Rh2AG178600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
17066657 .. 17076907
10251 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG178600.1

Sequence Viewer

Length: 6093 bp
ATGGCTAATCCCGGAGTCGGGGCAAAGTTTGTATCTGTCAATCTCAACAAATCGTATGGGCAGCCTTCTCATCATCACCATCCGCCGCACCCTGGCTCCTACGGCCCCAATCGGTCCAGACCCGGCGGGAGTCATGCCACTGGAGGAATGGTGGTCCTTTCGAGGCCTCGCAGTGCGCACAAGGCTGGGCCGAAGCTTTCTGTACCACCCCCCTTGAATCTGCCCTCGCTGCGCAAAGAGCACGAGAGATTTGACTCGGCCGGTTCGGGAGGTGGGCCGGCTGGCGCAGGGGTGTCGGGGAGTGGGTCGAGGCCTAATTCGGCGGGAATGGGGTGGACGAAGCCCACTGCTGCTGTTGCATTGCAGGAGAAAGAAGTGTTTGGTGATCATGGAGCTGATGGGAATGGGAATGGAATTGACCAGAGTAGTGTGCATGGTAATGATGGGGCCGGTAGGGGGAACAGTGTGGGGAGCAGTGTTTATATGCCACCTTCAGCTCGGCCTGGTTCAGTGGGACCGATTGCTACTGCTTCTGCTCCACCTTATCACTCGTTGGAGAAAGCCATGCTGTTGAGGGGCGAGGATTTCCCTTCTCTGCAGGCTGCTTTGCCTTCTGGATCAGGGCCCGCACAGAAGCAGAAGGATGGTTTGAATCAGAAACAGAGACAAGTGCGTGATGAATTGCTGAATGAGCAGAGAGGCAGTACTCATTCTAGTACGATTGTTGACATGCGCCCGCAATTGCAGACATCAAGTCGTGGTACAAGCAATGTACTGAACGAGAATGGGGGTGAAAGTCGGGGTTTGGGTGGTAATAGAGCATCAGAGCAAGCACGGAAGCAGGAGGACTACTTTCCCGGTCCATTACCACTAGTTCGGTTGAATCCGAGATCAGATTGGGCAGATGATGAGCGTGATACGAGTCATGGTTTCACAGACCGAGGCAGAGACCATGGGTTTTCAAACACAGAAGCTTATTGGGATAGGGATTTTGATATGCCAAGAATAAGTGTTCTACCGCACAAGCCAGTTCATAACCTTTCTGAGAGACGAGGTCTGCGTGACAATGAAACTGGAAAGGTTTCTTCCAGTGAAGTCCCTAAGGTGGACCAATATGGTAGAGATGTAAGAACACCTAGTAGAGATGAAAGGGAAGGAAGCTCATGGAGAAATGCTACTCTTCCAAAGGATGGAATTACTGATCAAGTTGGAAATGACAGAAATGGTTTTGGTGCAAGGCCATCGAGTCTAAACAGAGAAACAGCTAGGGAAAACAAGCATAATCTGATGCCTTTTCAAGAAAGTGCTCAAGATAATTTCGGTAGAAAGGATGCAGGGTATAGACATGGAGGGAGACAACCTTGGAACAATGCTATGGATTCACATGCAAGCCGAGGGGCTGAGTGGAATAAACGAGACCGTTATGGCAGTGAACAGCAGAACCGATACAGAGGTGATGCCATACAGAATAGCTCAGTGTCCAAACCCTCATACTCTTTGGGTAGCAAAGGACTACCTGTGAATGATCCATTACTCAATTTTGGAAGGGAGAAGCGTCCATTCTCAAAGAGTGAAAAACCTTATGTGGAAGACTTTGGAGGTACAGATTTTGACACCCGGGATCCCTTCTCTGGGGGTCTTTTTGGTGTGGTTAAGAAGAAAAAAGACGTGACTAGACAAACTGATTTCCATGATCCTGTTAGGGAATCTTTTGAGGCTGAACTTGAGAGGGTTCAGAAAATGCAGGAACAGGAGCGCCAGCGGATCCTTGAAGAACAAGAAAAAGCTTTGGAGTTAGCTCGAAGAGAAGAGGAGGAGAGAGTAAGGCTGGCTAAGGAACATATAGAGAGGCAGAGAAGGATGGAAGAAGAAGCTAGGGAAGCAGCATGGAGAGCAGAACAAGAACAACTTGAAGCCATGCGAAGAGCTGAAGAGCAGAGAGTAGCCAGGGAAGAGGAGAAACGGAGGTTGTTTATGGAGGAAGAAAGGAGGAAGCATGCTGCTAAGCAGAAGCTTATAGAATTGGAGGAGAGGATTGCCAAAAGGAAGGCTGAAACAGCAAAGGCTGGTGGTAATTCTTTGGCTGTTGCAGATGAAAATATGTCTAGGATGGTGAAAGACAAAGATGTCTCAAGGGACATTGGTGACTGGGAGGATGGTGAAAGAATGGTGGAGAGGATAACAGCCTCAGCATCTTCTGATTCAAGTTTAAACAGGTCCTTCGAGATGGGTTCTAGGACTCATTTACCTAGAGATAGTTCTGCTTTTGTGGATGGCGGAAAACCTGTTAATTCATGGAGAAGAGATGTGTATGAGAATGGGAACAACTCAACCTTACTTCTGCAAGATCAGGACAATGGTCATCATAGTCTGAGAAGAGATAGAGATTCATCTGTTGGTGGGAGAGCTCAGTCAAGGAAAGAGCTCTACGGAGGCGGTGGATTGATGCCTTCTAGGACATACCATAAAGGAGGGATTGCAGACTCTCACATGGATGACATTTCTCATTTAAGGGGGCAGAGGTGGAACCTTTCTGGGGATGTGGATCATTATAGCAGAAACATGGAGATTGAGTCTGATTTCCATGATAACTTTGCTGAAAAGTTCAGTGATGTTGGATGGGGGCAGGGCCGGGTCCATGGCAATCCTTATTCTCCTTATCCTGAACCACTATATCCAAATTCTGATGCAGATGGGCCTTATTCCTTTGGTAGGTCACGGTATTCTGCGAGGCAGCCTCGTGTCCTTCCACCACCGTCACTGGCTTCTATGCACAAACCCTCCTACAGAGGTGAACCTGATCGTCCTGGCCCCTCAGCTTTTCCAGAAAATGAGATGCAATACAATCATGCAGCTAGAAGTGAATCTACCATGCAGACAGGTTATGATGGAAATCGACCAGAGAATCTTGTACAACCTGAAATCATTGAAGTCAAACAAGAAAATGCTGGGAATGAGGAGCAAAAACTGGACACCACTCCAAGGTGTGACTCACAGTCATCTCTTTCTGTGTCTAGCCCCCCTAGTTCTCCAACTCCTCTTTCTCATGATGACTTGGATGAATCCAGAGATTCTTCAGTTTTATCTGCCCCAGGAAACAGTAAAAATGTTACCCTGCCTGGTCAGGAGAACGAATCCCTTGTATTACCTACTGTTCCTGGAAAGGATTCAAGTTCTGTCTCGACTGGTGATGATGAAGAATGGGCTGTTGAGAACAATGAACAACTTCAGGAGCAAGAGGAGTATGATGAGGATGAAGATGGATATGAGGAAGAAGATGAAGTGCATGAAGATATGCATTTAGAGGGGAAAGAGTCCCCCGATATGGACAACTTTGTTCTATGCTTCAATGAAGGAGTTGAAGTTGGAATGCCAAATGATGAATTTGATAGAACTTCAAGGAATGAAGAAAGTACATTTGTTGTACCTCAGGTTTGCTCTGGCACTGTTGAAGAACACGGGTCCTTTGATGGAATTCATACTGATGAAAAGACCCTTCAACATATGGATGATTCCTCTCAACTAGGTGCAGGTAGTTCTTCCAGAATGTTCCAGGAAACTGATAAGGCAATGCAGAATTTAGTTATTCAGCCAAATAATGTCCATCATAAGTCAGCTGGTCCTGAAAGCGTGGATCATGTGGATGCTTCTAGTAGTTCTGGGCCATCTTCCCAGCATCACGTTGCTTCTTCAGTTAATCTTACCTCTCATTTGTTGTCTAGTCAGACTGTCATGCCTACAGTATCTGCTGTTCAAAATCAGACGGAGGGACCTGTCAAGCTTCAGTTTGGGCTGTTTTCAGGTCCATCTCTGATACCATCTCCAGTCCCAGCTATACAAATTGGTTCTATACAGATGCCTCTTCCTCTGCACCCTCAGGTTGGCCCTTCTCTTGCTCACATGCACCCATCACAGCCTCCTCTCTTCCAGTTTGGACAGCTAAGGTATACATCTCCTATATCCCAGGGAGTACTGCCATTGGCTCCTCAATCGATGTCTTTTATTCAGCCCAATGTTCCATCTGGTTTTTCTGTAAATCAGAGTCCAGGAGGTCCTCAGCCTATTCAATCTGGTCAAGGTACTACTCAAAATATGAAAGATGATGTTGTATCACTTCCGACTGATAATCGTCAGGGCCTTGCTTCAAGGCACTTGGATCCATCTCAAGGGTATGTATCTGAAGGGGTAAATCCAAAGGCAGCAGGAGAAAATGCAGAAACCTCTGTTATGGGGCAGCGGGGAGCAGCAAAATCCTATATTGGCGATAGCAGTTCAACGTCCGGGTCACTTTTCCAAGCGGAAGATCAGGGACACAATAATTTGGTTGGGAAAAACTTCAGTACTTTTTCTGGTAACGGGGAATCTGAAAAGCGGTCTGAAATTGGAGCATCGTCAGCTCAGACAGTTGTCAAAGGAAGAGATATAGGTGGGCCAAAGGCTTATGGTCCGGTACCTGGTGGTGGCAGAGGGAAAAAATTTGTGTTTACAGTTAAAAATCCTGGCTCAAGATCATTTCCAGTTCCTGAGCTTACCCACGTAGAATCTAGTGGATATCAGAGGAGACCTCGACGTAATATGCAGCGTACTGAATTTCGTGTTCGAGCAAGTGCTGACAAAAGGCAGTCTACAGGTTCAGTATCATCCAATCATCTTGGACTGGAAGAGAAATATGCTCCTGTAAGGGGTTTGGGACCTTCTGTGAGAAGTGGGCCTAGAAAGGTTGCCATGTCGAATAAACAATCAAAACAAATTTCAGAGTCAGAAGGTATGACTCCTGGTTCAAGTAGTTCACAAGAAATGGAGTATGGAAGCAAGACTGATAAGGGTGTGGGAAAAGATGCCTTGGCAAAGAGCCAGAATCTCCCACATTTTGGAGAGGGAAACCTTAAAAGACATTTTCATTCTGAAGAAGATGTTTATGCTCCTCTGGAAAGTGGAGTTGTGCGGGTTTTTGAGCAAACTGGCATAGAGGCTCCTAGTGATGAAGACGATTTCATTGAAGTGAGATCAAAGAGGCAAATGCTGAATGATCGACGTGAACAGAGAGAAAAAGAAATCAAGGCAAAATCTCGGGTCTCAAAGGTATCGCGGAAACCACGTTCAACTTTAAAAGGTACAACTATCTCTACCAACTTGGGTAAGAATTCTACAGTGGCAAATGGAGAAGCAGGAAACAACATTCGCTCTGATTTTGTTGGTAATGAGGGACGTGGATTGGCAAATACTGAAGTATCAGCTGGATTTAACACAACTGGCGCTCAACCGCTGGCTCCAATTGGTACTCCAGCTGTGAAAAGTGATGGCCAGGCTGATATCAGATCCCAAACTATGAGGTCCCTCCACACAAGCTCCCTTCCTGTAGTATCAGGTGGTGTAAAGAACCTTGGACGAGGCATGATTCTTGACAACAAGATTAAGGTCCCCGATAATGTTCCGTCATCTTTGGGATCATGGGGTAATTCACGGTCTAATCAACAGGTTATGTCCTTGACGCAGACCCAACTTGATGATGCTATGAAGCCTGGGCACTTTGATTCTCGTGCTGCTGTTGAATCTCTCACTACCTCAGTTTCCAGCATGTCATCGTCATCCATCTTGACAAAGGATAAATCGTTTTCTTCTGCTGCAAATCCAATCAATTCCCTGCTTGCTGGCGAGAAAATTCAATTTGGTGAGCAGTTAAAAAATCTTGGGGGGGTTACTAAATGCTGCATTTTCTCATTTCTCATTGGGTTTCTCCCTTTGTATTCAGGCGCGGTCACATCTCCAACAATCCTACCATCTAGCAGCCGTGCTGTTCCACATGGAATTGGCCCACCAGGACCATCTCGGTCAGAGATTCAACTCTCCAGAAATCTTTCCGCAGCTGAGAATGATTGTAACCTTCTCTTTGAGAAAGAAAAACACCCTCCTGAATCTTGTGGTCAGTTGGAAGACTCTGAAGCTGAAGCTGAAGCAGCTGCTTCAGCTGTTGCTGTTGCAGCAATCAGTAGTGACGAAATTGTTGGGAATTTGGGTGCTTGCTCTGTCTCTGGTGCAGATACGAAGAGTTTTGTTGGTGCTGGTATTGATGGGATAACTGCAGGTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2030

Amino Acids

220.61

Weight (kDa)

5.92

Isoelectric Point (pI)

56.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 6074
AasI GACNNNNNNGTC 1 cut(s) 2126
Acc16I TGCGCA 2 cut(s) 177, 233
Acc36I ACCTGC 2 cut(s) 3521, 6074
Acc65I GGTACC 1 cut(s) 4450
AccB1I GGYRCC 1 cut(s) 4450
AccB7I CCANNNNNTGG 2 cut(s) 1190, 4871
AccI GTMKAC 2 cut(s) 3947, 4625
AccII CGCG 2 cut(s) 5089, 5756
AcoI YGGCCR 2 cut(s) 258, 5302
AhdI GACNNNNNGTC 2 cut(s) 753, 2995
AhlI ACTAGT 1 cut(s) 871
AjiI CACGTC 3 cut(s) 1669, 5036, 5210
AjuI GAANNNNNNNTTGG 2 cut(s) 3025, 3057
AloI GAACNNNNNNTCC 2 cut(s) 5083, 5115
Alw21I GWGCWC 4 cut(s) 243, 1309, 2410, 2427
AlwNI CAGNNNCTG 2 cut(s) 3746, 4523
Ama87I CYCGRG 2 cut(s) 1617, 5070
ApaI GGGCCC 1 cut(s) 627
Asp700I GAANNNNTTC 5 cut(s) 1081, 3166, 3225, 4334, 5857
Asp718I GGTACC 1 cut(s) 4450
AspLEI GCGC 7 cut(s) 178, 234, 287, 735, 1758, 5258, 5756
AsuC2I CCSGG 7 cut(s) 12, 123, 858, 1618, 1619, 2633, 4282
AvaI CYCGRG 2 cut(s) 1617, 5070
AxyI CCTNAGG 3 cut(s) 1101, 3429, 3876
BaeGI GKGCMC 2 cut(s) 627, 5529
BaeI ACNNNNGTAYC 4 cut(s) 1438, 1471, 5214, 5247
BalI TGGCCA 1 cut(s) 5304
BamHI GGATCC 3 cut(s) 1621, 1764, 4156
BanI GGYRCC 1 cut(s) 4450
BanII GRGCYC 3 cut(s) 627, 2410, 2427
BarI GAAGNNNNNNTAC 2 cut(s) 2851, 2883
BauI CACGAG 3 cut(s) 242, 2739, 5538
BbsI GAAGAC 3 cut(s) 1596, 4992, 5940
Bbv12I GWGCWC 4 cut(s) 243, 1309, 2410, 2427
BbvCI CCTCAGC 3 cut(s) 2188, 2815, 4056
BceAI ACGGC 2 cut(s) 118, 5775
BcgI CGANNNNNNTGC 4 cut(s) 276, 310, 1224, 1258
BclI TGATCA 2 cut(s) 385, 1201
BcnI CCSGG 7 cut(s) 12, 123, 858, 1618, 1619, 2633, 4282
BcuI ACTAGT 1 cut(s) 871
BfmI CTRYAG 7 cut(s) 596, 2785, 3738, 4626, 5148, 5358, 6081
BfoI RGCGCY 2 cut(s) 1759, 5259
BfuAI ACCTGC 2 cut(s) 3521, 6074
BlpI GCTNAGC 1 cut(s) 2004
BmcAI AGTACT 3 cut(s) 706, 3972, 4342
BmeRI GACNNNNNGTC 2 cut(s) 753, 2995
BmeT110I CYCGRG 2 cut(s) 1617, 5070
BmgBI CACGTC 3 cut(s) 1669, 5036, 5210
BmrI ACTGGG 1 cut(s) 2158
BmuI ACTGGG 1 cut(s) 2158
BoxI GACNNNNGTC 2 cut(s) 2358, 4406
BpiI GAAGAC 3 cut(s) 1596, 4992, 5940
BplI GAGNNNNNCTC 4 cut(s) 2722, 2754, 4549, 4581
BpmI CTGGAG 4 cut(s) 162, 3807, 5268, 5833
Bpu10I CCTNAGC 6 cut(s) 1833, 2188, 2815, 3941, 4056, 4524
Bpu1102I GCTNAGC 1 cut(s) 2004
BpuEI CTTGAG 5 cut(s) 1293, 1745, 2116, 4149, 4489
BpuMI CCSGG 7 cut(s) 12, 123, 858, 1618, 1619, 2633, 4282
Bsa29I ATCGAT 1 cut(s) 3992
BsaAI YACGTR 1 cut(s) 4537
BsaBI GATNNNNATC 2 cut(s) 2544, 2892
