RchiOBHm_Chr2g0105371

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
16656513 .. 16665990
9478 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47959

Sequence Viewer

Length: 7239 bp
ATGGGGTGGACGAAGCCCACTGCTGCTGTTGCATTGCAGGAGAAAGAAGTGTTTGGTGATCATGGAGCTGATGGGAATGGAATTGACCAGAGTAGTGTGCATGGTAATGATGGGGCCGGTAGGGGGAACAGTGTGGGGACCAGTGTTTATATGCCACCTTCAGCTCGGCCTGGTTCAGTGGGACCGATTGCTACTGCTTCTGCTCCAGCTTATCACTCGTTGGAGAAAGCCATGCTGTTGAGGGGCGAGGATTTCCCTTCTCTGCAGGCTGCTTTGCCTTCTGGATCAGGGCCCGCACAGAAGCAGAAGGATGGTTTGAATCAGAAACAGAGACAAGTGCGTGATGAATTGCTGAATGAGCAGAGAGGCAGTACTCATTCTAGTACGATTGTTGACATGCGCCCGCAATTGCAGACATCAAGTCGTGGTACAAGCAATGTACTGAATGAGAATGGGGGTGAAAGTCGGGGTTTGGGTGGTAATAGAGCATCAGAGCAAGCACGGAAGCAGGAGGACTACTTTCCCGGTCCATTACCACTAGTTCGGTTGAATCCGAGATCAGATTGGGCAGATGATGAGCGTGATACGAGTCATGGTTTCACAGACCGAGGCAGAGACCATGGGTTTTCAAACACAGAAGCTTATTGGGATAGGGATTTTGATATGCCAAGAATAAGTGTTCTACCGCACAAGCCAGTTCATAACCTTTCTGAGAGACGAGGTCTGCGTGACAATGAAACTGGAAAGGTTTCTTCCAGTGAAGTCCCTAAGGTGGACCAATATGGTAGAGATGTAAGAACACCTAGTAGAGAAGAAAGGGAAGGAAGCTCATGGAGAAATGCTACTCTTCCAAAGGATGGAATTACTGATCTAGTTGGAAATGACAGAAATGGTTTTGGTGCAAGGCCATCGAGTCTAAACAGAGAAACAGCTAGGGAAAACAAGCATAATCTGATGCCTTTTCAAGAAAGTGCTCAAGATAATTTCGGTAGGAAGGATGCAGGGTATAGACATGGAGGGAGACAACCTTGGAACAATGCTATGGATTCACATGCAAGCCGAGGGGCTGAGTGGAATAAACGAGACCGTTATGGCAGTGAACAGCAGAACAGATACAGAGGTGATGCCATACAGAATAGCTCAGTGTCCAAACCCTCATACTCTTTGGGTAGCAAAGGACTACCTGTGAATGATCCATTACTCAATTTTGGAAGGGAGAAGCGTCCATTCTCAAAGAGTGAAAAACCTTATGCGGAAGACTTTGGAGGTACAGATTTTGACACCCGGGATCCCTTCTCTGGGGGTCTTTTTGGTGTGGTTAAGAAGAAAAAAGACGTGACCAGACAAACTGATTTCCATGATCCTGTTAGGGAATCTTTTGAGGCTGAACTTGAGAGGGTTCAGAAAATGCAGGAACAGGAGCGCCAGCGGATCCTTGAAGAACAAGAAAAAGCTTTGGAGTTAGCTCGAAGAGAAGAGGAGGAGAGAGTAAGGCTGGCTAAGGAACATATAGAGAGGCAGAGAAGGATGGAAGAAGAAGCTAGGGAAGCAGCATGGAGAGCAGAACAAGAACAACTTGAAGCCATGCGAAGAGCTGAAGAGCAGAGAGTAGCCAGGGAAGAGGAGAAACGGAGGTTGTTTATGGAGGAAGAAAGGAGGAAGCATGCTGCTAAGCAGAAGCTTATAGAATTGGAGGAGAGGATTGCCAAAAGGAAGGCTGAAACAGCAAAGGCTGGTGGTAATTCTTTCGCTGTTGCAGATGAAAATATGTCTAGGATGGTGAAAGACAAAGATGTCTCAAGGGACATTGGTGACTGGGAGGATGGTGAAAGAATGGTGGAGAGGATAACAGCCTCAGCATCTTCTGATTCAAGTTTAAACAGGTCCTTCGAGATGGGTTCTAGGACTCATTTACCTAGAGATAGTTCTGCTTTTGTGGATGGCGGAAAGCCTGTTAATTCATGGAGAAGAGATGTGTATGAGAATGGGAACAACTCAACCTTACTTCTACAAGATCAGGACAATGGTCATCATAGTCTGAGAAGAGATAGAGATTCATCTGTTGGTGGGAGAGCTCAGTCAAGGAAAGAGCTCTATGGAGGTGGTGGATTGATGCCTTCTAGGACATACCATAAAGGAGGGATTGCAGACTCTCACATGGATGACATTTCTCATTTAAGGGGGCAGAGGTGGAACCTTTCTGGGGATGTGGATCATTATAGCAGAAACATGGAGATTGAGTCTGATTTCCATGATAACTTTGCTGAAAAGTTCAGTGATGTTGGATGGGGGCAGGGCCGGGTCCATGGCAATCCTTATTCTCCTTATCCTGAACCACTATATCCAAATTCTGATGCAGATGGGCCTTATTCCTTTGGTAGGTCACGGTATTCTGCGAGGCAGCCTCGTGTCCTTCCACCGCCGTCACTGGCTTCTATGCACAAACCCTCCTACAGAGGTGAACCTGATCGTCCTGGCCCCTCAGCTTTTCCAGAAAATGAGATGCAATACAATCATGCAGCTAGAAGTGAATCTACCATGCAGACAGGTTATGATGGAAATCGACCGGAGAATCTTGTACAACCTGAAATCATTGAAGTCAAACAAGAAAATACTGGGAATGAGGAGCAAAAACTGGACACCACTCCAAGGTGTGACTCACAGTCATCTCTTTCTGTGTCTAGCCCCCCTAGTTCTCCGACTCCTCTTTCTCATGATGACTTGGATGAATCCAGAGATTCTTCAGTTTTATCTGCCCCAGGAAACAGTAAAAATGTTACCCTGCCTGGTCAGGAGAATGAATCCCTTGTATTACCTACTGTTCCTGGAAAGGATTCAAGTTCTGTCTCGACTGGTGATGATGAAGAATGGGCTGTTGAGAACAATGAACAACTTCAGGAGCAAGAGGAGTATGATGAGGATGAAGATGGATATGAGGAAGAAGATGAAGTGCATGAAGATATGCATTTAGAGGGGAAAGAGTCCCCCGATATGGACAACTTTGTTCTATGCTTCAATGAAGGAGTTGAAGTTGGAATGCCAAATGATGAATTTGATAGAACTTCAAGGAATGAAGAAAGTACATTTGTTGTACCTCAGGTTTGCTCTGGCACTGTTGAAGAACACGGGTCCTTTGATGGAATTCATACTGATGAAAAGACCCTTCAACATATGGATGATTCCTCTCAACTAGGTGCAGGTAGTTCTTCCAGAATGTTCCAGGAAACTGATAAGGCAATGCAGAATTTAGTTATTCAGCCAAATAATGTCCATCATATGTCAGCTGGTCCTGAAAGCGTGGATCATGTGGATGCTTCTAGTAGTTCTGGGCCATCTTCCCAGAATCACGTTGCTTCTTCAGTTAATCTTACCTCTCATTTGTTGTCTAGTCAGACTGTCATGCCTACAGTATCTGCTGTTCAAAATCAGACGGAGGGACCTGTCAAGCTTCAGTTTGGGCTGTTTTCAGGTCCATCTCTGATACCATCTCCAGTCCCAGCTATACAAATTGGTTCTATACAGATGCCTCTTCCTCTGCACCCTCAGGTTGGCCCTTCTCTTGCTCACATGCACCCATCACAGCCTCCTCTCTTCCAGTTTGGACAGCTAAGGTATACATCTCCTATATCCCAGGGAGTACTGCCATTGGCTCCTCAATCGATGTCTTTTATTCAGCCCAATGTTCCATCTGGTTTTTCTGTAAATCAGAGTTCAGGAGGTCCTCAGCCTATTCAATCTGGTCAAGGTACTACTCAAAATATGAAAGATGATGTTGTATCACTTCCGACTGATAATCGTCAGGGCCTTGCTTCAAGGCACTTGGATCCATCTCAAGGGTATGTATCTGAAGGGGTAAATCCAAAGGCAGCAGGAGAAAATGCAGAAACCTCTGTTATGGGGCAGCGGGGAGCAGCAAAATCCTATATTGGCGATAGCAGTTTAACGTCTGGGTCACTTTTCCAAGCGGAAGATCAGGGACACAATAATTTGGTTGGGAAAAACTTCAGTGCTTTTTCTGGTAACGGGGAATCTGAAAAGCGGTCTGAAATTGGAGCATCGTCAGCTCAGACAGTTGTCAAAGGAAGAGATATAGGTGGGCCAAAGGCTTATGGTCCGGTACCTGGTGGTGGCAGAGGGAAAAAATTTGTGTTTACAGTTAAAAATCCTGGCTCAAGATCATTTCCAGTTCCTGAGCTTACCCACGTAGAATCTAGTGGATATCAGAGGAGACCTCGACGTAATATGCAGCGTACTGAATTTCGTGTTCGAGCAAGTGCTGACAAAAGGCAGTCTACAGGTTCAGTATCATCCAACCATCTTGGACTGGAAGAGAAATATGCTCCTGTAAGGGGTTTGGGACCTTCTGTGAGAAGTGGGCCTAGAAAGGTTGTCATGTCGAATAAACAATCAAAACAAATTTCAGAGTCAGAAGGTATGACTCCTGGTTCAAGTAGTTCACAAGAAATAGAGTATGGAAGCAGGACTGATAAGGGTGTGGGAAAAGATGCCTTGGCAAAGAGCCAGAATCTCCCACATTTTGGAGAGGGAAACCTTAAAAGACATTTTCATTCTGAAGAAGATGTTTATGCTCCTCTGCAAAGTGGTGTTGTGCGGGTTTTTGAGCAAACTGGCATAGAGGCTCCTAGTGATGAAGACGATTTCATTGAAGTGAGATCAAAGAGGCAAATGCTGAATGATCGACGTGAACAGAGAGAAAAAGAAATCAAGGCAAAATCTCGGGTCTCAAAGGTATCGCGGAAACCACGTTCAACTTTAAAAGGTACAACTATCTCTACCAACTTGGGTAAGAATTCTACAGTGGCAAATGGAGAAGCAGGAAACAACATTCGCTCTGATTTTGTTGGTAATGAGGGACGTGGATTGGCAAATACTGAAGTATCAGCTGGATTTAACACAACTGGCGCTCAACCGCTGGCTCCAATTGGTACTCCAGCTGTGAAAAGTGATGGCCAGGCTGATATCAGATCCCAAACTATGAGGTCCCTCCACACAAGCTCCCTTCCTGTAGTGTCAGGTGGTGTAAAGAACCTTGGACGAGGCATGATTCTTGACAACAAGATTAAGGTCCCCGATAATGTTCCGTCATCTTTGGGATCATGGGGTAATTCACGGTCTAATCAACAGGTTATGTCCTTGACGCAGACCCAACTTGATGATGCTATGAAGCCTGGGCACTTTGATTCTCGTGCTGCTGTTGAATCTCTCACTACCTCAGTTTCCAGCATGTCATCGTCATCCATCTTGACAAAGGATAAAACGTTTTCTTCTGCTGCAAATCCAATCAATTCCCTGCTTGCTGGCGAGAAAATTCAATTTGGCGCGGTCACATCTCCAACAATCCTACCATCTAGCAGCCGTGCTGTTCCACATGGAATTGGCCCACCAGGACCATCTCGGTCAGAGATTCAACTCTCCAGAAATCTTTCCGCAGCTGAGAATGATTGTAACCTTCTCTTTGAGAAAGAAAAACACCCTCCTGAATCTTGTGGTCAGTTGGAAGACTCTGAAGCGGAAGCTGAAGCAGCTGCTTCAGCTGTTGCTGTTGCAGCGATCAGTAGTGACGAAATTGTTGGGAATTTGGGTGCTTGCTCTGTCTCTGGTGCGGATACGAAGAGTTTTGTTGGTGCTGGTATTGATGGGATAACTGCAGGTGGAGCTACTGACCAGCAATTAGCCAGTCAATCAAGGGCCACACAGTCTCTCAGTGCTTCCCTTCCTGCAGATCTCTCTGTTGACACCGCTCCGAATTCCTTACGGCCACCCTTACCGAGTCAGAATAATTTCCTTATAGCCAATTACGTTGTGGCCCCCCGTCCCAAGGGTGTTGAAGGTGCTGATGTTGATGTGATATCAACAGGTGGATCTGGTGATCAGCAATTAGCCAGTCAATCTAGGTCTGAAGAGTCTCTCAGTGTTTCCCTTCCAGCGGATCTATCCGTAGAGACCCCTCCAATTTCACTATGGCCACCTGTGCCAAGTCCTCAGAATCCTTCAGCCCAAATGCTTCCACACTTTCCTGGTGGCCCACCTTCCCATTTTCCTTTTTATGAGATGAATCCCATGATGGGTGCTCCTGTGTTTGCTTTTGGACCTCCTGATGAATCTGCATCCACTAACCAATCACAATCCCAAAAGAACAGTGCACCTCCTTCAGCTCCAATTGGGACCTGGCAGCAATGCCATTCTGGGGTAGATTCATTCTATGGTCCTCCTGCCGGTTTTACTGGTCCTTTTATCAGTCCTGCTGGAGGCATACCAGGTGTTCAAGGGCCACCCCACATGGTTGTTTATAACCACTTCGCACCTGTTGGACAATTTGGGCAAGTTGGCTTGAGTTTCATGGGTACTACCTATATCCCATCAGGAAAGCAGCCTGATTGGAAGCACAACCCTGTATCTTCGGCCATGGGTGTGAGCGAAGTGGAGATGAACAACATGAATATGGTTTCTACACAGCGCAATCCTACTAACATGCCTGCTCCCATCCAGCATTTGGCACCTGGGTCACCACTCCTTCCTATGCCTTCACCTATGGCCATGTTTGATGTTCCTCCTTTCCAGTCATCTGCTGACATGTCAGTTCAAGCTCGTTGGCCACATGTTCCTGCTGCACCTCCTCAGTCTGTTCCTCTGTCGATGCCATTGCAACAACAGAGTGATGGTATGCACCCTTCCAAATTTAGCCATGCCCATGGTCCTGTTGACCAATCATTAACTGGGAACAGGTTCCCCGAGTCTCGAGCTTCAGCACCTTTTGATAATAGTCGGAATTTTCCTGTGGTGACAGATGCTACTGTCGCCCGATTTTCAGATGAACTGGGATTAGTAGACCCTTCCAGCTCCGGCAGCACTGGGGCCTCAACACAGGGTGTTGTCACTAAGAGCTCAGCTTTAAGCACCAGTGGAGATGCTAGCAAGACGGATGTTGATCAGAATCTCAGTAGTAGCAGTGTTAGTGGACATAACAACGCAAGTTCTAATGTCAAATCTCAGCCTTCTCAGCACAAGAATAACGTCTCTAATCAGCAGTATGGCCATTCCTCTTATTATCAGAGAGGTGGATCTCAGAAAAATAGTTCAGGGGGCGAGTGGTCCCACAGAAGAATGGGGTTCCATGGAAGGAATCAATCTATGGGTGCAGAAAAGAGCTTTCCATCTAAGATGAAGCAAGTTTATGTGGCTAAACAGACCCCGAGTGGCAATTCAACGGTATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2412

