Rw0G014780

phosphatidylinositol 4-phosphate 5-kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00658
Physical Location & Seq
Reverse (-)
6291 .. 11922
5632 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G014780.1

Sequence Viewer

Length: 1794 bp
ATGAGCAAAGAGTTGAGATTCATTGTGAAGGCCTGGGAAGCAACAGTGCGTAAAACACATATTGGAGGAAAGAAGAGGGCCAACCCTTTATTCACAACAATGTCTGTAGTCCCTGCAGATGATGAGCCCGGTGAAACCTATCATACCGAGAAGGTCCTCGCCCATGGTGACTTCTACACAGGCCAATGGGCTAACAGCTATGCTCATGGGCAAGGCAAGTACCTGTGGGCAGATGGGTGCATGTATGTTGGAGAATGGCAGAAAGGTAAGACAGCAGGGAAGGGAAAGTTCAGCTGGCCTTCTGGTGCCACTTATGAAGGAGACTTCAAAAGTGGGTTTATGGATGGTAAAGGGACTTATACAGGTTCTTTTGGAGAAACATATCGAGGTTCATGGGTGATGAATCTGAGATATGGGCAGGGGACTAAGAGCTTTGTCAATGGGGATCATTATGAGGGTGAATGGCGCCGAGGATTGCAGGACGGCCAGGGGAGGTACCAGTGGAAGAATGGGAACCATTATATTGGTCAATGGAGGAATGGGATGATTCATGGGAGTGGGACTATGATTTGGAGCAATGGGAATAGGTATGATGGGTCTTGGGAAGAAGGGTTGCCTAAAGGGAATGGTACATTTAGGTGGGCTGATGGGAGTTTCTATGTGGGTGTTTGGAGTAAGGAGAGTAAAGATCAGATGGGGACTTATTATCCAGCTGGTTCTTCTGGTGGTCATGTGGATTGGGATCCTCAGGAGGTGTTTGCAGTGGACTTGAATGATTGTAAGGTGTGTCCAGTGGAGACTATTTCGATTTTCCCTTCACAGAAGATGCTGAATTGGCCTGGAATGGAAGGGGAGTTTATGAACAAGCCACCTATTTATAAGAATGGAAGCGAAGGGAATGTGAGGCCTAGGAGATCATCTGATGCGAGGTCGAGTAATTTTAGCAGAGGATCCAATTGTGATAGCACTTTGGATGGAAATGTTGGGCTCGAAGGTTCGTTTGCTAGCAACAGGTTTGGAGTTCAGCCAATGAAGAAACAAGGGGTCACAATATCGAAAGGACATAAGAATTATGAGCTTATGCTTAATCTGCAGTTGGGGATCAGGCATTCTGTTGGAAGGCCAGCTCCAACTACATCCCTTGATCTGAAGACTTCAGCATTTGATCCCAGGGAAAAAGTTTGGACGAAATTTCCCCCAGAAGGATCCAAGTATACTCCACCTCACCAGTCGAGTGACTTCAAATGGAAGGATTATTGCCCTGTGGTTTTCAGGACTCTAAGGAAACTGTTTAAGGTAGATCCAGCAGATTACATGATATCACTATGTGGAAATGATGCCCTTCGAGAACTCTCATCTCCTGGAAAGAGTGGAAGCTTCTTTTACTTGACCAATGATGACCGTTACATGATAAAGACCATGAAGAAAGCAGAAGTAAAAGTTCTGCTGAGAATGCTTCCAGCTTATTATAATCATGTTCGAGCCTTTGAGAATACTCTGGTCACAAAGTTTTTTGGTCTTCATTGTGTAAAATTAACAGGGCCTACCCAAAAGAAGGTGCGGTTTGTCATAATGGGGAATCTATTTTGCTCCGAATACGGCATTCATAGAAGGTTTGATTTGAAAGGCTCTTCCCTTGGCCGTACAACCAACAAACCCGCGCAGAAATTGATGCAACAACAACTCTTAAAGATCTTGATCTTAATTATATATTTAGGTTACAGAAGGTTTGGTTTCAAGAGTTCTGCAGGCAAGTGGACAGAGATTGCGACTTCCTTGAACAGGAAAGAATAA

Protein Analysis

597

Amino Acids

67.5

Weight (kDa)

9.53

Isoelectric Point (pI)

