MD02G1171200.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
14839573 .. 14849389
9817 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1171200.v1.1.491

Sequence Viewer

Length: 7503 bp
ATGGCTAATCCCGGAGTCGGTGCCAAGTTTGTGTCAGTGAATCTGAACAAATCCTATGGGCAGCCTTCTCACCATCATCACCATCCACCGCATCATAGCGCTTATGGGACGAACAGGGGGAGGCCCGGTAGTCATGGCAGCGGAGGAATGGTGGTCCTTTCCAGGCCTCGCAGTGCGAACAAAGCTGCTGGGTCGAAGCTTTCTGTTCCACCCCCCTTGAATCTGCCTTCGTTGCGCAAAGAGCACGAGAGATTTGATTCGTTGGGCTCAGGTGGTGGTCCTGCAGGCGGAGGGGCTGCAGGTAGTGGGGCGAGGCCTACTTCATCTGGTGTGGGGTGGACGAAGCCTACTGCCGTTGCTTTGCAAGAGAAAGAAGGGGGTGGGGATCATGGAGGAGCTGATGATGCAAATGACCAGACTTTGCATGGTGTTGATGGGGTGAGTAGGGGGAACAGTGTGGGGAGCAGTGTATATATGCCACCTTCAGCTCGGCCTGGCTCAGTGGGATCTCTCCCTACTCCTGCATATCAATCGGCTGAGAAAGCACTGCTCTTGAGGGGCGAGGATTTCCCTTCTTTGCAGGCTGCTTTACCTTCTTCGTCAGGGCCTTCACAAAAGTCAAAGGACGGTTTGAATCAGAAACAGAGGCAAGCTGTCCGTGATGAATTGTTGAATGAGCAGAGCGATAGTAGTCATTCTAGTTTTCTTGTTGACATGCGGCCTCAATTGCAGACTTCTCGTCATGGTGGACAGAATGAGAATGGCAGTGAAAGTAAGGGTTTGGGTGGTGATCGAGCATCAGAGCAAGTAAGGAAGCAGGATGAGTATTTTCCAGGTCCATTGCCACTAGTACGGTTGAACCCAAGATCAGATTGGGCGGATGATGAGCGTGATACAAGTCAAGGTTTTACAGATCGGGGCAGAGATCACGGGTACTCAAAAACTGAAGCTTATTGGGATAGAGATTTTGATATGCCCAGAATAAGTGTTCTACCACACAAGCCAGTTCATAACCCTACGGAGAGGTGGGGTCCGCGTGACAGTGAAGCTGGAAAGGTTTCTTCCAGCGAAGTCCCTAAGGTGGACCCATACGGCAGAGATGTAAGAACACCTAGTAGAGAAGGAAGGGAAGGGAACTCATGGAGAAATACCACATTTCTGAAAGATGGAAATAGTGGTCAAGTTGGAAATGACAGGAGTGGTTTTGGTGCAAGGCCATCGAGTTTAAACAGAGAAACAAGCAAGGATAATAAGTATAGTCTGACATCTGTTCAAGAAGATAATTTTGTAAGGAGGGATGGATATAGACAAGGAGGGAGACAGCCTTGGAACAATTCTACAGACTCATATACAAGCAGAGGGCCTGAATGGAATAAATGTGACCGGTATGGCAGTGAACAACAAAATAGATACAGGGGTGATGCTTTACAGAGTAGCTCAGCATCCAAACTCTCATACTCTGTAGGTGGTAAAGGGCTTCCTGTCAATGATCCACTGCTCAATTTTGGTAGGGATAAGCGCCCATTCTCGAAGAGTGAAAAACCTTATGTAGATGATCCTTTCATGAAAGACTTTGGAGGTACTGGTTTTGACAGCCGGGAACCCTTCTCTGCCGGTCTTTTTGGAGTGGTTAAGAAGAAGAAAGATGTGATTAAACAAACTGATTTTCATGACCCTGTTAGGGAATCTTTTGAGGCTGAACTTGAGAGAGTTCAGAAAATGCAAGAACAGGAGCGACAGCAGATCATCGAGGAACAAGAAAGAGCTGTGGAGCTAGCTCGAAGAGAAGAAGAGGAGAGAACACGGATGGCTAGGGAGCAAGAAGAAAGGCAGAGAAGGATGGAAGAAGAAGCTAGGGAATCAGCGTGGAGAGCAGAACAAGAACAACTTGATGCCATGCGAAGAGCCGAAGAGCAGAGATTAGCCAGGGAAGAGGAGAAACGGAGGTTGTTTTTGGAGGAAGAAAGGAGGAAGCATGCTGCTAAGCAGAAGCTTTTAGAATTGGAGGAAAGGATTGCCAAGAGGAAGGCTGAAACAGGAAAGACTGGTGGTAATTCTTTGGCTGATGCAGATGAGAAAATGTCTAGGATGGAGAAAGAAAAAGATGCCTCCAGGGCAGCAGACATGGGTGACTGGGAGGATGGTGAAAGAATGGTGGAGAGGATCACAGCCTCTGCATCTTCTGATTCAAGTTTGAACAGGTCCTTTGAGATGGGTTCTAGGTCTCATTATTCTAGAGATAGTTCTCCTTTTGTGGACAGGGGAAAACCCGTTAATTCATGGAGAAGAGATGTGTATGAGAATGGGAGCAGCTCAAGTTTACTTCTACAACACCTGGATAATGGCCATCATAGTCCCAGGCGAGATTCATCTGTTGGTGGGAGAGCTCCTTTAAGGGAAGAGTTCTATGGAGGTAGTGGATTCATGTCTTCTAGCACTTACGACAAAGGGGGGATTTCTGAACCTCTCATAGATGATATCACTCATTTAAGGGGGCAGAGGTGGAACCTTTCTGGCGATGGGGATCATTATAGCAGAAACATGGAGATTGAGTCTGAATTCCATGATAAACTTGTTGAAAAGTTTAGTGATGCTGGATGGGGGCAGGGACGTGTCCATGGCAATCCTTATTCTCCTTACCCTGAACAATCATATCCAAATTCTGATGCAGATGGGCCTTATTCCTTTAATAGGTCGCGGTATTCCATGAGGCAGCCTCGTGTTCTTCCACCGCCATCACTGGCTTCCATGCACAAAACCTCCTACAGGGGTGACATTAACCGTCCTGGCCCCTCAGCTTTTCTAGACAATGAGACCCAGTACGATCATGCAGCTAGAAGTGAACCTACTGTGCAGACAGGGTATGATACTAATCGTCCTGAGAATATTGGACAACCTGAAATAATTAATGTCAAACAAGAAAACATGGGGAGTGAGAAGCAGAAACTGGACAGTAACACCACCCCGAGGTGTGACTCGCAATCATCTCTTTCTGTGTCTAGCCCCCCTAGTTCTCCAACTCATCTTTCTCATGATGACTTGGATGAGTCTAGAGATTCTTCAGTGTTATCTGCTCCAGGAGATGGCAAAGAGGTTCCCTTGTCTGGGCAAGAGAATGAACCTCTTGTATTACCTACCAATCCTGGACAAGAGAATGTGATGAATGCGTCTAGTTCTATCTCAACCGGTGATGATGAAGAATGGGCTGTTGAGAACAATGGGCATCTTCAGGAGCAAGAAGAATATGATGAAGATGAAGATGGATACGGGGAGGAAGATGAAGTGCATGAAGTAGATGATGAAAATATTGATCTCACCCAGGAGTTCGATGATGTGCATTTAGAGGAGAAAGGATCCCCTGACATGGACAATTTGGTCCTAGGCTTCAATGAAGGTGTTGAAGTTGGAATGCCAAATGATGAGTTTGAGAGAAGTTCAAGGAATGAAGAAGGTACATTTGTGGTGCCTAAGGTTGCATCTGGAACTGTTGAAGGACTGGGGCCATTTGATGGAATTTGTACTGATGAACCGACCCTTCAACCTATGGATGGGTCCTCCCAAGTGAATGTAGGTAGTTCTTCCAGAATGTTCCAAGAAACTGAGAAGGCAATGCAGAATTTAGTTATTCAGCCTAGTAATGTCTCTCATATGTCACCTGCAACTGAACGCGTGGAACATGTGGATGCTTCTAGTAGTTCTGGGCCATCTTCTCAGCTTCCAGTTACATCTTCAGTTAGCTTTACCTCCCATTTGTTGTCCAGTCAGGCTGTCATGCCTACATTATCTTCTGTTCCTAATCAGACAGAGGGACCTGTTAAGCTTCAGTTTGGGCTGTTTTCTGGTCCATCTCTGATACCATCTCCAGTCCCAGCTATACAAATTGGTTCTATACAGATGCCTCTTCCTCTGCATCCTCAGGTTGGTCCGTCTCTCGCTCACTTGCACCCGTCACAGCCGCTCTTCCAGTTTGGTCAGCTAAGGTATACCTCTCCTATTTCCCAGGGAGTACTGCCTATGGGTCCTCAGTCAATGTCTTTTGTTCAGCCCAATCTTCCGACCGGGTTTTCTTTGAATCAGAGCCCAGGAGGTCCTCTGCCTATTCAAACTGGTCAAGGAATTTCTCAAAATATGAAAAATGATGCTATGTTGAGTTTGGTGAATGATCAACCTGGAGTAACTTGGAGGCACTTGGATGCATCACAAGATAATGTATCAGAAAAGATAAATTCAATGCCCGCCGGAGAAACTGCTGAAACCTCTGTCATGGTGCAGCGGGGACCTGCTGTAACCCATGTTGGTGATAGCAGCTCAAGGTCTGAGTCCGTTTTTCAGGCGGAAGACCAGAGACACAATAATTCGGTTGGGAAAAACTTCGGTGGTTTTTTTGGTACTCGGGAATCTCAAGGTCAGGCTCAAACTGGAGCAGAGCCATCTCAATCAGTTATTAAAGACAAAGATTTTAGTGGGCCAAGGAATCATGGCCCAACATCTGGTGGCAGAGGAAGAAAGTATGTGGTTACAGTTAAAAATTCTGGCTCACGATCATTTCCAGTTGCTGAGCCTTCTCATTTAGAATCTAGTGGGTTTCACAGGAGACCTCGACGCAATATGCAGCGAACTGAGTTTCGAGTTCGAGTAAGTGCTGATAAGAGGCAATCTACAGGGTCTGTATCTTCCAACCATGTTGGACTGGACGAGAAATACGTCTCTGGTAGGGGTTTTGGGCCTTCTGTAAGAAGTGGGCCTAGGAGAGTAGTCTTGTCAAATAAACCATCACAACTGATGTTCGATTCAGAGGGTGTGAGCCCAGGTCCACGTAATTCACAAGAAATAGATTCTGGGAGCAGGGCTGAAAGGGGAGCTGGAAAAGATGCTTCGACAAAGAGTCAGAATGTCCCGCAATCTGGAGAGGGAAATCTTAAAAGAAATATTCATTCTGAAGAAGATGTTTATGCTCCCCTGCAAAGTGGTTTTGTGCGTGTCTTTGAGCAACCTGGCATAGAGGCTCCTAGTGATGAAGACGATTTCATTGAAGTGAGGTCAAAGAGGCAAATGCTGAATGATCGGCGGGAACAGAGAGAAAAGGAAATCAAGGCAAAGTCTCGGGCTTCAAAGGTTCCAAGAAAACCTCGCTCTACTTCAAAAAGTAGTAGTGCCTCTGCTAACTCAGGTAAAAATTATGCACTGGCAAATGGAGAAGGAAACTGCAGTCACTCTGATTTCGTTGCCTCGGAGGGACGTGGATTGAATATGGAAGTATCAGCTGGTTTTAACACTAATGTGGTGTCTCAACTGTTGGCTCCAATTGGCACTCCTGCCGTTAAAAGTGATCCCCAAGCTGATATTAGATCCCACACAATCGGGTCACTGAACACAAGCTCCCTTCCCGTAGTATCAGGTAGTGTGAAAAATCTTGGGCGCGGCTCAATTGTTGACGACAAAAGTAAGGTCCTGGAGAATGTTCAAGCATCTTTGGGCTCATGGGGTAATTCACGGATCAATCAACAGGTTATGTCATTGACACAGACCCAACTTGATGAGGCTATGAAGCCTGGGCAATTTGTGTCTCATGGTTCTGTTGGAAAAATTACTAGCTCAGTTTGTGAATCCAGCATGCCATCTTCATCACTGTTGACAAAGGATAACCCATTTTCTTCTGCTGCAAATCCAATAAATTCTCTGCTTGCTGGCGAGAAAATCCAATTTGGTGCAGTCACGTCTCCAACAATACTTCCTCCTAGCAGCCGCTCTATTTCACATGGAATTGGTCCACCAGGGCCATCTCGGTCAGACATGCAACTCTCCCACAATCTTTCTGCTGCTGAAAATGATTGTGGCCTTCTCTTTGAGAAAGAGAAACACACTGCTGAGTCTTGTGTTTATTTGGAAGATTGTGAATCAGAAGCTGAAGCAGCTGCTTCAGCTGTTGCTGTTGCAGCCATCAGCAGTGACGAAATTGCTGGGAATGGTTTGGTTGCTTGCTCTGGTTCGGTTGCAGATACCAAGACTTTTGGATCTGCTGATGTTGATGGGATAACAGCAGCTGGAGCCGGTGATAAGAAATTAGCCAGTCAATCAAGGACTAAACAGTCTCCAAGTGTTTCCCTTCCAGCAGATCTATCTGTGGAGACCCCAGCAATCTCATTAATGCCACATTTACCAGGTGGAGCTGGTGATCGACAATTTGCCAGTCAATCAAGGGCTGAAGAGGCCCTTAGTGTTTCACTACCAGCAGATCTATCTGTTGAGACCACGCCAATTTCGATGTGGCCACCCTTACCAAGACCTCCAAATTCTTCAGGCCCAATGCTTCCACATTTTCCTGCTGGCCCACCTTCCCATTTTCCCTTTTATGAGATGAATCCCATGATGGGGGGTCCTGTTTTTGCTTTTGGACCGCATGACGAATCTGCATCTACCACCCAAGCACAATCCCAAAAGACTAGTGCGCCAGTTTCAGCACCACTTGGGACGTGGCAGCAATGCCATTCCGGAGTAGATTCATTCTATGGCCCTCCTGCAGGTTTTACTGGTCCTTTTATCGGTCCAGCGGGAGGTATACCAGGTGTTCAAGGCCCTCCACACATGGTTGTTTATAACCATTTTGCACCTGTTGGACAATTTGGACAAGTTGGCTTGAGTTTCATGGGTACTGCTTATATCCCATCAGGAAAGCAGCCTGATTGGAAGCACAACCCTGCATCTTCCACCATGGGGGAGATGAACAATATAAATATGGTTTCTGCACAGCGCAACCCTACCAATATGCCTGCTCCGATCCAGCATTTGGCCCCTGGGTCACCGCTCCTTCCCATGGCTTCACCTTTGGCCATGTTCGATGTTTCTCCTTTCCAGCCTTCTCCTGATATGTCAGCTCAAGCACGGTGGCCCCATGTTCCTGCATCATCTCTTCAGTCTGTTCCTCTATCGATGCCAATGCAGCAACAGACAGACGTTATACTTCCTTCTAAATTTAGCCGTGGTCCTTCTGACCAAACGTTGCCGGCCAACATGTTCCCTGAGTCCCGGACTTCTACATCCTTTGATAGCAGTTGTAATTTTCCTGTGGTTACTGAAGCCACTTCCACCCGATTTCCAGATGAACTGGGTTTAGCAGACCCTACAAGCTCCAGCAGCACTGGGGCTTCAACACAGAATGTTGTCACTAAGAGCTCATCTGTGAGTAGCACGGTAGATAATGCCAAGACTGATGTTGATCAGAATCTTGGTACGAGTGCTAGTGGACATAACGCTAGTAACACCAACTCTCAGTCTTCTATGCACAAGAGTAATATCCCAAACCAGCACTATGGCCATTCGTCTTACCATCAGAGAGGTAATGCTTCGCAGAAAAATAGCTCTGGGGGCGAATGGTCCCACCGACGAATGGGTTACCAAGGAAGGAATCAGTCTCTGGGTGCGGAGAAAAACTTTCCAGGTACTAAGATGAAGCAAATATACGTGGCTAAACAGACCTCAATTGGGAGTTCAACAGCGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2501

Amino Acids

270.18

Weight (kDa)

5.77

Isoelectric Point (pI)

59.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 6597
AarI CACCTGC 1 cut(s) 3664
