Rmu_sc0001407.1_g000023

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001407.1
Physical Location & Seq
Forward (+)
139197 .. 148428
9232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001407.1_g000023.1.cds

Sequence Viewer

Length: 7428 bp
atggctaatcccggagtcggggcaaagtttgtatctgtcaatctcaacaaatcgtatgggcagccttctcaccatcaccatccgccgcaccctggctcctacggccccaatcggtccagacccggcgggagtcatgccactggaggaatggtggtcctttcgaggcctcgcagtgcgcacaaggctgggccgaagctttctgtaccaccccccttgaatctaccctcgctgcgcaaagagcacgagagatttgattcggccggttcgggaggtgggccggctggcgcaggggtgtcggggactgggtcgaggcctaattcggcgggaatggggtggacgaagcccactgctgctgttgcattgcaggagaaagaagtgtttggtgatcatggagctgatgggaatggaattgaccagagtagtgtccatggtaatgatggggccggtagggggaacagtgtggggagcagtgtttatatgccaccttcagctcggcctggttcagtgggaccgattgctactgcttctgctccagcttatcactcgttggagaaagccatgctgttgaggggcgaggatttcccttctctgcaggctgctttgccttctggatcagggcccgcacagaagcagaaggatggtttgaatcagaaacagagacaagtgcgtgatgaattgctgaatgagcagagaggcagtactcattctagtacgattgttgacatgcgcccgcaattgcagacatcaagtcgtggtacaagcaatgtactgaacgagaatgggggtgaacgtcggggtttgggtggtaatagagcatcagagcaagcacggaagcaggaggattactttcccggtccattaccactagttcggttgaatccgagatcagattgggcagatgatgagcgtgatacgagtcatggtttcacagaccgaggcagagaccatgggttttcaaacacagaagcttattgggatagggattttgatatgccaagaataagtgttctaccgcacaagccagttcataacctttctgagagacgaggtctgcgtgacaatgaaactggaaaggtttcttccagtgaagtccctaaggtggaccaatatggtagagatgtaagagaagaaagggaaggaagctcatggagaaatgctactcttccaaaggatggaattactgatcaagttggaaatgacagaaatggttttggtgcaaggccatcgagtctaaacagagaaacagctagggaaaacaagcataatctgataccttttcaagaaagtgctcaagataatttcggtagaaaggatgcagggtatagacatggagggagacaaccttggaacaatgctatggattcacatgcaatccgaggggctgagtggaataaacgagaccgttatggcagtgaacagcagaaccgatacagaggtgatgccatacagaatagctcagtgtccaaaccctcatactctttgggtagcaaaggactacctgtgaatgatccattactcaattttggaagggagaagcgtccattctcaaagagtgaaaaaccttatgtggaagactttggaggtacagattttgacacccgggatcccttctctgggggtctttttggtgtggttaagaagaaaaaagacgtgactagacaaactgatttccatgatcctgttagggaatcttttgaggctgaacttgagagggttcagaaaatgcaggaacaggagcgccagcggatccttgaagaacaagaaaaagctttggagttagctcgaagagaagaggaggagagagtaaggctggctaaggaacatatagagaggcagagaaggatggaagaagaagctagggaagcagcatggagagcagaacaagaacaacttgaagccatgcgaagagctgaagagcagagagtagccagggaagaggagaaacggaggttgtttatggaggaagaaaggaggaagcatgctgctaagcagaagcttatagaattggaggagaggattgccaaaaggaaggctgaaacagcgaaggctggtggtaattctttggctgttgcagatgaaaatatgtctaggatggtgaaagacaaagatgtctcaagggacattggtgactgggaggatggtgaaagaatggtggagaggataacagcctcagcatcttctgattcaagtttaaacaggtccttcgagatgggttctaggactcatttacctagagatagttctgcttttgtggatggcggaaaacctgttaattcatggagaagagatgtgtatgagaatgggaacaactcaaccttacttctgcaagatcaggacaatggtcatcatagtctgagaagagatagagattcatctgttggtgggagagctcagtcaaggaaagagctctatggaggcggtggattgatgccttctaggacataccataaaggagggattgcagactctcacatggatgacatttctcatttaagggggcagaggtggaacctttctggggatgtggatcattatagcagaaacatggagattgagtctgatttccatgataactttgctgaaaagttcagtgatgttggatgggggcagggccgggttcatggcaatccttattctccttatcctgaaccactatatccaaattctgatgcagatgggccttattcctttggtaggtcacggtattctgcgaggcagcctcgtgtccttccaccgccgtcactggcttctatgcacaaaccctcctacagaggtgaacctgatcgtcctggcccctcagcttttccagaaaatgagatgcaatacaatcatgcagctagaagtgaatctaccatgcagactggttatgatggaaatcgaccagagaatcttgtacaacctgaaatcattgaagtcaaacaagaaaatactgggaatgaggagcaaaaactggacaccactccaaggtgtgactcacagtcatctctttctgtgtctagcccccctagttctccaactcctctttctcatgatgacttggatgaatccagagattcttcagttttatctgccccaggaaacagtaaaaatgttaccctgcctggtcaggacaacgaatcccttgtattacctactgttcctggaaaggattcaagttctgtctcgactggtgatgatgaagaatgggctgttgagaacaatgaacaacttcaggagcaagaggagtatgatgaggatgaagatggatatgaggaagaagatgaagtgcatgaagatatgcatttagaggggaaagagtcccccgatatggacaactttgttctatgcttcaatgaaggagttgaagttggaatgccaaatgatgaatttgatagaacttcaaggaatgaagaaagtacatttgttgtacctcaggtttgctctggcactgttgaagatcacgggtcctttgatggaattcatactgatgaaaagacccttcaacatatggatgattcctctcaactaggtgcaggtagttcttccagaatgttccaggaaactgataaggcaatgcagaatttagttattcagccaaataatgtccatcataagtcagctgctcctgaaagcgtggatcatgtggatgcttctagtagttctgggccatcttcccagcatcacgttgcttcttcagttaatcttacctctcatttgttgtctagtcagactgtcatgcctacagtatccgctgttcaaaatcagacggagggacctgtcaagcttcagtttgggctgttttcaggtccatctctgataccatctccagtcccagctatacaaattggttctatacagatgcctcttcctctgcaccctcaggttggcccttctcttgctcacatgcacccatcacagcctcctctcttccagtttggacagctaaggtatacatctcctatatcccagggagtactgccattggctcctcaatcgatgtcttttattcagcccaatgttccgtctggtttttctgtaaatcagagtccaggaggtcctcagcctattcaatctggtcaaggtactactcaaaatatgaaagatgatgttgtatcacttccgactgataatcgtcagggccttgcttcaaggcacttggatccatctcaagggtatgtatctgaaggggtaaatccaaaggcagcaggagaaaatgcagaaacctctgttatggggcagcggggagcagcaaaatcctatattggcgatagcagttcaacgtctgggtcacttttccaagcagaagatcagggacacaataatttggttgggaaaaacttcagtgctttttctggtaatggggaatctgaaaagcggtctgaaattggagcatcgtcagctcagacagttgtcaaaggaagagatataggtgggccaaaggcatatggtccggtacctggtggtggcagagggaaaaaatttgtgtttacagttaaaaatcctggctcaagatcatttccagttcctgagcttacccacgtagaatctagtggatatcagaggagacctcgacgtaatatgcagcgtactgaatttcgtgttcgagcaagtgctgacaaaaggcagtctacaggttcagtatcatccaaccatcttggactggaagagaaatatgctcctgtaaggggtttgggaccttctgtgaggagtgggcctagaaaggttgtcatgtcgaataaacaatcaaaacaaatttcagagtcagaagttatgacccctggttcaagtagttcacaagcaatagagtatggaagcaggactgataagggtgtgggaaaagatgccttggcaaagagccagaatctcccacattctggagagggaaaccttaaaagacattttcattctgaagaagatgtttatgctcctctgcaaagtggagttgtgcgggtttttgagcaaactggcatagaggctcctagtgatgaagacgatttcattgaagtgagatcaaagaggcaaatgctgaatgatcgacgtgaacagagagaaaaagaaatcaaggcaaaatctcgggtctcaaaggtattgcggaaaccacgttcaactttaaaaggtacaactatctctaccaacttgggtaagaattctacagtggcaaatggagaagcaggaaacaacattcgctctgattttgttggtaatgagggacgtggattgccaaatactgaagtatcagctggatttaacacaactggcactcaaccgctggctccaattggtactccagctgtgaaaagtgatggccaggctgatatcagatcccaaactatgaggtccctccacacaagctcccttcctgtagtatcaggtggtgtaaagaaccttggacgaggcatgattcttgacaataagaataaggtccccgataatgttccgtcatctttgggatcatggggtaattcacggtctaatcaacaggttatgtccttgacacagacccaacttgatgatgctatgaagcctgggcactttgattctcatgctgctgttgaatctctcactacctcagtttccagcatgtcatcgtcatccatcttgacaaaggataaatcattttcttctgctgcaaatccaatcaattccctgcttgctggcgagaaaattcaatttggcgcggtcacttctccaacaatcctaccatctagcagccgtgctgttccacatggaattggcccaccaggaccatctcggtcagagattcaactctccagaaatctttctgcagctgagaatgattgtaaccttctctttgagaaagaaaaacaccctcctgaatcttgtggtcagttggaagactctgaagctgaagctgaagcagctgcttcagctgttgctgttgcagcgatcagtagtgacgaaattgttgggaatttgggtgcttgctctgtctctggtgcggatacgaagagttttgttggtactggtattgatgggataactgcaggtggagctactgaccagcaattagccagtcaatcaagggcctcacagtctctcagtgcttcccttcctgcagatctctctgttgacaccgctccgaattccttacggccacccttaccgagtcagaataatttccttatagccaattacgttgtggccccccgtcccaagggtgttgaaggtgctgatgttgatgtgatatcaacaggtggatctggtgatcagcaattagccagtcaatctaggtccgaagagtctctcagtgtttcccttccagcggatctatctgtagagaccccaccaatttcactatggccacctgtgccaagtcctcagaatccttcagcccaaatgcttccacactttcctggtggcccaccttcccattttcctttttatgagatgaatcccatgatgggggctcctgtgtttgcttttggacctcctgatgagtctgcatccactaaccaatcacaatcccaaaagaacagtgcacctccttcagctccaattgggacctggcagcaatgccattctggggtagattcattctatggtcctcctgccggttttactggtccttttatcagtcctgctggaggcataccaggtgttcaagggccaccccacatggttgtttataaccacttcgcacctgttggacaatttgggcaagttggcttgagtttcatgggtaccacctatatcccatcaggaaagcagcctgattggaagcacaaccctgtatcttcggccatgggtgtgagcgaagtggagatgaacaacatgaatatggtttctacacagcgcaatcctactaacatgcctgctcccatccagcatttggcacctgggtcaccactccttcctatgccttcaccaatggccatgtttgatgttcctccttttcagtcatctgctgacatgtcagttcaagctcgttggccacacgttcctgctgcacctcctcagtctgttcctctgtcgatgccattgcaacaacagagtgatgatgctactgtcgcccgattttcagatgaactgggattagtagacccttccagcgccggcagcactggggcctcaacacagggtgttgtcactaagagctcagctttaagcaccagtggagatgctagcaagacggatgttgatcagaatctcagtagtagcagtgttagtggacataacaacgcaagttctaatgtcaaatctcagccttctcagcacaagaataacgtctctaatcagcagtatggccattcctcttattatcagagaggtggatctcagaaaaatagttcagggggcgagtggtcccacagaagaatggggttccatggaaggaatcaatctatgggtgcagaaaagagctttccatctaagatgaagcaagtttatgtggctaaacagaccccgagtggcaattcaacggtatcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2475

