Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0004590

Physical Location & Seq

Genomic Coordinates Forward (+)

34254855 .. 34259139

Gene Structure 4285 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1285400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGAGCAAAGAGTTCAGATTCATTTTAAAGGCCTGGGAAGCAACTCTGCGCAAAACACACACTGGTGGAAAGAAAAGGGCCAACCCTTTATTCACAACAATGTCCGTAGCCCCTGCAGATCATGAGCCTGGTGAAATCTATCAGGACGAGAAGGTCCTCGCCAATGGTGACTTCTACACCGGCCAGTGGGTCGACAACTACGCGCACGGCCAAGGGAAGTACCTGTGGACCGATGGGTGTATGTACCTTGGCGAATGGCAGAAGGGTAGGACGTCGGGTAGAGGAAAATTTAGTTGGCCTTCTGGTGCCACTTATGAAGGGGAATTCAAGAACGGATATATGGATGGCAAAGGAACTTACATGGGTTCTTGTGGAGATACCTATAGAGGATCGTGGGTTATGAATTTGAAATATGGTCAGGGGGCTAAGAGCTTTGTCAATGGGGATTATTACGAGGGTGAATGGCGCCGCGGGTTGCAGGACGGGCAGGGGCGGTATCAATGGAAAAATGGGAGCCATTATATCGGCCAATGGAAGCATGGAATGATTCATGGGAATGGGATCATGATTTGGAGCAATGGGAATCGGTATGACGGGTCTTGGGAAGAAGGTTTGCCTAAAGGAAATGGCACGTTTCGGTGGGCTGATGGGAGCTTCTATGTGGGAGTTTGGAGTAAGGATTCGAAAGAGCAGAATGGGACTTACTACCCAGCAGGGTCCTCGGGTGGTAATGTGGATTGGGATCCTCAGGAGGTGTTTGCAGTGGACTTGAATGATTGCAAGGTGTGCCCGCAGGAAACTATTCCGATATACCCTTCACAGAAGACGATGAGTTGGCCTGGATTTGAAGGGGAGTTCTTGAACAAGCAGCCTATTTATAAAAACGGGAACGAAGGGAATGTGAGGCCTAGGAGAACTTCCGATGCGAGGGTGAGTAATTATAGTAGGTCATCTAATGGAGATTGCATGTTTGATGGAGTTGATAGGAGCTCAAGAGAGGGAAGTGCAGGATTTGAGTTGGAAGGTTCGGTTGCGAAAGGGATTAGACATCAGCATTTCAAAGTTCAGCCAATGAAGAAACAAGGGGTGACAATAGCTAAAGGGCATAAGAACTATGAGCTTATGCTTAATCTGCAGTTGGGAATCAGGCATTCTGTTGGAAGGCCTGCTCCAACTACATCTCTTGACCTGAAGAGTTCAGCATTCGATCCCAAGGAGAAAGTATGGACAAAATTTCCCCCAGAAGGATCCAAGTATACTCCACCCCACCAGTCATGCGACTTCAAATGGAAGGATTACTGTCCTGTGGTTTTCCGGACTCTCAGGAAATTGTTCAAGGTAGATCCAGCAGATTACATGATATCAATATGTGGAAATGACGCTCTTCGAGAGCTCTCATCCCCTGGAAAGAGTGGAAGCTTCTTTTATTTGACAAATGATGACCGGTACATGATAAAGACAATGAAGAAGGCAGAAGTAAAAGTGCTTCTAAGAATGCTTCGAGCTTACTATAATCATGTTAGATCCTTTGAGAATACTCTGGTCACCAAATTTTACGGCCTTCATTGTGTAAAGTTAACGGGAACTGCCCAAAAGAAGGTGAGATTTGTCATTATGGGGAATCTATTTTGCTCCGAGTTTGCAATTCACAGGCGGTTTGATTTAAAAGGCTCTTCCCATGGCCGCACAACTGATAAACCTGAGTCGGAAATTGATGCTACAACAACTCTTAAAGATCTCGATCTTAATTATATATTTAGGTTGCAGAAGGTTTGGTTTCAAGAGTTCTGCAGGCAAGTGGACAGAGATTGCGACTTTCTTGAACAGGAAAGAATAATGGACTACAGTCTCTTGATTGGTCTTCACTTCCGAGAAGCTTCATGCACAGAAAAACCCAAAACTCCAGACCGAACCTCTGGAGCTCGTACTCCAACTGGAAATAGCGACCCTGACAATGGTACCCCACGCCTTTCTAAAGTTGACATGGAACGGCTTCTTTCTGACCCGAACAGGTGGTCTTCTATTAGGTTAGGTATTAATATGCCAGCATGGGCTGAAAGGACAGTGAGAAGAAATGATTGTGAGGCTCAGTTGGTTGGAGACCCAACCGGAGAGTTGTACGATGTCATTCTGTTTTTTGGTATAATTGACATACTACAGGACTATGATATCAGCAAAAAGCTCGAGCATGCATACAAATCATTCCAATATGACCCGACCTCAATCTCTGCTGTTGATCCGAAGCAATACTCAAGACGCTTTCGTGCTTTCATCTTCAGAGTTTTTGTAGAAGACACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016192 GO:0016301 GO:0016307 GO:0016308 GO:0016310 GO:0016324 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0030258 GO:0042995 GO:0044237 GO:0044238 GO:0044255 GO:0044425 GO:0044459 GO:0044464 GO:0045177 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0051179 GO:0051234 GO:0071704 GO:0071944 GO:0072583 GO:0090406 GO:0098590 GO:0098657 GO:0120025

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

MORN PIP5K

Protein Analysis

767

Amino Acids

87.6

Weight (kDa)

8.89

Isoelectric Point (pI)

33.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	59 - 81	2e-06	MORN repeat
MORN	PF02493	151 - 172	1.7e-06	MORN repeat
MORN	PF02493	174 - 196	1.7e-07	MORN repeat
PIP5K	PF01504	456 - 759	8.3e-103	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004590)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07960 AT3G07960 AT3G07960 AT3G07960
fragaria_vesca	FvH4_7g03200
malus_domestica	MD02G1285400.v1.1 MD07G1050500.v1.1
prunus_persica	Prupe.2G037500_v2.0.a1 Prupe.2G037500_v2.0.a1
pyrus_communis	pycom02g24280 pycom07g03650
rosa_chinensis	RchiOBHm_Chr1g0325051 RchiOBHm_Chr4g0399911 RchiOBHm_Chr4g0430501 RchiOBHm_Chr5g0045071
rosa_laevigata	RLG00000014230 RLG00000030160 RLG00000035174
rosa_multiflora	Rmu_sc0005212.1_g000001
rosa_roxburghii	Rroxscaffold_4G00324920 Rroxscaffold_5G00338600
rosa_rugosa	Rorug01G0049400 Rorug01G0049500
rosa_samantha	Rh1AG065600 Rh1BG053900 Rh1CG066800 Rh3BG243900 Rh4AG093600 Rh5BG309800 Rh7CG313900
rosa_wichuraiana	Rw0G014780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	879
AasI	GACNNNNNNGTC	1 cut(s)	152
AatII	GACGTC	1 cut(s)	275
Acc16I	TGCGCA	1 cut(s)	50
Acc65I	GGTACC	1 cut(s)	1958
AccB1I	GGYRCC	3 cut(s)	305, 465, 1958
AccI	GTMKAC	2 cut(s)	192, 1256
AccII	CGCG	2 cut(s)	203, 471
AccIII	TCCGGA	1 cut(s)	1314
AciI	CCGC	6 cut(s)	469, 471, 493, 791, 1654, 1684
