Rroxscaffold_2G00138260

No description available

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
76381791 .. 76389740
7950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00138260.1

Sequence Viewer

Length: 5799 bp
ATGCAGGAACAGGAGCGCCAGCGGATCCTTGAAGAACAAGAAAAAGCTTTGGAGTTAGCTCGAAGAGAAGAGGAGGAGAGAGTAAGGCTGGCTAAGGAACATATAGAGAGGCAGAGAAGGATGGAAGAAGAAGCTAGGGAAGCAGCATGGAGAGCAGAACAAGAACAACTTGAAGCCATGCGAAGAGCTGAAGAGCAGAGAGTAGCCAGGGAAGAGGAGAAACGGAGGTTGTTTATGGAGGAAGAAAGGAGGAAGCATGCTGCTAAGCAGAAGCTTATAGAATTGGAGGAGAGGATTGCCAAAAGGAAGGCTGAAACAGCAAAGGCTGGTGGTAATTCTTTGGCTGTTGCAGATGAAAATATGTCTAGGATGGTGAAAGACAAAGATGTCTCAAGGGACATTGGTGACTGGGAGGATGGTGAAAGAATGGTGGAGAGGATAACAGCCTCAGCATCTTCTGATTCAAGTTTAAACAGGTCCTTCGAGATGGGTTCTAGGACTCATTTACCTAGAGATAGTTCTGCTTTTGTGGATGGCGGAAAACCTGTTAATTCATGGAGAAGAGATGTGTATGAGAATGGGAACAACTCAACCTTACTTCTACAAGATCAGGACAATGGTCATCATAGTCTGAGAAGAGATAGAGATTCATCTGTTGGTGGGAGAGCTCAGTCAAGGAAAGAGCTCTATGGAGGCGGTGGATTGATGCCTTCTAGGACATACCATAAAGGAGGGATTGCAGACTCTCACATGGATGAAATTTCTCATTTAAGGGGCAGAGGTGGAACCTTTCTGGGGATGTGGATCATTATAGCAGAAACATGGAGATTGAGTCTGATTTCCATGATAACTTTGCTGAAAAGTTCAGTGATGTTGGATGGGGGCAGGGCCGGGTCCATGGCAATCCTTATTCTCCTTATCCTGAACCACTATATCCAAATTCTGATGCAGATGGGCCTTATTCCTTTGGTAGGTCACGGTATTCTGCGAGGCAGCCTCGTGTCCTTCCACCGCCGTCACTGGCTTCTATGCACAAACCCTCCTACAGAGGTGAACCTGATCGTCCTGGCCCCTCAGCTTTTCCAGAAAATGAGATGCAATACAATCATGCAGCTAGAAGTGAATCTACCGTGCAGACAGGTTATGATGGAAATCGACCAGAGAATCTTGTACAACCTGAAATCATTGAAGTCAAACAAGAAAATGCTGGGAATGGGGAGCAAAAGCTGGACACCACTCCAAGGTCCCCCTAGTTCTCCAACTCCTCTTTCTCATGATGACTTGGATGAATCCAGAGATTCTTCAGTTTTATCTGCCCCAGGAAACAATAAAAATGTTACCCTGCCTGGTCAGGAGAACGAATCCCTTGTATTACCTACTGTTCCTGGAAAGGATTCAAGTTCTGTCTCGACTGGTGATGATGAAGAATGGGCTGTTGAGAACAATGAACAGCTTCAGGAGCAAGAGGAGTATGATGAGGATGAAGATGGATATGAGGAAGAAGATGAAGTGCATGAAGATATGCATTTAGAGGGGAAAGAGTCCCCCGATATGGACAACTTTGTTCTATGCTTCAATGAAGGAGTTGAAGTTGGAATGCCAAATGATGAATTTGATAGAACTTCAAGGAATGAAGAAAGTACATTTGTTGTACCTCAGGTTTGCTCTGGCACTGTTGAAGAACACGGGTCCTTTGATAGAATTCATACTGATGAAAAGACCCTTCAACATATGGATGATTCCTCTCAACTAGGTGCAGGTAGTTCTTCCAGAATGTTCCAGGAAACTGAGAAGGGAATGCAGAATTTAGTTATTCAGCCAAATAATGTCCCTCATAAGTCAGCTGCTCCTGAAAGTGTGGATCATGTGGATGCTTCTAGTAGTTCTGGGCCATCTTCCCAGCATCACGTTGCTTCTTCAGTTAATCTTACCTCTCATTTATTGTCTAGTCAGACTGTCATGCCTACAGTATCTGCTGTTCAAAATCAGACGGAGGGACCTGTCAAGCTTCAGTTTGGGCTGTTTTCAGGTCCATCTCTGATACCATCTCCAGTCCCAGCTATACAAATTGGTTCTATACAGATGCCTCTTCCTCTGCACCCTCAGGTTGGCCCTTCTCTTGCTCACATGCACCTGTCACAGCCTCCTCTCTTCCAGTTTGGACAGCTAAGGTATACATCTCCTATATCCCAGGGAGTACTGCCATTGGCCCCTCAATCGATGTCTTTTATTCAGCCCAATGTTCCATCTGGTTTTTCTGTAAATCACAGTCCAGGAGGTCCTCAACCAATTCAATCTGGTCAAGGTACTACTCAAAATATGAAAGATGATGTTGTATCACTTCTGACTGATAATCGTCAGGGCCTTGCTTCAAGGCACTTGGATCCATCTCAAGGGTATGTATCTGAAGGGGTAAATCCAAAGGCAGCAGGAGAAAATGCAGAAACCTCTGTTATGGGGCAGCGGGGAGCAGCAAAATCCTATATTGGCGATAGCAGTTCAACGTCTGGGTCACTTTTCCAAGCGGAAGATCAGGGAAACAATAATTTGGTTGGGAAAAACTTCAGTGCTTTTCCTGGTAACGGGGAATCTGAAAAGCCGTCTCAAATTGGAGCATCATCAGCTCAGACAGTTGTCAAAGGAAGAGATATAGGTGGGCCAAAGGCTTATGGTCCGGTACCTGGTGGTGGCAGAGGGAAAAAATTTGTGTTTACAGTTAAAAATCCTGGCTCAAGATCATTTCCAGTTCCTGAGATTACCCACATAGAATCTAGTGGATATCAGAGGAGACCTCGACGTAATATGCAGCGTACTGAATTTCGTGTTCGAGCAAGTGCTGACAAAAGGCAGTCTACAGGTTCAGTATCATCCAACCATCTTGGACTGGAAGAGAAATATGCACCTGTAAGGGGTTTGGGACCTTCTGTGAGAAGTGGGCCTAGAAAGGTTGTCATGTCGAATAAACAATCAAAACAAATTTCAGAGTCAGAAGGTATGACCCCTGGTTCAAGTAGTTCACAAGAAATAGAGTATGGAAGCAGGACTGATAAGGGTGTGGGAAAAGATGCCTTGGCAAAGAGCCAGAATCTCTCACATTCTGGAGAGGGAAACCTTAAAAGACATTTTCATTCTGAAGAAGATGTTTATGCTCCTCTGCAAAGTGGAGTTGTGCGGGTTTTTGAGCAAACTGGCATAGAGGCTCCTAGTGATGAAGATGATTTCATTGAAGTGAGATCAAAGAGGCAAATGCTGAACGATCGACGTGAACAGAGAGAAAAAGAAATCAAGGCAAAATCTCGGGTCTCAAAGGTATCGCGGAAACCCCGTTCAACTTTAAAAGGTACAACTATCTCTGTCAACTTGGGTAAGAATTCTACAGTGGCAAATGGAGAAGCAGGAAACAACATTCGCTCTGATTTTGCTGGTAATGAGGGACGTGGATTGGCAAATACTGAAGTATCAGCTGGATTTAACACAACTGGCGCTCAACCGCTGGCTCCAATTGGTACTCCAGCTGTGAAAAGTGATGGCCAGGCTGATATCAGATCCCAAACTATGAGGTCCCTCCACACAAGCTCCCTTCCTGTAGTATCAGGTGGTGTAAAGAACCTTGGACGAGGCATGATTCTTGACAACAAGAATAAGGTCCCCGATAATGTTCCATCATCTTTGGGATCATGGGGTAATTCACGGTCTAATCAACAGGTTATGTCCTTGACACAGACCCAACTTGATGATGCTATGAAGCCTGGGCACTTTGATTCTCGTGCTGCTGTTGAATCTCTCACTACCTCAGTTTCCAGTATGTCATCGTCATCCATCTTGACAAAGGATAAATCGTTTTCTTCTGCTGCAAATCCAATCAATTCCCTGCTTGCTGGCGAGAAAATTCAATTTGGCGCGGTCACATCTCCAACAATCCTACCATCTAGCAGCCGTGCTGTTCCACATGGAATTGGCCCACCAGGACCATCTCGGTCAGAGATTCAACTCTCCAGAAATCTTTCTGCAGCTGAGAATGATTGTAACCTTCTCTTTGAGAAAGAAAAACACCCTCCTGAATCTTGTGGTCAGTTGGAAGACTCTGAAGCTGAAGCTGAAGCAGCTGCTTCAGCTGTTGCTGTTGCAGCGATCAGTAGTGACGAAATTGTTGGGAATTTGGGTGCTTGCTCTGTCTCTGGTGCGGATACGAAGAGTTTTGTTGGTGCTGGTATTGATGGGATAACTGCAGGTGGAGTTACTGACCAGCAATTAGCCAGTCAATCAAGGGCCACACAGTCTCTCAGTGCTTCCCTTCCTGCAGATCTCTCTGTTGACACCGCTCCGAATTCCTTGCGGCCACCCTTACCGAGTCAGAAAAATTTCCTTATAGCCAATTATGTTGTGGCCTCCCGTCCCAAGGGTGTTGAAGGTGCTGATGTTGATGTGATATCAACAGGTGGATCTGGTGATCAGCAATTAGCCAGTCAATCTAGGTCCGAAATGTCTCTTAGTGTTTCCCTTCCAGCGGATCTATCTGTAGAGACCCCACCAATTTCACTATGGCCACCTGTGCCAAGTCCTCAGAATCCTTCAGCCCAAATGCTTCCCCACTTTCCTGGTGGTCCACCTTCCCATTTTCCTTTTTATGAGATGAATCCCATGATGGGAGCTCCTGTGTTTGCTTTTGGACCTCCTGATGAATCTGCATCCACTAACCAATCACAATCCCAAAAGAACAGTGCACCTCCTTCAGCTCCAATTGGGACCTGGCAGCAATGCCATTCTGGGGTAGATTCATTCTATGGTCCTCCTACCGGTTTCACTGGTCCTTTCATCAGTCCTGCTGGAGGCATACCAGGTGTTCAAGGGCCACCCCACATGGTTGTTTATAACCACTTCGCACCTGTTGGACAATTTGGGCAAGTTGGCTTGAGTTTCATGGGTACTACCTACATCCCATCAGGAAAGCAGCCTGATTGGAAGCACAACCCTGTATCTTCAGCCATGGGTGTGAGCGAAGTGGAGATGAACAACATGAATATGGTTTCTACACAGCGCAATCCTACTAACATGCCTGCTCCCATCCAGCATTTGGCACCTGGATCACCACTCCTTCCTATGCCTTCACCTATGGCCATGTTTGATGTTCCTCCTTACCAGTCATCTGGTGACATGTCAGTTCAAGCTCGTTGGCCACATGTTCCTGCTGCACCTCCTCAGTCTGTTCCTCTGTCGATGCCATTGCAACAACAGAGTGATGGTATGCACTCTTCCAAATTTAGCCATGCCCATGGTCCTGTTGACCAATCATTAACTGGGAACAGGTTCCCCGAGTCTCGAGCTTCAGCACCTTTTGATAATAGTCGGAATTTTCCTGTGGTGACAGATGCTACTGTCGCCCGATTTCCAGATGAACTGGGATTAGTAGACCCTTCCAGCTCCGGCAGCACTGGGGCCTCAACACAGGGTGTTGTCACTAAGAGCTCAGCTTTAAGCACCAGTGGGGATGCTAGCAAGACGGATGTTGATCAGAATCTCAGTAGTAGCAGTGTTAGTGGACATAACAACACAAGTTCTAATGTCAAATCTCAGCCTTCTCAGCACAAGAATAACGTCTCTAATCAGCAGTATGGCCATTCCTCTTATTATCAGAGAGGTGGATCTCAGAAAAATAGTTCAGGGGGCGAGTGGTCCCACAGAAGAATGGGGTTCCATGGAAGGAATCAATCTATGGGTGCAGAAAAGAGCTTTCCATCTAAGATGAAGCAAGTTTATGTGGCAAAACAGACCCCAAGTGGCAATTCAACGGTATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1932

Amino Acids

208.23

Weight (kDa)

6.01

Isoelectric Point (pI)

61.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4872
AarI CACCTGC 1 cut(s) 4220
AasI GACNNNNNNGTC 1 cut(s) 386
Acc36I ACCTGC 2 cut(s) 1748, 4220
Acc65I GGTACC 1 cut(s) 2677
AccB1I GGYRCC 2 cut(s) 2677, 5077
AccB7I CCANNNNNTGG 1 cut(s) 5074
AccBSI CCGCTC 1 cut(s) 4322
AccI GTMKAC 3 cut(s) 2174, 2852, 5409
AccII CGCG 2 cut(s) 3316, 3902