Amino Acids

267.25

Weight (kDa)

5.97

Isoelectric Point (pI)

58.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 6627
AarI CACCTGC 1 cut(s) 5975
AasI GACNNNNNNGTC 1 cut(s) 2108
Acc16I TGCGCA 2 cut(s) 177, 233
Acc36I ACCTGC 2 cut(s) 3503, 5975
Acc65I GGTACC 2 cut(s) 4432, 6680
AccB1I GGYRCC 3 cut(s) 4432, 6680, 6832
AccB7I CCANNNNNTGG 3 cut(s) 1172, 4853, 6829
AccBSI CCGCTC 1 cut(s) 6077
AccI GTMKAC 3 cut(s) 3929, 4607, 7038
AccII CGCG 1 cut(s) 5657
AcoI YGGCCR 8 cut(s) 258, 5284, 6092, 6299, 6738, 6870, 6929, 7243
AdeI CACNNNGTG 1 cut(s) 7079
AflIII ACRYGT 2 cut(s) 6909, 6934
AhdI GACNNNNNGTC 2 cut(s) 747, 2977
AhlI ACTAGT 1 cut(s) 865
AjiI CACGTC 3 cut(s) 1651, 5018, 5192
AjuI GAANNNNNNNTTGG 2 cut(s) 3007, 3039
AloI GAACNNNNNNTCC 2 cut(s) 5065, 5097
Alw21I GWGCWC 6 cut(s) 243, 1291, 2392, 2409, 6481, 7097
Alw44I GTGCAC 1 cut(s) 6477
AlwNI CAGNNNCTG 1 cut(s) 4505
Ama87I CYCGRG 3 cut(s) 1599, 5052, 7402
ApaI GGGCCC 1 cut(s) 621
ApaLI GTGCAC 1 cut(s) 6477
Asp700I GAANNNNTTC 6 cut(s) 1075, 3148, 3207, 4316, 5758, 6116
Asp718I GGTACC 2 cut(s) 4432, 6680
AspLEI GCGC 8 cut(s) 178, 234, 287, 729, 1740, 5657, 6795, 7052
AsuC2I CCSGG 6 cut(s) 12, 123, 852, 1600, 1601, 2615
AsuNHI GCTAGC 1 cut(s) 7121
AvaI CYCGRG 3 cut(s) 1599, 5052, 7402
AxyI CCTNAGG 3 cut(s) 1095, 3411, 3858
BaeGI GKGCMC 3 cut(s) 621, 5511, 6481
BaeI ACNNNNGTAYC 4 cut(s) 1420, 1453, 5196, 5229
BalI TGGCCA 5 cut(s) 5286, 6301, 6872, 6931, 7245
BamHI GGATCC 3 cut(s) 1603, 1746, 4138
BanI GGYRCC 3 cut(s) 4432, 6680, 6832
BanII GRGCYC 5 cut(s) 621, 2392, 2409, 6409, 7097
BarI GAAGNNNNNNTAC 2 cut(s) 2833, 2865
BauI CACGAG 2 cut(s) 242, 2721
BbsI GAAGAC 3 cut(s) 1578, 4974, 5841
Bbv12I GWGCWC 6 cut(s) 243, 1291, 2392, 2409, 6481, 7097
BbvCI CCTCAGC 3 cut(s) 2170, 2797, 4038
BceAI ACGGC 4 cut(s) 118, 2722, 5676, 6107
BcgI CGANNNNNNTGC 6 cut(s) 276, 310, 1206, 1240, 6961, 6995
BciVI GTATCC 2 cut(s) 3736, 5935
BclI TGATCA 4 cut(s) 385, 1183, 6205, 7138
BcnI CCSGG 6 cut(s) 12, 123, 852, 1600, 1601, 2615
BcuI ACTAGT 1 cut(s) 865
BfoI RGCGCY 2 cut(s) 1741, 7053
BfuAI ACCTGC 2 cut(s) 3503, 5975
BfuI GTATCC 2 cut(s) 3736, 5935
BglII AGATCT 1 cut(s) 6058
BlpI GCTNAGC 2 cut(s) 1986, 7096
BmcAI AGTACT 2 cut(s) 700, 3954
BmeRI GACNNNNNGTC 2 cut(s) 747, 2977
BmeT110I CYCGRG 3 cut(s) 1599, 5052, 7402