AasI GACNNNNNNGTC 2 cut(s) 3374, 6088
Acc16I TGCGCA 1 cut(s) 236
Acc36I ACCTGC 4 cut(s) 290, 3664, 4288, 6512
AccB1I GGYRCC 2 cut(s) 20, 3463
AccB7I CCANNNNNTGG 4 cut(s) 3083, 3509, 4490, 6787
AccBSI CCGCTC 3 cut(s) 3958, 5748, 6805
AccI GTMKAC 2 cut(s) 3983, 6559
AccII CGCG 4 cut(s) 1036, 2698, 3669, 5421
AccIII TCCGGA 1 cut(s) 6491
AclI AACGTT 1 cut(s) 6998
AcoI YGGCCR 5 cut(s) 2344, 6269, 6828, 7005, 7312
AfeI AGCGCT 1 cut(s) 100
AflIII ACRYGT 4 cut(s) 2611, 3667, 3676, 7011
AgeI ACCGGT 2 cut(s) 1383, 3185
AhdI GACNNNNNGTC 2 cut(s) 738, 4884
AhlI ACTAGT 2 cut(s) 847, 6443
AjiI CACGTC 4 cut(s) 2612, 5240, 5718, 6474
AjuI GAANNNNNNNTTGG 2 cut(s) 3010, 3042
AleI CACNNNNGTG 1 cut(s) 5279
AloI GAACNNNNNNTCC 2 cut(s) 5363, 5395
Alw21I GWGCWC 3 cut(s) 246, 2389, 7175
AlwNI CAGNNNCTG 7 cut(s) 2174, 2947, 4556, 4667, 5906, 6044, 7414
Ama87I CYCGRG 3 cut(s) 2965, 4392, 5103
Aor13HI TCCGGA 1 cut(s) 6491
Aor51HI AGCGCT 1 cut(s) 100
ArsI GACNNNNNNTTYG 2 cut(s) 5433, 5465
AseI ATTAAT 2 cut(s) 2907, 6146
AsiGI ACCGGT 2 cut(s) 1383, 3185
Asp700I GAANNNNTTC 2 cut(s) 1057, 4370
AspA2I CCTAGG 2 cut(s) 3379, 4745
AspLEI GCGC 6 cut(s) 101, 237, 1521, 5421, 6451, 6753
AsuC2I CCSGG 5 cut(s) 12, 126, 1598, 4060, 7027
AsuNHI GCTAGC 1 cut(s) 1774
AvaI CYCGRG 3 cut(s) 2965, 4392, 5103
AvrII CCTAGG 2 cut(s) 3379, 4745
AxyI CCTNAGG 3 cut(s) 1077, 3468, 3915
BaeI ACNNNNGTAYC 4 cut(s) 1402, 1435, 3444, 3477
BalI TGGCCA 4 cut(s) 2346, 6271, 6830, 7314
BamHI GGATCC 1 cut(s) 3353
BanI GGYRCC 2 cut(s) 20, 3463
BanII GRGCYC 6 cut(s) 269, 2389, 4082, 4808, 5480, 7175
BarI GAAGNNNNNNTAC 4 cut(s) 2830, 2862, 7442, 7474
BauI CACGAG 2 cut(s) 245, 2718
BbsI GAAGAC 4 cut(s) 2421, 4344, 5025, 7266
Bbv12I GWGCWC 3 cut(s) 246, 2389, 7175
BbvCI CCTCAGC 1 cut(s) 2794
BceAI ACGGC 4 cut(s) 338, 1108, 5303, 6963
BcgI CGANNNNNNTGC 8 cut(s) 513, 547, 719, 753, 1200, 1234, 6919, 6953
BciVI GTATCC 1 cut(s) 3257
BclI TGATCA 2 cut(s) 4162, 7216
BcnI CCSGG 5 cut(s) 12, 126, 1598, 4060, 7027
BcuI ACTAGT 2 cut(s) 847, 6443
BfmI CTRYAG 8 cut(s) 282, 297, 1338, 1461, 2764, 4659, 5206, 6519
BfoI RGCGCY 2 cut(s) 102, 1522
BfuAI ACCTGC 4 cut(s) 290, 3664, 4288, 6512
BfuI GTATCC 1 cut(s) 3257
BglI GCCNNNNNGGC 1 cut(s) 2114
BglII AGATCT 2 cut(s) 6115, 6235
BlnI CCTAGG 2 cut(s) 3379, 4745
BlpI GCTNAGC 3 cut(s) 1438, 1983, 4557
BmcAI AGTACT 1 cut(s) 4008
BmeRI GACNNNNNGTC 2 cut(s) 738, 4884
BmeT110I CYCGRG 3 cut(s) 2965, 4392, 5103
BmgBI CACGTC 4 cut(s) 2612, 5240, 5718, 6474
BmrI ACTGGG 5 cut(s) 2143, 2812, 3506, 7115, 7149
BmtI GCTAGC 1 cut(s) 1778
BmuI ACTGGG 5 cut(s) 2143, 2812, 3506, 7115, 7149
BpiI GAAGAC 4 cut(s) 2421, 4344, 5025, 7266
BplI GAGNNNNNCTC 2 cut(s) 2701, 2733