AcoI YGGCCR 6 cut(s) 3529, 4337, 4544, 5115, 5174, 5614
AdeI CACNNNGTG 1 cut(s) 5450
AflIII ACRYGT 2 cut(s) 5154, 5179
AgeI ACCGGT 1 cut(s) 4796
AjiI CACGTC 2 cut(s) 3263, 3437
AjuI GAANNNNNNNTTGG 4 cut(s) 1252, 1284, 5767, 5799
AloI GAACNNNNNNTCC 2 cut(s) 3310, 3342
Alw21I GWGCWC 5 cut(s) 670, 687, 4654, 4726, 5468
Alw44I GTGCAC 1 cut(s) 4722
AlwNI CAGNNNCTG 2 cut(s) 1973, 2750
Ama87I CYCGRG 3 cut(s) 3297, 5312, 5319
ApaLI GTGCAC 1 cut(s) 4722
AsiGI ACCGGT 1 cut(s) 4796
Asp700I GAANNNNTTC 6 cut(s) 1393, 1452, 2561, 4003, 4361, 5306
Asp718I GGTACC 1 cut(s) 2677
AspLEI GCGC 4 cut(s) 18, 3485, 3902, 5040
AsuC2I CCSGG 1 cut(s) 892
AvaI CYCGRG 3 cut(s) 3297, 5312, 5319
AxyI CCTNAGG 2 cut(s) 1656, 2103
BaeGI GKGCMC 2 cut(s) 3756, 4726
BaeI ACNNNNGTAYC 2 cut(s) 3441, 3474
BalI TGGCCA 5 cut(s) 3531, 4546, 5117, 5176, 5616
BamHI GGATCC 2 cut(s) 24, 2383
BanI GGYRCC 2 cut(s) 2677, 5077
BanII GRGCYC 4 cut(s) 670, 687, 4654, 5468
BarI GAAGNNNNNNTAC 4 cut(s) 1110, 1142, 5236, 5268
BauI CACGAG 2 cut(s) 998, 3765
BbsI GAAGAC 1 cut(s) 4086
Bbv12I GWGCWC 5 cut(s) 670, 687, 4654, 4726, 5468
BbvCI CCTCAGC 2 cut(s) 448, 1074
BceAI ACGGC 3 cut(s) 999, 2584, 3921
BcgI CGANNNNNNTGC 4 cut(s) 4315, 4349, 5206, 5240
BciVI GTATCC 1 cut(s) 4180
BclI TGATCA 2 cut(s) 4450, 5509
BcnI CCSGG 1 cut(s) 892
BfmI CTRYAG 9 cut(s) 1044, 1965, 2853, 3375, 3585, 4008, 4227, 4299, 4518
BfoI RGCGCY 2 cut(s) 19, 3486
BfuAI ACCTGC 2 cut(s) 1748, 4220
BfuI GTATCC 1 cut(s) 4180
BglII AGATCT 1 cut(s) 4303
BlpI GCTNAGC 2 cut(s) 264, 5467
BmcAI AGTACT 1 cut(s) 2199
BmeT110I CYCGRG 3 cut(s) 3297, 5312, 5319
BmgBI CACGTC 2 cut(s) 3263, 3437
BmrI ACTGGG 4 cut(s) 418, 5307, 5408, 5442
BmtI GCTAGC 1 cut(s) 5496
BmuI ACTGGG 4 cut(s) 418, 5307, 5408, 5442
BoxI GACNNNNGTC 2 cut(s) 618, 2633
BpiI GAAGAC 1 cut(s) 4086
BplI GAGNNNNNCTC 4 cut(s) 981, 1013, 2776, 2808
BpmI CTGGAG 5 cut(s) 2034, 3120, 3495, 3979, 4848
Bpu10I CCTNAGC 4 cut(s) 93, 448, 1074, 2168
Bpu1102I GCTNAGC 2 cut(s) 264, 5467
BpuEI CTTGAG 4 cut(s) 376, 2376, 2716, 4933
BpuMI CCSGG 1 cut(s) 892
Bsa29I ATCGAT 1 cut(s) 2219
BsaBI GATNNNNATC 4 cut(s) 803, 1151, 5508, 5514
BsaI GGTCTC 3 cut(s) 2782, 3307, 4517
BsaWI WCCGGW 2 cut(s) 2674, 4796