AcoI	YGGCCR	4 cut(s)	181, 208, 526, 1681
AcsI	RAATTY	5 cut(s)	287, 323, 403, 1232, 1550
AcuI	CTGAAG	2 cut(s)	1211, 2260
AcyI	GRCGYC	2 cut(s)	272, 466
AfaI	GTAC	6 cut(s)	221, 245, 1448, 1927, 1960, 2120
AfiI	CCNNNNNNNGG	5 cut(s)	186, 927, 1244, 1597, 1955
AgeI	ACCGGT	1 cut(s)	1443
AjnI	CCWGG	4 cut(s)	32, 127, 838, 1402
AjuI	GAANNNNNNNTTGG	6 cut(s)	74, 106, 155, 187, 277, 309
AleI	CACNNNNGTG	1 cut(s)	63
Alw21I	GWGCWC	3 cut(s)	992, 1395, 1924
Alw26I	GTCTC	2 cut(s)	1853, 2094
Ama87I	CYCGRG	2 cut(s)	721, 2183
Aor13HI	TCCGGA	1 cut(s)	1314
ApeKI	GCWGC	1 cut(s)	868
ApoI	RAATTY	5 cut(s)	287, 323, 403, 1232, 1550
ArsI	GACNNNNNNTTYG	2 cut(s)	2000, 2032
AseI	ATTAAT	1 cut(s)	2037
AsiGI	ACCGGT	1 cut(s)	1443
Asp700I	GAANNNNTTC	3 cut(s)	801, 1331, 1992
Asp718I	GGTACC	1 cut(s)	1958
AspA2I	CCTAGG	1 cut(s)	908
AspLEI	GCGC	3 cut(s)	51, 205, 468
AspS9I	GGNCC	4 cut(s)	78, 154, 228, 717
AsuHPI	GGTGA	7 cut(s)	143, 179, 470, 943, 1099, 1537, 1612
AsuII	TTCGAA	1 cut(s)	683
AvaI	CYCGRG	2 cut(s)	721, 2183
AvaII	GGWCC	3 cut(s)	154, 228, 717
AvrII	CCTAGG	1 cut(s)	908
AxyI	CCTNAGG	1 cut(s)	747
BaeGI	GKGCMC	1 cut(s)	791
BaeI	ACNNNNGTAYC	2 cut(s)	1942, 1975
BamHI	GGATCC	2 cut(s)	742, 1247
BanI	GGYRCC	3 cut(s)	305, 465, 1958
BanII	GRGCYC	3 cut(s)	992, 1395, 1924
BarI	GAAGNNNNNNTAC	2 cut(s)	1470, 1502
BbsI	GAAGAC	3 cut(s)	830, 1853, 2010
Bbv12I	GWGCWC	3 cut(s)	992, 1395, 1924
BbvI	GCAGC	1 cut(s)	880
BccI	CCATC	4 cut(s)	227, 338, 641, 968
BceAI	ACGGC	3 cut(s)	223, 1573, 2006
BcgI	CGANNNNNNTGC	4 cut(s)	702, 736, 2164, 2198
BciT130I	CCWGG	4 cut(s)	34, 129, 840, 1404
BcoDI	GTCTC	2 cut(s)	1853, 2094
BfaI	CTAG	1 cut(s)	909
BfmI	CTRYAG	6 cut(s)	114, 382, 1133, 1789, 1843, 2156
BfoI	RGCGCY	1 cut(s)	469
BglII	AGATCT	1 cut(s)	1735
BisI	GCNGC	3 cut(s)	469, 869, 1684
BlnI	CCTAGG	1 cut(s)	908
BlsI	GCNGC	3 cut(s)	470, 870, 1685
Bme1390I	CCNGG	4 cut(s)	34, 129, 840, 1404
Bme18I	GGWCC	3 cut(s)	154, 228, 717
BmeT110I	CYCGRG	2 cut(s)	721, 2183
BmgT120I	GGNCC	4 cut(s)	78, 154, 228, 717
BmiI	GGNNCC	7 cut(s)	307, 467, 515, 718, 744, 1249, 1960
BmrFI	CCNGG	4 cut(s)	34, 129, 840, 1404
BmsI	GCATC	2 cut(s)	913, 1705
BoxI	GACNNNNGTC	1 cut(s)	1845
BpiI	GAAGAC	3 cut(s)	830, 1853, 2010
BpmI	CTGGAG	2 cut(s)	1887, 1938