31.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MORN PF02493 59 - 81 4.3e-06 MORN repeat
MORN PF02493 151 - 172 1.7e-06 MORN repeat
MORN PF02493 174 - 196 1.5e-08 MORN repeat
PIP5K PF01504 442 - 561 1.6e-50 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 879, 1470
Acc65I GGTACC 1 cut(s) 495
AccB1I GGYRCC 3 cut(s) 305, 465, 495
AccI GTMKAC 1 cut(s) 1214
AccII CGCG 1 cut(s) 1661
AciI CCGC 2 cut(s) 1561, 1659
AcoI YGGCCR 2 cut(s) 484, 1639
AcsI RAATTY 1 cut(s) 1190
AcuI CTGAAG 2 cut(s) 1140, 1169
AcyI GRCGYC 1 cut(s) 466
AdeI CACNNNGTG 1 cut(s) 1328
AfaI GTAC 4 cut(s) 221, 497, 631, 1645
AfiI CCNNNNNNNGG 3 cut(s) 1202, 1555, 1782
AgsI TTSAA 6 cut(s) 328, 772, 1243, 1624, 1738, 1780
AjnI CCWGG 5 cut(s) 32, 486, 838, 1169, 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 74, 106
AluBI AGCT 8 cut(s) 198, 294, 432, 713, 1078, 1127, 1377, 1463
AluI AGCT 8 cut(s) 198, 294, 432, 713, 1078, 1127, 1377, 1463
Alw26I GTCTC 2 cut(s) 315, 791
ApoI RAATTY 1 cut(s) 1190
Asp718I GGTACC 1 cut(s) 495
AspA2I CCTAGG 1 cut(s) 908
AspLEI GCGC 2 cut(s) 468, 1663
AspS9I GGNCC 3 cut(s) 78, 154, 1541
AsuC2I CCSGG 1 cut(s) 129
AsuHPI GGTGA 5 cut(s) 143, 179, 409, 470, 1217
AsuNHI GCTAGC 1 cut(s) 1004
AvaII GGWCC 1 cut(s) 154
AvrII CCTAGG 1 cut(s) 908
AxyI CCTNAGG 1 cut(s) 747
BamHI GGATCC 3 cut(s) 742, 950, 1205
BanI GGYRCC 3 cut(s) 305, 465, 495
BanII GRGCYC 2 cut(s) 129, 990
BbsI GAAGAC 2 cut(s) 1157, 1511
BccI CCATC 6 cut(s) 227, 338, 587, 641, 688, 968
BceAI ACGGC 3 cut(s) 499, 1615, 1626
BciT130I CCWGG 5 cut(s) 34, 488, 840, 1171, 1362
BcnI CCSGG 1 cut(s) 129
BcoDI GTCTC 2 cut(s) 315, 791
BfaI CTAG 2 cut(s) 909, 1005
BfmI CTRYAG 4 cut(s) 105, 114, 1091, 1746
BfoI RGCGCY 1 cut(s) 469
BglII AGATCT 1 cut(s) 1692
BlnI CCTAGG 1 cut(s) 908
Bme1390I CCNGG 6 cut(s) 34, 129, 488, 840, 1171, 1362
Bme18I GGWCC 1 cut(s) 154
BmgT120I GGNCC 3 cut(s) 78, 154, 1541
BmiI GGNNCC 7 cut(s) 307, 467, 497, 515, 744, 952, 1207
BmrFI CCNGG 6 cut(s) 34, 129, 488, 840, 1171, 1362
BmsI GCATC 4 cut(s) 816, 913, 1327, 1662
BmtI GCTAGC 1 cut(s) 1008
BpiI GAAGAC 2 cut(s) 1157, 1511
BpuMI CCSGG 1 cut(s) 129
BsaBI GATNNNNATC 2 cut(s) 741, 1697
BsaHI GRCGYC 1 cut(s) 466
BsaJI CCNNGG 8 cut(s) 33, 163, 469, 487, 908, 1169, 1170, 1636
Bsc4I CCNNNNNNNGG 3 cut(s) 1202, 1555, 1782
Bse1I ACTGG 3 cut(s) 499, 791, 1228
Bse21I CCTNAGG 1 cut(s) 747
Bse3DI GCAATG 1 cut(s) 583
Bse8I GATNNNNATC 2 cut(s) 741, 1697
BseBI CCWGG 5 cut(s) 34, 488, 840, 1171, 1362
