Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0002635

Physical Location & Seq

Genomic Coordinates Reverse (-)

5024691 .. 5029107

Gene Structure 4417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1062500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3057 bp

ATGGTGGGTGCTGCTGAACTGACTCCGATAAACAGAAAAAAACTCCCTTGCTTTGGAGTTCGCCAAAACCCCTTTGAGCAGAGAGTGAGAAAGACAGAGTCTTTAGAGAGAGAAAGAGGAGAGAGAGAGAGCATAAAGAATACAGCCCATGAAAGAAAAGAGAAAACCCAGAAGCAGAAGCCATTTTCTTCCATTTATTTTCTCGGGAAACAAACACCACATTGGCCTATAGCCTGCTTCGCCACCTCTCTATCTCCGGAGATTTACTGCCATTTAGATATGCGAGGTCTGAAGATTTTAGACCGATTCACAAGCACACAAGTCCACGCTGTAAATCCCACCGAACCCTCCAAAGGCAAAACCCATGGCGGCGTTTCGAGAGCTAAGTTTAATTCCCGTCTGATTAAGTCATTTGGGTCGAACTCAAAGCCCAAAACTTTGAGCTCGGGCTCTGGGGCTGAAGCTCTTCTGCTTCCCTGTGGAGTCCCAGCAACTGACCTCCTTGAGCCCTCCATAGACCCCCACCTTAAGCCCTCTGATTTCGTCGAAAACTTGGCCGACTTGTATCGCCGGTTGGAGGGATGTTCCTCTCAATCTGAAAGGTCATTGTTGTGCGTTGAGCAGTACTCTCTGTTGAGTGGTCATGGTGATCCCAAGCTGCTTCGACGGTGTCTGAGAGCTGCTCGACAGAATGCTGCTGATGTGAACGATAAGGTTGTGCTCTCGGCGTGGTTGAGGTTCGAGAGGAGGGAGGATGAGCTTGTGGGGATGGCGGCTATGGATTGTGGCGGGCAAGTTATGGAGTGTCCTAAGGTTGCTTTGGTGAATGGGGTTGATCCGGATTTGGTTTCGGGTCATTGCCAATGTGGGAAAGACGCTGCTAAAGCTGTTAGTGTGCCTGCTTTTAAGGGCAGTGAGTGTGTGGGTTTAGATGAGGAGGGAAGTGATGTTTCATTTTGTATAGGAGATGAAGAAATTAATTGTAGAAGGTGTAAAATTGCGTCGCTTTCTAGCCCTTTTGAAGCTATGTTGTATGGATCCTTTAAAGAATCGAAAAAGGGTAGGATTGATTTTTCAGAAAATGGGATATCTGTGAAGGGAATGAGAGCTGTGGAAGTGTATAGTAGGACTAGGAGGTTATACTTGTTTAGTCGTGAGATTGTTGTGGAGTTGCTTTCGTTTGCGAATAGGTTCTGTTGTGAGGAGATGAAGTCTTCTTGTGATGCTTATTTAGCTTCATCCGTCGACAACATTGATGATGCATTGATTCTTATTGAATACGGTTTGGAGGAGATGGCATATCTTCTTGTAGCTGCCTGCTTGCAGGTGCTGCTGAGAGAGCTCCCAAGTTCTCTGCATAATTCAAAGGCGATGAAATTTCTTTGTAGCTCCAAGGTTAGGGAGAGATTGGCCATGGCAGGGTATGGTTTCTTATTGTATTATTTCTTAAGCCATGTGGCAATGGAGGAAAGTATGGTGTCAAACACAACTGTAATGTTATTGGAGAGGTTGGAAGAATGCGCAACGCAGAGGTGGCAGAAGACGCTTGTGTTGCATCAATTGGGTTGTGTTTTGCTTGAGAGAAGAGAGTATAAGGAGGCTCAGTTTCACTTTCTGGCTGCGGCTAAGGCAGGTCATGTCTATTCAGTGGCTGGTGTTGCAAGGACGAAGTACAAACAGGGGCAACAATATTCAGCGTATACGTTGATGAGCTCTATTATCAATGAGTATAAACCAGCCGGGTGGATGTACCAGGAACGCGCCCTCTACAATATCGGTAAGGAAAAGATTTTGGATTTGAGCACTGCAACTGAATTAGATCCCACTCTTTCATTTCCATATAAATATAGAGCCGTTGCAAATTTGGAGGAGAAGCAAATTAGAGCAGCCATTTTGGAGATTGACAAAGCTGTTAGGTTTAAATTGTCGCCCGACTGTATTGAATTGCGGGCTTGGTTCTTCATTGCACTTGAAGATTATGAAAGTGCTCTCAGAGACATTCGCGTTTTATTAACTTTGGAACCCAATTACATGATGTTTCATGGAAAGGTTAGTGGGGATTACTTGGTGGGGCTTCTCAGCCTTCGGGTTAAGCAGTTGAGTGAAGCTGAGTGCTGGATGCAACTATATGATCAATGGTCGTCTGTTGATGACATTGGATCTCTGGCTATCATACATCAGATGTTGGGACATACCCCTCGAAAGAGCCTCCTGCAGTTTCGGCAATCTTTACTCCTTTTACGGTTAAATTGTCAGAAGGCTGCAATGCGCAGTTTGCGGTTGGCAAGAAATAATTCTGGCTCTGAGCATGAGAGGCTGGTCTACGAAGGGTGGATTTTATATGACACCGGAAATCGTGAAGAAGCTCTTGCAAAGGCGGAAAAGTCCGTTCACATTCAGAGATCATTTGAAGCTTTTTTCCTTAAAGCGTATGTACTGGCAGATGCTAGCTTGGACTCTGAAGCATCGTCTCATGTTATTCAACTGCTGGAGGAAGCTCTCAAGTGTCCTTCAGATGGTCTTCGTAAAGGACAAGCACTAAATAACTTGGGGAGTATATATGTAGATTGTGGTAAGCTGGACAAGGCTGCGGACTGCTATGTGAGTGCTCTTGACATCAAGCATACAAGAGCTCATCAAGGGTTGGCTCGTGTTTATCATCTTAAGAATCAACGAAAAGCTGCATATGATGAGATGACCAAACTCATAGAGAAGGCACAAAGTAATGCATCAGCATACGAGAAACGCTCAGAGTACGGTGATCCCGAGATGACTAAGAATGATCTCAATATGGCATCACAATTGGACCCATTGAGGACATACCCGTACAGATACAGGGCAGCAGTGCTGATGGATGAACAAAGAGAGACTGAAGCTATAGAAAAGCTTACAAGGGCCATATCTTTCAAGCCTGACTTGCAAATGCTTCATCTTCGAGCTGCATTTCACGAGTCAATTGGTGATTTAAGTTCTGCTCTCCAAGATTGTCAAGCTGCTCTCTGCATGGACCCCAACCACACAGACACTATCGATTTGTATAATCGAGCAAGGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_1 TPR_8

Protein Analysis

1019

Amino Acids

114.79

Weight (kDa)

7.46

Isoelectric Point (pI)

40.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51770 AT3G51770
fragaria_vesca	FvH4_3g39300 FvH4_3g39300 FvH4_3g39300 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980
malus_domestica	MD03G1062500.v1.1 MD04G1162900.v1.1 MD11G1066100.v1.1 MD12G1176500.v1.1
prunus_persica	Prupe.6G052500_v2.0.a1 Prupe.6G052500_v2.0.a1 Prupe.6G282400_v2.0.a1
pyrus_communis	pycom03g05010 pycom11g05600 pycom12g16650
rosa_chinensis	RchiOBHm_Chr3g0462291 RchiOBHm_Chr5g0070731
rosa_laevigata	RLG00000024871 RLG00000036154
rosa_multiflora	Rmu_co8338553.1_g000001 Rmu_sc0002944.1_g000041 Rmu_sc0036080.1_g000002
rosa_roxburghii	Rroxscaffold_1G00010460 Rroxscaffold_6G00417610
rosa_rugosa	Rorug03G0055500 Rorug05G0408100 Rorug05G0408200
rosa_samantha	Rh3AG114300 Rh3BG117400 Rh3CG120200 Rh3DG119200 Rh5AG463600 Rh5CG505800 Rh5DG494000
rosa_wichuraiana	Rw3G009650 Rw5G043150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1315
Acc16I	TGCGCA	2 cut(s)	1522, 2270
Acc36I	ACCTGC	2 cut(s)	1315, 1622
AccI	GTMKAC	3 cut(s)	1245, 1700, 2322
AccII	CGCG	2 cut(s)	1761, 2004
AccIII	TCCGGA	2 cut(s)	256, 838
AciI	CCGC	8 cut(s)	369, 773, 789, 1622, 1948, 2278, 2378, 2591
AclWI	GGATC	7 cut(s)	644, 830, 1032, 1045, 1814, 2167, 2756
AcoI	YGGCCR	2 cut(s)	555, 1410
AcsI	RAATTY	2 cut(s)	1376, 1861
AcuI	CTGAAG	5 cut(s)	311, 480, 2481, 2496, 2892
AfaI	GTAC	6 cut(s)	626, 1673, 1751, 2436, 2756, 2828
AfiI	CCNNNNNNNGG	6 cut(s)	53, 353, 577, 1398, 1419, 2516
AflII	CTTAAG	3 cut(s)	527, 1447, 2663
AgsI	TTSAA	8 cut(s)	1022, 1277, 1365, 1943, 1973, 2411, 2483, 2908
AjnI	CCWGG	1 cut(s)	1752
Alw21I	GWGCWC	8 cut(s)	446, 723, 1344, 1715, 1805, 1990, 2611, 2635
Alw26I	GTCTC	3 cut(s)	1989, 2475, 2861
AlwI	GGATC	7 cut(s)	644, 830, 1032, 1045, 1814, 2167, 2756
AlwNI	CAGNNNCTG	3 cut(s)	494, 1330, 1652
Ama87I	CYCGRG	3 cut(s)	203, 445, 2765
Aor13HI	TCCGGA	2 cut(s)	256, 838
AoxI	GGCC	4 cut(s)	224, 555, 1410, 2895
ApoI	RAATTY	2 cut(s)	1376, 1861
AseI	ATTAAT	1 cut(s)	978
Asp700I	GAANNNNTTC	3 cut(s)	465, 1190, 2293
AspLEI	GCGC	3 cut(s)	1523, 1763, 2271
AspS9I	GGNCC	3 cut(s)	2806, 2895, 3007
AsuC2I	CCSGG	1 cut(s)	1741
AsuHPI	GGTGA	4 cut(s)	659, 835, 2771, 2972
AsuNHI	GCTAGC	1 cut(s)	2447
AvaI	CYCGRG	3 cut(s)	203, 445, 2765
AvaII	GGWCC	2 cut(s)	2806, 3007
AxyI	CCTNAGG	1 cut(s)	810
BalI	TGGCCA	1 cut(s)	1412
BamHI	GGATCC	1 cut(s)	1037
BanII	GRGCYC	6 cut(s)	446, 452, 510, 1344, 1715, 2635
BauI	CACGAG	2 cut(s)	2649, 2948
BbsI	GAAGAC	3 cut(s)	1206, 1547, 2513
Bbv12I	GWGCWC	8 cut(s)	446, 723, 1344, 1715, 1805, 1990, 2611, 2635
BccI	CCATC	4 cut(s)	763, 1288, 2510, 2845
BceAI	ACGGC	1 cut(s)	1838
BciT130I	CCWGG	1 cut(s)	1754
BclI	TGATCA	1 cut(s)	2131
BcnI	CCSGG	1 cut(s)	1741
BcoDI	GTCTC	3 cut(s)	1989, 2475, 2861
BfaI	CTAG	3 cut(s)	1011, 1131, 2448
BfmI	CTRYAG	3 cut(s)	228, 2213, 2877
BfrI	CTTAAG	3 cut(s)	527, 1447, 2663
BfuAI	ACCTGC	2 cut(s)	1315, 1622
BmcAI	AGTACT	1 cut(s)	626
