Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0007577

Physical Location & Seq

Genomic Coordinates Forward (+)

3070858 .. 3078635

Gene Structure 7778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0039400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGACCGGGTTTTGATCCGGACCCGCTCCAGATCCGTAGCTATTAAACGGCGGATCGGGTATCCGTTAATCCGACGGGTACGGATTTGGATCGAGGTCGATCCGATCCGAACCCGATCCATTTACAGGCCTAGTTCTATTGCTGATAATCTTATTTGGAAGCATACTTCTAATGGTGTATTTACTGTTAAAAGTGCGTACATGTGCTCTATTGGTTCTGATCTTACTCCTGATTGTTTTTGGAAGAAAATATGGAGTTTTAATATCCCTCCCAAACTCAAAACCTTTGCTTGGATTCTTGTTCAAGGAAAACTCCTTACCAACTCCCAAAGACTTAGAAGGCATTTAACTACTAATGAGAGTTGTCACTTCTGCCCTGGTATCCCTGAAACCATGCTCCACCTTCTCAGAGATTGTACCCATGCTTCTAAGATTTGGAAGAGCATTGCTATCCCTATAAAAATGAAAGGTACCTTCTGGCTCAATTGGAATGACTGGATTGCTGCTAATCTTCTCCAGAAAGGATGTAAATGGCTTTCCTTTGATTTGAATGAATTTTTCATCATTGTTTGTTGGTACATTTGGAAGTGGAGGAACAAAGGCATCTTTGAGGTTCATTTCACTTTTCCTCATAATCCTAAAGAAATTATTCTGCAGTATGCTACTGAGATTTCTATTGCTTCCAAGCCTAGTATTGAGAATAGGCCCTATAAGGTTGTAACCCTTCATTGGTTGAAACCTGCTGCAAACAATTTCAAATTGAACATTGATGGTTCCAGATCTTATGCAGGAGTGATTGGAGCTGGTGGTCTCATTAGAAACAGTTCTGGTGTTTGGATTAAAGGGTTCACTCACAGTATGGGAGTTGGTGAGATTGTTGAAGCTGAAGCTTGGGGCCTTTACATTGGCTTAAAGCTTGCCCTTGATCTCCACATTAAAAGATTGGAAGTTGAAATTGATTCGGCCATTGTGGTTAATCTCATAAATTCTGGAAATATTGATAGTCACCCTCTTGGGACTCTTATTGCCAATTGCAGAGACATGATACAAGAGTTTGATGTCTGTTCTATCCACCACATCCATAGGGAACGGAACTTTGCAGCGGATATTTTGGCAAAGGATAGTATCAACTTCTCTAGAGGAACAACTTTCTGGGATCAACCTCCCCCTCATACAGTTCAGACCCTCCTTGATGATGTTACTGGCAGTGGCCATACTAGAGTTCATCATGAGATTCAAAAAAGGGAGCAATGTGGAAGTCCTGCAGGATCTTGGTGCTGTGCCAAGATCATCTGCCGTGACGGCTACAAGTATACTGTTAGATATGATGGAGTAGAGGCTGCTAATGATGAGACCATTGTGGAGAGGGTACACAGAACTGCAATTAGGCCTTGCCCTCCTCCACTGGAAGTTACAGAGAATTGGGTTCCTGGTGATGTTGTTGAGGTATTCGACAATTTTTCATGGAAAATGGCCACCATTTCTGAGATTTCGAATTCAAGTTGTAATTTTGAACTGGGTGATCGTGTTGGATTATGGGTTTTATTGGGTTTTTCCAAGTTCAATTTTGCATCTTCTATTCCGTGCGTGGAGGGTTTAGACTGCAGCAAGGCTGAGACAGCAGCAGCAGCAATGTGCATTGGTGTCCCTGACCCTATGGAAGCACGTGGGCTTGCACACTTTCTTGGGCTGTATTTCATAAAGATTGAGGCAGGAAAACCACTTTTGATTAAGATAGATAGTGCAGATAAGTATGGCAATTTACTGGAGCTGGAGGGGCTACTACACTTCCAGCAGCTGCAACATCTGTCTGCCCCTTTTCATTTGGGATTCAGATCTCTCAGTTTTGCGATTCGAGGCCCAGGCTCTTCAATTGCTAGCTGCTTAAGTTCCAACGCACCCTCCTTGCAGCCAGCTCTTGGTAAGAAAATTGAAGCCTTGCCGACAATAGGCCCTTGGTTGCTCCCTTTGACTCCGAACAGATCTCTGATAAATTGTAGGAAAGCTTGTCAACCTATGGAGTTATGGCCATCACCTCCTCTTATTCCTCCCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0008150 GO:0008152 GO:0008360 GO:0009506 GO:0009987 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0030054 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051234 GO:0055044 GO:0065007 GO:0065008 GO:0071704 GO:0098657 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04011 ko04392 map04011 map04392