BseDI CCNNGG 8 cut(s) 33, 163, 469, 487, 908, 1169, 1170, 1636
BseGI GGATG 4 cut(s) 349, 549, 979, 1136
BseJI GATNNNNATC 2 cut(s) 741, 1697
BseLI CCNNNNNNNGG 3 cut(s) 1202, 1555, 1782
BseMI GCAATG 1 cut(s) 583
BseMII CTCAG 3 cut(s) 398, 761, 1439
BseNI ACTGG 3 cut(s) 499, 791, 1228
Bsh1236I CGCG 1 cut(s) 1661
BshNI GGYRCC 3 cut(s) 305, 465, 495
BsiSI CCGG 1 cut(s) 129
BslFI GGGAC 5 cut(s) 95, 367, 436, 574, 712
BslI CCNNNNNNNGG 3 cut(s) 1202, 1555, 1782
BsmAI GTCTC 2 cut(s) 315, 791
BsmFI GGGAC 5 cut(s) 95, 367, 436, 574, 712
BsmI GAATGC 3 cut(s) 1108, 1458, 1602
Bsp1286I GDGCHC 2 cut(s) 129, 990
Bsp19I CCATGG 1 cut(s) 163
BspACI CCGC 2 cut(s) 1561, 1659
BspCNI CTCAG 3 cut(s) 399, 760, 1440
BspFNI CGCG 1 cut(s) 1661
BspLI GGNNCC 7 cut(s) 307, 467, 497, 515, 744, 952, 1207
BspMAI CTGCAG 3 cut(s) 118, 1095, 1750
BspOI GCTAGC 1 cut(s) 1008
BspQI GCTCTTC 1 cut(s) 1636
BspT107I GGYRCC 3 cut(s) 305, 465, 495
BsrDI GCAATG 1 cut(s) 583
BsrI ACTGG 3 cut(s) 499, 791, 1228
BssECI CCNNGG 8 cut(s) 33, 163, 469, 487, 908, 1169, 1170, 1636
BssNAI GTATAC 1 cut(s) 1215
BssNI GRCGYC 1 cut(s) 466
BssT1I CCWWGG 3 cut(s) 163, 908, 1636
Bst1107I GTATAC 1 cut(s) 1215
Bst2UI CCWGG 5 cut(s) 34, 488, 840, 1171, 1362
Bst4CI ACNGT 3 cut(s) 46, 1290, 1403
Bst6I CTCTTC 2 cut(s) 68, 1636
BstACI GRCGYC 1 cut(s) 466
BstC8I GCNNGC 4 cut(s) 296, 1006, 1125, 1750
BstDEI CTNAG 5 cut(s) 407, 426, 747, 1280, 1448
BstDSI CCRYGG 1 cut(s) 163
BstENI CCTNNNNNAGG 1 cut(s) 1780
BstF5I GGATG 4 cut(s) 349, 549, 979, 1136
BstFNI CGCG 1 cut(s) 1661
BstH2I RGCGCY 1 cut(s) 469
BstHHI GCGC 2 cut(s) 468, 1663
BstMAI GTCTC 2 cut(s) 315, 791
BstMWI GCNNNNNNNGC 4 cut(s) 38, 835, 1090, 1453
BstNI CCWGG 5 cut(s) 34, 488, 840, 1171, 1362
BstNSI RCATGY 1 cut(s) 244
BstSCI CCNGG 6 cut(s) 32, 127, 486, 838, 1169, 1360
BstSFI CTRYAG 4 cut(s) 105, 114, 1091, 1746
BstUI CGCG 1 cut(s) 1661
BstV2I GAAGAC 2 cut(s) 1157, 1511
BstX2I RGATCY 5 cut(s) 742, 950, 1205, 1300, 1692
BstXI CCANNNNNNTGG 1 cut(s) 524
BstYI RGATCY 5 cut(s) 742, 950, 1205, 1300, 1692
BstZ17I GTATAC 1 cut(s) 1215
Bsu36I CCTNAGG 1 cut(s) 747
BtgI CCRYGG 1 cut(s) 163
BtsCI GGATG 4 cut(s) 349, 549, 979, 1136
BtsI GCAGTG 1 cut(s) 768
BtsIMutI CAGTG 4 cut(s) 51, 506, 768, 798
Cac8I GCNNGC 4 cut(s) 296, 1006, 1125, 1750
CfoI GCGC 2 cut(s) 468, 1663
Cfr13I GGNCC 3 cut(s) 78, 154, 1541
Csp6I GTAC 4 cut(s) 220, 496, 630, 1644
CviQI GTAC 4 cut(s) 220, 496, 630, 1644
DdeI CTNAG 5 cut(s) 407, 426, 747, 1280, 1448
DinI GGCGCC 1 cut(s) 467
DraIII CACNNNGTG 1 cut(s) 1328