Bme1390I	CCNGG	2 cut(s)	1741, 1754
Bme18I	GGWCC	2 cut(s)	2806, 3007
BmeT110I	CYCGRG	3 cut(s)	203, 445, 2765
BmgT120I	GGNCC	3 cut(s)	2806, 2895, 3007
BmiI	GGNNCC	4 cut(s)	1039, 2022, 2808, 3009
BmrFI	CCNGG	2 cut(s)	1741, 1754
BmsI	GCATC	8 cut(s)	1213, 1249, 1564, 2109, 2434, 2474, 2738, 2804
BmtI	GCTAGC	1 cut(s)	2451
BpiI	GAAGAC	3 cut(s)	1206, 1547, 2513
BplI	GAGNNNNNCTC	6 cut(s)	611, 643, 667, 699, 2732, 2764
BpmI	CTGGAG	1 cut(s)	2510
Bpu10I	CCTNAGC	1 cut(s)	1626
BpuEI	CTTGAG	3 cut(s)	524, 1598, 2486
BpuMI	CCSGG	1 cut(s)	1741
Bsa29I	ATCGAT	1 cut(s)	3030
BsaJI	CCNNGG	3 cut(s)	364, 1392, 1413
BsaWI	WCCGGW	3 cut(s)	256, 838, 2348
BsaXI	ACNNNNNCTCC	4 cut(s)	1196, 1226, 1589, 1619
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 353, 577, 1398, 1419, 2516
Bse118I	RCCGGY	1 cut(s)	570
Bse1I	ACTGG	1 cut(s)	2442
Bse21I	CCTNAGG	1 cut(s)	810
Bse3DI	GCAATG	4 cut(s)	856, 1467, 1962, 2271
BseAI	TCCGGA	2 cut(s)	256, 838
BseBI	CCWGG	1 cut(s)	1754
BseCI	ATCGAT	1 cut(s)	3030
BseDI	CCNNGG	3 cut(s)	364, 1392, 1413
BseGI	GGATG	7 cut(s)	587, 760, 774, 1238, 1752, 2124, 2860
BseLI	CCNNNNNNNGG	6 cut(s)	53, 353, 577, 1398, 1419, 2516
BseMI	GCAATG	4 cut(s)	856, 1467, 1962, 2271
BseMII	CTCAG	8 cut(s)	665, 1325, 1616, 2005, 2092, 2100, 2295, 2763
BseNI	ACTGG	1 cut(s)	2442
BseRI	GAGGAG	6 cut(s)	132, 760, 950, 1217, 1304, 1883
BseYI	CCCAGC	1 cut(s)	487
Bsh1236I	CGCG	2 cut(s)	1761, 2004
BshFI	GGCC	4 cut(s)	226, 557, 1412, 2897
BshVI	ATCGAT	1 cut(s)	3030
BsiHKAI	GWGCWC	8 cut(s)	446, 723, 1344, 1715, 1805, 1990, 2611, 2635
BsiHKCI	CYCGRG	3 cut(s)	203, 445, 2765
BsiSI	CCGG	5 cut(s)	257, 571, 839, 1740, 2349
BslFI	GGGAC	2 cut(s)	470, 2202
BslI	CCNNNNNNNGG	6 cut(s)	53, 353, 577, 1398, 1419, 2516
BsmAI	GTCTC	3 cut(s)	1989, 2475, 2861
BsmBI	CGTCTC	1 cut(s)	2475
BsmFI	GGGAC	2 cut(s)	470, 2202
BsmI	GAATGC	2 cut(s)	697, 1523
BsnI	GGCC	4 cut(s)	226, 557, 1412, 2897
BsoBI	CYCGRG	3 cut(s)	203, 445, 2765
Bsp13I	TCCGGA	2 cut(s)	256, 838
Bsp143I	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
Bsp19I	CCATGG	2 cut(s)	364, 1413
BspACI	CCGC	8 cut(s)	369, 773, 789, 1622, 1948, 2278, 2378, 2591
BspANI	GGCC	4 cut(s)	226, 557, 1412, 2897
