Prupe.6G230300_v2.0.a1

UPF0481 protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
23338285 .. 23339889
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G230300.1

Sequence Viewer

Length: 1605 bp
ATGGTTGCTGTCTTCAACAAAGAGCTCTTGAGCTGGTACCTCATCACAGTCAAACTCAGAGAAACAGTAGAGTCTGGAATTGCAACAACTCCTACCTCCACAAACAGATCCATTGAATTGCCAGAACAAGCTCATCAGCAGGTGCAGAAACAAGAGCAGCAACCATCGCCCCTCCAAATTGTGATCCAAAATGGTGGTGATAAAAAATATGAAGATGGACCGAAGTCACCAGATTCCGAGTGGGTGATCAACATCAAAGACAAACTTGAACAAGCCGGTCAAGACGATGCAGCAGGTACATGGGCAAAGCTCTGCATCTACAGAGTCCCCCATTACCTAAGAGAAGGTGATGACAAAGCCATTGTCCCTCAGATTGTGTCATTGGGGCCTTACCACCATGGCAGGAGACGCCTTCGCCAAATGGATCGCCACAAATGGCGTTCGCTTCACCACATGCTCAAGCGTAACAACCAGAACATACAGCTCTATCTGGATTCTATAAAAGAAGTTGAAGAGAAGGCCCGTGCTTGCTATGAAGGACCAGTTGCAATGGGGATCAGCAGCAATGAGTTTGTTGAAATGATGGTGCTTGATGGTTGCTTTGTGCTGGAGCTGTTTCGTGGTGCAGCTGAGGGGTTTAAGCAACTGGGGTACCCTCGAAATGATCCCATCTTTGCAATGCGTGGTTCGATGCATTCGATTCAGAGAGACATGATCATGCTCGAGAATCAGCTTCCACTTTTCATCCTTGATAGGCTGTTGGGGCTGCAGTTTGGAGATCCTGAGCAGAAAGGACTTGTAGCCAAGCTAGCACTTCGGTTTTTTGATCCTTTAATGCCAACAGATGAGCCGTTAACAAAGAGTGATAGAAGCAAACTTGAGTCTTCACTTGGATATGCAAACACCTTTGATCCACTCTCTGATCAAGGTGGCCTTCATTGCCTTGATGTGTTCAGGCGAAGTCTATTACGCAGAGGGCTTCAGCCTACACCGAGAGTTTGGATCAAGAAATGGTCACACGCCAATCGGGTTGCTGATAAGCGGAGGCAACAGTTGATTCATTGTGTTACAGAGCTTAGGGAGGCTGGGATCAAGTTCAAGAAAAGGAAGACAGATCGGTTCTGGGATGTCAAGTTCGAGAATGGGATTCTAAGAATTCCTAGGCTCTTGATCCATGATGGAACCAAGTCTCTTTTTCTCAATCTTATTGCGTTTGAGCAGTGTCATCTTGATTGCAGCAATGACATTACTTCCTATGTGATCTTCATGGACAACTTGATCAACTCTCCACAGGATGTGGGGTACCTCCATTATTGTGGAATTATTGAGCACTGGCTTGGCAGCGATGCTGAGGTTGCTGACCTATTTAACCGACTTTGTCAAGAGGTGGTTTTCGATATTAATGACAGTTATCTTTCTCGTCTGTCGGAGGATGTAAACCGCTACTACAACCACAGGTGGAATGCTTGGCGTGCCAGTTTGAAGCATAACTACTTCAACAATCCATGGGCCACCCTCTCCTTCGTTGCCGCTGTCGTCTTGTTGTTTCTCACTTTTGCGCAGACCTTCTACGGAGTATATGGCTATTACAGGCCACCAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

535

Amino Acids

61.87

Weight (kDa)

8.24

Isoelectric Point (pI)

47.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 130
Acc16I TGCGCA 1 cut(s) 1560
Acc36I ACCTGC 2 cut(s) 130, 284
Acc65I GGTACC 3 cut(s) 36, 651, 1302