Pfam Domains

Protein Families

Pkinase

Protein Analysis

685

Amino Acids

77.09

Weight (kDa)

8.9

Isoelectric Point (pI)

42.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	61 - 146	3.7e-17	zinc-binding in reverse transcriptase
RVT_3	PF13456	263 - 374	2.8e-26	Reverse transcriptase-like
Agenet	PF05641	421 - 467	1.2e-09	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26100 AT5G57015
fragaria_vesca	FvH4_1g07860 FvH4_1g07860
malus_domestica	MD02G1082400.v1.1 MD15G1210300.v1.1
prunus_persica	Prupe.3G046000_v2.0.a1 Prupe.7G206400_v2.0.a1
pyrus_communis	pycom02g06530 pycom15g18640
rosa_chinensis	RchiOBHm_Chr2g0093731
rosa_laevigata	RLG00000016433 RLG00000034433
rosa_multiflora	Rmu_co8213396.1_g000001 Rmu_co8410961.1_g000001 Rmu_sc0002126.1_g000006
rosa_roxburghii	Rroxscaffold_2G00147840
rosa_rugosa	Rorug02G0039400
rosa_samantha	Rh2AG086000 Rh2BG086100 Rh2CG088500 Rh2DG084100 Rh2DG455700 Rh5DG001800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	748
Acc65I	GGTACC	1 cut(s)	470
AccB1I	GGYRCC	1 cut(s)	470
AccB7I	CCANNNNNTGG	1 cut(s)	1919
AccBSI	CCGCTC	1 cut(s)	27
AccI	GTMKAC	1 cut(s)	1313
AccIII	TCCGGA	1 cut(s)	18
AciI	CCGC	3 cut(s)	25, 52, 1103
AclWI	GGATC	9 cut(s)	10, 27, 62, 95, 98, 100, 111, 1164, 1276
AcoI	YGGCCR	4 cut(s)	963, 1210, 1473, 2027
AcsI	RAATTY	3 cut(s)	554, 985, 1495
AcuI	CTGAAG	1 cut(s)	906
AcvI	CACGTG	1 cut(s)	1667
AfaI	GTAC	6 cut(s)	81, 200, 418, 472, 578, 1371
AfiI	CCNNNNNNNGG	5 cut(s)	126, 291, 729, 1919, 1949
AflII	CTTAAG	1 cut(s)	1885
AflIII	ACRYGT	1 cut(s)	201
AjnI	CCWGG	3 cut(s)	376, 1429, 1861
Alw21I	GWGCWC	1 cut(s)	209
Alw26I	GTCTC	4 cut(s)	815, 1032, 1346, 1610
AlwI	GGATC	9 cut(s)	10, 27, 62, 95, 98, 100, 111, 1164, 1276
AlwNI	CAGNNNCTG	1 cut(s)	1798
Aor13HI	TCCGGA	1 cut(s)	18
ApoI	RAATTY	3 cut(s)	554, 985, 1495
Asp700I	GAANNNNTTC	2 cut(s)	648, 823
Asp718I	GGTACC	1 cut(s)	470
AspS9I	GGNCC	6 cut(s)	4, 21, 705, 895, 1859, 1952
AsuC2I	CCSGG	2 cut(s)	8, 2052
AsuHPI	GGTGA	5 cut(s)	881, 998, 1445, 1532, 2025
AsuII	TTCGAA	1 cut(s)	1493
AsuNHI	GCTAGC	1 cut(s)	1877
AvaII	GGWCC	2 cut(s)	4, 21
BaeI	ACNNNNGTAYC	2 cut(s)	1037, 1070
BalI	TGGCCA	3 cut(s)	1212, 1475, 2029
BanI	GGYRCC	1 cut(s)	470
BarI	GAAGNNNNNNTAC	2 cut(s)	409, 441
BbrPI	CACGTG	1 cut(s)	1667
Bbv12I	GWGCWC	1 cut(s)	209
BccI	CCATC	3 cut(s)	764, 1322, 2038