BmgBI CACGTC 3 cut(s) 1651, 5018, 5192
BmrI ACTGGG 5 cut(s) 312, 2140, 2940, 7037, 7071
BmtI GCTAGC 1 cut(s) 7125
BmuI ACTGGG 5 cut(s) 312, 2140, 2940, 7037, 7071
BoxI GACNNNNGTC 2 cut(s) 2340, 4388
BpiI GAAGAC 3 cut(s) 1578, 4974, 5841
BplI GAGNNNNNCTC 4 cut(s) 2704, 2736, 4531, 4563
BpmI CTGGAG 7 cut(s) 162, 516, 3789, 4875, 5250, 5734, 6603
Bpu10I CCTNAGC 6 cut(s) 1815, 2170, 2797, 3923, 4038, 4506
Bpu1102I GCTNAGC 2 cut(s) 1986, 7096
BpuEI CTTGAG 6 cut(s) 1275, 1727, 2098, 4131, 4471, 6688
BpuMI CCSGG 6 cut(s) 12, 123, 852, 1600, 1601, 2615
Bsa29I ATCGAT 1 cut(s) 3974
BsaAI YACGTR 1 cut(s) 4519
BsaBI GATNNNNATC 4 cut(s) 2526, 2874, 7137, 7143
BsaI GGTCTC 5 cut(s) 936, 1392, 4537, 5062, 6272
BsaWI WCCGGW 1 cut(s) 4429
Bse118I RCCGGY 5 cut(s) 260, 277, 443, 6551, 7052
Bse21I CCTNAGG 3 cut(s) 1095, 3411, 3858
Bse3DI GCAATG 5 cut(s) 359, 769, 3558, 6518, 6977
Bse8I GATNNNNATC 4 cut(s) 2526, 2874, 7137, 7143
BseCI ATCGAT 1 cut(s) 3974
BseJI GATNNNNATC 4 cut(s) 2526, 2874, 7137, 7143
BseMI GCAATG 5 cut(s) 359, 769, 3558, 6518, 6977
BseSI GKGCMC 3 cut(s) 621, 5511, 6481
BseX3I CGGCCG 1 cut(s) 258
BseYI CCCAGC 3 cut(s) 185, 3654, 3811
BsgI GTGCAG 4 cut(s) 3531, 3836, 6930, 7368
Bsh1236I CGCG 1 cut(s) 5657
Bsh1285I CGRYCG 1 cut(s) 261
BshNI GGYRCC 3 cut(s) 4432, 6680, 6832
BshVI ATCGAT 1 cut(s) 3974
BsiEI CGRYCG 1 cut(s) 261
BsiHKAI GWGCWC 6 cut(s) 243, 1291, 2392, 2409, 6481, 7097
BsiHKCI CYCGRG 3 cut(s) 1599, 5052, 7402
BsmBI CGTCTC 2 cut(s) 1036, 7231
BsmI GAATGC 1 cut(s) 3357
Bso31I GGTCTC 5 cut(s) 936, 1392, 4537, 5062, 6272
BsoBI CYCGRG 3 cut(s) 1599, 5052, 7402
Bsp120I GGGCCC 1 cut(s) 617
Bsp1286I GDGCHC 9 cut(s) 243, 621, 1291, 2392, 2409, 5511, 6409, 6481, 7097
Bsp1407I TGTACA 1 cut(s) 2893
Bsp1720I GCTNAGC 2 cut(s) 1986, 7096
Bsp19I CCATGG 4 cut(s) 427, 946, 6741, 7324
BspDI ATCGAT 1 cut(s) 3974
BspFNI CGCG 1 cut(s) 5657
BspHI TCATGA 2 cut(s) 3028, 7424
BspMAI CTGCAG 4 cut(s) 594, 5767, 5986, 6058
BspMI ACCTGC 2 cut(s) 3503, 5975
BspOI GCTAGC 1 cut(s) 7125
BspQI GCTCTTC 2 cut(s) 1900, 1908
BspT107I GGYRCC 3 cut(s) 4432, 6680, 6832
BspTNI GGTCTC 5 cut(s) 936, 1392, 4537, 5062, 6272
BsrBI CCGCTC 1 cut(s) 6077
BsrDI GCAATG 5 cut(s) 359, 769, 3558, 6518, 6977
BsrFI RCCGGY 5 cut(s) 260, 277, 443, 6551, 7052
BsrGI TGTACA 1 cut(s) 2893
BssAI RCCGGY 5 cut(s) 260, 277, 443, 6551, 7052
BssNAI GTATAC 1 cut(s) 3930
BssSI CACGAG 2 cut(s) 242, 2721
BssT1I CCWWGG 9 cut(s) 427, 946, 1343, 2963, 4824, 5365, 6153, 6741, 7324
Bst1107I GTATAC 1 cut(s) 3930
Bst2BI CACGAG 2 cut(s) 242, 2721
