Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002635

Physical Location & Seq

Genomic Coordinates Reverse (-)

3693311 .. 3697958

Gene Structure 4648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G052500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGCAGAAGATTTATTGTCATTTAGATATGCGTGGTCTAAAGCTTTTAGACCGATTCACAAGTACCCAAGTCCACGCTCTCAATCCTACAGACACCTCCAATGGTAAAACCCATGTTGGTGTTTCAAGAGCTAAGCTTAACAGTCACCTGATTAAATCTTTTGGGTCAAATTCAAAGCCCAAAAGTTTCAACTCACTCTCTGTGACTGAAGCTCTTCTGCTGCCTTATGGACTTCCTGCAACTGACCTGCTTGAACCCTCCATAGAGCCTCACCTCAAGCCCACTGAATTTGTTGAAATCTTAGCTGACCTCTATCACCGCTTAGAGAATTGCTCGTCTCAATCTGATAAATCTTTGTTATCTATTGAGCAGTATTCTCTCTTGCGCAATCTTGGTGACCCCAAGCTGCTTCGCCGGTGTCTTCGTGCTGCTCGTCAAAATGCTGTTGATGTAAACTCTAAGGTTGTGCTTTCGGCTTGGTTGAGGTTTGAGAGGAGAGAGGATGAGCTTGTGGGTATGTCAGCTATGGCTTGTAGTGGGCAAGTTCTTGAGTGTCCTAAGGTTGCTTTGGTAAGTGGGTTTGATCCAAATTTGGTTTCTGGTCATTGCCAATGTGATCATGACCCCAGTAAAGCAGTCAATATGCTTATTTTTGAGGGCAATGAGTGTGTGAGTTTGGAGGAGGAGGAGGAGGAAAGTGATGTTTCATTTTGTATTGGCAATGTAGAAATCAATTGTGCAAGGTGTAAAATTGCATCGCTTTCTAGTCCTTTTGAGGCTATGTTGTATGGATGTTTCAAAGAATCAAAAAAGGGTAAGATTGATTTTTCGGAAAATGGGATATCTGTGAAGGGAATGAGAGCTGTGGAAATGTATAGTAGGACTAGGAGATTGGACTTGTTTAGTCCTGAGATTGTTGTGGAGTTACTTTCTTTTGCAAATAGGTTCTGTTGTGAGGAGATGAAGTCTGCTTGTGATGCTTATTTAGCTTCACTGGTTGATAACATTGATGATGCATTGGTTCTTATTGAGTATGGTTTGGAGGAGATGGCATATCTTCTTGTAGCTGCCTGCTTGCAGGTATTGCTGAGAGGGCTTCCCAGTTCTCTGTATAATCCGAAGGTGATGAAATTTCTTTGTAGCTCCAAGGTCGGGGAGAGATTGGCCATGGCAGGGCATGGATTCTTGTTGTATTATTTTCTAAGCCATGTGGCTATGGAGGAAAGTATGGTATCTAAGACAACTGTGATGCTATTGGAGAGATTGGAAGAATGTACAACCGAGAGGTGGCAGAAAACACTTGTGTTGCATCAATTGGGTTGTGTTTTGCTTGAGAGAAGAGAGTTTAAGGATGCCCAGTTTCGTTTTCTGGCTGCAGCTAAGGCAGGACATGTTTATTCAGTGGCTGGTGTTGCAAGGACCAAATACAAACAGGGGCAGCAGTATTCAGCATATACATTGATGAGCTCTATTATCTCTGAGTATAAACCCGCTGGGTGGATGTACCAGGAACGTGCCCTCTATAACATTGGGAAGGAGAAGATTTTGGATTTGAGCACTGCAACTGAATTAGATCCCACTCTTTTATTTCCATATAAATATAGAGCTGTCGCAAAGGCGGAGGAGAAGCAAATTAGAGCAGCTATTTTGGAGATTGATAGAACTGTTAGGTTTAAGCTCTCACCTGACTGCATTGAATTACGGGCTTGGTTCTTCATCGCACTTGAAGATTATGAAAGTGCTCTCCGAGATATCCGTGTGTTACTAACTTTAGAACCCAATTACATGATGTTTCATGGAAAGGTTAGTGGGGATTACTTGGTTGAGCTTCTCAGCCATCGGGTTAAGCAATTGAGTCAAGCTGATTGCTGGATGCACCTATATGATCAGTGGTCGTCTGTTGATGACATTGGATCTCTGGCAATCATACATCAGATGTTGGGACATAACCCTGGAAAGAGTCTCATTCAGTTTCGGCAATCTTTGCTTCTTTTACGGTTAAATTGTCAGAAGGCTGCAATGCGCAGTTTGCGGTTGGCAAGAAATAATTCTGGATCTGAGCATGAGAGGCTGGTCTATGAAGGATGGATTTTATATGACACTGGAAATCGTGAAGAAGCTCTCTCAAAGGCAGAAAAGTCAATTCACATTCAGAGGTCATTTGAAGCTTTTTTCCTTAAAGCATATGCATTGGCAGATACTAGCCTGGACTCTGAATCATCATCTTATGTTATTCAACTGCTGGAGGAAGCTCTTAAATGTCCTTCAGATGGTCTTCGTAAAGGACAGGCACTAAATAACTTGGGGAGTATATATGTGGATTGTGGTAAGCTGGATAAGGCTGTGGACTGCTACATGAGTGCTCTTGACATCAAACATACAAGAGCTCATCAAGGGTTGGCACGTGTTTATCATCTTAAAAATCAACGAAAAGCCGCATATGATGAGATGACCAAGCTAATAGAGAAAGCACAAAACAATGCATCAGCTTACGAAAAACGGTCAGAGTACTGTGATCCCGAGATGGCAAAGACTGATCTCAATATGGCAACACAATTGGATCCGTTGAGGACATACCCATACAGATACCGGGCAGCAGTTCTGATGGATGAACAAAAGGAGTCTGAAGCTGTAGAAGAGCTTACAAAGGCCATTGCTTTCAAGCCTGACTTGCAAATACTTCATCTTCGAGCTGCATTTCATGAGTCAATTGGAGATGTAAGCTCTGCTCTCCAAGATTGTCAAGCAGCTCTCTGCATGGACCCCAACCACACAGACACTCTTGATTTGTATAATCGGGCACGGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_1 TPR_8

Protein Analysis

937

Amino Acids

105.87

Weight (kDa)

6.08

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51770 AT3G51770
fragaria_vesca	FvH4_3g39300 FvH4_3g39300 FvH4_3g39300 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980
malus_domestica	MD03G1062500.v1.1 MD04G1162900.v1.1 MD11G1066100.v1.1 MD12G1176500.v1.1
prunus_persica	Prupe.6G052500_v2.0.a1 Prupe.6G052500_v2.0.a1 Prupe.6G282400_v2.0.a1
pyrus_communis	pycom03g05010 pycom11g05600 pycom12g16650
rosa_chinensis	RchiOBHm_Chr3g0462291 RchiOBHm_Chr5g0070731
rosa_laevigata	RLG00000024871 RLG00000036154
rosa_multiflora	Rmu_co8338553.1_g000001 Rmu_sc0002944.1_g000041 Rmu_sc0036080.1_g000002
rosa_roxburghii	Rroxscaffold_1G00010460 Rroxscaffold_6G00417610
rosa_rugosa	Rorug03G0055500 Rorug05G0408100 Rorug05G0408200
rosa_samantha	Rh3AG114300 Rh3BG117400 Rh3CG120200 Rh3DG119200 Rh5AG463600 Rh5CG505800 Rh5DG494000
rosa_wichuraiana	Rw3G009650 Rw5G043150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	386, 2024
Acc36I	ACCTGC	2 cut(s)	255, 1069
AciI	CCGC	5 cut(s)	319, 1491, 1619, 2032, 2436
AclWI	GGATC	7 cut(s)	578, 1568, 1921, 2062, 2510, 2555, 2568
AcoI	YGGCCR	1 cut(s)	1164
AcsI	RAATTY	4 cut(s)	169, 287, 589, 1130
AcuI	CTGAAG	3 cut(s)	228, 2250, 2646
AcvI	CACGTG	1 cut(s)	2405
AfaI	GTAC	4 cut(s)	64, 1276, 1505, 2510
AfiI	CCNNNNNNNGG	5 cut(s)	1152, 1173, 1287, 1497, 2270
AflIII	ACRYGT	2 cut(s)	1390, 2404