BsaI GGTCTC 4 cut(s) 942, 1410, 4555, 5080
BsaWI WCCGGW 1 cut(s) 4447
Bse118I RCCGGY 3 cut(s) 260, 277, 449
Bse21I CCTNAGG 3 cut(s) 1101, 3429, 3876
Bse3DI GCAATG 3 cut(s) 359, 775, 3576
Bse8I GATNNNNATC 2 cut(s) 2544, 2892
BseCI ATCGAT 1 cut(s) 3992
BseJI GATNNNNATC 2 cut(s) 2544, 2892
BseMI GCAATG 3 cut(s) 359, 775, 3576
BseSI GKGCMC 2 cut(s) 627, 5529
BseX3I CGGCCG 1 cut(s) 258
BseYI CCCAGC 4 cut(s) 185, 2948, 3672, 3829
BsgI GTGCAG 3 cut(s) 3549, 3854, 6057
Bsh1236I CGCG 2 cut(s) 5089, 5756
Bsh1285I CGRYCG 1 cut(s) 261
BshNI GGYRCC 1 cut(s) 4450
BshVI ATCGAT 1 cut(s) 3992
BsiEI CGRYCG 1 cut(s) 261
BsiHKAI GWGCWC 4 cut(s) 243, 1309, 2410, 2427
BsiHKCI CYCGRG 2 cut(s) 1617, 5070
BsmBI CGTCTC 1 cut(s) 1042
BsmI GAATGC 1 cut(s) 3375
Bso31I GGTCTC 4 cut(s) 942, 1410, 4555, 5080
BsoBI CYCGRG 2 cut(s) 1617, 5070
Bsp120I GGGCCC 1 cut(s) 623
Bsp1286I GDGCHC 6 cut(s) 243, 627, 1309, 2410, 2427, 5529
Bsp1407I TGTACA 1 cut(s) 2911
Bsp1720I GCTNAGC 1 cut(s) 2004
Bsp19I CCATGG 2 cut(s) 952, 2638
BspDI ATCGAT 1 cut(s) 3992
BspFNI CGCG 2 cut(s) 5089, 5756
BspHI TCATGA 1 cut(s) 3046
BspMAI CTGCAG 2 cut(s) 600, 6085
BspMI ACCTGC 2 cut(s) 3521, 6074
BspQI GCTCTTC 2 cut(s) 1918, 1926
BspT107I GGYRCC 1 cut(s) 4450
BspTNI GGTCTC 4 cut(s) 942, 1410, 4555, 5080
BsrDI GCAATG 3 cut(s) 359, 775, 3576
BsrFI RCCGGY 3 cut(s) 260, 277, 449
BsrGI TGTACA 1 cut(s) 2911
BssAI RCCGGY 3 cut(s) 260, 277, 449
BssNAI GTATAC 1 cut(s) 3948
BssSI CACGAG 3 cut(s) 242, 2739, 5538
BssT1I CCWWGG 6 cut(s) 952, 1361, 2638, 2981, 4842, 5383
Bst1107I GTATAC 1 cut(s) 3948
Bst2BI CACGAG 3 cut(s) 242, 2739, 5538
BstAUI TGTACA 1 cut(s) 2911
BstBAI YACGTR 1 cut(s) 4537
BstDSI CCRYGG 2 cut(s) 952, 2638
BstENI CCTNNNNNAGG 1 cut(s) 2710
BstFNI CGCG 2 cut(s) 5089, 5756
BstH2I RGCGCY 2 cut(s) 1759, 5259
BstHHI GCGC 7 cut(s) 178, 234, 287, 735, 1758, 5258, 5756
BstMCI CGRYCG 1 cut(s) 261
BstNSI RCATGY 5 cut(s) 733, 1388, 2000, 3904, 5581
BstPAI GACNNNNGTC 2 cut(s) 2358, 4406
BstSFI CTRYAG 7 cut(s) 596, 2785, 3738, 4626, 5148, 5358, 6081
BstSLI GKGCMC 2 cut(s) 627, 5529
BstUI CGCG 2 cut(s) 5089, 5756
BstV2I GAAGAC 3 cut(s) 1596, 4992, 5940
BstX2I RGATCY 4 cut(s) 1621, 1764, 4156, 5318
BstYI RGATCY 4 cut(s) 1621, 1764, 4156, 5318