BpmI CTGGAG 9 cut(s) 2095, 3060, 3846, 4191, 4440, 4926, 5474, 6066, 7114
Bpu10I CCTNAGC 3 cut(s) 268, 2794, 3977
Bpu1102I GCTNAGC 3 cut(s) 1438, 1983, 4557
BpuEI CTTGAG 7 cut(s) 574, 1724, 2299, 4294, 4386, 6658, 6861
BpuMI CCSGG 5 cut(s) 12, 126, 1598, 4060, 7027
Bsa29I ATCGAT 1 cut(s) 6929
BsaAI YACGTR 2 cut(s) 4817, 7462
BsaBI GATNNNNATC 4 cut(s) 2523, 2871, 7215, 7221
BsaI GGTCTC 5 cut(s) 2229, 2807, 4588, 6122, 6242
BsaWI WCCGGW 3 cut(s) 1383, 3185, 6491
Bse118I RCCGGY 5 cut(s) 1383, 1613, 3185, 6050, 7003
Bse21I CCTNAGG 3 cut(s) 1077, 3468, 3915
Bse3DI GCAATG 3 cut(s) 839, 3615, 6488
Bse8I GATNNNNATC 4 cut(s) 2523, 2871, 7215, 7221
BseAI TCCGGA 1 cut(s) 6491
BseCI ATCGAT 1 cut(s) 6929
BseJI GATNNNNATC 4 cut(s) 2523, 2871, 7215, 7221
BseMI GCAATG 3 cut(s) 839, 3615, 6488
BseRI GAGGAG 4 cut(s) 408, 1808, 1949, 3359
BseYI CCCAGC 4 cut(s) 188, 3868, 5960, 6133
BsgI GTGCAG 4 cut(s) 2873, 4289, 5730, 6729
Bsh1236I CGCG 4 cut(s) 1036, 2698, 3669, 5421
Bsh1285I CGRYCG 1 cut(s) 4059
BshNI GGYRCC 2 cut(s) 20, 3463
BshTI ACCGGT 2 cut(s) 1383, 3185
BshVI ATCGAT 1 cut(s) 6929
BsiEI CGRYCG 1 cut(s) 4059
BsiHKAI GWGCWC 3 cut(s) 246, 2389, 7175
BsiHKCI CYCGRG 3 cut(s) 2965, 4392, 5103
BsmBI CGTCTC 3 cut(s) 3933, 4711, 5724
BsmI GAATGC 2 cut(s) 3169, 3414
Bso31I GGTCTC 5 cut(s) 2229, 2807, 4588, 6122, 6242
BsoBI CYCGRG 3 cut(s) 2965, 4392, 5103
Bsp1286I GDGCHC 7 cut(s) 246, 269, 2389, 4082, 4808, 5480, 7175
Bsp13I TCCGGA 1 cut(s) 6491
Bsp1720I GCTNAGC 3 cut(s) 1438, 1983, 4557
Bsp19I CCATGG 3 cut(s) 2617, 6711, 6813
BspDI ATCGAT 1 cut(s) 6929
BspEI TCCGGA 1 cut(s) 6491
BspFNI CGCG 4 cut(s) 1036, 2698, 3669, 5421
BspHI TCATGA 4 cut(s) 1563, 1669, 3031, 7499
BspMAI CTGCAG 4 cut(s) 286, 301, 5210, 6523
BspMI ACCTGC 4 cut(s) 290, 3664, 4288, 6512
BspOI GCTAGC 1 cut(s) 1778
BspQI GCTCTTC 3 cut(s) 1897, 1905, 3965
BspT107I GGYRCC 2 cut(s) 20, 3463
BspTNI GGTCTC 5 cut(s) 2229, 2807, 4588, 6122, 6242
BsrBI CCGCTC 3 cut(s) 3958, 5748, 6805
BsrDI GCAATG 3 cut(s) 839, 3615, 6488
BsrFI RCCGGY 5 cut(s) 1383, 1613, 3185, 6050, 7003
BssAI RCCGGY 5 cut(s) 1383, 1613, 3185, 6050, 7003
BssNAI GTATAC 2 cut(s) 3984, 6560
BssSI CACGAG 2 cut(s) 245, 2718
BssT1I CCWWGG 8 cut(s) 1325, 2617, 3379, 4469, 4745, 6711, 6813, 7396
Bst1107I GTATAC 2 cut(s) 3984, 6560
Bst2BI CACGAG 2 cut(s) 245, 2718
BstBAI YACGTR 2 cut(s) 4817, 7462
BstDSI CCRYGG 4 cut(s) 2617, 6711, 6813, 6979
BstEII GGTNACC 2 cut(s) 6798, 7391
BstENI CCTNNNNNAGG 3 cut(s) 2689, 2764, 6519
BstFNI CGCG 4 cut(s) 1036, 2698, 3669, 5421
BstH2I RGCGCY 2 cut(s) 102, 1522
BstHHI GCGC 6 cut(s) 101, 237, 1521, 5421, 6451, 6753
BstMCI CGRYCG 1 cut(s) 4059
