MD02G1177800.v1.1

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0004633
Physical Location & Seq
Forward (+)
15718358 .. 15719956
1599 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1177800.v1.1.491

Sequence Viewer

Length: 1599 bp
ATGGTTGCTGTGTTCAACAAGGAGCTCCTGAGCTGGTACCTCATTACAGTCAAACTCCGAGAAACAGTGGAATCCGGAATTGCAAAGACTTCTACTTCCACAAACAGATCAATTGAACTGCCACACCAACATGTTCATCAGCAGCAGCAGCAACCGTCTGAGCCACTCCATATTGTGATCCAAAATGGTTGTGATCAGAAATTTGAAGAGGGACCCAAGTCGCCAGAATCCGAGTGGACGATCAACATCAAAGACAAACTTGATCAGGCCGGCCAGGACGACGCGGTGAGTTCGTGGGCAAAGCACTGCATTTACAAAGTCCCACATTACTTGAGAGAAGGTGATGATAAAGCCATTGTGCCTCAGATTGTGTCATTGGGGCCTTACCATCACGGCAAGAGGCGTCTTCGCCAAATGGACCGCCATAAATGGCGGTCGCTTCTTCGGATGCTGAAGCGGACAAACCAGTGCATAGAGCTGTATCTTAATTCTATAAAAGAAGTTGAAGAAAAGGCTCGAGCTTGCTATGAAGGGCCAGCTGCAATGGGGCTCAGCAGCAATGAGTTCGTTGAAATGATGGTGCTTGACGGTTGCTTTGTGCTCGAGCTGTTTCGCGGCGTTGGTGAGGGATTTAAGCAACTAGGTTACCCTCGAAATGATCCCATATTTGCAATGCGTGGGTCAATGCATTCGATTCAGAGGGACATGATCATGCTTGAGAATCAGCTTCCGCTTTTCATTCTTGATCGGTTATTAGGGCTGCAGTTGGGAGATCCTGAGCAGAAAGGACTTGTAGCTAAGCTAGCACTTCGGTTTTTCGATCCATTGATGCCAACTGACGAGCCATTGACAAAGAGCGATAGGAACAAACTCGAGTCATCGCTTGCATACGCAACCACGTTTGATCCGCTGTCTGAACAAGGTGGCCTTCATTGTCTTGACGTGTTCAGGCGAAGTCTATTGCGCACGGGGCTTCAGGCTGTGCCGAGAGTTTGGATCAAGAGATGGTCACACTCGAATCGGGTTGCAGATAAACGAAGGCAGCAATTGATTCATTGCGTTACGGAGCTCAAGGAGGCTGGGATCAAGTTCAAGAAAAGGAAGACGGATAGGTTTTGGGACGTGAAATTCGAGAATGGGATTCTTAAAATTCCCAGGCTCTTGATCCATGATGGTACCAAGTCTCTCTTCCTCAATCTGATTGCGTTTGAGCAGTGTCATCTGGATTGCAGCAATGACATAACATCCTACGTGATCTTCATGGACAACTTGATCAACTCTCCACAAGATGTAGGGTACCTCCATTATTGTGGAATAATTGAGCACTGGCTTGGCAGCGACGATGAGGTCGCTGACCTCTTTAACCGCCTCTGTCAAGAGGTGGTTTTCGATATCAATGACAGTTATCTCTCCCCATTGTCAGCGGATGTGAACCGCTACTACGACCACAGGTGGAACGCTTGGCGTGCCAGCTTAAAACATAACTACTTCAGCAATCCCTGGGCCATCCTCTCCTTCATCGCCGCTGTCGTGTTGTTGTTTCTCACTTTCGCACAGACCTTCTACGGAGTCTATGGCTATTACAGGCCGCCGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

533

Amino Acids

61.57

Weight (kDa)

7.62

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 104 - 515 1.3e-133 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1346
Acc16I TGCGCA 1 cut(s) 965
Acc65I GGTACC 3 cut(s) 36, 1175, 1296
AccB1I GGYRCC 3 cut(s) 36, 1175, 1296
AccII CGCG 2 cut(s) 284, 615
AccIII TCCGGA 1 cut(s) 74
AclWI GGATC 8 cut(s) 172, 653, 767, 815, 899, 1004, 1091, 1159
AcoI YGGCCR 1 cut(s) 271
AcsI RAATTY 3 cut(s) 200, 1127, 1149
AcuI CTGAAG 3 cut(s) 473, 959, 1474
AcyI GRCGYC 1 cut(s) 403
AfaI GTAC 3 cut(s) 38, 1177, 1298
AflIII ACRYGT 2 cut(s) 130, 942
AgsI TTSAA 6 cut(s) 16, 116, 206, 506, 572, 1093
AjiI CACGTC 2 cut(s) 943, 1123
AjnI CCWGG 3 cut(s) 273, 1154, 1499
AjuI GAANNNNNNNTTGG 2 cut(s) 1172, 1204
Alw21I GWGCWC 4 cut(s) 27, 603, 1071, 1326
Alw26I GTCTC 1 cut(s) 1188
AlwI GGATC 8 cut(s) 172, 653, 767, 815, 899, 1004, 1091, 1159
Ama87I CYCGRG 3 cut(s) 516, 602, 872
Aor13HI TCCGGA 1 cut(s) 74
AoxI GGCC 7 cut(s) 267, 271, 380, 533, 925, 1503, 1586
ApeKI GCWGC 9 cut(s) 142, 145, 148, 539, 555, 760, 1042, 1230, 1335
ApoI RAATTY 3 cut(s) 200, 1127, 1149
ArsI GACNNNNNNTTYG 4 cut(s) 578, 610, 1112, 1144
Asp718I GGTACC 3 cut(s) 36, 1175, 1296
AspLEI GCGC 1 cut(s) 966
AspS9I GGNCC 5 cut(s) 212, 380, 418, 533, 1503
AsuHPI GGTGA 3 cut(s) 298, 353, 635
AsuNHI GCTAGC 1 cut(s) 802
AvaI CYCGRG 3 cut(s) 516, 602, 872
AvaII GGWCC 2 cut(s) 212, 418
BanI GGYRCC 3 cut(s) 36, 1175, 1296
BanII GRGCYC 3 cut(s) 27, 552, 1071
BbsI GAAGAC 2 cut(s) 398, 1109
Bbv12I GWGCWC 4 cut(s) 27, 603, 1071, 1326
BbvI GCAGC 9 cut(s) 154, 157, 160, 526, 567, 747, 1054, 1242, 1347
BccI CCATC 5 cut(s) 396, 571, 999, 1166, 1514
BceAI ACGGC 1 cut(s) 409
BcgI CGANNNNNNTGC 2 cut(s) 547, 581
BciT130I CCWGG 3 cut(s) 275, 1156, 1501
BclI TGATCA 4 cut(s) 193, 262, 708, 1272
BcoDI GTCTC 1 cut(s) 1188
BfaI CTAG 2 cut(s) 641, 803
BfmI CTRYAG 1 cut(s) 761
BlpI GCTNAGC 2 cut(s) 551, 798
Bme1390I CCNGG 3 cut(s) 275, 1156, 1501
Bme18I GGWCC 2 cut(s) 212, 418
BmeT110I CYCGRG 3 cut(s) 516, 602, 872
BmgBI CACGTC 2 cut(s) 943, 1123
BmgT120I GGNCC 5 cut(s) 212, 380, 418, 533, 1503
BmiI GGNNCC 6 cut(s) 38, 213, 214, 381, 1177, 1298
BmrFI CCNGG 3 cut(s) 275, 1156, 1501
BmsI GCATC 2 cut(s) 438, 819
BmtI GCTAGC 1 cut(s) 806
BoxI GACNNNNGTC 1 cut(s) 217
BpiI GAAGAC 2 cut(s) 398, 1109
Bpu10I CCTNAGC 2 cut(s) 29, 777
Bpu1102I GCTNAGC 2 cut(s) 551, 798
BpuEI CTTGAG 3 cut(s) 352, 737, 1055
BsaAI YACGTR 1 cut(s) 1252
BsaBI GATNNNNATC 1 cut(s) 245
BsaHI GRCGYC 1 cut(s) 403
BsaJI CCNNGG 3 cut(s) 1154, 1499, 1500
BsaWI WCCGGW 1 cut(s) 74
Bse118I RCCGGY 1 cut(s) 269
Bse1I ACTGG 2 cut(s) 466, 1331
Bse3DI GCAATG 5 cut(s) 549, 565, 678, 1054, 1240
Bse8I GATNNNNATC 1 cut(s) 245
BseAI TCCGGA 1 cut(s) 74
BseBI CCWGG 3 cut(s) 275, 1156, 1501
BseDI CCNNGG 3 cut(s) 1154, 1499, 1500
BseGI GGATG 4 cut(s) 453, 1244, 1432, 1506
BseJI GATNNNNATC 1 cut(s) 245
BseMI GCAATG 5 cut(s) 549, 565, 678, 1054, 1240
BseMII CTCAG 5 cut(s) 20, 150, 377, 565, 768
BseNI ACTGG 2 cut(s) 466, 1331
BseXI GCAGC 9 cut(s) 154, 157, 160, 526, 567, 747, 1054, 1242, 1347
BseYI CCCAGC 1 cut(s) 1079
Bsh1236I CGCG 2 cut(s) 284, 615
Bsh1285I CGRYCG 1 cut(s) 437
BshFI GGCC 7 cut(s) 269, 273, 382, 535, 927, 1505, 1588
BshNI GGYRCC 3 cut(s) 36, 1175, 1296
BsiEI CGRYCG 1 cut(s) 437
BsiHKAI GWGCWC 4 cut(s) 27, 603, 1071, 1326
BsiHKCI CYCGRG 3 cut(s) 516, 602, 872
BsiSI CCGG 2 cut(s) 75, 270
BslFI GGGAC 4 cut(s) 225, 305, 716, 1133
BsmAI GTCTC 1 cut(s) 1188
BsmFI GGGAC 4 cut(s) 225, 305, 716, 1133
BsmI GAATGC 1 cut(s) 688
BsnI GGCC 7 cut(s) 269, 273, 382, 535, 927, 1505, 1588
BsoBI CYCGRG 3 cut(s) 516, 602, 872
Bsp1286I GDGCHC 5 cut(s) 27, 552, 603, 1071, 1326
Bsp13I TCCGGA 1 cut(s) 74
Bsp1720I GCTNAGC 2 cut(s) 551, 798
BspANI GGCC 7 cut(s) 269, 273, 382, 535, 927, 1505, 1588
BspCNI CTCAG 5 cut(s) 21, 151, 376, 564, 769
BspEI TCCGGA 1 cut(s) 74
BspFNI CGCG 2 cut(s) 284, 615
BspLI GGNNCC 6 cut(s) 38, 213, 214, 381, 1177, 1298
BspMAI CTGCAG 1 cut(s) 765
BspOI GCTAGC 1 cut(s) 806
BspPI GGATC 8 cut(s) 172, 653, 767, 815, 899, 1004, 1091, 1159
BspT107I GGYRCC 3 cut(s) 36, 1175, 1296
BsrDI GCAATG 5 cut(s) 549, 565, 678, 1054, 1240
BsrFI RCCGGY 1 cut(s) 269
BsrI ACTGG 2 cut(s) 466, 1331
BssAI RCCGGY 1 cut(s) 269
BssECI CCNNGG 3 cut(s) 1154, 1499, 1500
BssNI GRCGYC 1 cut(s) 403
Bst2UI CCWGG 3 cut(s) 275, 1156, 1501
Bst4CI ACNGT 5 cut(s) 49, 67, 156, 590, 1403
Bst6I CTCTTC 2 cut(s) 201, 1193
BstACI GRCGYC 1 cut(s) 403
BstBAI YACGTR 1 cut(s) 1252
BstC8I GCNNGC 7 cut(s) 271, 523, 537, 804, 885, 1467, 1471
BstDEI CTNAG 6 cut(s) 29, 159, 363, 551, 777, 798
BstEII GGTNACC 1 cut(s) 644
BstF5I GGATG 4 cut(s) 453, 1244, 1432, 1506
BstFNI CGCG 2 cut(s) 284, 615
BstHHI GCGC 1 cut(s) 966
BstMAI GTCTC 1 cut(s) 1188
BstMCI CGRYCG 1 cut(s) 437
BstMWI GCNNNNNNNGC 4 cut(s) 148, 803, 970, 1466
BstNI CCWGG 3 cut(s) 275, 1156, 1501
BstNSI RCATGY 1 cut(s) 134
BstPAI GACNNNNGTC 1 cut(s) 217
BstPI GGTNACC 1 cut(s) 644
BstSCI CCNGG 3 cut(s) 273, 1154, 1499
BstSFI CTRYAG 1 cut(s) 761
BstUI CGCG 2 cut(s) 284, 615
BstV1I GCAGC 9 cut(s) 154, 157, 160, 526, 567, 747, 1054, 1242, 1347