BspCNI	CTCAG	8 cut(s)	666, 1326, 1615, 2004, 2091, 2101, 2296, 2762
BspDI	ATCGAT	1 cut(s)	3030
BspEI	TCCGGA	2 cut(s)	256, 838
BspFNI	CGCG	2 cut(s)	1761, 2004
BspLI	GGNNCC	4 cut(s)	1039, 2022, 2808, 3009
BspMAI	CTGCAG	1 cut(s)	2217
BspMI	ACCTGC	2 cut(s)	1315, 1622
BspOI	GCTAGC	1 cut(s)	2451
BspPI	GGATC	7 cut(s)	644, 830, 1032, 1045, 1814, 2167, 2756
BspQI	GCTCTTC	1 cut(s)	471
BspTI	CTTAAG	3 cut(s)	527, 1447, 2663
BsrDI	GCAATG	4 cut(s)	856, 1467, 1962, 2271
BsrFI	RCCGGY	1 cut(s)	570
BsrI	ACTGG	1 cut(s)	2442
BssAI	RCCGGY	1 cut(s)	570
BssECI	CCNNGG	3 cut(s)	364, 1392, 1413
BssMI	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
BssNAI	GTATAC	1 cut(s)	1701
BssSI	CACGAG	2 cut(s)	2649, 2948
BssT1I	CCWWGG	3 cut(s)	364, 1392, 1413
Bst1107I	GTATAC	1 cut(s)	1701
Bst2BI	CACGAG	2 cut(s)	2649, 2948
Bst2UI	CCWGG	1 cut(s)	1754
Bst4CI	ACNGT	6 cut(s)	669, 1283, 1492, 1937, 2244, 2759
Bst6I	CTCTTC	2 cut(s)	471, 1579
BstAFI	CTTAAG	3 cut(s)	527, 1447, 2663
BstAPI	GCANNNNNTGC	1 cut(s)	1330
BstC8I	GCNNGC	7 cut(s)	235, 791, 900, 1318, 1322, 1950, 2449
BstDSI	CCRYGG	2 cut(s)	364, 1413
BstF5I	GGATG	7 cut(s)	587, 760, 774, 1238, 1752, 2124, 2860
BstFNI	CGCG	2 cut(s)	1761, 2004
BstHHI	GCGC	3 cut(s)	1523, 1763, 2271
BstKTI	GATC	9 cut(s)	652, 838, 1040, 1822, 2134, 2162, 2405, 2764, 2785
BstMAI	GTCTC	3 cut(s)	1989, 2475, 2861
BstMBI	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
BstNI	CCWGG	1 cut(s)	1754
BstSCI	CCNGG	2 cut(s)	1739, 1752
BstSFI	CTRYAG	3 cut(s)	228, 2213, 2877
BstUI	CGCG	2 cut(s)	1761, 2004
BstV2I	GAAGAC	3 cut(s)	1206, 1547, 2513
BstX2I	RGATCY	3 cut(s)	1037, 1819, 2159
BstXI	CCANNNNNNTGG	1 cut(s)	1743
BstYI	RGATCY	3 cut(s)	1037, 1819, 2159
BstZ17I	GTATAC	1 cut(s)	1701
Bsu15I	ATCGAT	1 cut(s)	3030
Bsu36I	CCTNAGG	1 cut(s)	810
BsuRI	GGCC	4 cut(s)	226, 557, 1412, 2897
BsuTUI	ATCGAT	1 cut(s)	3030
BtgI	CCRYGG	2 cut(s)	364, 1413
BtgZI	GCGATG	1 cut(s)	1385
BtsCI	GGATG	7 cut(s)	587, 760, 774, 1238, 1752, 2124, 2860
BtsI	GCAGTG	3 cut(s)	919, 1803, 2850
BtsIMutI	CAGTG	4 cut(s)	919, 1653, 1803, 2850
BveI	ACCTGC	2 cut(s)	1315, 1622
Cac8I	GCNNGC	7 cut(s)	235, 791, 900, 1318, 1322, 1950, 2449
