MD02G1082400.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
6451169 .. 6455154
3986 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1082400.v1.1.491

Sequence Viewer

Length: 1401 bp
ATGGAACCTCGCGTTGGGAATAAGTTTCGGCTCGGCCGGAAGATCGGCAGCGGCTCGTTCGGAGAGATCTATCTGGGTACAAATATTCAGACGAACGAAGAGGTCGCGATTAAGCTTGAAAATGTGAAGACAAAACACCCTCAGCTGCTGTACGAATCCAAGTTATACAGGATCCTAGCAGGAGGAACTGGGATTCCAAATGTGAGGTGGTTTGGAGTTGAAGGAGACTATAACGTTTTGGTTATGGATTTACTGGGCCCTAGTCTTGAAGACTTATTTAACTTCTGCAGTAGGAAACTTTCTTTGAAGACCGTTCTTATGCTGGCTGATCAAATGATCAGTCGTGTTGAATTTGTTCACAGTAAGTCATTTCTACATCGAGATATCAAGCCAGACAATTTTCTTATGGGCTTGGGAAGGCGTGCAAATCAGGTGTACATGATAGACTTTGGTCTGGCTAAGAAATACAGAGATAGTACAACCCGTCAGCATATTCCTTATAGGGAAAACAAGAATTTGACTGGAACTGCAAGATATGCAAGCATGAACACTCACCTTGGAATTGAGCAAAGCCGGAGGGATGATTTAGAATCTCTTGGTTATGTCCTTATGTATTTCCTTAGAGGAAGTCTTCCTTGGCAGGGACTAAAAGCGGGAACTAAGAAGCAGAAGTATGAGAGAATTAGTGAAAAAAAGGTTTCTACTTCAATTGAGGCGTTATGTCGGGGTTATCCGACAGAGTTTGCTTCGTATTTCCATTACTGTCGCTCTCTACGGTTCGATGATAAGCCAGACTATGTTTATTTAAAAAAAATATTCCGGGATGTCTTTATTCGTGAAGGCTTTCAGTTTGATTATGTGTTTGACTGGACAATTTTGAAGTATCAGCAATCACAGCTGGCTGTTCCTCCAACCCGTGCCCTTGCTGGTGCTGGAACAAGTTCTGGGATGCCCCATGCTGCTGTTAATGCGGACAGACTGACAGGTGAGGTAGACGGGCGGCCAACTGGTCTAACATCATTGGATTCCTCTCGGCGGAGAATACCTGGACCGGCTCTCAATTCCATGAGCCTTTCGAGGCAGAAGAATCCAATTGCGAATGATGCTTCATTAACCAGAGAGACGTCAAATAGCAACATGTTTGGCCGGTCAGCCGGATCATCAAGGAGAGTTGCTGTTTCTAGCAGCCGTGATGCATTTGGCGGAAGTGAGTCTGACATTCGCCCTCGAACAACCGATGCTAGCCCTGGAGGACACAGAATTTCAAGTGGCCGAAGAAGTTCACCAGTCGAGTCATCGGACCCCACCCGGAGACATACATCTCAGACTAGGAACTACGAGACTACCCTTAAAGGCATCGAAGGTCTGCATTTAGACAATGAAGAGAGGGTTCATTATTAG

Protein Analysis

467

Amino Acids

52.62

Weight (kDa)

9.71

Isoelectric Point (pI)