Amino Acids

261.26

Weight (kDa)

5.75

Isoelectric Point (pI)

59.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 6312
AarI CACCTGC 1 cut(s) 5660
AasI GACNNNNNNGTC 1 cut(s) 1793
Acc36I ACCTGC 2 cut(s) 3188, 5660
Acc65I GGTACC 1 cut(s) 4117
AccB1I GGYRCC 2 cut(s) 4117, 6517
AccB7I CCANNNNNTGG 3 cut(s) 857, 4538, 6514
AccBSI CCGCTC 1 cut(s) 5762
AccI GTMKAC 3 cut(s) 3614, 4292, 6849
AccII CGCG 2 cut(s) 4756, 5342
AclI AACGTT 1 cut(s) 5279
AcoI YGGCCR 7 cut(s) 4969, 5777, 5984, 6423, 6555, 6614, 7054
AdeI CACNNNGTG 1 cut(s) 6890
AflIII ACRYGT 2 cut(s) 6594, 6619
AhdI GACNNNNNGTC 2 cut(s) 420, 2662
AhlI ACTAGT 1 cut(s) 538
AjiI CACGTC 3 cut(s) 1336, 4703, 4877
AloI GAACNNNNNNTCC 2 cut(s) 4750, 4782
Alw21I GWGCWC 6 cut(s) 976, 2077, 2094, 6094, 6166, 6908
Alw44I GTGCAC 1 cut(s) 6162
AlwNI CAGNNNCTG 2 cut(s) 3413, 4190
Ama87I CYCGRG 5 cut(s) 1284, 4737, 6752, 6759, 7213
ApaI GGGCCC 1 cut(s) 294
ApaLI GTGCAC 1 cut(s) 6162
Asp700I GAANNNNTTC 7 cut(s) 748, 2833, 2892, 4001, 5443, 5801, 6746
Asp718I GGTACC 1 cut(s) 4117
AspLEI GCGC 5 cut(s) 402, 1425, 4925, 5342, 6480
AsuC2I CCSGG 4 cut(s) 525, 1285, 1286, 2300
AsuNHI GCTAGC 1 cut(s) 6932
AvaI CYCGRG 5 cut(s) 1284, 4737, 6752, 6759, 7213
AxyI CCTNAGG 3 cut(s) 768, 3096, 3543
BaeGI GKGCMC 3 cut(s) 294, 5196, 6166
BaeI ACNNNNGTAYC 4 cut(s) 1105, 1138, 4881, 4914
BalI TGGCCA 5 cut(s) 4971, 5986, 6557, 6616, 7056
BamHI GGATCC 3 cut(s) 1288, 1431, 3823
BanI GGYRCC 2 cut(s) 4117, 6517
BanII GRGCYC 4 cut(s) 294, 2077, 2094, 6908
BarI GAAGNNNNNNTAC 4 cut(s) 2518, 2550, 6676, 6708
BauI CACGAG 2 cut(s) 2406, 5205
BbsI GAAGAC 3 cut(s) 1263, 4659, 5526
Bbv12I GWGCWC 6 cut(s) 976, 2077, 2094, 6094, 6166, 6908
BbvCI CCTCAGC 3 cut(s) 1855, 2482, 3723
BceAI ACGGC 3 cut(s) 2407, 5361, 5792
BcgI CGANNNNNNTGC 4 cut(s) 891, 925, 6646, 6680
BciVI GTATCC 1 cut(s) 5620
BclI TGATCA 3 cut(s) 58, 5890, 6949
BcnI CCSGG 4 cut(s) 525, 1285, 1286, 2300
BcuI ACTAGT 1 cut(s) 538
BfmI CTRYAG 8 cut(s) 263, 2452, 3405, 4293, 4815, 5025, 5667, 5739
BfoI RGCGCY 2 cut(s) 1426, 4926
BfuAI ACCTGC 2 cut(s) 3188, 5660
BfuI GTATCC 1 cut(s) 5620
BglII AGATCT 1 cut(s) 5743
BlpI GCTNAGC 2 cut(s) 1671, 6907
BmcAI AGTACT 2 cut(s) 373, 3639