BstV2I GAAGAC 2 cut(s) 398, 1109
BstX2I RGATCY 1 cut(s) 772
BstXI CCANNNNNNTGG 1 cut(s) 1310
BstYI RGATCY 1 cut(s) 772
BsuRI GGCC 7 cut(s) 269, 273, 382, 535, 927, 1505, 1588
BtgZI GCGATG 2 cut(s) 864, 1504
BtrI CACGTC 2 cut(s) 943, 1123
BtsCI GGATG 4 cut(s) 453, 1244, 1432, 1506
BtsI GCAGTG 2 cut(s) 304, 1220
BtsIMutI CAGTG 5 cut(s) 72, 304, 473, 1220, 1324
Cac8I GCNNGC 7 cut(s) 271, 523, 537, 804, 885, 1467, 1471
CfoI GCGC 1 cut(s) 966
Cfr10I RCCGGY 1 cut(s) 269
Cfr13I GGNCC 5 cut(s) 212, 380, 418, 533, 1503
CseI GACGC 2 cut(s) 290, 392
Csp6I GTAC 3 cut(s) 37, 1176, 1297
CspCI CAANNNNNGTGG 2 cut(s) 312, 347
CviAII CATG 5 cut(s) 131, 706, 712, 1169, 1261
CviQI GTAC 3 cut(s) 37, 1176, 1297
DdeI CTNAG 6 cut(s) 29, 159, 363, 551, 777, 798
DrdI GACNNNNNNGTC 1 cut(s) 1346
DseDI GACNNNNNNGTC 1 cut(s) 1346
EaeI YGGCCR 1 cut(s) 271
Eam1104I CTCTTC 2 cut(s) 201, 1193
EarI CTCTTC 2 cut(s) 201, 1193
Ecl136II GAGCTC 2 cut(s) 25, 1069
Eco24I GRGCYC 3 cut(s) 27, 552, 1071
Eco32I GATATC 1 cut(s) 1393
Eco47I GGWCC 2 cut(s) 212, 418
Eco53kI GAGCTC 2 cut(s) 25, 1069
Eco57I CTGAAG 3 cut(s) 473, 959, 1474
Eco88I CYCGRG 3 cut(s) 516, 602, 872
Eco91I GGTNACC 1 cut(s) 644
EcoICRI GAGCTC 2 cut(s) 25, 1069
EcoO109I RGGNCCY 2 cut(s) 212, 380
EcoO65I GGTNACC 1 cut(s) 644
EcoRII CCWGG 3 cut(s) 273, 1154, 1499
EcoRV GATATC 1 cut(s) 1393
EcoT22I ATGCAT 1 cut(s) 690
EcoT38I GRGCYC 3 cut(s) 27, 552, 1071
FaeI CATG 5 cut(s) 134, 709, 715, 1172, 1264
FalI AAGNNNNNCTT 6 cut(s) 243, 275, 912, 944, 1172, 1204
FaqI GGGAC 4 cut(s) 225, 305, 716, 1133
FatI CATG 5 cut(s) 130, 705, 711, 1168, 1260
FbaI TGATCA 4 cut(s) 193, 262, 708, 1272
FokI GGATG 4 cut(s) 460, 1231, 1439, 1493
FriOI GRGCYC 3 cut(s) 27, 552, 1071
FseI GGCCGGCC 1 cut(s) 273
FspBI CTAG 2 cut(s) 641, 803
FspI TGCGCA 1 cut(s) 965
GlaI GCGC 1 cut(s) 965
GsaI CCCAGC 1 cut(s) 1083
HaeIII GGCC 7 cut(s) 269, 273, 382, 535, 927, 1505, 1588
HapII CCGG 2 cut(s) 75, 270
HgaI GACGC 2 cut(s) 290, 392
HhaI GCGC 1 cut(s) 966
Hin1I GRCGYC 1 cut(s) 403
Hin1II CATG 5 cut(s) 134, 709, 715, 1172, 1264
Hin6I GCGC 1 cut(s) 964
HinP1I GCGC 1 cut(s) 964
HinfI GANTC 9 cut(s) 71, 227, 694, 721, 875, 1018, 1051, 1141, 1569
HpaII CCGG 2 cut(s) 75, 270
HphI GGTGA 3 cut(s) 298, 353, 635
Hpy166II GTNNAC 2 cut(s) 237, 1432