CaiI	CAGNNNCTG	3 cut(s)	494, 1330, 1652
CfoI	GCGC	3 cut(s)	1523, 1763, 2271
Cfr10I	RCCGGY	1 cut(s)	570
Cfr13I	GGNCC	3 cut(s)	2806, 2895, 3007
ClaI	ATCGAT	1 cut(s)	3030
CseI	GACGC	3 cut(s)	884, 990, 1552
Csp6I	GTAC	6 cut(s)	625, 1672, 1750, 2435, 2755, 2827
CviQI	GTAC	6 cut(s)	625, 1672, 1750, 2435, 2755, 2827
DpnI	GATC	9 cut(s)	651, 837, 1039, 1821, 2133, 2161, 2404, 2763, 2784
DpnII	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
DraI	TTTAAA	2 cut(s)	1045, 1921
EaeI	YGGCCR	2 cut(s)	555, 1410
Eam1104I	CTCTTC	2 cut(s)	471, 1579
EarI	CTCTTC	2 cut(s)	471, 1579
EciI	GGCGGA	1 cut(s)	2393
Ecl136II	GAGCTC	4 cut(s)	444, 1342, 1713, 2633
Eco130I	CCWWGG	3 cut(s)	364, 1392, 1413
Eco24I	GRGCYC	6 cut(s)	446, 452, 510, 1344, 1715, 2635
Eco32I	GATATC	1 cut(s)	1089
Eco47I	GGWCC	2 cut(s)	2806, 3007
Eco53kI	GAGCTC	4 cut(s)	444, 1342, 1713, 2633
Eco57I	CTGAAG	5 cut(s)	311, 480, 2481, 2496, 2892
Eco81I	CCTNAGG	1 cut(s)	810
Eco88I	CYCGRG	3 cut(s)	203, 445, 2765
EcoICRI	GAGCTC	4 cut(s)	444, 1342, 1713, 2633
EcoRII	CCWGG	1 cut(s)	1752
EcoRV	GATATC	1 cut(s)	1089
EcoT14I	CCWWGG	3 cut(s)	364, 1392, 1413
EcoT22I	ATGCAT	2 cut(s)	1264, 2731
EcoT38I	GRGCYC	6 cut(s)	446, 452, 510, 1344, 1715, 2635
ErhI	CCWWGG	3 cut(s)	364, 1392, 1413
Esp3I	CGTCTC	1 cut(s)	2475
FalI	AAGNNNNNCTT	4 cut(s)	2352, 2384, 2900, 2932
FaqI	GGGAC	2 cut(s)	470, 2202
FauI	CCCGC	2 cut(s)	782, 1941
FauNDI	CATATG	1 cut(s)	2686
FbaI	TGATCA	1 cut(s)	2131
FblI	GTMKAC	3 cut(s)	1245, 1700, 2322
FokI	GGATG	7 cut(s)	594, 767, 781, 1225, 1759, 2131, 2867
FriOI	GRGCYC	6 cut(s)	446, 452, 510, 1344, 1715, 2635
FspBI	CTAG	3 cut(s)	1011, 1131, 2448
FspI	TGCGCA	2 cut(s)	1522, 2270
GlaI	GCGC	3 cut(s)	1522, 1762, 2270
GsaI	CCCAGC	1 cut(s)	491
GsuI	CTGGAG	1 cut(s)	2510
HaeIII	GGCC	4 cut(s)	226, 557, 1412, 2897
HapII	CCGG	5 cut(s)	257, 571, 839, 1740, 2349
HgaI	GACGC	3 cut(s)	884, 990, 1552
HhaI	GCGC	3 cut(s)	1523, 1763, 2271
Hin6I	GCGC	3 cut(s)	1521, 1761, 2269
HinP1I	GCGC	3 cut(s)	1521, 1761, 2269
HincII	GTYRAC	1 cut(s)	1246
HindII	GTYRAC	1 cut(s)	1246
HindIII	AAGCTT	2 cut(s)	2412, 2885
HinfI	GANTC	9 cut(s)	22, 98, 306, 483, 1049, 1267, 2456, 2668, 2951