BstZ17I GTATAC 1 cut(s) 3948
BstZI CGGCCG 1 cut(s) 258
Bsu15I ATCGAT 1 cut(s) 3992
Bsu36I CCTNAGG 3 cut(s) 1101, 3429, 3876
BsuTUI ATCGAT 1 cut(s) 3992
BtgI CCRYGG 2 cut(s) 952, 2638
BtrI CACGTC 3 cut(s) 1669, 5036, 5210
BtsI GCAGTG 4 cut(s) 178, 345, 481, 1435
BveI ACCTGC 2 cut(s) 3521, 6074
CaiI CAGNNNCTG 2 cut(s) 3746, 4523
CciI TCATGA 1 cut(s) 3046
CfoI GCGC 7 cut(s) 178, 234, 287, 735, 1758, 5258, 5756
Cfr10I RCCGGY 3 cut(s) 260, 277, 449
Cfr9I CCCGGG 1 cut(s) 1617
ClaI ATCGAT 1 cut(s) 3992
CseI GACGC 2 cut(s) 1544, 5500
CsiI ACCWGGT 1 cut(s) 4453
CspCI CAANNNNNGTGG 2 cut(s) 195, 230
DraI TTTAAA 2 cut(s) 2211, 5109
DrdI GACNNNNNNGTC 1 cut(s) 2126
DriI GACNNNNNGTC 2 cut(s) 753, 2995
DseDI GACNNNNNNGTC 1 cut(s) 2126
EaeI YGGCCR 2 cut(s) 258, 5302
EagI CGGCCG 1 cut(s) 258
Eam1105I GACNNNNNGTC 2 cut(s) 753, 2995
EciI GGCGGA 2 cut(s) 72, 2292
Ecl136II GAGCTC 2 cut(s) 2408, 2425
EclXI CGGCCG 1 cut(s) 258
Eco130I CCWWGG 6 cut(s) 952, 1361, 2638, 2981, 4842, 5383
Eco147I AGGCCT 2 cut(s) 166, 313
Eco24I GRGCYC 3 cut(s) 627, 2410, 2427
Eco31I GGTCTC 4 cut(s) 942, 1410, 4555, 5080
Eco32I GATATC 2 cut(s) 4553, 5314
Eco52I CGGCCG 1 cut(s) 258
Eco53kI GAGCTC 2 cut(s) 2408, 2425
Eco81I CCTNAGG 3 cut(s) 1101, 3429, 3876
Eco88I CYCGRG 2 cut(s) 1617, 5070
EcoICRI GAGCTC 2 cut(s) 2408, 2425
EcoNI CCTNNNNNAGG 1 cut(s) 2710
EcoO109I RGGNCCY 9 cut(s) 623, 2217, 3462, 3770, 4052, 4135, 4691, 5334, 5419
EcoRI GAATTC 2 cut(s) 3474, 5143
EcoRV GATATC 2 cut(s) 4553, 5314
EcoT14I CCWWGG 6 cut(s) 952, 1361, 2638, 2981, 4842, 5383
EcoT22I ATGCAT 1 cut(s) 3300
EcoT38I GRGCYC 3 cut(s) 627, 2410, 2427
ErhI CCWWGG 6 cut(s) 952, 1361, 2638, 2981, 4842, 5383
Esp3I CGTCTC 1 cut(s) 1042
FalI AAGNNNNNCTT 2 cut(s) 1893, 1925
FauI CCCGC 6 cut(s) 119, 316, 634, 744, 4230, 4938
FauNDI CATATG 1 cut(s) 3504
FbaI TGATCA 2 cut(s) 385, 1201
FblI GTMKAC 2 cut(s) 3947, 4625
FriOI GRGCYC 3 cut(s) 627, 2410, 2427
FspAI RTGCGCAY 1 cut(s) 177
FspI TGCGCA 2 cut(s) 177, 233
GlaI GCGC 7 cut(s) 177, 233, 286, 734, 1757, 5257, 5755
GsaI CCCAGC 4 cut(s) 189, 2952, 3676, 3833
GsuI CTGGAG 4 cut(s) 162, 3807, 5268, 5833
HaeII RGCGCY 2 cut(s) 1759, 5259
HgaI GACGC 2 cut(s) 1544, 5500