BmeRI GACNNNNNGTC 2 cut(s) 420, 2662
BmeT110I CYCGRG 5 cut(s) 1284, 4737, 6752, 6759, 7213
BmgBI CACGTC 3 cut(s) 1336, 4703, 4877
BmrI ACTGGG 5 cut(s) 1825, 2625, 6747, 6848, 6882
BmtI GCTAGC 1 cut(s) 6936
BmuI ACTGGG 5 cut(s) 1825, 2625, 6747, 6848, 6882
BoxI GACNNNNGTC 2 cut(s) 2025, 4073
BpiI GAAGAC 3 cut(s) 1263, 4659, 5526
BplI GAGNNNNNCTC 4 cut(s) 2389, 2421, 4216, 4248
BpmI CTGGAG 5 cut(s) 189, 3474, 4935, 5419, 6288
Bpu10I CCTNAGC 6 cut(s) 1500, 1855, 2482, 3608, 3723, 4191
Bpu1102I GCTNAGC 2 cut(s) 1671, 6907
BpuEI CTTGAG 6 cut(s) 960, 1412, 1783, 3816, 4156, 6373
BpuMI CCSGG 4 cut(s) 525, 1285, 1286, 2300
Bsa29I ATCGAT 1 cut(s) 3659
BsaAI YACGTR 1 cut(s) 4204
BsaBI GATNNNNATC 4 cut(s) 2211, 2559, 6948, 6954
BsaI GGTCTC 5 cut(s) 609, 1077, 4222, 4747, 5957
BsaWI WCCGGW 2 cut(s) 2566, 4114
BsaXI ACNNNNNCTCC 8 cut(s) 2225, 2255, 2432, 2462, 3015, 3045, 5000, 5030
Bse118I RCCGGY 2 cut(s) 116, 6236
Bse21I CCTNAGG 3 cut(s) 768, 3096, 3543
Bse3DI GCAATG 5 cut(s) 32, 442, 3243, 6203, 6662
Bse8I GATNNNNATC 4 cut(s) 2211, 2559, 6948, 6954
BseCI ATCGAT 1 cut(s) 3659
BseJI GATNNNNATC 4 cut(s) 2211, 2559, 6948, 6954
BseMI GCAATG 5 cut(s) 32, 442, 3243, 6203, 6662
BseSI GKGCMC 3 cut(s) 294, 5196, 6166
BseYI CCCAGC 1 cut(s) 3496
BsgI GTGCAG 4 cut(s) 3216, 3521, 6615, 7179
Bsh1236I CGCG 2 cut(s) 4756, 5342
Bsh1285I CGRYCG 1 cut(s) 2567
BshNI GGYRCC 2 cut(s) 4117, 6517
BshVI ATCGAT 1 cut(s) 3659
BsiEI CGRYCG 1 cut(s) 2567
BsiHKAI GWGCWC 6 cut(s) 976, 2077, 2094, 6094, 6166, 6908
BsiHKCI CYCGRG 5 cut(s) 1284, 4737, 6752, 6759, 7213
BsiSI CCGG 8 cut(s) 117, 525, 1285, 2299, 2567, 4115, 6237, 6864
BsmBI CGTCTC 2 cut(s) 709, 7042
BsmI GAATGC 1 cut(s) 3042
Bso31I GGTCTC 5 cut(s) 609, 1077, 4222, 4747, 5957
BsoBI CYCGRG 5 cut(s) 1284, 4737, 6752, 6759, 7213
Bsp120I GGGCCC 1 cut(s) 290
Bsp1286I GDGCHC 8 cut(s) 294, 976, 2077, 2094, 5196, 6094, 6166, 6908
Bsp1407I TGTACA 1 cut(s) 2578
Bsp1720I GCTNAGC 2 cut(s) 1671, 6907
Bsp19I CCATGG 5 cut(s) 619, 2305, 6426, 6712, 7135
BspDI ATCGAT 1 cut(s) 3659
BspFNI CGCG 2 cut(s) 4756, 5342
BspHI TCATGA 2 cut(s) 2713, 7235
BspMAI CTGCAG 3 cut(s) 267, 5671, 5743
BspMI ACCTGC 2 cut(s) 3188, 5660
BspOI GCTAGC 1 cut(s) 6936
BspQI GCTCTTC 2 cut(s) 1585, 1593
BspT107I GGYRCC 2 cut(s) 4117, 6517
BspTNI GGTCTC 5 cut(s) 609, 1077, 4222, 4747, 5957
BsrBI CCGCTC 1 cut(s) 5762
BsrDI GCAATG 5 cut(s) 32, 442, 3243, 6203, 6662
BsrFI RCCGGY 2 cut(s) 116, 6236