BstNSI RCATGY 6 cut(s) 718, 1979, 3680, 5617, 5797, 7015
BstPI GGTNACC 2 cut(s) 6798, 7391
BstSFI CTRYAG 8 cut(s) 282, 297, 1338, 1461, 2764, 4659, 5206, 6519
BstUI CGCG 4 cut(s) 1036, 2698, 3669, 5421
BstV2I GAAGAC 4 cut(s) 2421, 4344, 5025, 7266
BstX2I RGATCY 6 cut(s) 506, 3353, 5348, 6014, 6115, 6235
BstXI CCANNNNNNTGG 1 cut(s) 7310
BstYI RGATCY 6 cut(s) 506, 3353, 5348, 6014, 6115, 6235
BstZ17I GTATAC 2 cut(s) 3984, 6560
Bsu15I ATCGAT 1 cut(s) 6929
Bsu36I CCTNAGG 3 cut(s) 1077, 3468, 3915
BsuI GTATCC 1 cut(s) 3257
BsuTUI ATCGAT 1 cut(s) 6929
BtgI CCRYGG 4 cut(s) 2617, 6711, 6813, 6979
BtgZI GCGATG 1 cut(s) 2532
BtrI CACGTC 4 cut(s) 2612, 5240, 5718, 6474
BtsI GCAGTG 8 cut(s) 178, 472, 545, 772, 1399, 1493, 5862, 5953
BveI ACCTGC 4 cut(s) 290, 3664, 4288, 6512
CaiI CAGNNNCTG 7 cut(s) 2174, 2947, 4556, 4667, 5906, 6044, 7414
CciI TCATGA 4 cut(s) 1563, 1669, 3031, 7499
CfoI GCGC 6 cut(s) 101, 237, 1521, 5421, 6451, 6753
Cfr10I RCCGGY 5 cut(s) 1383, 1613, 3185, 6050, 7003
ClaI ATCGAT 1 cut(s) 6929
CseI GACGC 3 cut(s) 3156, 4611, 7485
CsiI ACCWGGT 2 cut(s) 6160, 6562
CspAI ACCGGT 2 cut(s) 1383, 3185
CspCI CAANNNNNGTGG 4 cut(s) 198, 233, 6866, 6901
DraI TTTAAA 1 cut(s) 1227
DrdI GACNNNNNNGTC 2 cut(s) 3374, 6088
DriI GACNNNNNGTC 2 cut(s) 738, 4884
DseDI GACNNNNNNGTC 2 cut(s) 3374, 6088
EaeI YGGCCR 5 cut(s) 2344, 6269, 6828, 7005, 7312
Eam1105I GACNNNNNGTC 2 cut(s) 738, 4884
EciI GGCGGA 3 cut(s) 303, 893, 4349
Ecl136II GAGCTC 2 cut(s) 2387, 7173
Eco130I CCWWGG 8 cut(s) 1325, 2617, 3379, 4469, 4745, 6711, 6813, 7396
Eco147I AGGCCT 2 cut(s) 166, 316
Eco24I GRGCYC 6 cut(s) 269, 2389, 4082, 4808, 5480, 7175
Eco31I GGTCTC 5 cut(s) 2229, 2807, 4588, 6122, 6242
Eco32I GATATC 1 cut(s) 2479
Eco47III AGCGCT 1 cut(s) 100
Eco53kI GAGCTC 2 cut(s) 2387, 7173
Eco81I CCTNAGG 3 cut(s) 1077, 3468, 3915
Eco88I CYCGRG 3 cut(s) 2965, 4392, 5103
Eco91I GGTNACC 2 cut(s) 6798, 7391
EcoICRI GAGCTC 2 cut(s) 2387, 7173
EcoNI CCTNNNNNAGG 3 cut(s) 2689, 2764, 6519
EcoO65I GGTNACC 2 cut(s) 6798, 7391
EcoRI GAATTC 1 cut(s) 2558
EcoRV GATATC 1 cut(s) 2479
EcoT14I CCWWGG 8 cut(s) 1325, 2617, 3379, 4469, 4745, 6711, 6813, 7396
EcoT22I ATGCAT 1 cut(s) 4198
EcoT38I GRGCYC 6 cut(s) 269, 2389, 4082, 4808, 5480, 7175
ErhI CCWWGG 8 cut(s) 1325, 2617, 3379, 4469, 4745, 6711, 6813, 7396
Esp3I CGTCTC 3 cut(s) 3933, 4711, 5724
FalI AAGNNNNNCTT 4 cut(s) 1872, 1904, 6198, 6230
FauI CCCGC 5 cut(s) 4243, 4266, 4905, 5061, 6544
FauNDI CATATG 1 cut(s) 3648
FbaI TGATCA 2 cut(s) 4162, 7216
FblI GTMKAC 2 cut(s) 3983, 6559
FriOI GRGCYC 6 cut(s) 269, 2389, 4082, 4808, 5480, 7175
FspI TGCGCA 1 cut(s) 236
GlaI GCGC 6 cut(s) 100, 236, 1520, 5420, 6450, 6752
