Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002635

Physical Location & Seq

Genomic Coordinates Reverse (-)

13174241 .. 13178683

Gene Structure 4443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00010460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGCAGAAGATATATTGTCATTTAGATATGCGTGCTCTTAAGTTTCTAGAACGATTCACAAGCACCCAAGTCCATGCTTTGAATCCAGTAGAAACCTCAACTGGTAAAACCCATGGTGGTGTTTCAAGAGCTAAGCTCAACAGTCAACTACTCAAGCCGTTTGGGTCAAACTCAAAGCTCAAATCTTTCAACTCTTCAGTGTCTGTCACTGAAGCTCTTCTTCTTCCTCATGGACTCCCCAATACAGACCTCATTGAACCCTCCATAGAGCCCCACCTCAAACCCATTGACTTTGTTGAGATCTTAGCTGACCTCTATCGGCGGTTAGAGAGTTGTGAATCTCAGTCTGATAGATCATTGTTGTTTGTGGAGCAGTACTCTCTCTTGCGCAGCCTTGGCGACGCCAAATTGCTTCGGAGGTGCTTACGAGCTGCTAGACAGAATGCTGTTGATGTCAACACTAAGGTTGTGCTTTCAGCTTGGTTGAGGTTTGAGAGGAGAGAAGATGAGCTTTCAGGTATGTCAGCTATGGATTGTGGAGGACAGGTTCTTGAGTGTCCTAAGATTGCTTTGGAATATGGGTTTGATCCAAATTTAATTTCTACTCATTGCCATTGTGATCAAGCTCAAACTAAAGCAATTGATGTGCCTAGTTTCAACGAGAATGAGTGTGTGGGTTTAGAGCATGAGGAAAGTGATGTTACATTTTGTATTGGCAATGAAGAAATCAATTGTGTTAGGGGTAAGATTGCGATGCTATCTAGTCCACTTAAGGCTATGTTGTATGGCAGTTTTAAAGAGTCGAGAAAGGGTAGAATAGATTTTTCAGAAAATGGGATATCTGTTAAGGGAATGAGAGCTGTGGAAGTGTATAGTAGGACTAGGAGGTTGGCTTTGTTTGGTCCTGGTGTTGTTGCGGAGCTACTTTGTTTTGCAAATAGGTTCTGTTGTGAGGAGATGAAGTCTGCCTGTGACGCTTATCTAGCTTCGATGGTTGATAACATTGATGATGCGCTGGTTCTTATTGAATATGGTTTGGAGGAGATGGCATATCTTCTTGTTGCTGCTTGCTTGCAGGTATTGTTAAGAGAGTTCCCGAATTCCTTGTACAATCCGAAGGTGATGAAGTTTCTATGTAGCTCCAAGACTAGGGAGAGATTGGCTATGGCCGGGCATGGTTCTTTCTTATTGTATTACTTTCTAAGCCATGTGGCTATGGAGGAAAGTATGGTATCAACTACCACTGTGATGTTGTTGGAGAGGTTGGAAGAATTTGCAACCCAGAAGTGGCAGAAAACACTAGCATTGCATCAACTGGGTTGTGTTTTGCTTGAAAGAAGAGAGTTTAAGGATGCACAATATCGTTTCCTGGCTGCAGTTGAGGCGGGTCATGTCTATTCAGTGGCCGGTGTTGCAAGGACCAAGTACAAGCAGGGGCAACAGTATTCAGCCTATACACTGATGAGCTCTATTATCTCTGAGTATAAGCCAGCAGGGTGGATGTACCAGGAACGCTGCCTCTACAATATTGGGAAGGAAAAGATTTCAGATTTGAACACTGCAACTGAATTAGATCCCATTCTTTCATTTCCATATAAATATAGAGCTATTGCAAAGATGGAGGAGAAGCAAATTAGTGGAGCCATTATTGAGATTGACAAAACTATTAGGTTTAAGCTCTCACCTGACTGCATTGAATTACGGGCTTGGTTCTTCCTCGCTCTTGCAGATTATGAAAGTGCTCTGAGAGATATTCGTGTTTTATTAACTTTAGAACCGAAGTATATGATGTTTCATGGGAAGACTAGGGGGGATTACTTGGTTGAGGTTCTTAGCCATCGGGTTAAGCAAATGACCGAGGCTGATTGCTGGATGCATCTATATGATCAATGGTCTTCTGTTGATGACATTGGTTCTTTGGCTATCATACATCAGATGCTAAGGAACGACCCTGGAAAGAGCCTCCTACTGTTTCGGCAATCTCTACTTCTTTTACGGTTAAACTGTCAGAAGGCTGCAATGCGCAGTTTGCGGTTGGCTAGAAATAATTCTAGCTCTGACCATGAGAGGCTAGTCTATGAAGGATGGATTTTATATGACACGGGAAATCGTGAACAAGCTCTCTCAAAGGCTGAAAAGTCCATTCACACTCAGAGGTCATTTGAAGCTTTTTTCCTCAAAGCATATGTATTGGCAGATACTAGCCTGGACCCTGAATCTTCATCTCATGTTATTCAACTGCTAGAGGAAGCTCTTAAATGCCCATCAGATGGTCTTCGAAAAGGACAGGCATTAAATAACTTGGGGAGTATATATGTTGATTGTGGTAAGCTTGAGGAGGCAGCAAACAGCTACTTGAGTGCTCTTGACATCAAGCATACAAGAGCTCACCAAGGATTGGCACGCGTCTATCATCTTAAAAATCAACGAAAAGCTGCATATGAGGAGATGACCAAGCTAATAGAAAAGGCACAAAATAATGCATCAGCTTACGAGAAGCGATCAGAGTACTGTGATCCTGAGATGGCTAAGAAAGATCTCGATATGGCAACAAATTTGGATCCATTGAGAACGTATCCATACAGATACAGGGCAGCAGTGCTGATGGATGAACAAAAAGAATCGGAAGCAGTAGAAGAGCTTACAAAGGCCATAGCCTTCAAGCCTGACTTGCAAATGCTTCATCTTCGAGCTGCGTTTCATGAGTCAAGTGGAGACCTCAGCTCTGCCCTACCAGATTGTCAAGCAGCTCTCTGCATGGACCCCAACCACACAGATACCCTTGATCTCTATAATAGAGCACGGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_1 TPR_8