HpaII	CCGG	5 cut(s)	257, 571, 839, 1740, 2349
HphI	GGTGA	4 cut(s)	659, 835, 2771, 2972
Hpy166II	GTNNAC	6 cut(s)	325, 706, 1246, 1701, 2323, 2392
Hpy8I	GTNNAC	6 cut(s)	325, 706, 1246, 1701, 2323, 2392
Hpy99I	CGWCG	4 cut(s)	548, 669, 1006, 1247
HpyAV	CCTTC	7 cut(s)	981, 1090, 2093, 2251, 2321, 2520, 2707
HpyCH4III	ACNGT	6 cut(s)	669, 1283, 1492, 1937, 2244, 2759
HpyCH4IV	ACGT	1 cut(s)	1703
HpySE526I	ACGT	1 cut(s)	1703
HspAI	GCGC	3 cut(s)	1521, 1761, 2269
Kpn2I	TCCGGA	2 cut(s)	256, 838
Ksp22I	TGATCA	1 cut(s)	2131
Kzo9I	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
LguI	GCTCTTC	1 cut(s)	471
LmnI	GCTCC	2 cut(s)	1347, 1394
LweI	GCATC	8 cut(s)	1213, 1249, 1564, 2109, 2434, 2474, 2738, 2804
MaeI	CTAG	3 cut(s)	1011, 1131, 2448
MaeII	ACGT	1 cut(s)	1703
MalI	GATC	9 cut(s)	651, 837, 1039, 1821, 2133, 2161, 2404, 2763, 2784
MboI	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
MfeI	CAATTG	3 cut(s)	1559, 2801, 2955
MflI	RGATCY	3 cut(s)	1037, 1819, 2159
MlsI	TGGCCA	1 cut(s)	1412
MluNI	TGGCCA	1 cut(s)	1412
MlyI	GAGTC	5 cut(s)	16, 107, 492, 2450, 2960
MmeI	TCCRAC	2 cut(s)	555, 1491
Mox20I	TGGCCA	1 cut(s)	1412
Mph1103I	ATGCAT	2 cut(s)	1264, 2731
MroI	TCCGGA	2 cut(s)	256, 838
MroXI	GAANNNNTTC	3 cut(s)	465, 1190, 2293
MscI	TGGCCA	1 cut(s)	1412
MslI	CAYNNNNRTG	1 cut(s)	610
Msp20I	TGGCCA	1 cut(s)	1412
MspCI	CTTAAG	3 cut(s)	527, 1447, 2663
MspI	CCGG	5 cut(s)	257, 571, 839, 1740, 2349
MspR9I	CCNGG	2 cut(s)	1741, 1754
MunI	CAATTG	3 cut(s)	1559, 2801, 2955
Mva1269I	GAATGC	2 cut(s)	697, 1523
MvaI	CCWGG	1 cut(s)	1754
MvnI	CGCG	2 cut(s)	1761, 2004
NciI	CCSGG	1 cut(s)	1741
NcoI	CCATGG	2 cut(s)	364, 1413
NdeI	CATATG	1 cut(s)	2686
NdeII	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
NheI	GCTAGC	1 cut(s)	2447
NlaIV	GGNNCC	4 cut(s)	1039, 2022, 2808, 3009
NmeAIII	GCCGAG	1 cut(s)	704
NsbI	TGCGCA	2 cut(s)	1522, 2270
NsiI	ATGCAT	2 cut(s)	1264, 2731
PaqCI	CACCTGC	1 cut(s)	1315
PciSI	GCTCTTC	1 cut(s)	471
PcsI	WCGNNNNNNNCGW	1 cut(s)	2763
PctI	GAATGC	2 cut(s)	697, 1523
PdmI	GAANNNNTTC	3 cut(s)	465, 1190, 2293
PfeI	GAWTC	4 cut(s)	306, 1049, 1267, 2668
PflFI	GACNNNGTC	2 cut(s)	97, 669
PleI	GAGTC	5 cut(s)	16, 106, 491, 2450, 2959