Bpu14I	TTCGAA	1 cut(s)	683
BpuEI	CTTGAG	2 cut(s)	976, 2236
BsaBI	GATNNNNATC	2 cut(s)	741, 1740
BsaHI	GRCGYC	2 cut(s)	272, 466
BsaI	GGTCTC	1 cut(s)	2094
BsaJI	CCNNGG	9 cut(s)	33, 211, 247, 469, 720, 908, 1212, 1402, 1678
BsaWI	WCCGGW	3 cut(s)	1314, 1443, 2108
Bsc4I	CCNNNNNNNGG	5 cut(s)	186, 927, 1244, 1597, 1955
Bse118I	RCCGGY	2 cut(s)	179, 1443
Bse1I	ACTGG	4 cut(s)	67, 184, 1270, 1939
Bse21I	CCTNAGG	1 cut(s)	747
Bse3DI	GCAATG	1 cut(s)	583
Bse8I	GATNNNNATC	2 cut(s)	741, 1740
BseAI	TCCGGA	1 cut(s)	1314
BseBI	CCWGG	4 cut(s)	34, 129, 840, 1404
BseDI	CCNNGG	9 cut(s)	33, 211, 247, 469, 720, 908, 1212, 1402, 1678
BseGI	GGATG	2 cut(s)	349, 1397
BseJI	GATNNNNATC	2 cut(s)	741, 1740
BseLI	CCNNNNNNNGG	5 cut(s)	186, 927, 1244, 1597, 1955
BseMI	GCAATG	1 cut(s)	583
BseMII	CTCAG	4 cut(s)	761, 1336, 1692, 2102
BseNI	ACTGG	4 cut(s)	67, 184, 1270, 1939
BseSI	GKGCMC	1 cut(s)	791
BseXI	GCAGC	1 cut(s)	880
BseYI	CCCAGC	1 cut(s)	709
BsgI	GTGCAG	1 cut(s)	1026
Bsh1236I	CGCG	2 cut(s)	203, 471
BshNI	GGYRCC	3 cut(s)	305, 465, 1958
BshTI	ACCGGT	1 cut(s)	1443
BsiHKAI	GWGCWC	3 cut(s)	992, 1395, 1924
BsiHKCI	CYCGRG	2 cut(s)	721, 2183
BsiSI	CCGG	4 cut(s)	180, 1315, 1444, 2109
BslFI	GGGAC	1 cut(s)	712
BslI	CCNNNNNNNGG	5 cut(s)	186, 927, 1244, 1597, 1955
BsmAI	GTCTC	2 cut(s)	1853, 2094
BsmFI	GGGAC	1 cut(s)	712
BsmI	GAATGC	3 cut(s)	1150, 1202, 1500
Bso31I	GGTCTC	1 cut(s)	2094
BsoBI	CYCGRG	2 cut(s)	721, 2183
Bsp119I	TTCGAA	1 cut(s)	683
Bsp1286I	GDGCHC	4 cut(s)	791, 992, 1395, 1924
Bsp13I	TCCGGA	1 cut(s)	1314
Bsp19I	CCATGG	1 cut(s)	1678
BspACI	CCGC	6 cut(s)	469, 471, 493, 791, 1654, 1684
BspCNI	CTCAG	4 cut(s)	760, 1335, 1693, 2101
BspEI	TCCGGA	1 cut(s)	1314
BspFNI	CGCG	2 cut(s)	203, 471
BspHI	TCATGA	2 cut(s)	121, 564
BspLI	GGNNCC	7 cut(s)	307, 467, 515, 718, 744, 1249, 1960
BspMAI	CTGCAG	3 cut(s)	118, 1137, 1793
BspQI	GCTCTTC	2 cut(s)	1389, 1678
BspT104I	TTCGAA	1 cut(s)	683
BspT107I	GGYRCC	3 cut(s)	305, 465, 1958
BspTNI	GGTCTC	1 cut(s)	2094
BsrDI	GCAATG	1 cut(s)	583
BsrFI	RCCGGY	2 cut(s)	179, 1443
BsrI	ACTGG	4 cut(s)	67, 184, 1270, 1939
BssAI	RCCGGY	2 cut(s)	179, 1443
BssECI	CCNNGG	9 cut(s)	33, 211, 247, 469, 720, 908, 1212, 1402, 1678
BssNAI	GTATAC	1 cut(s)	1257
BssNI	GRCGYC	2 cut(s)	272, 466