GsaI CCCAGC 4 cut(s) 192, 3872, 5964, 6137
GsuI CTGGAG 9 cut(s) 2095, 3060, 3846, 4191, 4440, 4926, 5474, 6066, 7114
HaeII RGCGCY 2 cut(s) 102, 1522
HgaI GACGC 3 cut(s) 3156, 4611, 7485
HhaI GCGC 6 cut(s) 101, 237, 1521, 5421, 6451, 6753
Hin6I GCGC 6 cut(s) 99, 235, 1519, 5419, 6449, 6751
HinP1I GCGC 6 cut(s) 99, 235, 1519, 5419, 6449, 6751
HincII GTYRAC 3 cut(s) 712, 5434, 5634
HindII GTYRAC 3 cut(s) 712, 5434, 5634
HindIII AAGCTT 4 cut(s) 197, 948, 1991, 3818
Hpy99I CGWCG 2 cut(s) 4605, 7386
HpyCH4IV ACGT 9 cut(s) 2611, 4704, 4816, 5239, 5717, 6473, 6954, 6998, 7461
HpySE526I ACGT 9 cut(s) 2611, 4704, 4816, 5239, 5717, 6473, 6954, 6998, 7461
HspAI GCGC 6 cut(s) 99, 235, 1519, 5419, 6449, 6751
Kpn2I TCCGGA 1 cut(s) 6491
KroI GCCGGC 1 cut(s) 7003
KroNI GCCGGC 1 cut(s) 7005
Ksp22I TGATCA 2 cut(s) 4162, 7216
LguI GCTCTTC 3 cut(s) 1897, 1905, 3965
MabI ACCWGGT 2 cut(s) 6160, 6562
MaeII ACGT 9 cut(s) 2611, 4704, 4816, 5239, 5717, 6473, 6954, 6998, 7461
MbiI CCGCTC 3 cut(s) 3958, 5748, 6805
MfeI CAATTG 4 cut(s) 725, 5304, 5427, 7479
MflI RGATCY 6 cut(s) 506, 3353, 5348, 6014, 6115, 6235
MhlI GDGCHC 7 cut(s) 246, 269, 2389, 4082, 4808, 5480, 7175
MlsI TGGCCA 4 cut(s) 2346, 6271, 6830, 7314
MluI ACGCGT 1 cut(s) 3667
MluNI TGGCCA 4 cut(s) 2346, 6271, 6830, 7314
MlyI GAGTC 9 cut(s) 24, 1337, 2561, 2969, 3056, 4328, 4894, 5879, 7031
MmeI TCCRAC 9 cut(s) 1165, 3041, 3385, 4079, 4666, 4701, 5560, 5747, 6595
Mox20I TGGCCA 4 cut(s) 2346, 6271, 6830, 7314
Mph1103I ATGCAT 1 cut(s) 4198
MroI TCCGGA 1 cut(s) 6491
MroNI GCCGGC 1 cut(s) 7003
MroXI GAANNNNTTC 2 cut(s) 1057, 4370
MscI TGGCCA 4 cut(s) 2346, 6271, 6830, 7314
MslI CAYNNNNRTG 5 cut(s) 3681, 4191, 4296, 5033, 5279
Msp20I TGGCCA 4 cut(s) 2346, 6271, 6830, 7314
MspA1I CMGCKG 7 cut(s) 141, 4273, 5264, 5915, 5924, 6044, 6551
MssI GTTTAAAC 1 cut(s) 1227
MunI CAATTG 4 cut(s) 725, 5304, 5427, 7479
Mva1269I GAATGC 2 cut(s) 3169, 3414
MvnI CGCG 4 cut(s) 1036, 2698, 3669, 5421
NaeI GCCGGC 1 cut(s) 7005
NciI CCSGG 5 cut(s) 12, 126, 1598, 4060, 7027
NcoI CCATGG 3 cut(s) 2617, 6711, 6813
NdeI CATATG 1 cut(s) 3648
NgoMIV GCCGGC 1 cut(s) 7003
NheI GCTAGC 1 cut(s) 1774
NmeAIII GCCGAG 1 cut(s) 469
NsbI TGCGCA 1 cut(s) 236
NsiI ATGCAT 1 cut(s) 4198
NspI RCATGY 6 cut(s) 718, 1979, 3680, 5617, 5797, 7015
OliI CACNNNNGTG 1 cut(s) 5279
PaeI GCATGC 2 cut(s) 1979, 5617
PagI TCATGA 4 cut(s) 1563, 1669, 3031, 7499
PaqCI CACCTGC 1 cut(s) 3664
PasI CCCWGGG 2 cut(s) 4000, 6794
PceI AGGCCT 2 cut(s) 166, 316
PciI ACATGT 2 cut(s) 3676, 7011
PciSI GCTCTTC 3 cut(s) 1897, 1905, 3965
PcsI WCGNNNNNNNCGW 2 cut(s) 4701, 6260
PctI GAATGC 2 cut(s) 3169, 3414
PdiI GCCGGC 1 cut(s) 7005
PdmI GAANNNNTTC 2 cut(s) 1057, 4370