EaeI YGGCCR 2 cut(s) 484, 1639
Eam1104I CTCTTC 2 cut(s) 68, 1636
EarI CTCTTC 2 cut(s) 68, 1636
Eco130I CCWWGG 3 cut(s) 163, 908, 1636
Eco147I AGGCCT 2 cut(s) 32, 907
Eco24I GRGCYC 2 cut(s) 129, 990
Eco32I GATATC 1 cut(s) 1320
Eco47I GGWCC 1 cut(s) 154
Eco57I CTGAAG 2 cut(s) 1140, 1169
Eco81I CCTNAGG 1 cut(s) 747
EcoNI CCTNNNNNAGG 1 cut(s) 1780
EcoO109I RGGNCCY 2 cut(s) 154, 1541
EcoRII CCWGG 5 cut(s) 32, 486, 838, 1169, 1360
EcoRV GATATC 1 cut(s) 1320
EcoT14I CCWWGG 3 cut(s) 163, 908, 1636
EcoT38I GRGCYC 2 cut(s) 129, 990
EgeI GGCGCC 1 cut(s) 467
EheI GGCGCC 1 cut(s) 467
ErhI CCWWGG 3 cut(s) 163, 908, 1636
FaqI GGGAC 5 cut(s) 95, 367, 436, 574, 712
FauI CCCGC 1 cut(s) 1666
FblI GTMKAC 1 cut(s) 1214
FokI GGATG 4 cut(s) 356, 556, 986, 1123
FriOI GRGCYC 2 cut(s) 129, 990
FspBI CTAG 2 cut(s) 909, 1005
GlaI GCGC 2 cut(s) 467, 1662
HaeII RGCGCY 1 cut(s) 469
HapII CCGG 1 cut(s) 129
HhaI GCGC 2 cut(s) 468, 1663
Hin1I GRCGYC 1 cut(s) 466
Hin6I GCGC 2 cut(s) 466, 1661
HinP1I GCGC 2 cut(s) 466, 1661
HindIII AAGCTT 1 cut(s) 1375
HinfI GANTC 5 cut(s) 18, 403, 547, 1276, 1579
HpaII CCGG 1 cut(s) 129
HphI GGTGA 5 cut(s) 143, 179, 409, 470, 1217
Hpy166II GTNNAC 3 cut(s) 766, 1215, 1758
Hpy188I TCNGA 5 cut(s) 408, 693, 922, 1149, 1594
Hpy188III TCNNGA 5 cut(s) 749, 1273, 1346, 1696, 1738
Hpy8I GTNNAC 3 cut(s) 766, 1215, 1758
HpyCH4III ACNGT 3 cut(s) 46, 1290, 1403
HpyCH4V TGCA 7 cut(s) 116, 240, 478, 761, 1093, 1675, 1748
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 835, 1090, 1453
HpyF3I CTNAG 5 cut(s) 407, 426, 747, 1280, 1448
Hsp92I GRCGYC 1 cut(s) 466
HspAI GCGC 2 cut(s) 466, 1661
KasI GGCGCC 1 cut(s) 465
KpnI GGTACC 1 cut(s) 499
LguI GCTCTTC 1 cut(s) 1636
LmnI GCTCC 3 cut(s) 573, 1132, 1595
LweI GCATC 4 cut(s) 816, 913, 1327, 1662
MaeI CTAG 2 cut(s) 909, 1005
MaeIII GTNAC 6 cut(s) 167, 1045, 1235, 1403, 1501, 1718
MfeI CAATTG 1 cut(s) 955
MflI RGATCY 5 cut(s) 742, 950, 1205, 1300, 1692
MhlI GDGCHC 2 cut(s) 129, 990
MluCI AATT 8 cut(s) 832, 937, 955, 1069, 1190, 1532, 1667, 1704
Mly113I GGCGCC 1 cut(s) 466
MlyI GAGTC 1 cut(s) 1270
MmeI TCCRAC 3 cut(s) 229, 1096, 1154
MseI TTAA 5 cut(s) 1086, 1293, 1535, 1688, 1703
MslI CAYNNNNRTG 3 cut(s) 98, 555, 637
MspA1I CMGCKG 2 cut(s) 294, 713
MspI CCGG 1 cut(s) 129
MspR9I CCNGG 6 cut(s) 34, 129, 488, 840, 1171, 1362
MunI CAATTG 1 cut(s) 955
Mva1269I GAATGC 3 cut(s) 1108, 1458, 1602
MvaI CCWGG 5 cut(s) 34, 488, 840, 1171, 1362
MvnI CGCG 1 cut(s) 1661
MwoI GCNNNNNNNGC 4 cut(s) 38, 835, 1090, 1453