Hpy188I TCNGA 9 cut(s) 59, 160, 198, 232, 366, 447, 699, 916, 1200
Hpy8I GTNNAC 2 cut(s) 237, 1432
Hpy99I CGWCG 2 cut(s) 284, 1343
HpyAV CCTTC 6 cut(s) 332, 524, 938, 1032, 1525, 1570
HpyCH4III ACNGT 5 cut(s) 49, 67, 156, 590, 1403
HpyCH4IV ACGT 4 cut(s) 899, 942, 1122, 1251
HpyF10VI GCNNNNNNNGC 4 cut(s) 148, 803, 970, 1466
HpyF3I CTNAG 6 cut(s) 29, 159, 363, 551, 777, 798
HpySE526I ACGT 4 cut(s) 899, 942, 1122, 1251
Hsp92I GRCGYC 1 cut(s) 403
Hsp92II CATG 5 cut(s) 134, 709, 715, 1172, 1264
HspAI GCGC 1 cut(s) 964
KflI GGGWCCC 1 cut(s) 212
Kpn2I TCCGGA 1 cut(s) 74
KpnI GGTACC 3 cut(s) 40, 1179, 1300
KroI GCCGGC 1 cut(s) 269
KroNI GCCGGC 1 cut(s) 271
Ksp22I TGATCA 4 cut(s) 193, 262, 708, 1272
LmnI GCTCC 3 cut(s) 22, 30, 1066
Lsp1109I GCAGC 9 cut(s) 154, 157, 160, 526, 567, 747, 1054, 1242, 1347
LweI GCATC 2 cut(s) 438, 819
MaeI CTAG 2 cut(s) 641, 803
MaeII ACGT 4 cut(s) 899, 942, 1122, 1251
MaeIII GTNAC 3 cut(s) 644, 1008, 1060
MboII GAAGA 7 cut(s) 218, 398, 434, 518, 1114, 1180, 1249
MfeI CAATTG 2 cut(s) 111, 1046
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 5 cut(s) 27, 552, 603, 1071, 1326
MluCI AATT 8 cut(s) 78, 111, 200, 487, 1046, 1127, 1149, 1317
MlyI GAGTC 2 cut(s) 884, 1578
Mph1103I ATGCAT 1 cut(s) 690
MroI TCCGGA 1 cut(s) 74
MroNI GCCGGC 1 cut(s) 269
MseI TTAA 5 cut(s) 486, 633, 1146, 1362, 1475
MslI CAYNNNNRTG 3 cut(s) 129, 710, 1308
MspA1I CMGCKG 4 cut(s) 539, 910, 1424, 1526
MspI CCGG 2 cut(s) 75, 270
MspR9I CCNGG 3 cut(s) 275, 1156, 1501
MunI CAATTG 2 cut(s) 111, 1046
Mva1269I GAATGC 1 cut(s) 688
MvaI CCWGG 3 cut(s) 275, 1156, 1501
MvnI CGCG 2 cut(s) 284, 615
MwoI GCNNNNNNNGC 4 cut(s) 148, 803, 970, 1466
NaeI GCCGGC 1 cut(s) 271
NgoMIV GCCGGC 1 cut(s) 269
NheI GCTAGC 1 cut(s) 802
NlaIII CATG 5 cut(s) 134, 709, 715, 1172, 1264
NlaIV GGNNCC 6 cut(s) 38, 213, 214, 381, 1177, 1298
NmeAIII GCCGAG 1 cut(s) 1011
NmuCI GTSAC 1 cut(s) 1008
NsbI TGCGCA 1 cut(s) 965
NsiI ATGCAT 1 cut(s) 690
NspI RCATGY 1 cut(s) 134
PaeR7I CTCGAG 3 cut(s) 516, 602, 872
PasI CCCWGGG 1 cut(s) 1500
PciI ACATGT 1 cut(s) 130
PcsI WCGNNNNNNNCGW 2 cut(s) 1128, 1527
PctI GAATGC 1 cut(s) 688
PdiI GCCGGC 1 cut(s) 271
PfeI GAWTC 7 cut(s) 71, 227, 694, 721, 1018, 1051, 1141
PleI GAGTC 2 cut(s) 883, 1577
PpsI GAGTC 2 cut(s) 883, 1577
Ppu21I YACGTR 1 cut(s) 1252
PpuMI RGGWCCY 1 cut(s) 212
PscI ACATGT 1 cut(s) 130