BstAUI TGTACA 1 cut(s) 2893
BstBAI YACGTR 1 cut(s) 4519
BstDSI CCRYGG 4 cut(s) 427, 946, 6741, 7324
BstEII GGTNACC 1 cut(s) 6840
BstENI CCTNNNNNAGG 2 cut(s) 2692, 6582
BstFNI CGCG 1 cut(s) 5657
BstH2I RGCGCY 2 cut(s) 1741, 7053
BstHHI GCGC 8 cut(s) 178, 234, 287, 729, 1740, 5657, 6795, 7052
BstMCI CGRYCG 1 cut(s) 261
BstNSI RCATGY 7 cut(s) 727, 1370, 1982, 3886, 5563, 6811, 6913
BstPAI GACNNNNGTC 2 cut(s) 2340, 4388
BstPI GGTNACC 1 cut(s) 6840
BstSLI GKGCMC 3 cut(s) 621, 5511, 6481
BstUI CGCG 1 cut(s) 5657
BstV2I GAAGAC 3 cut(s) 1578, 4974, 5841
BstX2I RGATCY 8 cut(s) 1603, 1746, 4138, 5300, 6058, 6197, 6265, 7271
BstYI RGATCY 8 cut(s) 1603, 1746, 4138, 5300, 6058, 6197, 6265, 7271
BstZ17I GTATAC 1 cut(s) 3930
BstZI CGGCCG 1 cut(s) 258
Bsu15I ATCGAT 1 cut(s) 3974
Bsu36I CCTNAGG 3 cut(s) 1095, 3411, 3858
BsuI GTATCC 2 cut(s) 3736, 5935
BsuTUI ATCGAT 1 cut(s) 3974
BtgI CCRYGG 4 cut(s) 427, 946, 6741, 7324
BtrI CACGTC 3 cut(s) 1651, 5018, 5192
BtsI GCAGTG 5 cut(s) 178, 345, 475, 1417, 7165
BveI ACCTGC 2 cut(s) 3503, 5975
CaiI CAGNNNCTG 1 cut(s) 4505
CciI TCATGA 2 cut(s) 3028, 7424
CfoI GCGC 8 cut(s) 178, 234, 287, 729, 1740, 5657, 6795, 7052
Cfr10I RCCGGY 5 cut(s) 260, 277, 443, 6551, 7052
Cfr9I CCCGGG 1 cut(s) 1599
ClaI ATCGAT 1 cut(s) 3974
CseI GACGC 1 cut(s) 1526
CsiI ACCWGGT 2 cut(s) 4435, 6592
CspCI CAANNNNNGTGG 2 cut(s) 195, 230
DraI TTTAAA 2 cut(s) 2193, 5091
DraIII CACNNNGTG 1 cut(s) 7079
DrdI GACNNNNNNGTC 1 cut(s) 2108
DriI GACNNNNNGTC 2 cut(s) 747, 2977
DseDI GACNNNNNNGTC 1 cut(s) 2108
EaeI YGGCCR 8 cut(s) 258, 5284, 6092, 6299, 6738, 6870, 6929, 7243
EagI CGGCCG 1 cut(s) 258
Eam1105I GACNNNNNGTC 2 cut(s) 747, 2977
EciI GGCGGA 2 cut(s) 72, 2274
Ecl136II GAGCTC 3 cut(s) 2390, 2407, 7095
EclXI CGGCCG 1 cut(s) 258
Eco130I CCWWGG 9 cut(s) 427, 946, 1343, 2963, 4824, 5365, 6153, 6741, 7324
Eco147I AGGCCT 2 cut(s) 166, 313
Eco24I GRGCYC 5 cut(s) 621, 2392, 2409, 6409, 7097
Eco31I GGTCTC 5 cut(s) 936, 1392, 4537, 5062, 6272
Eco32I GATATC 3 cut(s) 4535, 5296, 6186
Eco52I CGGCCG 1 cut(s) 258
Eco53kI GAGCTC 3 cut(s) 2390, 2407, 7095
Eco81I CCTNAGG 3 cut(s) 1095, 3411, 3858
Eco88I CYCGRG 3 cut(s) 1599, 5052, 7402
Eco91I GGTNACC 1 cut(s) 6840
EcoICRI GAGCTC 3 cut(s) 2390, 2407, 7095
EcoNI CCTNNNNNAGG 2 cut(s) 2692, 6582
EcoO65I GGTNACC 1 cut(s) 6840
EcoRI GAATTC 3 cut(s) 3456, 5125, 6082
EcoRV GATATC 3 cut(s) 4535, 5296, 6186
EcoT14I CCWWGG 9 cut(s) 427, 946, 1343, 2963, 4824, 5365, 6153, 6741, 7324
EcoT22I ATGCAT 1 cut(s) 3282
EcoT38I GRGCYC 5 cut(s) 621, 2392, 2409, 6409, 7097
