RNA polymerase Rpb1, domain 5
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00150 |
| malus_domestica | MD02G1261800.v1.1 MD16G1100100.v1.1 MD16G1263300.v1.1 |
| pyrus_communis | pycom08g10380 |
| rosa_chinensis | RchiOBHm_Chr2g0129011 RchiOBHm_CPg0502431 |
| rosa_laevigata | RLG00000004365 RLG00000004453 |
| rosa_rugosa | Rorug02G0490900 |
| rosa_samantha | Rh2BG343800 Rh6AG047100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 157, 179 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 149 |
| AgsI | TTSAA | 3 cut(s) | 11, 167, 179 |
| AluBI | AGCT | 1 cut(s) | 119 |
| AluI | AGCT | 1 cut(s) | 119 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApoI | RAATTY | 2 cut(s) | 157, 179 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 58, 90 |
| BfaI | CTAG | 1 cut(s) | 54 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 149 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 5 |
| Bst4CI | ACNGT | 1 cut(s) | 152 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 116 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CviJI | RGCY | 3 cut(s) | 5, 110, 119 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 110, 119 |
| EcoRI | GAATTC | 1 cut(s) | 179 |
| FaiI | YATR | 2 cut(s) | 116, 171 |
| FspBI | CTAG | 1 cut(s) | 54 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hpy188I | TCNGA | 1 cut(s) | 156 |
| HpyAV | CCTTC | 1 cut(s) | 17 |
| HpyCH4III | ACNGT | 1 cut(s) | 152 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 116 |
| LmnI | GCTCC | 1 cut(s) | 38 |
| MaeI | CTAG | 1 cut(s) | 54 |
| MluCI | AATT | 3 cut(s) | 87, 157, 179 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 116 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SetI | ASST | 2 cut(s) | 106, 121 |
| SgeI | CNNG | 4 cut(s) | 47, 58, 66, 90 |
| Sse9I | AATT | 3 cut(s) | 87, 157, 179 |
| SspMI | CTAG | 1 cut(s) | 54 |
| TaaI | ACNGT | 1 cut(s) | 152 |
| TasI | AATT | 3 cut(s) | 87, 157, 179 |
| TspDTI | ATGAA | 1 cut(s) | 84 |
| XapI | RAATTY | 2 cut(s) | 157, 179 |
| XspI | CTAG | 1 cut(s) | 54 |