BsrGI TGTACA 1 cut(s) 2578
BssAI RCCGGY 2 cut(s) 116, 6236
BssNAI GTATAC 1 cut(s) 3615
BssSI CACGAG 2 cut(s) 2406, 5205
Bst1107I GTATAC 1 cut(s) 3615
Bst2BI CACGAG 2 cut(s) 2406, 5205
BstAUI TGTACA 1 cut(s) 2578
BstBAI YACGTR 1 cut(s) 4204
BstDSI CCRYGG 5 cut(s) 619, 2305, 6426, 6712, 7135
BstEII GGTNACC 1 cut(s) 6525
BstENI CCTNNNNNAGG 2 cut(s) 2377, 6267
BstFNI CGCG 2 cut(s) 4756, 5342
BstH2I RGCGCY 2 cut(s) 1426, 4926
BstHHI GCGC 5 cut(s) 402, 1425, 4925, 5342, 6480
BstMCI CGRYCG 1 cut(s) 2567
BstNSI RCATGY 8 cut(s) 400, 1055, 1667, 3571, 5248, 6496, 6598, 6623
BstPAI GACNNNNGTC 2 cut(s) 2025, 4073
BstPI GGTNACC 1 cut(s) 6525
BstSFI CTRYAG 8 cut(s) 263, 2452, 3405, 4293, 4815, 5025, 5667, 5739
BstSLI GKGCMC 3 cut(s) 294, 5196, 6166
BstUI CGCG 2 cut(s) 4756, 5342
BstV2I GAAGAC 3 cut(s) 1263, 4659, 5526
BstX2I RGATCY 8 cut(s) 1288, 1431, 3823, 4985, 5743, 5882, 5950, 7082
BstXI CCANNNNNNTGG 1 cut(s) 6713
BstYI RGATCY 8 cut(s) 1288, 1431, 3823, 4985, 5743, 5882, 5950, 7082
BstZ17I GTATAC 1 cut(s) 3615
Bsu15I ATCGAT 1 cut(s) 3659
Bsu36I CCTNAGG 3 cut(s) 768, 3096, 3543
BsuI GTATCC 1 cut(s) 5620
BsuTUI ATCGAT 1 cut(s) 3659
BtgI CCRYGG 5 cut(s) 619, 2305, 6426, 6712, 7135
BtrI CACGTC 3 cut(s) 1336, 4703, 4877
BtsI GCAGTG 3 cut(s) 18, 1102, 6976
BveI ACCTGC 2 cut(s) 3188, 5660
CaiI CAGNNNCTG 2 cut(s) 3413, 4190
CciI TCATGA 2 cut(s) 2713, 7235
CfoI GCGC 5 cut(s) 402, 1425, 4925, 5342, 6480
Cfr10I RCCGGY 2 cut(s) 116, 6236
Cfr9I CCCGGG 1 cut(s) 1284
ClaI ATCGAT 1 cut(s) 3659
CseI GACGC 2 cut(s) 1211, 5167
CsiI ACCWGGT 2 cut(s) 4120, 6277
DraI TTTAAA 2 cut(s) 1878, 4776
DraIII CACNNNGTG 1 cut(s) 6890
DrdI GACNNNNNNGTC 1 cut(s) 1793
DriI GACNNNNNGTC 2 cut(s) 420, 2662
DseDI GACNNNNNNGTC 1 cut(s) 1793
EaeI YGGCCR 7 cut(s) 4969, 5777, 5984, 6423, 6555, 6614, 7054
Eam1105I GACNNNNNGTC 2 cut(s) 420, 2662
EciI GGCGGA 1 cut(s) 1959
Ecl136II GAGCTC 3 cut(s) 2075, 2092, 6906
Eco24I GRGCYC 4 cut(s) 294, 2077, 2094, 6908
Eco31I GGTCTC 5 cut(s) 609, 1077, 4222, 4747, 5957
Eco32I GATATC 3 cut(s) 4220, 4981, 5871
Eco53kI GAGCTC 3 cut(s) 2075, 2092, 6906
Eco81I CCTNAGG 3 cut(s) 768, 3096, 3543
Eco88I CYCGRG 5 cut(s) 1284, 4737, 6752, 6759, 7213
Eco91I GGTNACC 1 cut(s) 6525
EcoICRI GAGCTC 3 cut(s) 2075, 2092, 6906
EcoNI CCTNNNNNAGG 2 cut(s) 2377, 6267
EcoO65I GGTNACC 1 cut(s) 6525
EcoRI GAATTC 3 cut(s) 3141, 4810, 5767
EcoRV GATATC 3 cut(s) 4220, 4981, 5871
EcoT22I ATGCAT 1 cut(s) 2967