HhaI GCGC 7 cut(s) 178, 234, 287, 735, 1758, 5258, 5756
Hin6I GCGC 7 cut(s) 176, 232, 285, 733, 1756, 5256, 5754
HinP1I GCGC 7 cut(s) 176, 232, 285, 733, 1756, 5256, 5754
HincII GTYRAC 1 cut(s) 727
HindII GTYRAC 1 cut(s) 727
HindIII AAGCTT 5 cut(s) 194, 972, 1785, 2012, 3779
Hpy99I CGWCG 2 cut(s) 4572, 5037
HpyCH4IV ACGT 8 cut(s) 1668, 3681, 4277, 4536, 4570, 5035, 5098, 5209
HpySE526I ACGT 8 cut(s) 1668, 3681, 4277, 4536, 4570, 5035, 5098, 5209
HspAI GCGC 7 cut(s) 176, 232, 285, 733, 1756, 5256, 5754
KpnI GGTACC 1 cut(s) 4454
KroI GCCGGC 1 cut(s) 277
KroNI GCCGGC 1 cut(s) 279
Ksp22I TGATCA 2 cut(s) 385, 1201
LguI GCTCTTC 2 cut(s) 1918, 1926
MabI ACCWGGT 1 cut(s) 4453
MaeII ACGT 8 cut(s) 1668, 3681, 4277, 4536, 4570, 5035, 5098, 5209
MfeI CAATTG 2 cut(s) 740, 5274
MflI RGATCY 4 cut(s) 1621, 1764, 4156, 5318
MhlI GDGCHC 6 cut(s) 243, 627, 1309, 2410, 2427, 5529
MlsI TGGCCA 1 cut(s) 5304
MluNI TGGCCA 1 cut(s) 5304
MmeI TCCRAC 8 cut(s) 534, 1189, 2596, 3056, 3346, 4142, 5792, 5910
Mox20I TGGCCA 1 cut(s) 5304
Mph1103I ATGCAT 1 cut(s) 3300
MroNI GCCGGC 1 cut(s) 277
MroXI GAANNNNTTC 5 cut(s) 1081, 3166, 3225, 4334, 5857
MscI TGGCCA 1 cut(s) 5304
MslI CAYNNNNRTG 6 cut(s) 438, 2493, 3483, 3507, 3642, 5000
Msp20I TGGCCA 1 cut(s) 5304
MspA1I CMGCKG 9 cut(s) 1762, 3617, 4237, 5237, 5266, 5288, 5867, 5960, 5969
MssI GTTTAAAC 1 cut(s) 2211
MunI CAATTG 2 cut(s) 740, 5274
Mva1269I GAATGC 1 cut(s) 3375
MvnI CGCG 2 cut(s) 5089, 5756
NaeI GCCGGC 1 cut(s) 279
NciI CCSGG 7 cut(s) 12, 123, 858, 1618, 1619, 2633, 4282
NcoI CCATGG 2 cut(s) 952, 2638
NdeI CATATG 1 cut(s) 3504
NgoMIV GCCGGC 1 cut(s) 277
NmeAIII GCCGAG 3 cut(s) 236, 478, 1418
NmuCI GTSAC 9 cut(s) 1061, 1669, 2144, 2715, 2757, 2987, 4284, 5758, 5993
NsbI TGCGCA 2 cut(s) 177, 233
NsiI ATGCAT 1 cut(s) 3300
NspI RCATGY 5 cut(s) 733, 1388, 2000, 3904, 5581
PaeI GCATGC 1 cut(s) 2000
PagI TCATGA 1 cut(s) 3046
PaqCI CACCTGC 1 cut(s) 6074
PasI CCCWGGG 1 cut(s) 3964
PceI AGGCCT 2 cut(s) 166, 313
PciSI GCTCTTC 2 cut(s) 1918, 1926
PcsI WCGNNNNNNNCGW 1 cut(s) 1057
PctI GAATGC 1 cut(s) 3375
PdiI GCCGGC 1 cut(s) 279
PdmI GAANNNNTTC 5 cut(s) 1081, 3166, 3225, 4334, 5857
PflFI GACNNNGTC 1 cut(s) 1053
PflMI CCANNNNNTGG 2 cut(s) 1190, 4871