PshAI GACNNNNGTC 1 cut(s) 217
Psp124BI GAGCTC 2 cut(s) 27, 1071
Psp5II RGGWCCY 1 cut(s) 212
Psp6I CCWGG 3 cut(s) 273, 1154, 1499
PspEI GGTNACC 1 cut(s) 644
PspFI CCCAGC 1 cut(s) 1079
PspGI CCWGG 3 cut(s) 273, 1154, 1499
PspN4I GGNNCC 6 cut(s) 38, 213, 214, 381, 1177, 1298
PspPI GGNCC 5 cut(s) 212, 380, 418, 533, 1503
PspPPI RGGWCCY 1 cut(s) 212
PspXI VCTCGAGB 3 cut(s) 516, 602, 872
PsrI GAACNNNNNNTAC 2 cut(s) 1424, 1456
PstI CTGCAG 1 cut(s) 765
PsuI RGATCY 1 cut(s) 772
PvuII CAGCTG 1 cut(s) 539
RigI GGCCGGCC 1 cut(s) 273
RsaI GTAC 3 cut(s) 38, 1177, 1298
RsaNI GTAC 3 cut(s) 37, 1176, 1297
RseI CAYNNNNRTG 3 cut(s) 129, 710, 1308
SacI GAGCTC 2 cut(s) 27, 1071
SaqAI TTAA 5 cut(s) 486, 633, 1146, 1362, 1475
Sau96I GGNCC 5 cut(s) 212, 380, 418, 533, 1503
SchI GAGTC 2 cut(s) 884, 1578
ScrFI CCNGG 3 cut(s) 275, 1156, 1501
SduI GDGCHC 5 cut(s) 27, 552, 603, 1071, 1326
SfaNI GCATC 2 cut(s) 438, 819
SfcI CTRYAG 1 cut(s) 761
Sfr274I CTCGAG 3 cut(s) 516, 602, 872
SinI GGWCC 2 cut(s) 212, 418
SlaI CTCGAG 3 cut(s) 516, 602, 872
SmiMI CAYNNNNRTG 3 cut(s) 129, 710, 1308
SmlI CTYRAG 6 cut(s) 331, 516, 602, 716, 872, 1070
SmoI CTYRAG 6 cut(s) 331, 516, 602, 716, 872, 1070
Sse9I AATT 8 cut(s) 78, 111, 200, 487, 1046, 1127, 1149, 1317
SspMI CTAG 2 cut(s) 641, 803
SstI GAGCTC 2 cut(s) 27, 1071
StyD4I CCNGG 3 cut(s) 273, 1154, 1499
TaaI ACNGT 5 cut(s) 49, 67, 156, 590, 1403
TaiI ACGT 4 cut(s) 902, 945, 1125, 1254
TaqI TCGA 9 cut(s) 517, 603, 652, 692, 819, 873, 1016, 1131, 1389
TasI AATT 8 cut(s) 78, 111, 200, 487, 1046, 1127, 1149, 1317
TauI GCSGC 3 cut(s) 618, 1526, 1591
TfiI GAWTC 7 cut(s) 71, 227, 694, 721, 1018, 1051, 1141
Tru1I TTAA 5 cut(s) 486, 633, 1146, 1362, 1475
Tru9I TTAA 5 cut(s) 486, 633, 1146, 1362, 1475
TscAI CASTG 5 cut(s) 72, 311, 473, 1220, 1331
TseFI GTSAC 1 cut(s) 1008
TseI GCWGC 9 cut(s) 142, 145, 148, 539, 555, 760, 1042, 1230, 1335
Tsp45I GTSAC 1 cut(s) 1008
TspDTI ATGAA 7 cut(s) 125, 543, 727, 920, 1043, 1249, 1507
TspGWI ACGGA 3 cut(s) 1079, 1121, 1581
TspRI CASTG 5 cut(s) 72, 311, 473, 1220, 1331
VpaK11BI GGWCC 2 cut(s) 212, 418
XapI RAATTY 3 cut(s) 200, 1127, 1149
XceI RCATGY 1 cut(s) 134
XcmI CCANNNNNNNNNTGG 1 cut(s) 231
XhoI CTCGAG 3 cut(s) 516, 602, 872
XspI CTAG 2 cut(s) 641, 803
Zsp2I ATGCAT 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.