AjnI	CCWGG	3 cut(s)	1506, 1951, 2205
AjuI	GAANNNNNNNTTGG	2 cut(s)	580, 612
Alw21I	GWGCWC	5 cut(s)	1469, 1559, 1744, 2365, 2389
Alw26I	GTCTC	2 cut(s)	342, 1967
AlwI	GGATC	7 cut(s)	578, 1568, 1921, 2062, 2510, 2555, 2568
AlwNI	CAGNNNCTG	1 cut(s)	1406
Ama87I	CYCGRG	1 cut(s)	2519
AoxI	GGCC	2 cut(s)	1164, 2649
ApoI	RAATTY	4 cut(s)	169, 287, 589, 1130
Asp700I	GAANNNNTTC	2 cut(s)	213, 2047
AspLEI	GCGC	2 cut(s)	387, 2025
AspS9I	GGNCC	2 cut(s)	1419, 2761
AsuC2I	CCSGG	1 cut(s)	2591
AsuHPI	GGTGA	6 cut(s)	137, 263, 308, 407, 1135, 1674
AvaI	CYCGRG	1 cut(s)	2519
AvaII	GGWCC	2 cut(s)	1419, 2761
AxyI	CCTNAGG	1 cut(s)	558
BaeGI	GKGCMC	2 cut(s)	1519, 2803
BalI	TGGCCA	1 cut(s)	1166
BamHI	GGATCC	1 cut(s)	2560
BanII	GRGCYC	2 cut(s)	1469, 2389
BbrPI	CACGTG	1 cut(s)	2405
BbsI	GAAGAC	2 cut(s)	413, 2267
Bbv12I	GWGCWC	5 cut(s)	1469, 1559, 1744, 2365, 2389
BccI	CCATC	6 cut(s)	1042, 1845, 2079, 2264, 2518, 2599
BciT130I	CCWGG	3 cut(s)	1508, 1953, 2207
BclI	TGATCA	2 cut(s)	616, 1885
BcnI	CCSGG	1 cut(s)	2591
BcoDI	GTCTC	2 cut(s)	342, 1967
BfaI	CTAG	3 cut(s)	765, 885, 2202
BfmI	CTRYAG	3 cut(s)	87, 1374, 2631
BfuAI	ACCTGC	2 cut(s)	255, 1069
BlpI	GCTNAGC	1 cut(s)	132
BmcAI	AGTACT	1 cut(s)	2510
Bme1390I	CCNGG	4 cut(s)	1508, 1953, 2207, 2591
Bme18I	GGWCC	2 cut(s)	1419, 2761
BmeT110I	CYCGRG	1 cut(s)	2519
BmgT120I	GGNCC	2 cut(s)	1419, 2761
BmiI	GGNNCC	2 cut(s)	2562, 2763
BmrFI	CCNGG	4 cut(s)	1508, 1953, 2207, 2591
BmrI	ACTGGG	3 cut(s)	621, 1095, 1351
BmsI	GCATC	8 cut(s)	764, 967, 1003, 1239, 1318, 1342, 1863, 2492
BmuI	ACTGGG	3 cut(s)	621, 1095, 1351
BpiI	GAAGAC	2 cut(s)	413, 2267
BplI	GAGNNNNNCTC	2 cut(s)	317, 349
BpmI	CTGGAG	1 cut(s)	2264
Bpu10I	CCTNAGC	1 cut(s)	1380
Bpu1102I	GCTNAGC	1 cut(s)	132
BpuEI	CTTGAG	3 cut(s)	260, 569, 1352
BpuMI	CCSGG	1 cut(s)	2591
BsaAI	YACGTR	1 cut(s)	2405
BsaJI	CCNNGG	3 cut(s)	1146, 1167, 1951
BsaXI	ACNNNNNCTCC	2 cut(s)	950, 980
Bsc4I	CCNNNNNNNGG	5 cut(s)	1152, 1173, 1287, 1497, 2270
Bse118I	RCCGGY	1 cut(s)	414
Bse1I	ACTGG	5 cut(s)	627, 999, 1101, 1357, 2107
Bse21I	CCTNAGG	1 cut(s)	558
Bse3DI	GCAATG	5 cut(s)	604, 667, 727, 2025, 2652
BseBI	CCWGG	3 cut(s)	1508, 1953, 2207
BseDI	CCNNGG	3 cut(s)	1146, 1167, 1951
BseGI	GGATG	7 cut(s)	508, 797, 1357, 1506, 1878, 2090, 2614
BseLI	CCNNNNNNNGG	5 cut(s)	1152, 1173, 1287, 1497, 2270