47.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 10 - 224 9.2e-26 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 231 5.9e-15 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 108 - 206 1.2e-08 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1127
AccI GTMKAC 1 cut(s) 993
AccII CGCG 2 cut(s) 12, 107
AciI CCGC 6 cut(s) 51, 653, 971, 1000, 1036, 1203
AclI AACGTT 1 cut(s) 234
AclWI GGATC 3 cut(s) 166, 179, 1165
AcoI YGGCCR 4 cut(s) 34, 1001, 1144, 1270
AcsI RAATTY 3 cut(s) 350, 514, 1260
AcyI GRCGYC 1 cut(s) 1124
AfaI GTAC 4 cut(s) 79, 152, 437, 478
AfiI CCNNNNNNNGG 3 cut(s) 14, 641, 1035
AflIII ACRYGT 1 cut(s) 1137
AgsI TTSAA 8 cut(s) 119, 221, 269, 307, 350, 708, 880, 1266
AjnI CCWGG 2 cut(s) 1045, 1246
AjuI GAANNNNNNNTTGG 3 cut(s) 29, 619, 651
AloI GAACNNNNNNTCC 2 cut(s) 178, 210
AluBI AGCT 3 cut(s) 115, 145, 898
AluI AGCT 3 cut(s) 115, 145, 898
Alw26I GTCTC 4 cut(s) 219, 1115, 1306, 1334
AlwI GGATC 3 cut(s) 166, 179, 1165
AlwNI CAGNNNCTG 1 cut(s) 148
AoxI GGCC 5 cut(s) 34, 256, 1001, 1144, 1270
ApaI GGGCCC 1 cut(s) 260
ApeKI GCWGC 4 cut(s) 48, 145, 959, 1185
ApoI RAATTY 3 cut(s) 350, 514, 1260
ArsI GACNNNNNNTTYG 2 cut(s) 325, 357
Asp700I GAANNNNTTC 4 cut(s) 354, 843, 940, 1279
AspS9I GGNCC 4 cut(s) 256, 257, 1049, 1300
AsuC2I CCSGG 2 cut(s) 821, 1309
AsuHPI GGTGA 3 cut(s) 545, 998, 1275
AsuNHI GCTAGC 1 cut(s) 1241
AvaII GGWCC 2 cut(s) 1049, 1300
BaeGI GKGCMC 2 cut(s) 260, 922
BamHI GGATCC 1 cut(s) 171
BanII GRGCYC 1 cut(s) 260
BbsI GAAGAC 4 cut(s) 134, 276, 314, 623
BbvCI CCTCAGC 1 cut(s) 141
BbvI GCAGC 4 cut(s) 60, 132, 946, 1197
BceAI ACGGC 1 cut(s) 1173
BciT130I CCWGG 2 cut(s) 1047, 1248
BclI TGATCA 2 cut(s) 328, 336
BcnI CCSGG 2 cut(s) 821, 1309
BcoDI GTCTC 4 cut(s) 219, 1115, 1306, 1334
BfaI CTAG 5 cut(s) 176, 261, 1182, 1242, 1329
BfmI CTRYAG 1 cut(s) 286
BglII AGATCT 1 cut(s) 66
BisI GCNGC 6 cut(s) 49, 52, 146, 960, 1001, 1186
BlsI GCNGC 6 cut(s) 50, 53, 147, 961, 1002, 1187
Bme1390I CCNGG 4 cut(s) 821, 1047, 1248, 1309
Bme18I GGWCC 2 cut(s) 1049, 1300
BmgT120I GGNCC 4 cut(s) 256, 257, 1049, 1300
BmiI GGNNCC 4 cut(s) 6, 173, 258, 1302
BmrFI CCNGG 4 cut(s) 821, 1047, 1248, 1309
BmrI ACTGGG 2 cut(s) 198, 263
BmsI GCATC 5 cut(s) 939, 1093, 1183, 1228, 1365
BmtI GCTAGC 1 cut(s) 1245
BmuI ACTGGG 2 cut(s) 198, 263
BoxI GACNNNNGTC 1 cut(s) 450
BpiI GAAGAC 4 cut(s) 134, 276, 314, 623
BpmI CTGGAG 1 cut(s) 1269
Bpu10I CCTNAGC 1 cut(s) 141
BpuMI CCSGG 2 cut(s) 821, 1309
BsaHI GRCGYC 1 cut(s) 1124
BsaJI CCNNGG 3 cut(s) 556, 635, 1246
Bsc4I CCNNNNNNNGG 3 cut(s) 14, 641, 1035
Bse118I RCCGGY 2 cut(s) 1051, 1146
Bse1I ACTGG 6 cut(s) 193, 258, 526, 872, 1012, 1286
BseBI CCWGG 2 cut(s) 1047, 1248
BseDI CCNNGG 3 cut(s) 556, 635, 1246
BseGI GGATG 3 cut(s) 586, 829, 954
BseLI CCNNNNNNNGG 3 cut(s) 14, 641, 1035