BssT1I	CCWWGG	5 cut(s)	211, 247, 908, 1212, 1678
Bst1107I	GTATAC	1 cut(s)	1257
Bst2UI	CCWGG	4 cut(s)	34, 129, 840, 1404
Bst4CI	ACNGT	3 cut(s)	1301, 1847, 2065
Bst6I	CTCTTC	3 cut(s)	1187, 1389, 1678
BstACI	GRCGYC	2 cut(s)	272, 466
BstAPI	GCANNNNNTGC	1 cut(s)	786
BstBI	TTCGAA	1 cut(s)	683
BstC8I	GCNNGC	5 cut(s)	791, 1167, 1793, 2046, 2190
BstDEI	CTNAG	6 cut(s)	426, 747, 1322, 1490, 1701, 2088
BstDSI	CCRYGG	2 cut(s)	469, 1678
BstEII	GGTNACC	1 cut(s)	1543
BstF5I	GGATG	2 cut(s)	349, 1397
BstFNI	CGCG	2 cut(s)	203, 471
BstH2I	RGCGCY	1 cut(s)	469
BstHHI	GCGC	3 cut(s)	51, 205, 468
BstMAI	GTCTC	2 cut(s)	1853, 2094
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 484, 786, 1132
BstNI	CCWGG	4 cut(s)	34, 129, 840, 1404
BstNSI	RCATGY	2 cut(s)	970, 2192
BstPAI	GACNNNNGTC	1 cut(s)	1845
BstPI	GGTNACC	1 cut(s)	1543
BstSCI	CCNGG	4 cut(s)	32, 127, 838, 1402
BstSFI	CTRYAG	6 cut(s)	114, 382, 1133, 1789, 1843, 2156
BstSLI	GKGCMC	1 cut(s)	791
BstUI	CGCG	2 cut(s)	203, 471
BstV1I	GCAGC	1 cut(s)	880
BstV2I	GAAGAC	3 cut(s)	830, 1853, 2010
BstX2I	RGATCY	5 cut(s)	742, 1247, 1342, 1523, 1735
BstYI	RGATCY	5 cut(s)	742, 1247, 1342, 1523, 1735
BstZ17I	GTATAC	1 cut(s)	1257
Bsu36I	CCTNAGG	1 cut(s)	747
BtgI	CCRYGG	2 cut(s)	469, 1678
BtsCI	GGATG	2 cut(s)	349, 1397
BtsI	GCAGTG	1 cut(s)	768
BtsIMutI	CAGTG	4 cut(s)	60, 191, 768, 2070
Cac8I	GCNNGC	5 cut(s)	791, 1167, 1793, 2046, 2190
CciI	TCATGA	2 cut(s)	121, 564
CfoI	GCGC	3 cut(s)	51, 205, 468
Cfr10I	RCCGGY	2 cut(s)	179, 1443
Cfr13I	GGNCC	4 cut(s)	78, 154, 228, 717
Cfr42I	CCGCGG	1 cut(s)	472
CseI	GACGC	2 cut(s)	1388, 2265
Csp6I	GTAC	6 cut(s)	220, 244, 1447, 1926, 1959, 2119
CspAI	ACCGGT	1 cut(s)	1443
CviQI	GTAC	6 cut(s)	220, 244, 1447, 1926, 1959, 2119
DdeI	CTNAG	6 cut(s)	426, 747, 1322, 1490, 1701, 2088
DinI	GGCGCC	1 cut(s)	467
DraI	TTTAAA	2 cut(s)	27, 1665
DrdI	GACNNNNNNGTC	1 cut(s)	152
DseDI	GACNNNNNNGTC	1 cut(s)	152
EaeI	YGGCCR	4 cut(s)	181, 208, 526, 1681
Eam1104I	CTCTTC	3 cut(s)	1187, 1389, 1678
EarI	CTCTTC	3 cut(s)	1187, 1389, 1678
Ecl136II	GAGCTC	3 cut(s)	990, 1393, 1922
Eco130I	CCWWGG	5 cut(s)	211, 247, 908, 1212, 1678
Eco147I	AGGCCT	3 cut(s)	32, 907, 1165
Eco24I	GRGCYC	3 cut(s)	992, 1395, 1924
Eco31I	GGTCTC	1 cut(s)	2094
Eco32I	GATATC	2 cut(s)	1362, 2170