BceAI	ACGGC	3 cut(s)	65, 1281, 1318
BciT130I	CCWGG	3 cut(s)	378, 1431, 1863
BciVI	GTATCC	2 cut(s)	72, 392
BcnI	CCSGG	2 cut(s)	8, 2052
BcoDI	GTCTC	4 cut(s)	815, 1032, 1346, 1610
BfaI	CTAG	5 cut(s)	132, 690, 1137, 1218, 1878
BfmI	CTRYAG	3 cut(s)	653, 1263, 1603
BfrI	CTTAAG	1 cut(s)	1885
BfuAI	ACCTGC	1 cut(s)	748
BfuI	GTATCC	2 cut(s)	72, 392
BglI	GCCNNNNNGGC	1 cut(s)	1302
BglII	AGATCT	3 cut(s)	779, 1835, 1982
Bme1390I	CCNGG	5 cut(s)	8, 378, 1431, 1863, 2052
Bme18I	GGWCC	2 cut(s)	4, 21
BmgT120I	GGNCC	6 cut(s)	4, 21, 705, 895, 1859, 1952
BmiI	GGNNCC	5 cut(s)	23, 472, 775, 896, 1428
BmrFI	CCNGG	5 cut(s)	8, 378, 1431, 1863, 2052
BmrI	ACTGGG	1 cut(s)	1526
BmsI	GCATC	2 cut(s)	612, 1580
BmtI	GCTAGC	1 cut(s)	1881
BmuI	ACTGGG	1 cut(s)	1526
BpmI	CTGGAG	4 cut(s)	13, 500, 1787, 1793
Bpu14I	TTCGAA	1 cut(s)	1493
BpuMI	CCSGG	2 cut(s)	8, 2052
BsaAI	YACGTR	1 cut(s)	1667
BsaBI	GATNNNNATC	2 cut(s)	89, 1834
BsaI	GGTCTC	2 cut(s)	815, 1346
BsaJI	CCNNGG	3 cut(s)	376, 1861, 1955
BsaWI	WCCGGW	1 cut(s)	18
BsaXI	ACNNNNNCTCC	2 cut(s)	1886, 1916
Bsc4I	CCNNNNNNNGG	5 cut(s)	126, 291, 729, 1919, 1949
Bse1I	ACTGG	5 cut(s)	500, 1207, 1410, 1521, 1770
Bse3DI	GCAATG	3 cut(s)	444, 1256, 1638
Bse8I	GATNNNNATC	2 cut(s)	89, 1834
BseAI	TCCGGA	1 cut(s)	18
BseBI	CCWGG	3 cut(s)	378, 1431, 1863
BseDI	CCNNGG	3 cut(s)	376, 1861, 1955
BseGI	GGATG	2 cut(s)	530, 1077
BseJI	GATNNNNATC	2 cut(s)	89, 1834
BseLI	CCNNNNNNNGG	5 cut(s)	126, 291, 729, 1919, 1949
BseMI	GCAATG	3 cut(s)	444, 1256, 1638
BseMII	CTCAG	5 cut(s)	421, 657, 1476, 1605, 1855
BseNI	ACTGG	5 cut(s)	500, 1207, 1410, 1521, 1770
BseRI	GAGGAG	2 cut(s)	1389, 2028
BsgI	GTGCAG	1 cut(s)	1764
BshNI	GGYRCC	1 cut(s)	470
BsiHKAI	GWGCWC	1 cut(s)	209
BsiSI	CCGG	3 cut(s)	7, 19, 2052
BslFI	GGGAC	2 cut(s)	1030, 1631
BslI	CCNNNNNNNGG	5 cut(s)	126, 291, 729, 1919, 1949
BsmAI	GTCTC	4 cut(s)	815, 1032, 1346, 1610
BsmFI	GGGAC	2 cut(s)	1030, 1631
Bso31I	GGTCTC	2 cut(s)	815, 1346
Bsp119I	TTCGAA	1 cut(s)	1493
Bsp1286I	GDGCHC	1 cut(s)	209
Bsp13I	TCCGGA	1 cut(s)	18
BspACI	CCGC	3 cut(s)	25, 52, 1103
BspCNI	CTCAG	5 cut(s)	420, 658, 1477, 1606, 1854
BspEI	TCCGGA	1 cut(s)	18
BspHI	TCATGA	1 cut(s)	1228
BspLI	GGNNCC	5 cut(s)	23, 472, 775, 896, 1428
BspMAI	CTGCAG	3 cut(s)	657, 1267, 1607
BspMI	ACCTGC	1 cut(s)	748
BspOI	GCTAGC	1 cut(s)	1881