PpsI	GAGTC	5 cut(s)	16, 106, 491, 2450, 2959
PshBI	ATTAAT	1 cut(s)	978
Psp124BI	GAGCTC	4 cut(s)	446, 1344, 1715, 2635
Psp6I	CCWGG	1 cut(s)	1752
PspFI	CCCAGC	1 cut(s)	487
PspGI	CCWGG	1 cut(s)	1752
PspN4I	GGNNCC	4 cut(s)	1039, 2022, 2808, 3009
PspPI	GGNCC	3 cut(s)	2806, 2895, 3007
PstI	CTGCAG	1 cut(s)	2217
PstNI	CAGNNNCTG	3 cut(s)	494, 1330, 1652
PsuI	RGATCY	3 cut(s)	1037, 1819, 2159
PsyI	GACNNNGTC	2 cut(s)	97, 669
RsaI	GTAC	6 cut(s)	626, 1673, 1751, 2436, 2756, 2828
RsaNI	GTAC	6 cut(s)	625, 1672, 1750, 2435, 2755, 2827
RseI	CAYNNNNRTG	1 cut(s)	610
SacI	GAGCTC	4 cut(s)	446, 1344, 1715, 2635
SalI	GTCGAC	1 cut(s)	1244
SapI	GCTCTTC	1 cut(s)	471
Sau3AI	GATC	9 cut(s)	649, 835, 1037, 1819, 2131, 2159, 2402, 2761, 2782
Sau96I	GGNCC	3 cut(s)	2806, 2895, 3007
ScaI	AGTACT	1 cut(s)	626
SchI	GAGTC	5 cut(s)	16, 107, 492, 2450, 2960
ScrFI	CCNGG	2 cut(s)	1741, 1754
SfaNI	GCATC	8 cut(s)	1213, 1249, 1564, 2109, 2434, 2474, 2738, 2804
SfcI	CTRYAG	3 cut(s)	228, 2213, 2877
SinI	GGWCC	2 cut(s)	2806, 3007
SmiMI	CAYNNNNRTG	1 cut(s)	610
SmlI	CTYRAG	6 cut(s)	503, 527, 1447, 1577, 2501, 2663
SmoI	CTYRAG	6 cut(s)	503, 527, 1447, 1577, 2501, 2663
SsiI	CCGC	8 cut(s)	369, 773, 789, 1622, 1948, 2278, 2378, 2591
SspI	AATATT	1 cut(s)	1691
SspMI	CTAG	3 cut(s)	1011, 1131, 2448
SstI	GAGCTC	4 cut(s)	446, 1344, 1715, 2635
StyD4I	CCNGG	2 cut(s)	1739, 1752
StyI	CCWWGG	3 cut(s)	364, 1392, 1413
TaaI	ACNGT	6 cut(s)	669, 1283, 1492, 1937, 2244, 2759
TaiI	ACGT	1 cut(s)	1706
TaqII	GACCGA	1 cut(s)	318
TatI	WGTACW	3 cut(s)	624, 1671, 2434
TauI	GCSGC	3 cut(s)	372, 776, 1625
TfiI	GAWTC	4 cut(s)	306, 1049, 1267, 2668
TscAI	CASTG	4 cut(s)	919, 1653, 1810, 2850
TspGWI	ACGGA	2 cut(s)	1231, 2377
TspRI	CASTG	4 cut(s)	919, 1653, 1810, 2850
Tth111I	GACNNNGTC	2 cut(s)	97, 669
Vha464I	CTTAAG	3 cut(s)	527, 1447, 2663
VpaK11BI	GGWCC	2 cut(s)	2806, 3007
VspI	ATTAAT	1 cut(s)	978
XapI	RAATTY	2 cut(s)	1376, 1861
XmiI	GTMKAC	3 cut(s)	1245, 1700, 2322
XmnI	GAANNNNTTC	3 cut(s)	465, 1190, 2293
XspI	CTAG	3 cut(s)	1011, 1131, 2448
ZrmI	AGTACT	1 cut(s)	626
Zsp2I	ATGCAT	2 cut(s)	1264, 2731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.