AccB1I GGYRCC 3 cut(s) 36, 651, 1302
AciI CCGC 3 cut(s) 1042, 1441, 1530
AcsI RAATTY 1 cut(s) 1155
AcuI CTGAAG 1 cut(s) 965
AcyI GRCGYC 1 cut(s) 409
AfaI GTAC 4 cut(s) 38, 298, 653, 1304
AgsI TTSAA 8 cut(s) 16, 116, 269, 512, 578, 1099, 1483, 1498
AloI GAACNNNNNNTCC 2 cut(s) 1118, 1150
Alw21I GWGCWC 2 cut(s) 27, 1332
Alw26I GTCTC 3 cut(s) 400, 702, 1194
Ama87I CYCGRG 1 cut(s) 722
AoxI GGCC 5 cut(s) 386, 519, 931, 1509, 1592
ApeKI GCWGC 7 cut(s) 157, 290, 561, 626, 766, 1236, 1341
ApoI RAATTY 1 cut(s) 1155
ArsI GACNNNNNNTTYG 2 cut(s) 348, 380
AseI ATTAAT 1 cut(s) 1401
Asp718I GGTACC 3 cut(s) 36, 651, 1302
AspA2I CCTAGG 1 cut(s) 1160
AspLEI GCGC 1 cut(s) 1561
AspS9I GGNCC 5 cut(s) 218, 386, 520, 539, 1509
AsuHPI GGTGA 5 cut(s) 209, 219, 256, 359, 440
AsuNHI GCTAGC 1 cut(s) 808
AvaI CYCGRG 1 cut(s) 722
AvaII GGWCC 2 cut(s) 218, 539
AvrII CCTAGG 1 cut(s) 1160
BaeI ACNNNNGTAYC 2 cut(s) 635, 668
BanI GGYRCC 3 cut(s) 36, 651, 1302
BanII GRGCYC 1 cut(s) 27
BarI GAAGNNNNNNTAC 2 cut(s) 1475, 1507
BbsI GAAGAC 3 cut(s) 4, 876, 1115
Bbv12I GWGCWC 2 cut(s) 27, 1332
BbvCI CCTCAGC 2 cut(s) 630, 1350
BbvI GCAGC 7 cut(s) 169, 302, 573, 638, 753, 1248, 1353
BccI CCATC 6 cut(s) 172, 209, 577, 587, 677, 1172
BceAI ACGGC 1 cut(s) 835
BclI TGATCA 4 cut(s) 246, 714, 922, 1278
BcoDI GTCTC 3 cut(s) 400, 702, 1194
BfaI CTAG 2 cut(s) 809, 1161
BfmI CTRYAG 2 cut(s) 319, 767
BfuAI ACCTGC 2 cut(s) 130, 284
BisI GCNGC 8 cut(s) 158, 291, 562, 627, 767, 1237, 1342, 1530
BlnI CCTAGG 1 cut(s) 1160
BlsI GCNGC 8 cut(s) 159, 292, 563, 628, 768, 1238, 1343, 1531
Bme18I GGWCC 2 cut(s) 218, 539
BmeT110I CYCGRG 1 cut(s) 722
BmgT120I GGNCC 5 cut(s) 218, 386, 520, 539, 1509
BmiI GGNNCC 5 cut(s) 38, 387, 653, 1183, 1304
BmrI ACTGGG 1 cut(s) 656
BmsI GCATC 4 cut(s) 277, 324, 681, 1336
BmtI GCTAGC 1 cut(s) 812
BmuI ACTGGG 1 cut(s) 656
BoxI GACNNNNGTC 1 cut(s) 223
BpiI GAAGAC 3 cut(s) 4, 876, 1115
BpmI CTGGAG 1 cut(s) 629
Bpu10I CCTNAGC 4 cut(s) 630, 783, 1076, 1350
BpuEI CTTGAG 3 cut(s) 49, 443, 899
BsaBI GATNNNNATC 1 cut(s) 251
BsaHI GRCGYC 1 cut(s) 409
BsaJI CCNNGG 3 cut(s) 397, 1160, 1505