NarI GGCGCC 1 cut(s) 466
NciI CCSGG 1 cut(s) 129
NcoI CCATGG 1 cut(s) 163
NheI GCTAGC 1 cut(s) 1004
NlaIV GGNNCC 7 cut(s) 307, 467, 497, 515, 744, 952, 1207
NmeAIII GCCGAG 1 cut(s) 494
NmuCI GTSAC 4 cut(s) 167, 1045, 1235, 1501
NspI RCATGY 1 cut(s) 244
PasI CCCWGGG 1 cut(s) 1170
PceI AGGCCT 2 cut(s) 32, 907
PciSI GCTCTTC 1 cut(s) 1636
PctI GAATGC 3 cut(s) 1108, 1458, 1602
PfeI GAWTC 4 cut(s) 18, 403, 547, 1579
PfoI TCCNGGA 1 cut(s) 1360
PleI GAGTC 1 cut(s) 1270
PluTI GGCGCC 1 cut(s) 469
PpsI GAGTC 1 cut(s) 1270
PpuMI RGGWCCY 1 cut(s) 154
PsiI TTATAA 2 cut(s) 879, 1470
Psp5II RGGWCCY 1 cut(s) 154
Psp6I CCWGG 5 cut(s) 32, 486, 838, 1169, 1360
PspGI CCWGG 5 cut(s) 32, 486, 838, 1169, 1360
PspN4I GGNNCC 7 cut(s) 307, 467, 497, 515, 744, 952, 1207
PspPI GGNCC 3 cut(s) 78, 154, 1541
PspPPI RGGWCCY 1 cut(s) 154
PstI CTGCAG 3 cut(s) 118, 1095, 1750
PsuI RGATCY 5 cut(s) 742, 950, 1205, 1300, 1692
PvuII CAGCTG 2 cut(s) 294, 713
RsaI GTAC 4 cut(s) 221, 497, 631, 1645
RsaNI GTAC 4 cut(s) 220, 496, 630, 1644
RseI CAYNNNNRTG 3 cut(s) 98, 555, 637
SapI GCTCTTC 1 cut(s) 1636
SaqAI TTAA 5 cut(s) 1086, 1293, 1535, 1688, 1703
Sau96I GGNCC 3 cut(s) 78, 154, 1541
SchI GAGTC 1 cut(s) 1270
ScrFI CCNGG 6 cut(s) 34, 129, 488, 840, 1171, 1362
SduI GDGCHC 2 cut(s) 129, 990
SfaNI GCATC 4 cut(s) 816, 913, 1327, 1662
SfcI CTRYAG 4 cut(s) 105, 114, 1091, 1746
SfoI GGCGCC 1 cut(s) 467
SinI GGWCC 1 cut(s) 154
SmiMI CAYNNNNRTG 3 cut(s) 98, 555, 637
Sse9I AATT 8 cut(s) 832, 937, 955, 1069, 1190, 1532, 1667, 1704
SseBI AGGCCT 2 cut(s) 32, 907
SsiI CCGC 2 cut(s) 1561, 1659
SspDI GGCGCC 1 cut(s) 465
SspMI CTAG 2 cut(s) 909, 1005
StuI AGGCCT 2 cut(s) 32, 907
StyD4I CCNGG 6 cut(s) 32, 127, 486, 838, 1169, 1360
StyI CCWWGG 3 cut(s) 163, 908, 1636
TaaI ACNGT 3 cut(s) 46, 1290, 1403
TaqI TCGA 8 cut(s) 385, 806, 932, 990, 1055, 1232, 1345, 1480
TasI AATT 8 cut(s) 832, 937, 955, 1069, 1190, 1532, 1667, 1704
TfiI GAWTC 4 cut(s) 18, 403, 547, 1579
Tru1I TTAA 5 cut(s) 1086, 1293, 1535, 1688, 1703
Tru9I TTAA 5 cut(s) 1086, 1293, 1535, 1688, 1703
TscAI CASTG 4 cut(s) 51, 506, 768, 798
TseFI GTSAC 4 cut(s) 167, 1045, 1235, 1501
Tsp45I GTSAC 4 cut(s) 167, 1045, 1235, 1501
TspRI CASTG 4 cut(s) 51, 506, 768, 798
VpaK11BI GGWCC 1 cut(s) 154
XagI CCTNNNNNAGG 1 cut(s) 1780
XapI RAATTY 1 cut(s) 1190
XceI RCATGY 1 cut(s) 244
XcmI CCANNNNNNNNNTGG 1 cut(s) 506
XmaJI CCTAGG 1 cut(s) 908
XmiI GTMKAC 1 cut(s) 1214
XspI CTAG 2 cut(s) 909, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.