1421
SseBI AGGCCT 4 cut(s) 1146, 1170, 1342, 1452
SsiI CCGC 2 cut(s) 316, 342
SspI AATATT 1 cut(s) 495
SspMI CTAG 3 cut(s) 938, 1166, 1448
SstI GAGCTC 1 cut(s) 330
StuI AGGCCT 4 cut(s) 1146, 1170, 1342, 1452
StyD4I CCNGG 3 cut(s) 284, 854, 1547
StyI CCWWGG 2 cut(s) 210, 402
TaaI ACNGT 2 cut(s) 481, 1003
TaqI TCGA 1 cut(s) 383
TatI WGTACW 1 cut(s) 481
TauI GCSGC 1 cut(s) 318
TfiI GAWTC 1 cut(s) 385
Tru1I TTAA 4 cut(s) 69, 815, 986, 1250
Tru9I TTAA 4 cut(s) 69, 815, 986, 1250
TscAI CASTG 5 cut(s) 632, 918, 1006, 1078, 1401
TseI GCWGC 6 cut(s) 30, 921, 1133, 1155, 1175, 1460
TspDTI ATGAA 3 cut(s) 548, 579, 1150
TspRI CASTG 5 cut(s) 632, 918, 1006, 1078, 1401
VpaK11BI GGWCC 2 cut(s) 345, 841
XapI RAATTY 1 cut(s) 648
XceI RCATGY 2 cut(s) 1222, 1667
XspI CTAG 3 cut(s) 938, 1166, 1448
ZrmI AGTACT 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.