BseMI	GCAATG	5 cut(s)	604, 667, 727, 2025, 2652
BseMII	CTCAG	5 cut(s)	900, 1079, 1470, 1846, 2049
BseNI	ACTGG	5 cut(s)	627, 999, 1101, 1357, 2107
BseRI	GAGGAG	8 cut(s)	508, 695, 698, 701, 704, 971, 1058, 1637
BseSI	GKGCMC	2 cut(s)	1519, 2803
BseYI	CCCAGC	1 cut(s)	1493
BshFI	GGCC	2 cut(s)	1166, 2651
BsiHKAI	GWGCWC	5 cut(s)	1469, 1559, 1744, 2365, 2389
BsiHKCI	CYCGRG	1 cut(s)	2519
BsiSI	CCGG	2 cut(s)	415, 2590
BslFI	GGGAC	1 cut(s)	1956
BslI	CCNNNNNNNGG	5 cut(s)	1152, 1173, 1287, 1497, 2270
BsmAI	GTCTC	2 cut(s)	342, 1967
BsmBI	CGTCTC	1 cut(s)	342
BsmFI	GGGAC	1 cut(s)	1956
BsnI	GGCC	2 cut(s)	1166, 2651
BsoBI	CYCGRG	1 cut(s)	2519
Bsp1286I	GDGCHC	7 cut(s)	1469, 1519, 1559, 1744, 2365, 2389, 2803
Bsp1407I	TGTACA	1 cut(s)	1274
Bsp143I	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
Bsp1720I	GCTNAGC	1 cut(s)	132
Bsp19I	CCATGG	1 cut(s)	1167
BspACI	CCGC	5 cut(s)	319, 1491, 1619, 2032, 2436
BspANI	GGCC	2 cut(s)	1166, 2651
BspCNI	CTCAG	5 cut(s)	901, 1080, 1471, 1845, 2050
BspHI	TCATGA	2 cut(s)	619, 2701
BspLI	GGNNCC	2 cut(s)	2562, 2763
BspMAI	CTGCAG	1 cut(s)	1378
BspMI	ACCTGC	2 cut(s)	255, 1069
BspPI	GGATC	7 cut(s)	578, 1568, 1921, 2062, 2510, 2555, 2568
BspQI	GCTCTTC	2 cut(s)	219, 2631
BsrDI	GCAATG	5 cut(s)	604, 667, 727, 2025, 2652
BsrFI	RCCGGY	1 cut(s)	414
BsrGI	TGTACA	1 cut(s)	1274
BsrI	ACTGG	5 cut(s)	627, 999, 1101, 1357, 2107
BssAI	RCCGGY	1 cut(s)	414
BssECI	CCNNGG	3 cut(s)	1146, 1167, 1951
BssMI	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
BssT1I	CCWWGG	2 cut(s)	1146, 1167
Bst2UI	CCWGG	3 cut(s)	1508, 1953, 2207
Bst4CI	ACNGT	6 cut(s)	143, 1246, 1666, 1998, 2502, 2513
Bst6I	CTCTTC	3 cut(s)	219, 1333, 2631
BstAPI	GCANNNNNTGC	2 cut(s)	1084, 1984
BstAUI	TGTACA	1 cut(s)	1274
BstBAI	YACGTR	1 cut(s)	2405
BstC8I	GCNNGC	2 cut(s)	1072, 1076
BstDSI	CCRYGG	1 cut(s)	1167
BstEII	GGTNACC	1 cut(s)	395
BstF5I	GGATG	7 cut(s)	508, 797, 1357, 1506, 1878, 2090, 2614
BstHHI	GCGC	2 cut(s)	387, 2025
BstKTI	GATC	9 cut(s)	586, 619, 1576, 1888, 1916, 2057, 2518, 2539, 2563
BstMAI	GTCTC	2 cut(s)	342, 1967
BstMBI	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
BstNI	CCWGG	3 cut(s)	1508, 1953, 2207
BstNSI	RCATGY	1 cut(s)	1394
BstPI	GGTNACC	1 cut(s)	395
BstSCI	CCNGG	4 cut(s)	1506, 1951, 2205, 2589
BstSFI	CTRYAG	3 cut(s)	87, 1374, 2631