ErhI CCWWGG 9 cut(s) 427, 946, 1343, 2963, 4824, 5365, 6153, 6741, 7324
Esp3I CGTCTC 2 cut(s) 1036, 7231
FalI AAGNNNNNCTT 2 cut(s) 1875, 1907
FauI CCCGC 6 cut(s) 119, 316, 628, 738, 4212, 4920
FauNDI CATATG 2 cut(s) 3486, 4423
FbaI TGATCA 4 cut(s) 385, 1183, 6205, 7138
FblI GTMKAC 3 cut(s) 3929, 4607, 7038
FriOI GRGCYC 5 cut(s) 621, 2392, 2409, 6409, 7097
FspAI RTGCGCAY 1 cut(s) 177
FspI TGCGCA 2 cut(s) 177, 233
GlaI GCGC 8 cut(s) 177, 233, 286, 728, 1739, 5656, 6794, 7051
GsaI CCCAGC 3 cut(s) 189, 3658, 3815
GsuI CTGGAG 7 cut(s) 162, 516, 3789, 4875, 5250, 5734, 6603
HaeII RGCGCY 2 cut(s) 1741, 7053
HgaI GACGC 1 cut(s) 1526
HhaI GCGC 8 cut(s) 178, 234, 287, 729, 1740, 5657, 6795, 7052
Hin6I GCGC 8 cut(s) 176, 232, 285, 727, 1738, 5655, 6793, 7050
HinP1I GCGC 8 cut(s) 176, 232, 285, 727, 1738, 5655, 6793, 7050
HincII GTYRAC 2 cut(s) 721, 6070
HindII GTYRAC 2 cut(s) 721, 6070
HindIII AAGCTT 5 cut(s) 194, 966, 1767, 1994, 3761
Hpy99I CGWCG 3 cut(s) 795, 4554, 5019
HspAI GCGC 8 cut(s) 176, 232, 285, 727, 1738, 5655, 6793, 7050
KpnI GGTACC 2 cut(s) 4436, 6684
KroI GCCGGC 2 cut(s) 277, 7052
KroNI GCCGGC 2 cut(s) 279, 7054
Ksp22I TGATCA 4 cut(s) 385, 1183, 6205, 7138
LguI GCTCTTC 2 cut(s) 1900, 1908
MabI ACCWGGT 2 cut(s) 4435, 6592
MbiI CCGCTC 1 cut(s) 6077
MfeI CAATTG 3 cut(s) 734, 5256, 6495
MflI RGATCY 8 cut(s) 1603, 1746, 4138, 5300, 6058, 6197, 6265, 7271
MhlI GDGCHC 9 cut(s) 243, 621, 1291, 2392, 2409, 5511, 6409, 6481, 7097
MlsI TGGCCA 5 cut(s) 5286, 6301, 6872, 6931, 7245
MluNI TGGCCA 5 cut(s) 5286, 6301, 6872, 6931, 7245
Mox20I TGGCCA 5 cut(s) 5286, 6301, 6872, 6931, 7245
Mph1103I ATGCAT 1 cut(s) 3282
MroNI GCCGGC 2 cut(s) 277, 7052
MroXI GAANNNNTTC 6 cut(s) 1075, 3148, 3207, 4316, 5758, 6116
MscI TGGCCA 5 cut(s) 5286, 6301, 6872, 6931, 7245
MslI CAYNNNNRTG 8 cut(s) 432, 2475, 3465, 3489, 3624, 4982, 6746, 6776
Msp20I TGGCCA 5 cut(s) 5286, 6301, 6872, 6931, 7245
MssI GTTTAAAC 1 cut(s) 2193
MunI CAATTG 3 cut(s) 734, 5256, 6495
Mva1269I GAATGC 1 cut(s) 3357
MvnI CGCG 1 cut(s) 5657
NaeI GCCGGC 2 cut(s) 279, 7054
NciI CCSGG 6 cut(s) 12, 123, 852, 1600, 1601, 2615
NcoI CCATGG 4 cut(s) 427, 946, 6741, 7324
NdeI CATATG 2 cut(s) 3486, 4423
NgoMIV GCCGGC 2 cut(s) 277, 7052
NheI GCTAGC 1 cut(s) 7121
NmeAIII GCCGAG 1 cut(s) 472
NsbI TGCGCA 2 cut(s) 177, 233
NsiI ATGCAT 1 cut(s) 3282
NspI RCATGY 7 cut(s) 727, 1370, 1982, 3886, 5563, 6811, 6913
PaeI GCATGC 1 cut(s) 1982
PagI TCATGA 2 cut(s) 3028, 7424
PaqCI CACCTGC 1 cut(s) 5975
PasI CCCWGGG 1 cut(s) 3946
PceI AGGCCT 2 cut(s) 166, 313