BseMII CTCAG 2 cut(s) 155, 1337
BseNI ACTGG 6 cut(s) 193, 258, 526, 872, 1012, 1286
BseSI GKGCMC 2 cut(s) 260, 922
BseX3I CGGCCG 1 cut(s) 34
BseXI GCAGC 4 cut(s) 60, 132, 946, 1197
Bsh1236I CGCG 2 cut(s) 12, 107
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 5 cut(s) 36, 258, 1003, 1146, 1272
BsiEI CGRYCG 1 cut(s) 37
BsiSI CCGG 7 cut(s) 37, 574, 820, 1052, 1147, 1155, 1309
BslFI GGGAC 1 cut(s) 657
BslI CCNNNNNNNGG 3 cut(s) 14, 641, 1035
BsmAI GTCTC 4 cut(s) 219, 1115, 1306, 1334
BsmBI CGTCTC 1 cut(s) 1115
BsmFI GGGAC 1 cut(s) 657
BsnI GGCC 5 cut(s) 36, 258, 1003, 1146, 1272
Bsp120I GGGCCC 1 cut(s) 256
Bsp1286I GDGCHC 2 cut(s) 260, 922
Bsp1407I TGTACA 1 cut(s) 435
Bsp143I GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
Bsp68I TCGCGA 1 cut(s) 107
BspACI CCGC 6 cut(s) 51, 653, 971, 1000, 1036, 1203
BspANI GGCC 5 cut(s) 36, 258, 1003, 1146, 1272
BspCNI CTCAG 2 cut(s) 154, 1336
BspFNI CGCG 2 cut(s) 12, 107
BspLI GGNNCC 4 cut(s) 6, 173, 258, 1302
BspMAI CTGCAG 1 cut(s) 290
BspOI GCTAGC 1 cut(s) 1245
BspPI GGATC 3 cut(s) 166, 179, 1165
BsrFI RCCGGY 2 cut(s) 1051, 1146
BsrGI TGTACA 1 cut(s) 435
BsrI ACTGG 6 cut(s) 193, 258, 526, 872, 1012, 1286
BssAI RCCGGY 2 cut(s) 1051, 1146
BssECI CCNNGG 3 cut(s) 556, 635, 1246
BssMI GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
BssNI GRCGYC 1 cut(s) 1124
BssT1I CCWWGG 2 cut(s) 556, 635
Bst2UI CCWGG 2 cut(s) 1047, 1248
Bst4CI ACNGT 4 cut(s) 313, 362, 764, 777
Bst6I CTCTTC 2 cut(s) 93, 1377
BstACI GRCGYC 1 cut(s) 1124
BstAPI GCANNNNNTGC 1 cut(s) 536
BstAUI TGTACA 1 cut(s) 435
BstC8I GCNNGC 5 cut(s) 324, 423, 541, 900, 1243
BstDEI CTNAG 5 cut(s) 141, 459, 620, 660, 1323
BstF5I GGATG 3 cut(s) 586, 829, 954
BstFNI CGCG 2 cut(s) 12, 107
BstKTI GATC 6 cut(s) 45, 69, 174, 331, 339, 1160
BstMAI GTCTC 4 cut(s) 219, 1115, 1306, 1334
BstMBI GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 4 cut(s) 536, 895, 968, 1103
BstNI CCWGG 2 cut(s) 1047, 1248
BstNSI RCATGY 1 cut(s) 1141
BstPAI GACNNNNGTC 1 cut(s) 450
BstSCI CCNGG 4 cut(s) 819, 1045, 1246, 1307
BstSFI CTRYAG 1 cut(s) 286
BstSLI GKGCMC 2 cut(s) 260, 922
BstUI CGCG 2 cut(s) 12, 107
BstV1I GCAGC 4 cut(s) 60, 132, 946, 1197
BstV2I GAAGAC 4 cut(s) 134, 276, 314, 623
BstX2I RGATCY 2 cut(s) 66, 171
BstYI RGATCY 2 cut(s) 66, 171
BstZI CGGCCG 1 cut(s) 34
BsuRI GGCC 5 cut(s) 36, 258, 1003, 1146, 1272
BtsCI GGATG 3 cut(s) 586, 829, 954
BtuMI TCGCGA 1 cut(s) 107
Cac8I GCNNGC 5 cut(s) 324, 423, 541, 900, 1243
CaiI CAGNNNCTG 1 cut(s) 148
Cfr10I RCCGGY 2 cut(s) 1051, 1146
Cfr13I GGNCC 4 cut(s) 256, 257, 1049, 1300
Csp6I GTAC 4 cut(s) 78, 151, 436, 477
CviAII CATG 5 cut(s) 439, 544, 956, 1066, 1138
CviQI GTAC 4 cut(s) 78, 151, 436, 477
DdeI CTNAG 5 cut(s) 141, 459, 620, 660, 1323
DpnI GATC 6 cut(s) 44, 68, 173, 330, 338, 1159