EcoT38I GRGCYC 4 cut(s) 294, 2077, 2094, 6908
Esp3I CGTCTC 2 cut(s) 709, 7042
FalI AAGNNNNNCTT 2 cut(s) 1560, 1592
FauI CCCGC 4 cut(s) 301, 411, 3897, 4605
FauNDI CATATG 2 cut(s) 3171, 3276
FbaI TGATCA 3 cut(s) 58, 5890, 6949
FblI GTMKAC 3 cut(s) 3614, 4292, 6849
FriOI GRGCYC 4 cut(s) 294, 2077, 2094, 6908
GlaI GCGC 5 cut(s) 401, 1424, 4924, 5341, 6479
GsaI CCCAGC 1 cut(s) 3500
GsuI CTGGAG 5 cut(s) 189, 3474, 4935, 5419, 6288
HaeII RGCGCY 2 cut(s) 1426, 4926
HapII CCGG 8 cut(s) 117, 525, 1285, 2299, 2567, 4115, 6237, 6864
HgaI GACGC 2 cut(s) 1211, 5167
HhaI GCGC 5 cut(s) 402, 1425, 4925, 5342, 6480
Hin6I GCGC 5 cut(s) 400, 1423, 4923, 5340, 6478
HinP1I GCGC 5 cut(s) 400, 1423, 4923, 5340, 6478
HincII GTYRAC 3 cut(s) 394, 5755, 6724
HindII GTYRAC 3 cut(s) 394, 5755, 6724
HindIII AAGCTT 4 cut(s) 639, 1452, 1679, 3446
HpaII CCGG 8 cut(s) 117, 525, 1285, 2299, 2567, 4115, 6237, 6864
Hpy99I CGWCG 2 cut(s) 4239, 4704
HspAI GCGC 5 cut(s) 400, 1423, 4923, 5340, 6478
KpnI GGTACC 1 cut(s) 4121
Ksp22I TGATCA 3 cut(s) 58, 5890, 6949
LguI GCTCTTC 2 cut(s) 1585, 1593
MabI ACCWGGT 2 cut(s) 4120, 6277
MbiI CCGCTC 1 cut(s) 5762
MfeI CAATTG 3 cut(s) 407, 4941, 6180
MflI RGATCY 8 cut(s) 1288, 1431, 3823, 4985, 5743, 5882, 5950, 7082
MhlI GDGCHC 8 cut(s) 294, 976, 2077, 2094, 5196, 6094, 6166, 6908
MlsI TGGCCA 5 cut(s) 4971, 5986, 6557, 6616, 7056
MluNI TGGCCA 5 cut(s) 4971, 5986, 6557, 6616, 7056
Mox20I TGGCCA 5 cut(s) 4971, 5986, 6557, 6616, 7056
Mph1103I ATGCAT 1 cut(s) 2967
MroXI GAANNNNTTC 7 cut(s) 748, 2833, 2892, 4001, 5443, 5801, 6746
MscI TGGCCA 5 cut(s) 4971, 5986, 6557, 6616, 7056
MslI CAYNNNNRTG 9 cut(s) 105, 2160, 3150, 3174, 3309, 4667, 6431, 6461, 6711
Msp20I TGGCCA 5 cut(s) 4971, 5986, 6557, 6616, 7056
MspI CCGG 8 cut(s) 117, 525, 1285, 2299, 2567, 4115, 6237, 6864
MssI GTTTAAAC 1 cut(s) 1878
MunI CAATTG 3 cut(s) 407, 4941, 6180
Mva1269I GAATGC 1 cut(s) 3042
MvnI CGCG 2 cut(s) 4756, 5342
NciI CCSGG 4 cut(s) 525, 1285, 1286, 2300
NcoI CCATGG 5 cut(s) 619, 2305, 6426, 6712, 7135
NdeI CATATG 2 cut(s) 3171, 3276
NheI GCTAGC 1 cut(s) 6932
NmeAIII GCCGAG 2 cut(s) 145, 1085
NsiI ATGCAT 1 cut(s) 2967
NspI RCATGY 8 cut(s) 400, 1055, 1667, 3571, 5248, 6496, 6598, 6623
PaeI GCATGC 1 cut(s) 1667
PaeR7I CTCGAG 1 cut(s) 6759
PagI TCATGA 2 cut(s) 2713, 7235
PaqCI CACCTGC 1 cut(s) 5660
PasI CCCWGGG 1 cut(s) 3631
PciI ACATGT 2 cut(s) 6594, 6619
PciSI GCTCTTC 2 cut(s) 1585, 1593