Bse118I RCCGGY 1 cut(s) 4796
Bse21I CCTNAGG 2 cut(s) 1656, 2103
Bse3DI GCAATG 2 cut(s) 4763, 5222
Bse8I GATNNNNATC 4 cut(s) 803, 1151, 5508, 5514
BseCI ATCGAT 1 cut(s) 2219
BseJI GATNNNNATC 4 cut(s) 803, 1151, 5508, 5514
BseMI GCAATG 2 cut(s) 4763, 5222
BseSI GKGCMC 2 cut(s) 3756, 4726
BseYI CCCAGC 3 cut(s) 1207, 1899, 2056
BsgI GTGCAG 5 cut(s) 1153, 1776, 2081, 5175, 5739
Bsh1236I CGCG 2 cut(s) 3316, 3902
Bsh1285I CGRYCG 1 cut(s) 3259
BshNI GGYRCC 2 cut(s) 2677, 5077
BshTI ACCGGT 1 cut(s) 4796
BshVI ATCGAT 1 cut(s) 2219
BsiEI CGRYCG 1 cut(s) 3259
BsiHKAI GWGCWC 5 cut(s) 670, 687, 4654, 4726, 5468
BsiHKCI CYCGRG 3 cut(s) 3297, 5312, 5319
BsiSI CCGG 4 cut(s) 891, 2675, 4797, 5424
BsmBI CGTCTC 2 cut(s) 2607, 5602
BsmI GAATGC 2 cut(s) 1602, 1803
Bso31I GGTCTC 3 cut(s) 2782, 3307, 4517
BsoBI CYCGRG 3 cut(s) 3297, 5312, 5319
Bsp1286I GDGCHC 6 cut(s) 670, 687, 3756, 4654, 4726, 5468
Bsp1407I TGTACA 1 cut(s) 1170
Bsp1720I GCTNAGC 2 cut(s) 264, 5467
Bsp19I CCATGG 4 cut(s) 897, 4986, 5272, 5695
BspDI ATCGAT 1 cut(s) 2219
BspFNI CGCG 2 cut(s) 3316, 3902
BspHI TCATGA 2 cut(s) 1273, 5795
BspMAI CTGCAG 3 cut(s) 4012, 4231, 4303
BspMI ACCTGC 2 cut(s) 1748, 4220
BspOI GCTAGC 1 cut(s) 5496
BspQI GCTCTTC 2 cut(s) 178, 186
BspT107I GGYRCC 2 cut(s) 2677, 5077
BspTNI GGTCTC 3 cut(s) 2782, 3307, 4517
BsrBI CCGCTC 1 cut(s) 4322
BsrDI GCAATG 2 cut(s) 4763, 5222
BsrFI RCCGGY 1 cut(s) 4796
BsrGI TGTACA 1 cut(s) 1170
BssAI RCCGGY 1 cut(s) 4796
BssNAI GTATAC 1 cut(s) 2175
BssSI CACGAG 2 cut(s) 998, 3765
BssT1I CCWWGG 8 cut(s) 897, 1240, 3069, 3610, 4398, 4986, 5272, 5695
Bst1107I GTATAC 1 cut(s) 2175
Bst2BI CACGAG 2 cut(s) 998, 3765
BstAUI TGTACA 1 cut(s) 1170
BstC8I GCNNGC 9 cut(s) 20, 90, 258, 3495, 3876, 3880, 4168, 5058, 5494
BstDSI CCRYGG 4 cut(s) 897, 4986, 5272, 5695
BstENI CCTNNNNNAGG 2 cut(s) 969, 4827
BstFNI CGCG 2 cut(s) 3316, 3902
BstH2I RGCGCY 2 cut(s) 19, 3486
BstHHI GCGC 4 cut(s) 18, 3485, 3902, 5040
BstMCI CGRYCG 1 cut(s) 3259
BstNSI RCATGY 5 cut(s) 260, 2131, 5056, 5158, 5183
BstPAI GACNNNNGTC 2 cut(s) 618, 2633
BstSFI CTRYAG 9 cut(s) 1044, 1965, 2853, 3375, 3585, 4008, 4227, 4299, 4518
BstSLI GKGCMC 2 cut(s) 3756, 4726