Eco47I	GGWCC	3 cut(s)	154, 228, 717
Eco53kI	GAGCTC	3 cut(s)	990, 1393, 1922
Eco57I	CTGAAG	2 cut(s)	1211, 2260
Eco81I	CCTNAGG	1 cut(s)	747
Eco88I	CYCGRG	2 cut(s)	721, 2183
Eco91I	GGTNACC	1 cut(s)	1543
EcoICRI	GAGCTC	3 cut(s)	990, 1393, 1922
EcoO109I	RGGNCCY	2 cut(s)	154, 717
EcoO65I	GGTNACC	1 cut(s)	1543
EcoRI	GAATTC	1 cut(s)	323
EcoRII	CCWGG	4 cut(s)	32, 127, 838, 1402
EcoRV	GATATC	2 cut(s)	1362, 2170
EcoT14I	CCWWGG	5 cut(s)	211, 247, 908, 1212, 1678
EcoT22I	ATGCAT	1 cut(s)	2194
EcoT38I	GRGCYC	3 cut(s)	992, 1395, 1924
EgeI	GGCGCC	1 cut(s)	467
EheI	GGCGCC	1 cut(s)	467
ErhI	CCWWGG	5 cut(s)	211, 247, 908, 1212, 1678
FaqI	GGGAC	1 cut(s)	712
FauI	CCCGC	2 cut(s)	464, 798
FblI	GTMKAC	2 cut(s)	192, 1256
Fnu4HI	GCNGC	3 cut(s)	469, 869, 1684
FokI	GGATG	2 cut(s)	356, 1384
FriOI	GRGCYC	3 cut(s)	992, 1395, 1924
Fsp4HI	GCNGC	3 cut(s)	469, 869, 1684
FspBI	CTAG	1 cut(s)	909
FspI	TGCGCA	1 cut(s)	50
GlaI	GCGC	3 cut(s)	50, 204, 467
GluI	GCNGC	3 cut(s)	469, 869, 1684
GsaI	CCCAGC	1 cut(s)	713
GsuI	CTGGAG	2 cut(s)	1887, 1938
HaeII	RGCGCY	1 cut(s)	469
HapII	CCGG	4 cut(s)	180, 1315, 1444, 2109
HgaI	GACGC	2 cut(s)	1388, 2265
HhaI	GCGC	3 cut(s)	51, 205, 468
Hin1I	GRCGYC	2 cut(s)	272, 466
Hin6I	GCGC	3 cut(s)	49, 203, 466
HinP1I	GCGC	3 cut(s)	49, 203, 466
HincII	GTYRAC	3 cut(s)	193, 1578, 1981
HindII	GTYRAC	3 cut(s)	193, 1578, 1981
HindIII	AAGCTT	2 cut(s)	1417, 1875
HinfI	GANTC	8 cut(s)	18, 547, 583, 680, 1143, 1318, 1621, 1703
HpaI	GTTAAC	1 cut(s)	1578
HpaII	CCGG	4 cut(s)	180, 1315, 1444, 2109
HphI	GGTGA	7 cut(s)	143, 179, 470, 943, 1099, 1537, 1612
Hpy166II	GTNNAC	7 cut(s)	193, 228, 766, 1257, 1578, 1801, 1981
Hpy188I	TCNGA	9 cut(s)	17, 807, 922, 1636, 1708, 1871, 2002, 2241, 2279
Hpy8I	GTNNAC	7 cut(s)	193, 228, 766, 1257, 1578, 1801, 1981
Hpy99I	CGWCG	1 cut(s)	277
HpyCH4III	ACNGT	3 cut(s)	1301, 1847, 2065
HpyCH4IV	ACGT	2 cut(s)	272, 632
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 484, 786, 1132
HpyF3I	CTNAG	6 cut(s)	426, 747, 1322, 1490, 1701, 2088
HpySE526I	ACGT	2 cut(s)	272, 632
Hsp92I	GRCGYC	2 cut(s)	272, 466
HspAI	GCGC	3 cut(s)	49, 203, 466
KasI	GGCGCC	1 cut(s)	465
Kpn2I	TCCGGA	1 cut(s)	1314
KpnI	GGTACC	1 cut(s)	1962
KspAI	GTTAAC	1 cut(s)	1578
KspI	CCGCGG	1 cut(s)	472
LguI	GCTCTTC	2 cut(s)	1389, 1678