BspPI	GGATC	9 cut(s)	10, 27, 62, 95, 98, 100, 111, 1164, 1276
BspQI	GCTCTTC	2 cut(s)	434, 1873
BspT104I	TTCGAA	1 cut(s)	1493
BspT107I	GGYRCC	1 cut(s)	470
BspTI	CTTAAG	1 cut(s)	1885
BspTNI	GGTCTC	2 cut(s)	815, 1346
BsrBI	CCGCTC	1 cut(s)	27
BsrDI	GCAATG	3 cut(s)	444, 1256, 1638
BsrI	ACTGG	5 cut(s)	500, 1207, 1410, 1521, 1770
BssECI	CCNNGG	3 cut(s)	376, 1861, 1955
BssNAI	GTATAC	1 cut(s)	1314
BssT1I	CCWWGG	1 cut(s)	1955
Bst1107I	GTATAC	1 cut(s)	1314
Bst2UI	CCWGG	3 cut(s)	378, 1431, 1863
Bst4CI	ACNGT	5 cut(s)	187, 824, 857, 1177, 1318
Bst6I	CTCTTC	2 cut(s)	434, 1873
BstAFI	CTTAAG	1 cut(s)	1885
BstBAI	YACGTR	1 cut(s)	1667
BstBI	TTCGAA	1 cut(s)	1493
BstC8I	GCNNGC	4 cut(s)	918, 1674, 1879, 1914
BstDEI	CTNAG	7 cut(s)	335, 407, 429, 666, 1485, 1614, 1841
BstF5I	GGATG	2 cut(s)	530, 1077
BstMAI	GTCTC	4 cut(s)	815, 1032, 1346, 1610
BstMWI	GCNNNNNNNGC	4 cut(s)	1302, 1619, 1628, 1777
BstNI	CCWGG	3 cut(s)	378, 1431, 1863
BstNSI	RCATGY	1 cut(s)	205
BstSCI	CCNGG	5 cut(s)	6, 376, 1429, 1861, 2050
BstSFI	CTRYAG	3 cut(s)	653, 1263, 1603
BstX2I	RGATCY	5 cut(s)	32, 779, 1268, 1835, 1982
BstYI	RGATCY	5 cut(s)	32, 779, 1268, 1835, 1982
BstZ17I	GTATAC	1 cut(s)	1314
BsuI	GTATCC	2 cut(s)	72, 392
BtsCI	GGATG	2 cut(s)	530, 1077
BtsI	GCAGTG	1 cut(s)	1213
BtsIMutI	CAGTG	2 cut(s)	1213, 1403
BveI	ACCTGC	1 cut(s)	748
Cac8I	GCNNGC	4 cut(s)	918, 1674, 1879, 1914
CaiI	CAGNNNCTG	1 cut(s)	1798
CciI	TCATGA	1 cut(s)	1228
Cfr13I	GGNCC	6 cut(s)	4, 21, 705, 895, 1859, 1952
Csp6I	GTAC	6 cut(s)	80, 199, 417, 471, 577, 1370
CviAII	CATG	6 cut(s)	202, 394, 422, 1042, 1229, 1464
CviQI	GTAC	6 cut(s)	80, 199, 417, 471, 577, 1370
DdeI	CTNAG	7 cut(s)	335, 407, 429, 666, 1485, 1614, 1841
EaeI	YGGCCR	4 cut(s)	963, 1210, 1473, 2027
Eam1104I	CTCTTC	2 cut(s)	434, 1873
EarI	CTCTTC	2 cut(s)	434, 1873
EciI	GGCGGA	1 cut(s)	67
Eco130I	CCWWGG	1 cut(s)	1955
Eco147I	AGGCCT	2 cut(s)	130, 1390
Eco31I	GGTCTC	2 cut(s)	815, 1346
Eco47I	GGWCC	2 cut(s)	4, 21
Eco57I	CTGAAG	1 cut(s)	906
Eco72I	CACGTG	1 cut(s)	1667
EcoO109I	RGGNCCY	3 cut(s)	705, 895, 1952
EcoRI	GAATTC	1 cut(s)	1495
EcoRII	CCWGG	3 cut(s)	376, 1429, 1861
EcoT14I	CCWWGG	1 cut(s)	1955
ErhI	CCWWGG	1 cut(s)	1955
FaeI	CATG	6 cut(s)	205, 397, 425, 1045, 1232, 1467
FaqI	GGGAC	2 cut(s)	1030, 1631
FatI	CATG	6 cut(s)	201, 393, 421, 1041, 1228, 1463
FauI	CCCGC	1 cut(s)	32