BstUI CGCG 2 cut(s) 3316, 3902
BstV2I GAAGAC 1 cut(s) 4086
BstX2I RGATCY 7 cut(s) 24, 2383, 3545, 4303, 4442, 4510, 5642
BstXI CCANNNNNNTGG 3 cut(s) 4598, 5147, 5273
BstYI RGATCY 7 cut(s) 24, 2383, 3545, 4303, 4442, 4510, 5642
BstZ17I GTATAC 1 cut(s) 2175
Bsu15I ATCGAT 1 cut(s) 2219
Bsu36I CCTNAGG 2 cut(s) 1656, 2103
BsuI GTATCC 1 cut(s) 4180
BsuTUI ATCGAT 1 cut(s) 2219
BtgI CCRYGG 4 cut(s) 897, 4986, 5272, 5695
BtrI CACGTC 2 cut(s) 3263, 3437
BtsI GCAGTG 1 cut(s) 5536
BveI ACCTGC 2 cut(s) 1748, 4220
Cac8I GCNNGC 9 cut(s) 20, 90, 258, 3495, 3876, 3880, 4168, 5058, 5494
CaiI CAGNNNCTG 2 cut(s) 1973, 2750
CciI TCATGA 2 cut(s) 1273, 5795
CfoI GCGC 4 cut(s) 18, 3485, 3902, 5040
Cfr10I RCCGGY 1 cut(s) 4796
ClaI ATCGAT 1 cut(s) 2219
CsiI ACCWGGT 2 cut(s) 2680, 4837
CspAI ACCGGT 1 cut(s) 4796
DraI TTTAAA 2 cut(s) 471, 3336
DraIII CACNNNGTG 1 cut(s) 5450
DrdI GACNNNNNNGTC 1 cut(s) 386
DseDI GACNNNNNNGTC 1 cut(s) 386
EaeI YGGCCR 6 cut(s) 3529, 4337, 4544, 5115, 5174, 5614
EciI GGCGGA 1 cut(s) 552
Ecl136II GAGCTC 4 cut(s) 668, 685, 4652, 5466
Eco130I CCWWGG 8 cut(s) 897, 1240, 3069, 3610, 4398, 4986, 5272, 5695
Eco24I GRGCYC 4 cut(s) 670, 687, 4654, 5468
Eco31I GGTCTC 3 cut(s) 2782, 3307, 4517
Eco32I GATATC 3 cut(s) 2780, 3541, 4431
Eco53kI GAGCTC 4 cut(s) 668, 685, 4652, 5466
Eco81I CCTNAGG 2 cut(s) 1656, 2103
Eco88I CYCGRG 3 cut(s) 3297, 5312, 5319
EcoICRI GAGCTC 4 cut(s) 668, 685, 4652, 5466
EcoNI CCTNNNNNAGG 2 cut(s) 969, 4827
EcoRI GAATTC 3 cut(s) 1701, 3370, 4327
EcoRV GATATC 3 cut(s) 2780, 3541, 4431
EcoT14I CCWWGG 8 cut(s) 897, 1240, 3069, 3610, 4398, 4986, 5272, 5695
EcoT22I ATGCAT 1 cut(s) 1527
EcoT38I GRGCYC 4 cut(s) 670, 687, 4654, 5468
ErhI CCWWGG 8 cut(s) 897, 1240, 3069, 3610, 4398, 4986, 5272, 5695
Esp3I CGTCTC 2 cut(s) 2607, 5602
FalI AAGNNNNNCTT 2 cut(s) 153, 185
FauI CCCGC 2 cut(s) 2457, 3165
FauNDI CATATG 1 cut(s) 1731
FbaI TGATCA 2 cut(s) 4450, 5509
FblI GTMKAC 3 cut(s) 2174, 2852, 5409
FriOI GRGCYC 4 cut(s) 670, 687, 4654, 5468
GlaI GCGC 4 cut(s) 17, 3484, 3901, 5039
GsaI CCCAGC 3 cut(s) 1211, 1903, 2060
GsuI CTGGAG 5 cut(s) 2034, 3120, 3495, 3979, 4848
HaeII RGCGCY 2 cut(s) 19, 3486
HapII CCGG 4 cut(s) 891, 2675, 4797, 5424