LmnI	GCTCC	7 cut(s)	513, 573, 651, 987, 1174, 1637, 1919
Lsp1109I	GCAGC	1 cut(s)	880
LweI	GCATC	2 cut(s)	913, 1705
MaeI	CTAG	1 cut(s)	909
MaeII	ACGT	2 cut(s)	272, 632
MaeIII	GTNAC	3 cut(s)	167, 1087, 1543
MflI	RGATCY	5 cut(s)	742, 1247, 1342, 1523, 1735
MhlI	GDGCHC	4 cut(s)	791, 992, 1395, 1924
Mly113I	GGCGCC	1 cut(s)	466
MlyI	GAGTC	2 cut(s)	1312, 1712
MmeI	TCCRAC	6 cut(s)	999, 1138, 1196, 1686, 1955, 2077
Mph1103I	ATGCAT	1 cut(s)	2194
MroI	TCCGGA	1 cut(s)	1314
MroXI	GAANNNNTTC	3 cut(s)	801, 1331, 1992
MseI	TTAA	7 cut(s)	26, 1128, 1577, 1664, 1731, 1746, 2037
MslI	CAYNNNNRTG	3 cut(s)	63, 98, 555
MspA1I	CMGCKG	1 cut(s)	471
MspI	CCGG	4 cut(s)	180, 1315, 1444, 2109
MspR9I	CCNGG	4 cut(s)	34, 129, 840, 1404
Mva1269I	GAATGC	3 cut(s)	1150, 1202, 1500
MvaI	CCWGG	4 cut(s)	34, 129, 840, 1404
MvnI	CGCG	2 cut(s)	203, 471
MwoI	GCNNNNNNNGC	4 cut(s)	38, 484, 786, 1132
NarI	GGCGCC	1 cut(s)	466
NcoI	CCATGG	1 cut(s)	1678
NlaIV	GGNNCC	7 cut(s)	307, 467, 515, 718, 744, 1249, 1960
NmuCI	GTSAC	3 cut(s)	167, 1087, 1543
NsbI	TGCGCA	1 cut(s)	50
NsiI	ATGCAT	1 cut(s)	2194
NspI	RCATGY	2 cut(s)	970, 2192
NspV	TTCGAA	1 cut(s)	683
OliI	CACNNNNGTG	1 cut(s)	63
PaeI	GCATGC	1 cut(s)	2192
PaeR7I	CTCGAG	1 cut(s)	2183
PagI	TCATGA	2 cut(s)	121, 564
PceI	AGGCCT	3 cut(s)	32, 907, 1165
PciSI	GCTCTTC	2 cut(s)	1389, 1678
PctI	GAATGC	3 cut(s)	1150, 1202, 1500
PdmI	GAANNNNTTC	3 cut(s)	801, 1331, 1992
PfeI	GAWTC	6 cut(s)	18, 547, 583, 680, 1143, 1621
PinAI	ACCGGT	1 cut(s)	1443
PkrI	GCNGC	3 cut(s)	470, 870, 1685
PleI	GAGTC	2 cut(s)	1312, 1711
PluTI	GGCGCC	1 cut(s)	469
PpsI	GAGTC	2 cut(s)	1312, 1711
PpuMI	RGGWCCY	2 cut(s)	154, 717
PshAI	GACNNNNGTC	1 cut(s)	1845
PshBI	ATTAAT	1 cut(s)	2037
PsiI	TTATAA	1 cut(s)	879
Psp124BI	GAGCTC	3 cut(s)	992, 1395, 1924
Psp5II	RGGWCCY	2 cut(s)	154, 717
Psp6I	CCWGG	4 cut(s)	32, 127, 838, 1402
PspEI	GGTNACC	1 cut(s)	1543
PspFI	CCCAGC	1 cut(s)	709
PspGI	CCWGG	4 cut(s)	32, 127, 838, 1402
PspN4I	GGNNCC	7 cut(s)	307, 467, 515, 718, 744, 1249, 1960
PspPI	GGNCC	4 cut(s)	78, 154, 228, 717
PspPPI	RGGWCCY	2 cut(s)	154, 717
PspXI	VCTCGAGB	1 cut(s)	2183
PstI	CTGCAG	3 cut(s)	118, 1137, 1793
PsuI	RGATCY	5 cut(s)	742, 1247, 1342, 1523, 1735
RsaI	GTAC	6 cut(s)	221, 245, 1448, 1927, 1960, 2120