DpnII GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
DraI TTTAAA 1 cut(s) 807
EaeI YGGCCR 4 cut(s) 34, 1001, 1144, 1270
EagI CGGCCG 1 cut(s) 34
Eam1104I CTCTTC 2 cut(s) 93, 1377
EarI CTCTTC 2 cut(s) 93, 1377
EciI GGCGGA 2 cut(s) 1051, 1218
EclXI CGGCCG 1 cut(s) 34
Eco130I CCWWGG 2 cut(s) 556, 635
Eco24I GRGCYC 1 cut(s) 260
Eco32I GATATC 1 cut(s) 385
Eco47I GGWCC 2 cut(s) 1049, 1300
Eco52I CGGCCG 1 cut(s) 34
EcoO109I RGGNCCY 1 cut(s) 257
EcoRII CCWGG 2 cut(s) 1045, 1246
EcoRV GATATC 1 cut(s) 385
EcoT14I CCWWGG 2 cut(s) 556, 635
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 1 cut(s) 260
ErhI CCWWGG 2 cut(s) 556, 635
Esp3I CGTCTC 1 cut(s) 1115
FaeI CATG 5 cut(s) 442, 547, 959, 1069, 1141
FalI AAGNNNNNCTT 2 cut(s) 619, 651
FaqI GGGAC 1 cut(s) 657
FatI CATG 5 cut(s) 438, 543, 955, 1065, 1137
FauI CCCGC 1 cut(s) 646
FbaI TGATCA 2 cut(s) 328, 336
FblI GTMKAC 1 cut(s) 993
Fnu4HI GCNGC 6 cut(s) 49, 52, 146, 960, 1001, 1186
FokI GGATG 3 cut(s) 593, 836, 961
FriOI GRGCYC 1 cut(s) 260
Fsp4HI GCNGC 6 cut(s) 49, 52, 146, 960, 1001, 1186
FspBI CTAG 5 cut(s) 176, 261, 1182, 1242, 1329
GluI GCNGC 6 cut(s) 49, 52, 146, 960, 1001, 1186
GsuI CTGGAG 1 cut(s) 1269
HaeIII GGCC 5 cut(s) 36, 258, 1003, 1146, 1272
HapII CCGG 7 cut(s) 37, 574, 820, 1052, 1147, 1155, 1309
Hin1I GRCGYC 1 cut(s) 1124
Hin1II CATG 5 cut(s) 442, 547, 959, 1069, 1141
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 7 cut(s) 155, 193, 590, 1025, 1087, 1211, 1292
HpaII CCGG 7 cut(s) 37, 574, 820, 1052, 1147, 1155, 1309
HphI GGTGA 3 cut(s) 545, 998, 1275
Hpy166II GTNNAC 4 cut(s) 358, 436, 994, 1283
Hpy188I TCNGA 6 cut(s) 62, 90, 735, 1216, 1300, 1326
Hpy188III TCNNGA 4 cut(s) 106, 266, 380, 836
Hpy8I GTNNAC 4 cut(s) 358, 436, 994, 1283
HpyAV CCTTC 4 cut(s) 215, 411, 833, 1355
HpyCH4III ACNGT 4 cut(s) 313, 362, 764, 777
HpyCH4IV ACGT 2 cut(s) 234, 1124
HpyCH4V TGCA 6 cut(s) 288, 425, 530, 539, 1196, 1369
HpyF10VI GCNNNNNNNGC 4 cut(s) 536, 895, 968, 1103
HpyF3I CTNAG 5 cut(s) 141, 459, 620, 660, 1323
HpySE526I ACGT 2 cut(s) 234, 1124
Hsp92I GRCGYC 1 cut(s) 1124
Hsp92II CATG 5 cut(s) 442, 547, 959, 1069, 1141
Ksp22I TGATCA 2 cut(s) 328, 336
Kzo9I GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
Lsp1109I GCAGC 4 cut(s) 60, 132, 946, 1197
LweI GCATC 5 cut(s) 939, 1093, 1183, 1228, 1365
MaeI CTAG 5 cut(s) 176, 261, 1182, 1242, 1329
MaeII ACGT 2 cut(s) 234, 1124
MalI GATC 6 cut(s) 44, 68, 173, 330, 338, 1159
MboI GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
MboII GAAGA 9 cut(s) 52, 110, 139, 281, 319, 623, 1096, 1287, 1394
MfeI CAATTG 2 cut(s) 708, 1092
MflI RGATCY 2 cut(s) 66, 171
MhlI GDGCHC 2 cut(s) 260, 922
MlyI GAGTC 2 cut(s) 1220, 1301
MmeI TCCRAC 2 cut(s) 758, 935
Mph1103I ATGCAT 1 cut(s) 1198