PfoI TCCNGGA 4 cut(s) 10, 3157, 3552, 4045
PmeI GTTTAAAC 1 cut(s) 2211
Ppu21I YACGTR 1 cut(s) 4537
PpuMI RGGWCCY 7 cut(s) 2217, 3462, 3770, 4052, 4691, 5334, 5419
PshAI GACNNNNGTC 2 cut(s) 2358, 4406
Psp124BI GAGCTC 2 cut(s) 2410, 2427
Psp5II RGGWCCY 7 cut(s) 2217, 3462, 3770, 4052, 4691, 5334, 5419
PspFI CCCAGC 4 cut(s) 185, 2948, 3672, 3829
PspOMI GGGCCC 1 cut(s) 623
PspPPI RGGWCCY 7 cut(s) 2217, 3462, 3770, 4052, 4691, 5334, 5419
PsrI GAACNNNNNNTAC 2 cut(s) 3735, 3767
PstI CTGCAG 2 cut(s) 600, 6085
PstNI CAGNNNCTG 2 cut(s) 3746, 4523
PsuI RGATCY 4 cut(s) 1621, 1764, 4156, 5318
PsyI GACNNNGTC 1 cut(s) 1053
PvuII CAGCTG 6 cut(s) 3617, 5237, 5288, 5867, 5960, 5969
RseI CAYNNNNRTG 6 cut(s) 438, 2493, 3483, 3507, 3642, 5000
SacI GAGCTC 2 cut(s) 2410, 2427
SapI GCTCTTC 2 cut(s) 1918, 1926
ScaI AGTACT 3 cut(s) 706, 3972, 4342
SduI GDGCHC 6 cut(s) 243, 627, 1309, 2410, 2427, 5529
SexAI ACCWGGT 1 cut(s) 4453
SfcI CTRYAG 7 cut(s) 596, 2785, 3738, 4626, 5148, 5358, 6081
SmaI CCCGGG 1 cut(s) 1619
SmiMI CAYNNNNRTG 6 cut(s) 438, 2493, 3483, 3507, 3642, 5000
SmlI CTYRAG 5 cut(s) 1308, 1724, 2131, 4164, 4504
SmoI CTYRAG 5 cut(s) 1308, 1724, 2131, 4164, 4504
SpeI ACTAGT 1 cut(s) 871
SphI GCATGC 1 cut(s) 2000
SseBI AGGCCT 2 cut(s) 166, 313
SstI GAGCTC 2 cut(s) 2410, 2427
StuI AGGCCT 2 cut(s) 166, 313
StyI CCWWGG 6 cut(s) 952, 1361, 2638, 2981, 4842, 5383
TaiI ACGT 8 cut(s) 1671, 3684, 4280, 4539, 4573, 5038, 5101, 5212
TaqII GACCGA 4 cut(s) 102, 532, 954, 5820
TatI WGTACW 6 cut(s) 704, 772, 2911, 3413, 3970, 4340
TauI GCSGC 1 cut(s) 88
TseFI GTSAC 9 cut(s) 1061, 1669, 2144, 2715, 2757, 2987, 4284, 5758, 5993
Tsp45I GTSAC 9 cut(s) 1061, 1669, 2144, 2715, 2757, 2987, 4284, 5758, 5993
TspGWI ACGGA 5 cut(s) 850, 1978, 2445, 3779, 5424
TspMI CCCGGG 1 cut(s) 1617
Tth111I GACNNNGTC 1 cut(s) 1053
Van91I CCANNNNNTGG 2 cut(s) 1190, 4871
XagI CCTNNNNNAGG 1 cut(s) 2710
XceI RCATGY 5 cut(s) 733, 1388, 2000, 3904, 5581
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XmaI CCCGGG 1 cut(s) 1617
XmiI GTMKAC 2 cut(s) 3947, 4625
XmnI GAANNNNTTC 5 cut(s) 1081, 3166, 3225, 4334, 5857
ZrmI AGTACT 3 cut(s) 706, 3972, 4342
Zsp2I ATGCAT 1 cut(s) 3300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.