PcsI WCGNNNNNNNCGW 1 cut(s) 724
PctI GAATGC 1 cut(s) 3042
PdmI GAANNNNTTC 7 cut(s) 748, 2833, 2892, 4001, 5443, 5801, 6746
PflFI GACNNNGTC 1 cut(s) 720
PflMI CCANNNNNTGG 3 cut(s) 857, 4538, 6514
PfoI TCCNGGA 2 cut(s) 2824, 3219
PmeI GTTTAAAC 1 cut(s) 1878
Ppu21I YACGTR 1 cut(s) 4204
PpuMI RGGWCCY 8 cut(s) 1884, 3129, 3437, 3719, 4358, 5001, 5086, 6186
PscI ACATGT 2 cut(s) 6594, 6619
PshAI GACNNNNGTC 2 cut(s) 2025, 4073
PsiI TTATAA 1 cut(s) 6312
Psp124BI GAGCTC 3 cut(s) 2077, 2094, 6908
Psp1406I AACGTT 1 cut(s) 5279
Psp5II RGGWCCY 8 cut(s) 1884, 3129, 3437, 3719, 4358, 5001, 5086, 6186
PspEI GGTNACC 1 cut(s) 6525
PspFI CCCAGC 1 cut(s) 3496
PspOMI GGGCCC 1 cut(s) 290
PspPPI RGGWCCY 8 cut(s) 1884, 3129, 3437, 3719, 4358, 5001, 5086, 6186
PsrI GAACNNNNNNTAC 2 cut(s) 3402, 3434
PstI CTGCAG 3 cut(s) 267, 5671, 5743
PstNI CAGNNNCTG 2 cut(s) 3413, 4190
PsuI RGATCY 8 cut(s) 1288, 1431, 3823, 4985, 5743, 5882, 5950, 7082
PsyI GACNNNGTC 1 cut(s) 720
PvuII CAGCTG 6 cut(s) 3284, 4904, 4955, 5453, 5546, 5555
RseI CAYNNNNRTG 9 cut(s) 105, 2160, 3150, 3174, 3309, 4667, 6431, 6461, 6711
SacI GAGCTC 3 cut(s) 2077, 2094, 6908
SapI GCTCTTC 2 cut(s) 1585, 1593
ScaI AGTACT 2 cut(s) 373, 3639
SduI GDGCHC 8 cut(s) 294, 976, 2077, 2094, 5196, 6094, 6166, 6908
SexAI ACCWGGT 2 cut(s) 4120, 6277
SfcI CTRYAG 8 cut(s) 263, 2452, 3405, 4293, 4815, 5025, 5667, 5739
Sfr274I CTCGAG 1 cut(s) 6759
SlaI CTCGAG 1 cut(s) 6759
SmaI CCCGGG 1 cut(s) 1286
SmiMI CAYNNNNRTG 9 cut(s) 105, 2160, 3150, 3174, 3309, 4667, 6431, 6461, 6711
SmlI CTYRAG 7 cut(s) 975, 1391, 1798, 3831, 4171, 6352, 6759
SmoI CTYRAG 7 cut(s) 975, 1391, 1798, 3831, 4171, 6352, 6759
SpeI ACTAGT 1 cut(s) 538
SphI GCATGC 1 cut(s) 1667
SstI GAGCTC 3 cut(s) 2077, 2094, 6908
TaqII GACCGA 3 cut(s) 199, 621, 5406
TatI WGTACW 5 cut(s) 371, 439, 2578, 3080, 3637
TspGWI ACGGA 6 cut(s) 517, 1645, 3446, 5091, 5947, 6956
TspMI CCCGGG 1 cut(s) 1284
Tth111I GACNNNGTC 1 cut(s) 720
Van91I CCANNNNNTGG 3 cut(s) 857, 4538, 6514
VneI GTGCAC 1 cut(s) 6162
XagI CCTNNNNNAGG 2 cut(s) 2377, 6267
XceI RCATGY 8 cut(s) 400, 1055, 1667, 3571, 5248, 6496, 6598, 6623
XcmI CCANNNNNNNNNTGG 5 cut(s) 5821, 5979, 6186, 6511, 6734
XhoI CTCGAG 1 cut(s) 6759
XmaI CCCGGG 1 cut(s) 1284
XmiI GTMKAC 3 cut(s) 3614, 4292, 6849
XmnI GAANNNNTTC 7 cut(s) 748, 2833, 2892, 4001, 5443, 5801, 6746
ZrmI AGTACT 2 cut(s) 373, 3639
Zsp2I ATGCAT 1 cut(s) 2967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.