RsaNI	GTAC	6 cut(s)	220, 244, 1447, 1926, 1959, 2119
RseI	CAYNNNNRTG	3 cut(s)	63, 98, 555
SacI	GAGCTC	3 cut(s)	992, 1395, 1924
SacII	CCGCGG	1 cut(s)	472
SalI	GTCGAC	1 cut(s)	191
SapI	GCTCTTC	2 cut(s)	1389, 1678
SaqAI	TTAA	7 cut(s)	26, 1128, 1577, 1664, 1731, 1746, 2037
SatI	GCNGC	3 cut(s)	469, 869, 1684
Sau96I	GGNCC	4 cut(s)	78, 154, 228, 717
SchI	GAGTC	2 cut(s)	1312, 1712
ScrFI	CCNGG	4 cut(s)	34, 129, 840, 1404
SduI	GDGCHC	4 cut(s)	791, 992, 1395, 1924
SfaNI	GCATC	2 cut(s)	913, 1705
SfcI	CTRYAG	6 cut(s)	114, 382, 1133, 1789, 1843, 2156
SfoI	GGCGCC	1 cut(s)	467
Sfr274I	CTCGAG	1 cut(s)	2183
Sfr303I	CCGCGG	1 cut(s)	472
SfuI	TTCGAA	1 cut(s)	683
SgrBI	CCGCGG	1 cut(s)	472
SinI	GGWCC	3 cut(s)	154, 228, 717
SlaI	CTCGAG	1 cut(s)	2183
SmiMI	CAYNNNNRTG	3 cut(s)	63, 98, 555
SmlI	CTYRAG	3 cut(s)	991, 2183, 2251
SmoI	CTYRAG	3 cut(s)	991, 2183, 2251
SphI	GCATGC	1 cut(s)	2192
SseBI	AGGCCT	3 cut(s)	32, 907, 1165
SsiI	CCGC	6 cut(s)	469, 471, 493, 791, 1654, 1684
SspDI	GGCGCC	1 cut(s)	465
SspMI	CTAG	1 cut(s)	909
SstI	GAGCTC	3 cut(s)	992, 1395, 1924
StuI	AGGCCT	3 cut(s)	32, 907, 1165
StyD4I	CCNGG	4 cut(s)	32, 127, 838, 1402
StyI	CCWWGG	5 cut(s)	211, 247, 908, 1212, 1678
TaaI	ACNGT	3 cut(s)	1301, 1847, 2065
TaiI	ACGT	2 cut(s)	275, 635
TaqI	TCGA	7 cut(s)	192, 683, 1206, 1387, 1501, 1740, 2184
TaqII	GACCGA	2 cut(s)	245, 1923
TauI	GCSGC	2 cut(s)	471, 1686
TfiI	GAWTC	6 cut(s)	18, 547, 583, 680, 1143, 1621
Tru1I	TTAA	7 cut(s)	26, 1128, 1577, 1664, 1731, 1746, 2037
Tru9I	TTAA	7 cut(s)	26, 1128, 1577, 1664, 1731, 1746, 2037
TscAI	CASTG	4 cut(s)	67, 191, 768, 2070
TseFI	GTSAC	3 cut(s)	167, 1087, 1543
TseI	GCWGC	1 cut(s)	868
Tsp45I	GTSAC	3 cut(s)	167, 1087, 1543
TspDTI	ATGAA	9 cut(s)	10, 330, 416, 539, 1088, 1478, 1553, 1869, 2260
TspGWI	ACGGA	2 cut(s)	94, 348
TspRI	CASTG	4 cut(s)	67, 191, 768, 2070
VpaK11BI	GGWCC	3 cut(s)	154, 228, 717
VspI	ATTAAT	1 cut(s)	2037
XapI	RAATTY	5 cut(s)	287, 323, 403, 1232, 1550
XceI	RCATGY	2 cut(s)	970, 2192
XcmI	CCANNNNNNNNNTGG	1 cut(s)	536
XhoI	CTCGAG	1 cut(s)	2183
XmaJI	CCTAGG	1 cut(s)	908
XmiI	GTMKAC	2 cut(s)	192, 1256
XmnI	GAANNNNTTC	3 cut(s)	801, 1331, 1992
XspI	CTAG	1 cut(s)	909
ZraI	GACGTC	1 cut(s)	273
Zsp2I	ATGCAT	1 cut(s)	2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.