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 4 cut(s) 542, 651, 1337, 1476
Bse3DI GCAATG 5 cut(s) 555, 571, 684, 937, 1246
Bse8I GATNNNNATC 1 cut(s) 251
BseDI CCNNGG 3 cut(s) 397, 1160, 1505
BseGI GGATG 4 cut(s) 744, 1132, 1300, 1438
BseJI GATNNNNATC 1 cut(s) 251
BseMI GCAATG 5 cut(s) 555, 571, 684, 937, 1246
BseMII CTCAG 5 cut(s) 70, 383, 621, 774, 1341
BseNI ACTGG 4 cut(s) 542, 651, 1337, 1476
BseXI GCAGC 7 cut(s) 169, 302, 573, 638, 753, 1248, 1353
BseYI CCCAGC 1 cut(s) 1085
BsgI GTGCAG 2 cut(s) 164, 645
BshFI GGCC 5 cut(s) 388, 521, 933, 1511, 1594
BshNI GGYRCC 3 cut(s) 36, 651, 1302
BsiHKAI GWGCWC 2 cut(s) 27, 1332
BsiHKCI CYCGRG 1 cut(s) 722
BsiSI CCGG 1 cut(s) 276
BslFI GGGAC 2 cut(s) 311, 350
BsmAI GTCTC 3 cut(s) 400, 702, 1194
BsmBI CGTCTC 1 cut(s) 400
BsmFI GGGAC 2 cut(s) 311, 350
BsmI GAATGC 2 cut(s) 694, 1468
BsnI GGCC 5 cut(s) 388, 521, 933, 1511, 1594
BsoBI CYCGRG 1 cut(s) 722
Bsp1286I GDGCHC 2 cut(s) 27, 1332
Bsp19I CCATGG 2 cut(s) 397, 1505
BspACI CCGC 3 cut(s) 1042, 1441, 1530
BspANI GGCC 5 cut(s) 388, 521, 933, 1511, 1594
BspCNI CTCAG 5 cut(s) 69, 382, 622, 775, 1342
BspLI GGNNCC 5 cut(s) 38, 387, 653, 1183, 1304
BspMAI CTGCAG 1 cut(s) 771
BspMI ACCTGC 2 cut(s) 130, 284
BspOI GCTAGC 1 cut(s) 812
BspT107I GGYRCC 3 cut(s) 36, 651, 1302
BsrDI GCAATG 5 cut(s) 555, 571, 684, 937, 1246
BsrFI RCCGGY 1 cut(s) 275
BsrI ACTGG 4 cut(s) 542, 651, 1337, 1476
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 3 cut(s) 397, 1160, 1505
BssNI GRCGYC 1 cut(s) 409
BssT1I CCWWGG 3 cut(s) 397, 1160, 1505
Bst4CI ACNGT 4 cut(s) 49, 67, 1053, 1409
Bst6I CTCTTC 1 cut(s) 507
BstACI GRCGYC 1 cut(s) 409
BstC8I GCNNGC 3 cut(s) 529, 810, 1473
BstDEI CTNAG 8 cut(s) 56, 338, 369, 630, 783, 1076, 1151, 1350
BstDSI CCRYGG 2 cut(s) 397, 1505
BstF5I GGATG 4 cut(s) 744, 1132, 1300, 1438
BstHHI GCGC 1 cut(s) 1561
BstMAI GTCTC 3 cut(s) 400, 702, 1194
BstMWI GCNNNNNNNGC 7 cut(s) 166, 408, 763, 809, 939, 1355, 1472
BstNSI RCATGY 1 cut(s) 457
BstPAI GACNNNNGTC 1 cut(s) 223
BstSFI CTRYAG 2 cut(s) 319, 767
BstV1I GCAGC 7 cut(s) 169, 302, 573, 638, 753, 1248, 1353