FblI	GTMKAC	1 cut(s)	1313
FokI	GGATG	2 cut(s)	537, 1064
FspBI	CTAG	5 cut(s)	132, 690, 1137, 1218, 1878
GsuI	CTGGAG	4 cut(s)	13, 500, 1787, 1793
HapII	CCGG	3 cut(s)	7, 19, 2052
Hin1II	CATG	6 cut(s)	205, 397, 425, 1045, 1232, 1467
HincII	GTYRAC	1 cut(s)	2012
HindII	GTYRAC	1 cut(s)	2012
HindIII	AAGCTT	3 cut(s)	888, 914, 2004
HinfI	GANTC	7 cut(s)	295, 959, 1018, 1234, 1830, 1852, 1972
HpaII	CCGG	3 cut(s)	7, 19, 2052
HphI	GGTGA	5 cut(s)	881, 998, 1445, 1532, 2025
Hpy166II	GTNNAC	4 cut(s)	849, 1314, 1372, 2012
Hpy188III	TCNNGA	8 cut(s)	19, 30, 230, 517, 777, 990, 1137, 1229
Hpy8I	GTNNAC	4 cut(s)	849, 1314, 1372, 2012
Hpy99I	CGWCG	1 cut(s)	78
HpyAV	CCTTC	4 cut(s)	333, 413, 484, 734
HpyCH4III	ACNGT	5 cut(s)	187, 824, 857, 1177, 1318
HpyCH4IV	ACGT	1 cut(s)	1666
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1302, 1619, 1628, 1777
HpyF3I	CTNAG	7 cut(s)	335, 407, 429, 666, 1485, 1614, 1841
HpySE526I	ACGT	1 cut(s)	1666
Hsp92II	CATG	6 cut(s)	205, 397, 425, 1045, 1232, 1467
Kpn2I	TCCGGA	1 cut(s)	18
KpnI	GGTACC	1 cut(s)	474
LguI	GCTCTTC	2 cut(s)	434, 1873
LmnI	GCTCC	6 cut(s)	32, 402, 800, 1246, 1768, 1968
LweI	GCATC	2 cut(s)	612, 1580
MaeI	CTAG	5 cut(s)	132, 690, 1137, 1218, 1878
MaeII	ACGT	1 cut(s)	1666
MaeIII	GTNAC	6 cut(s)	365, 718, 1004, 1198, 1298, 1411
MbiI	CCGCTC	1 cut(s)	27
MboII	GAAGA	5 cut(s)	256, 451, 503, 1566, 1860
MfeI	CAATTG	3 cut(s)	484, 1030, 1872
MflI	RGATCY	5 cut(s)	32, 779, 1268, 1835, 1982
MhlI	GDGCHC	1 cut(s)	209
MlsI	TGGCCA	3 cut(s)	1212, 1475, 2029
MluNI	TGGCCA	3 cut(s)	1212, 1475, 2029
MlyI	GAGTC	2 cut(s)	1012, 1966
MmeI	TCCRAC	3 cut(s)	97, 1510, 1917
Mox20I	TGGCCA	3 cut(s)	1212, 1475, 2029
MroI	TCCGGA	1 cut(s)	18
MroXI	GAANNNNTTC	2 cut(s)	648, 823
MscI	TGGCCA	3 cut(s)	1212, 1475, 2029
Msp20I	TGGCCA	3 cut(s)	1212, 1475, 2029
MspA1I	CMGCKG	2 cut(s)	1103, 1798
MspCI	CTTAAG	1 cut(s)	1885
MspI	CCGG	3 cut(s)	7, 19, 2052
MspR9I	CCNGG	5 cut(s)	8, 378, 1431, 1863, 2052
MunI	CAATTG	3 cut(s)	484, 1030, 1872
MvaI	CCWGG	3 cut(s)	378, 1431, 1863
MwoI	GCNNNNNNNGC	4 cut(s)	1302, 1619, 1628, 1777
NciI	CCSGG	2 cut(s)	8, 2052
NheI	GCTAGC	1 cut(s)	1877
NlaIII	CATG	6 cut(s)	205, 397, 425, 1045, 1232, 1467
NlaIV	GGNNCC	5 cut(s)	23, 472, 775, 896, 1428
NmuCI	GTSAC	3 cut(s)	365, 1004, 1298
NspI	RCATGY	1 cut(s)	205
NspV	TTCGAA	1 cut(s)	1493