PciI ACATGT 1 cut(s) 6909
PciSI GCTCTTC 2 cut(s) 1900, 1908
PcsI WCGNNNNNNNCGW 1 cut(s) 1051
PctI GAATGC 1 cut(s) 3357
PdiI GCCGGC 2 cut(s) 279, 7054
PdmI GAANNNNTTC 6 cut(s) 1075, 3148, 3207, 4316, 5758, 6116
PflFI GACNNNGTC 2 cut(s) 304, 1047
PflMI CCANNNNNTGG 3 cut(s) 1172, 4853, 6829
PfoI TCCNGGA 4 cut(s) 10, 3139, 3534, 4027
PmeI GTTTAAAC 1 cut(s) 2193
Ppu21I YACGTR 1 cut(s) 4519
PpuMI RGGWCCY 8 cut(s) 2199, 3444, 3752, 4034, 4673, 5316, 5401, 6501
PscI ACATGT 1 cut(s) 6909
PshAI GACNNNNGTC 2 cut(s) 2340, 4388
PsiI TTATAA 1 cut(s) 6627
Psp124BI GAGCTC 3 cut(s) 2392, 2409, 7097
Psp5II RGGWCCY 8 cut(s) 2199, 3444, 3752, 4034, 4673, 5316, 5401, 6501
PspEI GGTNACC 1 cut(s) 6840
PspFI CCCAGC 3 cut(s) 185, 3654, 3811
PspOMI GGGCCC 1 cut(s) 617
PspPPI RGGWCCY 8 cut(s) 2199, 3444, 3752, 4034, 4673, 5316, 5401, 6501
PsrI GAACNNNNNNTAC 2 cut(s) 3717, 3749
PstI CTGCAG 4 cut(s) 594, 5767, 5986, 6058
PstNI CAGNNNCTG 1 cut(s) 4505
PsuI RGATCY 8 cut(s) 1603, 1746, 4138, 5300, 6058, 6197, 6265, 7271
PsyI GACNNNGTC 2 cut(s) 304, 1047
PvuII CAGCTG 6 cut(s) 3599, 5219, 5270, 5768, 5861, 5870
RseI CAYNNNNRTG 8 cut(s) 432, 2475, 3465, 3489, 3624, 4982, 6746, 6776
SacI GAGCTC 3 cut(s) 2392, 2409, 7097
SapI GCTCTTC 2 cut(s) 1900, 1908
ScaI AGTACT 2 cut(s) 700, 3954
SduI GDGCHC 9 cut(s) 243, 621, 1291, 2392, 2409, 5511, 6409, 6481, 7097
SexAI ACCWGGT 2 cut(s) 4435, 6592
SmaI CCCGGG 1 cut(s) 1601
SmiMI CAYNNNNRTG 8 cut(s) 432, 2475, 3465, 3489, 3624, 4982, 6746, 6776
SmlI CTYRAG 6 cut(s) 1290, 1706, 2113, 4146, 4486, 6667
SmoI CTYRAG 6 cut(s) 1290, 1706, 2113, 4146, 4486, 6667
SpeI ACTAGT 1 cut(s) 865
SphI GCATGC 1 cut(s) 1982
SseBI AGGCCT 2 cut(s) 166, 313
SstI GAGCTC 3 cut(s) 2392, 2409, 7097
StuI AGGCCT 2 cut(s) 166, 313
StyI CCWWGG 9 cut(s) 427, 946, 1343, 2963, 4824, 5365, 6153, 6741, 7324
TaqII GACCGA 4 cut(s) 102, 526, 948, 5721
TatI WGTACW 5 cut(s) 698, 766, 2893, 3395, 3952
TauI GCSGC 1 cut(s) 88
TspGWI ACGGA 6 cut(s) 844, 1960, 3761, 3990, 5406, 7145
TspMI CCCGGG 1 cut(s) 1599
Tth111I GACNNNGTC 2 cut(s) 304, 1047
Van91I CCANNNNNTGG 3 cut(s) 1172, 4853, 6829
VneI GTGCAC 1 cut(s) 6477
XagI CCTNNNNNAGG 2 cut(s) 2692, 6582
XceI RCATGY 7 cut(s) 727, 1370, 1982, 3886, 5563, 6811, 6913
XcmI CCANNNNNNNNNTGG 6 cut(s) 145, 434, 6136, 6294, 6501, 6826
XmaI CCCGGG 1 cut(s) 1599
XmiI GTMKAC 3 cut(s) 3929, 4607, 7038
XmnI GAANNNNTTC 6 cut(s) 1075, 3148, 3207, 4316, 5758, 6116
ZrmI AGTACT 2 cut(s) 700, 3954
Zsp2I ATGCAT 1 cut(s) 3282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.