BstV2I GAAGAC 3 cut(s) 4, 876, 1115
BstX2I RGATCY 2 cut(s) 107, 778
BstXI CCANNNNNNTGG 2 cut(s) 194, 1316
BstYI RGATCY 2 cut(s) 107, 778
BsuRI GGCC 5 cut(s) 388, 521, 933, 1511, 1594
BtgI CCRYGG 2 cut(s) 397, 1505
BtgZI GCGATG 2 cut(s) 150, 1359
BtsCI GGATG 4 cut(s) 744, 1132, 1300, 1438
BtsI GCAGTG 1 cut(s) 1226
BtsIMutI CAGTG 2 cut(s) 1226, 1330
BveI ACCTGC 2 cut(s) 130, 284
Cac8I GCNNGC 3 cut(s) 529, 810, 1473
CfoI GCGC 1 cut(s) 1561
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 5 cut(s) 218, 386, 520, 539, 1509
CseI GACGC 1 cut(s) 417
Csp6I GTAC 4 cut(s) 37, 297, 652, 1303
CviAII CATG 8 cut(s) 300, 398, 454, 712, 718, 1175, 1267, 1506
CviQI GTAC 4 cut(s) 37, 297, 652, 1303
DdeI CTNAG 8 cut(s) 56, 338, 369, 630, 783, 1076, 1151, 1350
Eam1104I CTCTTC 1 cut(s) 507
EarI CTCTTC 1 cut(s) 507
Ecl136II GAGCTC 1 cut(s) 25
Eco130I CCWWGG 3 cut(s) 397, 1160, 1505
Eco24I GRGCYC 1 cut(s) 27
Eco47I GGWCC 2 cut(s) 218, 539
Eco53kI GAGCTC 1 cut(s) 25
Eco57I CTGAAG 1 cut(s) 965
Eco88I CYCGRG 1 cut(s) 722
EcoICRI GAGCTC 1 cut(s) 25
EcoO109I RGGNCCY 1 cut(s) 386
EcoRI GAATTC 1 cut(s) 1155
EcoT14I CCWWGG 3 cut(s) 397, 1160, 1505
EcoT22I ATGCAT 1 cut(s) 696
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 3 cut(s) 397, 1160, 1505
Esp3I CGTCTC 1 cut(s) 400
FaeI CATG 8 cut(s) 303, 401, 457, 715, 721, 1178, 1270, 1509
FalI AAGNNNNNCTT 4 cut(s) 249, 281, 918, 950
FaqI GGGAC 2 cut(s) 311, 350
FatI CATG 8 cut(s) 299, 397, 453, 711, 717, 1174, 1266, 1505
FbaI TGATCA 4 cut(s) 246, 714, 922, 1278
Fnu4HI GCNGC 8 cut(s) 158, 291, 562, 627, 767, 1237, 1342, 1530
FokI GGATG 4 cut(s) 731, 1139, 1307, 1445
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 8 cut(s) 158, 291, 562, 627, 767, 1237, 1342, 1530
FspBI CTAG 2 cut(s) 809, 1161
FspI TGCGCA 1 cut(s) 1560
GlaI GCGC 1 cut(s) 1560
GluI GCNGC 8 cut(s) 158, 291, 562, 627, 767, 1237, 1342, 1530
GsaI CCCAGC 1 cut(s) 1089
GsuI CTGGAG 1 cut(s) 629
HaeIII GGCC 5 cut(s) 388, 521, 933, 1511, 1594
HapII CCGG 1 cut(s) 276
HgaI GACGC 1 cut(s) 417
HhaI GCGC 1 cut(s) 1561
Hin1I GRCGYC 1 cut(s) 409