HhaI GCGC 4 cut(s) 18, 3485, 3902, 5040
Hin6I GCGC 4 cut(s) 16, 3483, 3900, 5038
HinP1I GCGC 4 cut(s) 16, 3483, 3900, 5038
HincII GTYRAC 3 cut(s) 3358, 4315, 5284
HindII GTYRAC 3 cut(s) 3358, 4315, 5284
HindIII AAGCTT 3 cut(s) 45, 272, 2006
HpaII CCGG 4 cut(s) 891, 2675, 4797, 5424
Hpy99I CGWCG 2 cut(s) 2799, 3264
HpyCH4IV ACGT 6 cut(s) 1908, 2504, 2797, 3262, 3436, 5595
HpySE526I ACGT 6 cut(s) 1908, 2504, 2797, 3262, 3436, 5595
HspAI GCGC 4 cut(s) 16, 3483, 3900, 5038
KpnI GGTACC 1 cut(s) 2681
Ksp22I TGATCA 2 cut(s) 4450, 5509
LguI GCTCTTC 2 cut(s) 178, 186
MabI ACCWGGT 2 cut(s) 2680, 4837
MaeII ACGT 6 cut(s) 1908, 2504, 2797, 3262, 3436, 5595
MbiI CCGCTC 1 cut(s) 4322
MfeI CAATTG 2 cut(s) 3501, 4740
MflI RGATCY 7 cut(s) 24, 2383, 3545, 4303, 4442, 4510, 5642
MhlI GDGCHC 6 cut(s) 670, 687, 3756, 4654, 4726, 5468
MlsI TGGCCA 5 cut(s) 3531, 4546, 5117, 5176, 5616
MluNI TGGCCA 5 cut(s) 3531, 4546, 5117, 5176, 5616
MlyI GAGTC 8 cut(s) 493, 737, 841, 1550, 2993, 4076, 4360, 5324
MmeI TCCRAC 8 cut(s) 855, 1283, 1573, 2895, 3938, 4056, 4870, 5327
Mox20I TGGCCA 5 cut(s) 3531, 4546, 5117, 5176, 5616
Mph1103I ATGCAT 1 cut(s) 1527
MroXI GAANNNNTTC 6 cut(s) 1393, 1452, 2561, 4003, 4361, 5306
MscI TGGCCA 5 cut(s) 3531, 4546, 5117, 5176, 5616
MslI CAYNNNNRTG 8 cut(s) 753, 1710, 1734, 1869, 3227, 4991, 5021, 5271
Msp20I TGGCCA 5 cut(s) 3531, 4546, 5117, 5176, 5616
MspI CCGG 4 cut(s) 891, 2675, 4797, 5424
MssI GTTTAAAC 1 cut(s) 471
MunI CAATTG 2 cut(s) 3501, 4740
Mva1269I GAATGC 2 cut(s) 1602, 1803
MvnI CGCG 2 cut(s) 3316, 3902
NciI CCSGG 1 cut(s) 892
NcoI CCATGG 4 cut(s) 897, 4986, 5272, 5695
NdeI CATATG 1 cut(s) 1731
NheI GCTAGC 1 cut(s) 5492
NsiI ATGCAT 1 cut(s) 1527
NspI RCATGY 5 cut(s) 260, 2131, 5056, 5158, 5183
PaeI GCATGC 1 cut(s) 260
PaeR7I CTCGAG 1 cut(s) 5319
PagI TCATGA 2 cut(s) 1273, 5795
PaqCI CACCTGC 1 cut(s) 4220
PasI CCCWGGG 1 cut(s) 2191
PciI ACATGT 2 cut(s) 5154, 5179
PciSI GCTCTTC 2 cut(s) 178, 186
PctI GAATGC 2 cut(s) 1602, 1803
PdmI GAANNNNTTC 6 cut(s) 1393, 1452, 2561, 4003, 4361, 5306
PflMI CCANNNNNTGG 1 cut(s) 5074
PfoI TCCNGGA 3 cut(s) 1384, 1779, 2272
PinAI ACCGGT 1 cut(s) 4796
Ple19I CGATCG 1 cut(s) 3259