PflMI CCANNNNNTGG 4 cut(s) 3083, 3509, 4490, 6787
PfoI TCCNGGA 5 cut(s) 10, 3076, 3142, 5451, 7025
PinAI ACCGGT 2 cut(s) 1383, 3185
PleI GAGTC 9 cut(s) 23, 1337, 2560, 2969, 3055, 4327, 4893, 5878, 7030
PmeI GTTTAAAC 1 cut(s) 1227
PpsI GAGTC 9 cut(s) 23, 1337, 2560, 2969, 3055, 4327, 4893, 5878, 7030
Ppu21I YACGTR 2 cut(s) 4817, 7462
PpuMI RGGWCCY 8 cut(s) 2202, 3552, 3809, 4019, 4088, 4277, 5449, 6377
PscI ACATGT 2 cut(s) 3676, 7011
PshBI ATTAAT 2 cut(s) 2907, 6146
PsiI TTATAA 1 cut(s) 6597
Psp124BI GAGCTC 2 cut(s) 2389, 7175
Psp1406I AACGTT 1 cut(s) 6998
Psp5II RGGWCCY 8 cut(s) 2202, 3552, 3809, 4019, 4088, 4277, 5449, 6377
PspEI GGTNACC 2 cut(s) 6798, 7391
PspFI CCCAGC 4 cut(s) 188, 3868, 5960, 6133
PspPPI RGGWCCY 8 cut(s) 2202, 3552, 3809, 4019, 4088, 4277, 5449, 6377
PstI CTGCAG 4 cut(s) 286, 301, 5210, 6523
PstNI CAGNNNCTG 7 cut(s) 2174, 2947, 4556, 4667, 5906, 6044, 7414
PsuI RGATCY 6 cut(s) 506, 3353, 5348, 6014, 6115, 6235
PvuII CAGCTG 4 cut(s) 5264, 5915, 5924, 6044
RseI CAYNNNNRTG 5 cut(s) 3681, 4191, 4296, 5033, 5279
SacI GAGCTC 2 cut(s) 2389, 7175
SapI GCTCTTC 3 cut(s) 1897, 1905, 3965
SbfI CCTGCAGG 2 cut(s) 286, 6523
ScaI AGTACT 1 cut(s) 4008
SchI GAGTC 9 cut(s) 24, 1337, 2561, 2969, 3056, 4328, 4894, 5879, 7031
SdaI CCTGCAGG 2 cut(s) 286, 6523
SduI GDGCHC 7 cut(s) 246, 269, 2389, 4082, 4808, 5480, 7175
SexAI ACCWGGT 2 cut(s) 6160, 6562
SfcI CTRYAG 8 cut(s) 282, 297, 1338, 1461, 2764, 4659, 5206, 6519
SmiMI CAYNNNNRTG 5 cut(s) 3681, 4191, 4296, 5033, 5279
SmlI CTYRAG 7 cut(s) 553, 1703, 2314, 4309, 4401, 6637, 6876
SmoI CTYRAG 7 cut(s) 553, 1703, 2314, 4309, 4401, 6637, 6876
SpeI ACTAGT 2 cut(s) 847, 6443
SphI GCATGC 2 cut(s) 1979, 5617
Sse8387I CCTGCAGG 2 cut(s) 286, 6523
SseBI AGGCCT 2 cut(s) 166, 316
SspI AATATT 3 cut(s) 2887, 3307, 4930
SstI GAGCTC 2 cut(s) 2389, 7175
StuI AGGCCT 2 cut(s) 166, 316
StyI CCWWGG 8 cut(s) 1325, 2617, 3379, 4469, 4745, 6711, 6813, 7396
TaiI ACGT 9 cut(s) 2614, 4707, 4819, 5242, 5720, 6476, 6957, 7001, 7464
TaqII GACCGA 2 cut(s) 5775, 6533
TatI WGTACW 2 cut(s) 3518, 4006
TauI GCSGC 4 cut(s) 721, 3958, 5424, 5748
TspGWI ACGGA 7 cut(s) 647, 1034, 1819, 1957, 3915, 4312, 5509
Van91I CCANNNNNTGG 4 cut(s) 3083, 3509, 4490, 6787
VspI ATTAAT 2 cut(s) 2907, 6146
XagI CCTNNNNNAGG 3 cut(s) 2689, 2764, 6519
XbaI TCTAGA 3 cut(s) 2234, 2803, 3050
XceI RCATGY 6 cut(s) 718, 1979, 3680, 5617, 5797, 7015
XcmI CCANNNNNNNNNTGG 4 cut(s) 422, 870, 6264, 6471
XmaJI CCTAGG 2 cut(s) 3379, 4745
XmiI GTMKAC 2 cut(s) 3983, 6559
XmnI GAANNNNTTC 2 cut(s) 1057, 4370
ZrmI AGTACT 1 cut(s) 4008
Zsp2I ATGCAT 1 cut(s) 4198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.