PagI	TCATGA	1 cut(s)	1228
PceI	AGGCCT	2 cut(s)	130, 1390
PciI	ACATGT	1 cut(s)	201
PciSI	GCTCTTC	2 cut(s)	434, 1873
PdmI	GAANNNNTTC	2 cut(s)	648, 823
PfeI	GAWTC	5 cut(s)	295, 959, 1234, 1830, 1852
PflMI	CCANNNNNTGG	1 cut(s)	1919
PleI	GAGTC	2 cut(s)	1012, 1966
PmaCI	CACGTG	1 cut(s)	1667
PmlI	CACGTG	1 cut(s)	1667
PpsI	GAGTC	2 cut(s)	1012, 1966
Ppu21I	YACGTR	1 cut(s)	1667
PscI	ACATGT	1 cut(s)	201
Psp6I	CCWGG	3 cut(s)	376, 1429, 1861
PspCI	CACGTG	1 cut(s)	1667
PspGI	CCWGG	3 cut(s)	376, 1429, 1861
PspN4I	GGNNCC	5 cut(s)	23, 472, 775, 896, 1428
PspPI	GGNCC	6 cut(s)	4, 21, 705, 895, 1859, 1952
PstI	CTGCAG	3 cut(s)	657, 1267, 1607
PstNI	CAGNNNCTG	1 cut(s)	1798
PsuI	RGATCY	5 cut(s)	32, 779, 1268, 1835, 1982
PvuII	CAGCTG	1 cut(s)	1798
RsaI	GTAC	6 cut(s)	81, 200, 418, 472, 578, 1371
RsaNI	GTAC	6 cut(s)	80, 199, 417, 471, 577, 1370
SapI	GCTCTTC	2 cut(s)	434, 1873
Sau96I	GGNCC	6 cut(s)	4, 21, 705, 895, 1859, 1952
SbfI	CCTGCAGG	1 cut(s)	1267
SchI	GAGTC	2 cut(s)	1012, 1966
ScrFI	CCNGG	5 cut(s)	8, 378, 1431, 1863, 2052
SdaI	CCTGCAGG	1 cut(s)	1267
SduI	GDGCHC	1 cut(s)	209
SfaNI	GCATC	2 cut(s)	612, 1580
SfcI	CTRYAG	3 cut(s)	653, 1263, 1603
SfuI	TTCGAA	1 cut(s)	1493
SinI	GGWCC	2 cut(s)	4, 21
SmlI	CTYRAG	1 cut(s)	1885
SmoI	CTYRAG	1 cut(s)	1885
Sse8387I	CCTGCAGG	1 cut(s)	1267
SseBI	AGGCCT	2 cut(s)	130, 1390
SsiI	CCGC	3 cut(s)	25, 52, 1103
SspI	AATATT	1 cut(s)	997
SspMI	CTAG	5 cut(s)	132, 690, 1137, 1218, 1878
StuI	AGGCCT	2 cut(s)	130, 1390
StyD4I	CCNGG	5 cut(s)	6, 376, 1429, 1861, 2050
StyI	CCWWGG	1 cut(s)	1955
TaaI	ACNGT	5 cut(s)	187, 824, 857, 1177, 1318
TaiI	ACGT	1 cut(s)	1669
TaqI	TCGA	5 cut(s)	93, 99, 1452, 1493, 1855
TfiI	GAWTC	5 cut(s)	295, 959, 1234, 1830, 1852
TscAI	CASTG	2 cut(s)	1213, 1410
TseFI	GTSAC	3 cut(s)	365, 1004, 1298
Tsp45I	GTSAC	3 cut(s)	365, 1004, 1298
TspDTI	ATGAA	9 cut(s)	479, 550, 567, 605, 716, 1214, 1452, 1687, 1811
TspGWI	ACGGA	5 cut(s)	25, 54, 97, 1105, 1572
TspRI	CASTG	2 cut(s)	1213, 1410
Van91I	CCANNNNNTGG	1 cut(s)	1919
Vha464I	CTTAAG	1 cut(s)	1885
VpaK11BI	GGWCC	2 cut(s)	4, 21
XapI	RAATTY	3 cut(s)	554, 985, 1495
XbaI	TCTAGA	1 cut(s)	1136
XceI	RCATGY	1 cut(s)	205
XmiI	GTMKAC	1 cut(s)	1313
XmnI	GAANNNNTTC	2 cut(s)	648, 823
XspI	CTAG	5 cut(s)	132, 690, 1137, 1218, 1878

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.