BstSLI	GKGCMC	2 cut(s)	1519, 2803
BstV2I	GAAGAC	2 cut(s)	413, 2267
BstX2I	RGATCY	4 cut(s)	1573, 1913, 2054, 2560
BstYI	RGATCY	4 cut(s)	1573, 1913, 2054, 2560
Bsu36I	CCTNAGG	1 cut(s)	558
BsuRI	GGCC	2 cut(s)	1166, 2651
BtgI	CCRYGG	1 cut(s)	1167
BtgZI	GCGATG	2 cut(s)	741, 1702
BtsCI	GGATG	7 cut(s)	508, 797, 1357, 1506, 1878, 2090, 2614
BtsI	GCAGTG	1 cut(s)	1557
BtsIMutI	CAGTG	6 cut(s)	282, 992, 1407, 1557, 1895, 2100
BveI	ACCTGC	2 cut(s)	255, 1069
Cac8I	GCNNGC	2 cut(s)	1072, 1076
CaiI	CAGNNNCTG	1 cut(s)	1406
CciI	TCATGA	2 cut(s)	619, 2701
CfoI	GCGC	2 cut(s)	387, 2025
Cfr10I	RCCGGY	1 cut(s)	414
Cfr13I	GGNCC	2 cut(s)	1419, 2761
Csp6I	GTAC	4 cut(s)	63, 1275, 1504, 2509
CspCI	CAANNNNNGTGG	2 cut(s)	271, 306
CviQI	GTAC	4 cut(s)	63, 1275, 1504, 2509
DpnI	GATC	9 cut(s)	585, 618, 1575, 1887, 1915, 2056, 2517, 2538, 2562
DpnII	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
EaeI	YGGCCR	1 cut(s)	1164
Eam1104I	CTCTTC	3 cut(s)	219, 1333, 2631
EarI	CTCTTC	3 cut(s)	219, 1333, 2631
EciI	GGCGGA	1 cut(s)	1634
Ecl136II	GAGCTC	2 cut(s)	1467, 2387
Eco130I	CCWWGG	2 cut(s)	1146, 1167
Eco24I	GRGCYC	2 cut(s)	1469, 2389
Eco32I	GATATC	2 cut(s)	843, 1753
Eco47I	GGWCC	2 cut(s)	1419, 2761
Eco53kI	GAGCTC	2 cut(s)	1467, 2387
Eco57I	CTGAAG	3 cut(s)	228, 2250, 2646
Eco72I	CACGTG	1 cut(s)	2405
Eco81I	CCTNAGG	1 cut(s)	558
Eco88I	CYCGRG	1 cut(s)	2519
Eco91I	GGTNACC	1 cut(s)	395
EcoICRI	GAGCTC	2 cut(s)	1467, 2387
EcoO65I	GGTNACC	1 cut(s)	395
EcoRII	CCWGG	3 cut(s)	1506, 1951, 2205
EcoRV	GATATC	2 cut(s)	843, 1753
EcoT14I	CCWWGG	2 cut(s)	1146, 1167
EcoT22I	ATGCAT	3 cut(s)	1018, 2191, 2485
EcoT38I	GRGCYC	2 cut(s)	1469, 2389
ErhI	CCWWGG	2 cut(s)	1146, 1167
Esp3I	CGTCTC	1 cut(s)	342
FalI	AAGNNNNNCTT	2 cut(s)	2654, 2686
FaqI	GGGAC	1 cut(s)	1956
FauI	CCCGC	1 cut(s)	1498
FauNDI	CATATG	2 cut(s)	2185, 2440
FbaI	TGATCA	2 cut(s)	616, 1885
FokI	GGATG	7 cut(s)	515, 804, 1364, 1513, 1885, 2097, 2621
FriOI	GRGCYC	2 cut(s)	1469, 2389
FspBI	CTAG	3 cut(s)	765, 885, 2202
FspI	TGCGCA	2 cut(s)	386, 2024
GlaI	GCGC	2 cut(s)	386, 2024
GsaI	CCCAGC	1 cut(s)	1497
GsuI	CTGGAG	1 cut(s)	2264
HaeIII	GGCC	2 cut(s)	1166, 2651
HapII	CCGG	2 cut(s)	415, 2590
HhaI	GCGC	2 cut(s)	387, 2025
Hin6I	GCGC	2 cut(s)	385, 2023
HinP1I	GCGC	2 cut(s)	385, 2023
HindIII	AAGCTT	3 cut(s)	41, 134, 2166