MroXI GAANNNNTTC 4 cut(s) 354, 843, 940, 1279
MseI TTAA 6 cut(s) 111, 279, 806, 966, 1112, 1350
MspA1I CMGCKG 3 cut(s) 51, 145, 898
MspI CCGG 7 cut(s) 37, 574, 820, 1052, 1147, 1155, 1309
MspR9I CCNGG 4 cut(s) 821, 1047, 1248, 1309
MunI CAATTG 2 cut(s) 708, 1092
MvaI CCWGG 2 cut(s) 1047, 1248
MvnI CGCG 2 cut(s) 12, 107
MwoI GCNNNNNNNGC 4 cut(s) 536, 895, 968, 1103
NciI CCSGG 2 cut(s) 821, 1309
NdeII GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
NheI GCTAGC 1 cut(s) 1241
NlaIII CATG 5 cut(s) 442, 547, 959, 1069, 1141
NlaIV GGNNCC 4 cut(s) 6, 173, 258, 1302
NmeAIII GCCGAG 2 cut(s) 12, 1012
NruI TCGCGA 1 cut(s) 107
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 1 cut(s) 1141
PciI ACATGT 1 cut(s) 1137
PdmI GAANNNNTTC 4 cut(s) 354, 843, 940, 1279
PfeI GAWTC 5 cut(s) 155, 193, 590, 1025, 1087
PfoI TCCNGGA 1 cut(s) 819
PkrI GCNGC 6 cut(s) 50, 53, 147, 961, 1002, 1187
PleI GAGTC 2 cut(s) 1219, 1300
PpsI GAGTC 2 cut(s) 1219, 1300
PscI ACATGT 1 cut(s) 1137
PshAI GACNNNNGTC 1 cut(s) 450
Psp1406I AACGTT 1 cut(s) 234
Psp6I CCWGG 2 cut(s) 1045, 1246
PspGI CCWGG 2 cut(s) 1045, 1246
PspN4I GGNNCC 4 cut(s) 6, 173, 258, 1302
PspOMI GGGCCC 1 cut(s) 256
PspPI GGNCC 4 cut(s) 256, 257, 1049, 1300
PstI CTGCAG 1 cut(s) 290
PstNI CAGNNNCTG 1 cut(s) 148
PsuI RGATCY 2 cut(s) 66, 171
PvuII CAGCTG 2 cut(s) 145, 898
RruI TCGCGA 1 cut(s) 107
RsaI GTAC 4 cut(s) 79, 152, 437, 478
RsaNI GTAC 4 cut(s) 78, 151, 436, 477
SaqAI TTAA 6 cut(s) 111, 279, 806, 966, 1112, 1350
SatI GCNGC 6 cut(s) 49, 52, 146, 960, 1001, 1186
Sau3AI GATC 6 cut(s) 42, 66, 171, 328, 336, 1157
Sau96I GGNCC 4 cut(s) 256, 257, 1049, 1300
SchI GAGTC 2 cut(s) 1220, 1301
ScrFI CCNGG 4 cut(s) 821, 1047, 1248, 1309
SduI GDGCHC 2 cut(s) 260, 922
SfaNI GCATC 5 cut(s) 939, 1093, 1183, 1228, 1365
SfcI CTRYAG 1 cut(s) 286
SinI GGWCC 2 cut(s) 1049, 1300
SsiI CCGC 6 cut(s) 51, 653, 971, 1000, 1036, 1203
SspI AATATT 2 cut(s) 85, 816
SspMI CTAG 5 cut(s) 176, 261, 1182, 1242, 1329
StyD4I CCNGG 4 cut(s) 819, 1045, 1246, 1307
StyI CCWWGG 2 cut(s) 556, 635
TaaI ACNGT 4 cut(s) 313, 362, 764, 777
TaiI ACGT 2 cut(s) 237, 1127
TaqI TCGA 6 cut(s) 379, 780, 1076, 1228, 1290, 1359
TatI WGTACW 2 cut(s) 435, 476
TauI GCSGC 2 cut(s) 54, 1003
TfiI GAWTC 5 cut(s) 155, 193, 590, 1025, 1087
Tru1I TTAA 6 cut(s) 111, 279, 806, 966, 1112, 1350
Tru9I TTAA 6 cut(s) 111, 279, 806, 966, 1112, 1350
TseI GCWGC 4 cut(s) 48, 145, 959, 1185
TspDTI ATGAA 4 cut(s) 560, 1098, 1382, 1395
VpaK11BI GGWCC 2 cut(s) 1049, 1300
XapI RAATTY 3 cut(s) 350, 514, 1260
XceI RCATGY 1 cut(s) 1141
XcmI CCANNNNNNNNNTGG 1 cut(s) 204
XmiI GTMKAC 1 cut(s) 993
XmnI GAANNNNTTC 4 cut(s) 354, 843, 940, 1279
XspI CTAG 5 cut(s) 176, 261, 1182, 1242, 1329
ZraI GACGTC 1 cut(s) 1125
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.