Hin1II CATG 8 cut(s) 303, 401, 457, 715, 721, 1178, 1270, 1509
Hin6I GCGC 1 cut(s) 1559
HinP1I GCGC 1 cut(s) 1559
HincII GTYRAC 1 cut(s) 855
HindII GTYRAC 1 cut(s) 855
HinfI GANTC 9 cut(s) 71, 233, 324, 494, 700, 727, 881, 1057, 1147
HpaI GTTAAC 1 cut(s) 855
HpaII CCGG 1 cut(s) 276
HphI GGTGA 5 cut(s) 209, 219, 256, 359, 440
Hpy166II GTNNAC 2 cut(s) 855, 1438
Hpy188I TCNGA 6 cut(s) 59, 238, 372, 705, 922, 1429
Hpy8I GTNNAC 2 cut(s) 855, 1438
HpyAV CCTTC 7 cut(s) 338, 422, 511, 530, 944, 1531, 1576
HpyCH4III ACNGT 4 cut(s) 49, 67, 1053, 1409
HpyF10VI GCNNNNNNNGC 7 cut(s) 166, 408, 763, 809, 939, 1355, 1472
HpyF3I CTNAG 8 cut(s) 56, 338, 369, 630, 783, 1076, 1151, 1350
Hsp92I GRCGYC 1 cut(s) 409
Hsp92II CATG 8 cut(s) 303, 401, 457, 715, 721, 1178, 1270, 1509
HspAI GCGC 1 cut(s) 1559
KpnI GGTACC 3 cut(s) 40, 655, 1306
Ksp22I TGATCA 4 cut(s) 246, 714, 922, 1278
KspAI GTTAAC 1 cut(s) 855
LmnI GCTCC 1 cut(s) 610
Lsp1109I GCAGC 7 cut(s) 169, 302, 573, 638, 753, 1248, 1353
LweI GCATC 4 cut(s) 277, 324, 681, 1336
MaeI CTAG 2 cut(s) 809, 1161
MaeIII GTNAC 4 cut(s) 225, 464, 1014, 1066
MboII GAAGA 6 cut(s) 4, 224, 524, 876, 1120, 1255
MflI RGATCY 2 cut(s) 107, 778
MhlI GDGCHC 2 cut(s) 27, 1332
MluCI AATT 5 cut(s) 78, 116, 177, 1155, 1320
MlyI GAGTC 3 cut(s) 80, 333, 890
MmeI TCCRAC 1 cut(s) 1407
Mph1103I ATGCAT 1 cut(s) 696
MseI TTAA 5 cut(s) 639, 833, 854, 1368, 1401
MslI CAYNNNNRTG 2 cut(s) 716, 1314
MspA1I CMGCKG 2 cut(s) 629, 1532
MspI CCGG 1 cut(s) 276
Mva1269I GAATGC 2 cut(s) 694, 1468
MwoI GCNNNNNNNGC 7 cut(s) 166, 408, 763, 809, 939, 1355, 1472
NcoI CCATGG 2 cut(s) 397, 1505
NheI GCTAGC 1 cut(s) 808
NlaIII CATG 8 cut(s) 303, 401, 457, 715, 721, 1178, 1270, 1509
NlaIV GGNNCC 5 cut(s) 38, 387, 653, 1183, 1304
NmuCI GTSAC 2 cut(s) 225, 1014
NsbI TGCGCA 1 cut(s) 1560
NsiI ATGCAT 1 cut(s) 696
NspI RCATGY 1 cut(s) 457
PaeR7I CTCGAG 1 cut(s) 722
PaqCI CACCTGC 1 cut(s) 130
PcsI WCGNNNNNNNCGW 1 cut(s) 695
PctI GAATGC 2 cut(s) 694, 1468
PfeI GAWTC 6 cut(s) 233, 494, 700, 727, 1057, 1147
PflFI GACNNNGTC 1 cut(s) 1377
PkrI GCNGC 8 cut(s) 159, 292, 563, 628, 768, 1238, 1343, 1531