HinfI	GANTC	9 cut(s)	54, 803, 1182, 1855, 1960, 2210, 2216, 2621, 2705
HpaII	CCGG	2 cut(s)	415, 2590
HphI	GGTGA	6 cut(s)	137, 263, 308, 407, 1135, 1674
Hpy166II	GTNNAC	3 cut(s)	73, 454, 2347
Hpy8I	GTNNAC	3 cut(s)	73, 454, 2347
HpyAV	CCTTC	6 cut(s)	844, 1114, 1528, 2005, 2075, 2274
HpyCH4III	ACNGT	6 cut(s)	143, 1246, 1666, 1998, 2502, 2513
HpyCH4IV	ACGT	2 cut(s)	1513, 2404
HpySE526I	ACGT	2 cut(s)	1513, 2404
HspAI	GCGC	2 cut(s)	385, 2023
Ksp22I	TGATCA	2 cut(s)	616, 1885
Kzo9I	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
LguI	GCTCTTC	2 cut(s)	219, 2631
LmnI	GCTCC	1 cut(s)	1148
LweI	GCATC	8 cut(s)	764, 967, 1003, 1239, 1318, 1342, 1863, 2492
MaeI	CTAG	3 cut(s)	765, 885, 2202
MaeII	ACGT	2 cut(s)	1513, 2404
MaeIII	GTNAC	5 cut(s)	143, 202, 395, 924, 1761
MalI	GATC	9 cut(s)	585, 618, 1575, 1887, 1915, 2056, 2517, 2538, 2562
MboI	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
MfeI	CAATTG	5 cut(s)	733, 1313, 1850, 2555, 2709
MflI	RGATCY	4 cut(s)	1573, 1913, 2054, 2560
MhlI	GDGCHC	7 cut(s)	1469, 1519, 1559, 1744, 2365, 2389, 2803
MlsI	TGGCCA	1 cut(s)	1166
MluNI	TGGCCA	1 cut(s)	1166
MlyI	GAGTC	5 cut(s)	1864, 1969, 2204, 2630, 2714
Mox20I	TGGCCA	1 cut(s)	1166
Mph1103I	ATGCAT	3 cut(s)	1018, 2191, 2485
MroXI	GAANNNNTTC	2 cut(s)	213, 2047
MscI	TGGCCA	1 cut(s)	1166
MseI	TTAA	9 cut(s)	138, 153, 1347, 1674, 1845, 2000, 2178, 2256, 2418
MslI	CAYNNNNRTG	2 cut(s)	117, 1881
Msp20I	TGGCCA	1 cut(s)	1166
MspA1I	CMGCKG	1 cut(s)	1493
MspI	CCGG	2 cut(s)	415, 2590
MspR9I	CCNGG	4 cut(s)	1508, 1953, 2207, 2591
MunI	CAATTG	5 cut(s)	733, 1313, 1850, 2555, 2709
MvaI	CCWGG	3 cut(s)	1508, 1953, 2207
NciI	CCSGG	1 cut(s)	2591
NcoI	CCATGG	1 cut(s)	1167
NdeI	CATATG	2 cut(s)	2185, 2440
NdeII	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
NlaIV	GGNNCC	2 cut(s)	2562, 2763
NmuCI	GTSAC	3 cut(s)	143, 202, 395
NsbI	TGCGCA	2 cut(s)	386, 2024
NsiI	ATGCAT	3 cut(s)	1018, 2191, 2485
NspI	RCATGY	1 cut(s)	1394
PagI	TCATGA	2 cut(s)	619, 2701
PciI	ACATGT	1 cut(s)	1390
PciSI	GCTCTTC	2 cut(s)	219, 2631
PcsI	WCGNNNNNNNCGW	1 cut(s)	430
PdmI	GAANNNNTTC	2 cut(s)	213, 2047
PfeI	GAWTC	4 cut(s)	54, 803, 1182, 2216
PleI	GAGTC	5 cut(s)	1863, 1968, 2204, 2629, 2713
PmaCI	CACGTG	1 cut(s)	2405
PmlI	CACGTG	1 cut(s)	2405
PpsI	GAGTC	5 cut(s)	1863, 1968, 2204, 2629, 2713
Ppu21I	YACGTR	1 cut(s)	2405
