MD02G1261800.v1.1

it plays a direct role in the translocation of protons across the membrane

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
31612778 .. 31612951
174 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1261800.v1.1.491

Sequence Viewer

Length: 174 bp
ATGGTCCATGGGTTCCTTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAAGGAGCTCTTTTACCTTGGAAAATCATGCAGTTACCTCATGAGAAGTTAGCCGTACCCACAAATGATATAAATATTACGGTTGCTTTAGTTTTACTCACTTCAATAGCATAG

Protein Analysis

58

Amino Acids

6.44

Weight (kDa)

6.69

Isoelectric Point (pI)

22.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017493)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 117
AfiI CCNNNNNNNGG 1 cut(s) 22
AgsI TTSAA 1 cut(s) 165
AluBI AGCT 1 cut(s) 68
AluI AGCT 1 cut(s) 68
Alw21I GWGCWC 1 cut(s) 70
AspS9I GGNCC 1 cut(s) 4
AsuII TTCGAA 1 cut(s) 52
AvaII GGWCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 70
BceAI ACGGC 1 cut(s) 98
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 14
Bpu14I TTCGAA 1 cut(s) 52
BsaJI CCNNGG 2 cut(s) 7, 77
Bsc4I CCNNNNNNNGG 1 cut(s) 22
BseDI CCNNGG 2 cut(s) 7, 77
BseLI CCNNNNNNNGG 1 cut(s) 22
BsiHKAI GWGCWC 1 cut(s) 70
BslI CCNNNNNNNGG 1 cut(s) 22
Bsp119I TTCGAA 1 cut(s) 52
Bsp1286I GDGCHC 1 cut(s) 70
Bsp19I CCATGG 1 cut(s) 7
BspHI TCATGA 1 cut(s) 100
BspLI GGNNCC 1 cut(s) 14
BspT104I TTCGAA 1 cut(s) 52
BssECI CCNNGG 2 cut(s) 7, 77
BssT1I CCWWGG 2 cut(s) 7, 77
Bst4CI ACNGT 1 cut(s) 142
BstBI TTCGAA 1 cut(s) 52
BstDSI CCRYGG 1 cut(s) 7
BtgI CCRYGG 1 cut(s) 7
CciI TCATGA 1 cut(s) 100
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 1 cut(s) 116
CviAII CATG 3 cut(s) 8, 88, 101
CviJI RGCY 2 cut(s) 68, 113
CviKI_1 RGCY 2 cut(s) 68, 113
CviQI GTAC 1 cut(s) 116
Ecl136II GAGCTC 1 cut(s) 68
Eco130I CCWWGG 2 cut(s) 7, 77
Eco24I GRGCYC 1 cut(s) 70
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 68
EcoICRI GAGCTC 1 cut(s) 68
EcoT14I CCWWGG 2 cut(s) 7, 77
EcoT38I GRGCYC 1 cut(s) 70
ErhI CCWWGG 2 cut(s) 7, 77
FaeI CATG 3 cut(s) 11, 91, 104
FaiI YATR 6 cut(s) 9, 31, 89, 102, 131, 172
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FatI CATG 3 cut(s) 7, 87, 100
FriOI GRGCYC 1 cut(s) 70
Hin1II CATG 3 cut(s) 11, 91, 104
Hpy188III TCNNGA 1 cut(s) 101
HpyCH4III ACNGT 1 cut(s) 142
HpyCH4V TGCA 1 cut(s) 91
Hsp92II CATG 3 cut(s) 11, 91, 104
LmnI GCTCC 1 cut(s) 65
MaeIII GTNAC 1 cut(s) 93
MhlI GDGCHC 1 cut(s) 70
MluCI AATT 1 cut(s) 54
MnlI CCTC 1 cut(s) 108
NcoI CCATGG 1 cut(s) 7
NlaIII CATG 3 cut(s) 11, 91, 104
NlaIV GGNNCC 1 cut(s) 14
NspV TTCGAA 1 cut(s) 52
PagI TCATGA 1 cut(s) 100
Psp124BI GAGCTC 1 cut(s) 70
PspN4I GGNNCC 1 cut(s) 14
PspPI GGNCC 1 cut(s) 4
RsaI GTAC 1 cut(s) 117
RsaNI GTAC 1 cut(s) 116
SacI GAGCTC 1 cut(s) 70
Sau96I GGNCC 1 cut(s) 4
SduI GDGCHC 1 cut(s) 70
SetI ASST 3 cut(s) 70, 79, 100
SfuI TTCGAA 1 cut(s) 52
SgeI CNNG 5 cut(s) 20, 74, 90, 100, 113
SinI GGWCC 1 cut(s) 4
Sse9I AATT 1 cut(s) 54
SspI AATATT 1 cut(s) 136
SstI GAGCTC 1 cut(s) 70
StyI CCWWGG 2 cut(s) 7, 77
TaaI ACNGT 1 cut(s) 142
TaqI TCGA 1 cut(s) 52
TasI AATT 1 cut(s) 54
VpaK11BI GGWCC 1 cut(s) 4
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.