PleI GAGTC 3 cut(s) 79, 332, 889
PpsI GAGTC 3 cut(s) 79, 332, 889
PshAI GACNNNNGTC 1 cut(s) 223
PshBI ATTAAT 1 cut(s) 1401
Psp124BI GAGCTC 1 cut(s) 27
PspFI CCCAGC 1 cut(s) 1085
PspN4I GGNNCC 5 cut(s) 38, 387, 653, 1183, 1304
PspPI GGNCC 5 cut(s) 218, 386, 520, 539, 1509
PstI CTGCAG 1 cut(s) 771
PsuI RGATCY 2 cut(s) 107, 778
PsyI GACNNNGTC 1 cut(s) 1377
PvuII CAGCTG 1 cut(s) 629
RsaI GTAC 4 cut(s) 38, 298, 653, 1304
RsaNI GTAC 4 cut(s) 37, 297, 652, 1303
RseI CAYNNNNRTG 2 cut(s) 716, 1314
SacI GAGCTC 1 cut(s) 27
SaqAI TTAA 5 cut(s) 639, 833, 854, 1368, 1401
SatI GCNGC 8 cut(s) 158, 291, 562, 627, 767, 1237, 1342, 1530
Sau96I GGNCC 5 cut(s) 218, 386, 520, 539, 1509
SchI GAGTC 3 cut(s) 80, 333, 890
SduI GDGCHC 2 cut(s) 27, 1332
SfaNI GCATC 4 cut(s) 277, 324, 681, 1336
SfcI CTRYAG 2 cut(s) 319, 767
Sfr274I CTCGAG 1 cut(s) 722
SinI GGWCC 2 cut(s) 218, 539
SlaI CTCGAG 1 cut(s) 722
SmiMI CAYNNNNRTG 2 cut(s) 716, 1314
SmlI CTYRAG 4 cut(s) 28, 458, 722, 878
SmoI CTYRAG 4 cut(s) 28, 458, 722, 878
Sse9I AATT 5 cut(s) 78, 116, 177, 1155, 1320
SsiI CCGC 3 cut(s) 1042, 1441, 1530
SspMI CTAG 2 cut(s) 809, 1161
SstI GAGCTC 1 cut(s) 27
StyI CCWWGG 3 cut(s) 397, 1160, 1505
TaaI ACNGT 4 cut(s) 49, 67, 1053, 1409
TaqI TCGA 6 cut(s) 658, 689, 698, 723, 1137, 1395
TaqII GACCGA 1 cut(s) 235
TasI AATT 5 cut(s) 78, 116, 177, 1155, 1320
TauI GCSGC 1 cut(s) 1532
TfiI GAWTC 6 cut(s) 233, 494, 700, 727, 1057, 1147
Tru1I TTAA 5 cut(s) 639, 833, 854, 1368, 1401
Tru9I TTAA 5 cut(s) 639, 833, 854, 1368, 1401
TscAI CASTG 2 cut(s) 1226, 1337
TseFI GTSAC 2 cut(s) 225, 1014
TseI GCWGC 7 cut(s) 157, 290, 561, 626, 766, 1236, 1341
Tsp45I GTSAC 2 cut(s) 225, 1014
TspDTI ATGAA 6 cut(s) 225, 549, 733, 926, 1049, 1255
TspGWI ACGGA 1 cut(s) 1587
TspRI CASTG 2 cut(s) 1226, 1337
Tth111I GACNNNGTC 1 cut(s) 1377
VpaK11BI GGWCC 2 cut(s) 218, 539
VspI ATTAAT 1 cut(s) 1401
XapI RAATTY 1 cut(s) 1155
XceI RCATGY 1 cut(s) 457
XcmI CCANNNNNNNNNTGG 1 cut(s) 237
XhoI CTCGAG 1 cut(s) 722
XmaJI CCTAGG 1 cut(s) 1160
XspI CTAG 2 cut(s) 809, 1161
Zsp2I ATGCAT 1 cut(s) 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.