PscI	ACATGT	1 cut(s)	1390
Psp124BI	GAGCTC	2 cut(s)	1469, 2389
Psp6I	CCWGG	3 cut(s)	1506, 1951, 2205
PspCI	CACGTG	1 cut(s)	2405
PspEI	GGTNACC	1 cut(s)	395
PspFI	CCCAGC	1 cut(s)	1493
PspGI	CCWGG	3 cut(s)	1506, 1951, 2205
PspN4I	GGNNCC	2 cut(s)	2562, 2763
PspPI	GGNCC	2 cut(s)	1419, 2761
PstI	CTGCAG	1 cut(s)	1378
PstNI	CAGNNNCTG	1 cut(s)	1406
PsuI	RGATCY	4 cut(s)	1573, 1913, 2054, 2560
RsaI	GTAC	4 cut(s)	64, 1276, 1505, 2510
RsaNI	GTAC	4 cut(s)	63, 1275, 1504, 2509
RseI	CAYNNNNRTG	2 cut(s)	117, 1881
SacI	GAGCTC	2 cut(s)	1469, 2389
SapI	GCTCTTC	2 cut(s)	219, 2631
SaqAI	TTAA	9 cut(s)	138, 153, 1347, 1674, 1845, 2000, 2178, 2256, 2418
Sau3AI	GATC	9 cut(s)	583, 616, 1573, 1885, 1913, 2054, 2515, 2536, 2560
Sau96I	GGNCC	2 cut(s)	1419, 2761
ScaI	AGTACT	1 cut(s)	2510
SchI	GAGTC	5 cut(s)	1864, 1969, 2204, 2630, 2714
ScrFI	CCNGG	4 cut(s)	1508, 1953, 2207, 2591
SduI	GDGCHC	7 cut(s)	1469, 1519, 1559, 1744, 2365, 2389, 2803
SfaNI	GCATC	8 cut(s)	764, 967, 1003, 1239, 1318, 1342, 1863, 2492
SfcI	CTRYAG	3 cut(s)	87, 1374, 2631
SgrAI	CRCCGGYG	1 cut(s)	414
SinI	GGWCC	2 cut(s)	1419, 2761
SmiMI	CAYNNNNRTG	2 cut(s)	117, 1881
SmlI	CTYRAG	3 cut(s)	275, 548, 1331
SmoI	CTYRAG	3 cut(s)	275, 548, 1331
SsiI	CCGC	5 cut(s)	319, 1491, 1619, 2032, 2436
SspMI	CTAG	3 cut(s)	765, 885, 2202
SstI	GAGCTC	2 cut(s)	1469, 2389
StyD4I	CCNGG	4 cut(s)	1506, 1951, 2205, 2589
StyI	CCWWGG	2 cut(s)	1146, 1167
TaaI	ACNGT	6 cut(s)	143, 1246, 1666, 1998, 2502, 2513
TaiI	ACGT	2 cut(s)	1516, 2407
TaqI	TCGA	1 cut(s)	2689
TaqII	GACCGA	1 cut(s)	66
TatI	WGTACW	2 cut(s)	1274, 2508
TauI	GCSGC	1 cut(s)	2438
TfiI	GAWTC	4 cut(s)	54, 803, 1182, 2216
Tru1I	TTAA	9 cut(s)	138, 153, 1347, 1674, 1845, 2000, 2178, 2256, 2418
Tru9I	TTAA	9 cut(s)	138, 153, 1347, 1674, 1845, 2000, 2178, 2256, 2418
TscAI	CASTG	6 cut(s)	289, 999, 1407, 1564, 1895, 2107
TseFI	GTSAC	3 cut(s)	143, 202, 395
Tsp45I	GTSAC	3 cut(s)	143, 202, 395
TspGWI	ACGGA	2 cut(s)	1745, 2553
TspRI	CASTG	6 cut(s)	289, 999, 1407, 1564, 1895, 2107
VpaK11BI	GGWCC	2 cut(s)	1419, 2761
XapI	RAATTY	4 cut(s)	169, 287, 589, 1130
XceI	RCATGY	1 cut(s)	1394
XmnI	GAANNNNTTC	2 cut(s)	213, 2047
XspI	CTAG	3 cut(s)	765, 885, 2202
ZrmI	AGTACT	1 cut(s)	2510
Zsp2I	ATGCAT	3 cut(s)	1018, 2191, 2485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.