PleI GAGTC 8 cut(s) 493, 737, 840, 1549, 2992, 4076, 4359, 5323
PmeI GTTTAAAC 1 cut(s) 471
PpsI GAGTC 8 cut(s) 493, 737, 840, 1549, 2992, 4076, 4359, 5323
PpuMI RGGWCCY 9 cut(s) 477, 1244, 1689, 1997, 2279, 2918, 3561, 3646, 4746
PscI ACATGT 2 cut(s) 5154, 5179
PshAI GACNNNNGTC 2 cut(s) 618, 2633
PsiI TTATAA 1 cut(s) 4872
Psp124BI GAGCTC 4 cut(s) 670, 687, 4654, 5468
Psp5II RGGWCCY 9 cut(s) 477, 1244, 1689, 1997, 2279, 2918, 3561, 3646, 4746
PspFI CCCAGC 3 cut(s) 1207, 1899, 2056
PspPPI RGGWCCY 9 cut(s) 477, 1244, 1689, 1997, 2279, 2918, 3561, 3646, 4746
PsrI GAACNNNNNNTAC 2 cut(s) 1962, 1994
PstI CTGCAG 3 cut(s) 4012, 4231, 4303
PstNI CAGNNNCTG 2 cut(s) 1973, 2750
PsuI RGATCY 7 cut(s) 24, 2383, 3545, 4303, 4442, 4510, 5642
PvuI CGATCG 1 cut(s) 3259
PvuII CAGCTG 6 cut(s) 1844, 3464, 3515, 4013, 4106, 4115
RseI CAYNNNNRTG 8 cut(s) 753, 1710, 1734, 1869, 3227, 4991, 5021, 5271
SacI GAGCTC 4 cut(s) 670, 687, 4654, 5468
SapI GCTCTTC 2 cut(s) 178, 186
ScaI AGTACT 1 cut(s) 2199
SchI GAGTC 8 cut(s) 493, 737, 841, 1550, 2993, 4076, 4360, 5324
SduI GDGCHC 6 cut(s) 670, 687, 3756, 4654, 4726, 5468
SexAI ACCWGGT 2 cut(s) 2680, 4837
SfcI CTRYAG 9 cut(s) 1044, 1965, 2853, 3375, 3585, 4008, 4227, 4299, 4518
Sfr274I CTCGAG 1 cut(s) 5319
SlaI CTCGAG 1 cut(s) 5319
SmiMI CAYNNNNRTG 8 cut(s) 753, 1710, 1734, 1869, 3227, 4991, 5021, 5271
SmlI CTYRAG 5 cut(s) 391, 2391, 2731, 4912, 5319
SmoI CTYRAG 5 cut(s) 391, 2391, 2731, 4912, 5319
SphI GCATGC 1 cut(s) 260
SstI GAGCTC 4 cut(s) 670, 687, 4654, 5468
StyI CCWWGG 8 cut(s) 897, 1240, 3069, 3610, 4398, 4986, 5272, 5695
TaiI ACGT 6 cut(s) 1911, 2507, 2800, 3265, 3439, 5598
TaqII GACCGA 1 cut(s) 3966
TatI WGTACW 3 cut(s) 1170, 1640, 2197
TauI GCSGC 1 cut(s) 4339
TspGWI ACGGA 3 cut(s) 238, 2006, 5516
Van91I CCANNNNNTGG 1 cut(s) 5074
VneI GTGCAC 1 cut(s) 4722
XagI CCTNNNNNAGG 2 cut(s) 969, 4827
XceI RCATGY 5 cut(s) 260, 2131, 5056, 5158, 5183
XcmI CCANNNNNNNNNTGG 6 cut(s) 4381, 4539, 4598, 4746, 5071, 5294
XhoI CTCGAG 1 cut(s) 5319
XmiI GTMKAC 3 cut(s) 2174, 2852, 5409
XmnI GAANNNNTTC 6 cut(s) 1393, 1452, 2561, 4003, 4361, 5306
ZrmI AGTACT 1 cut(s) 2199
Zsp2I ATGCAT 1 cut(s) 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.