Protein Analysis

936

Amino Acids

106.22

Weight (kDa)

6.25

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51770 AT3G51770
fragaria_vesca	FvH4_3g39300 FvH4_3g39300 FvH4_3g39300 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980
malus_domestica	MD03G1062500.v1.1 MD04G1162900.v1.1 MD11G1066100.v1.1 MD12G1176500.v1.1
prunus_persica	Prupe.6G052500_v2.0.a1 Prupe.6G052500_v2.0.a1 Prupe.6G282400_v2.0.a1
pyrus_communis	pycom03g05010 pycom11g05600 pycom12g16650
rosa_chinensis	RchiOBHm_Chr3g0462291 RchiOBHm_Chr5g0070731
rosa_laevigata	RLG00000024871 RLG00000036154
rosa_multiflora	Rmu_co8338553.1_g000001 Rmu_sc0002944.1_g000041 Rmu_sc0036080.1_g000002
rosa_roxburghii	Rroxscaffold_1G00010460 Rroxscaffold_6G00417610
rosa_rugosa	Rorug03G0055500 Rorug05G0408100 Rorug05G0408200
rosa_samantha	Rh3AG114300 Rh3BG117400 Rh3CG120200 Rh3DG119200 Rh5AG463600 Rh5CG505800 Rh5DG494000
rosa_wichuraiana	Rw3G009650 Rw5G043150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	389, 2024
Acc36I	ACCTGC	1 cut(s)	1066
AccB7I	CCANNNNNTGG	2 cut(s)	2270, 2398
AccII	CGCG	1 cut(s)	2406
AciI	CCGC	4 cut(s)	322, 917, 1385, 2032
AclWI	GGATC	5 cut(s)	581, 1568, 2510, 2555, 2568
AcoI	YGGCCR	2 cut(s)	1167, 1404
AcsI	RAATTY	4 cut(s)	592, 1099, 1271, 2554
AcuI	CTGAAG	2 cut(s)	180, 231
AcyI	GRCGYC	1 cut(s)	402
AfaI	GTAC	5 cut(s)	377, 1109, 1427, 1505, 2510
AfiI	CCNNNNNNNGG	4 cut(s)	1149, 1287, 2270, 2398
AflII	CTTAAG	2 cut(s)	38, 770
AflIII	ACRYGT	1 cut(s)	2404
AjnI	CCWGG	5 cut(s)	904, 1368, 1506, 1951, 2205
AjuI	GAANNNNNNNTTGG	2 cut(s)	583, 615
AloI	GAACNNNNNNTCC	2 cut(s)	531, 563
Alw21I	GWGCWC	6 cut(s)	37, 1469, 1744, 2365, 2389, 2803
Alw26I	GTCTC	1 cut(s)	2709
AlwI	GGATC	5 cut(s)	581, 1568, 2510, 2555, 2568
AlwNI	CAGNNNCTG	1 cut(s)	203
AoxI	GGCC	3 cut(s)	1167, 1404, 2649
ApoI	RAATTY	4 cut(s)	592, 1099, 1271, 2554
Asp700I	GAANNNNTTC	2 cut(s)	216, 2047
AspLEI	GCGC	3 cut(s)	390, 1015, 2025
AspS9I	GGNCC	4 cut(s)	902, 1419, 2209, 2761
AsuC2I	CCSGG	1 cut(s)	1171
AsuHPI	GGTGA	3 cut(s)	1132, 1674, 2381
AsuII	TTCGAA	1 cut(s)	2278
AvaII	GGWCC	4 cut(s)	902, 1419, 2209, 2761
BamHI	GGATCC	1 cut(s)	2560
BanII	GRGCYC	3 cut(s)	273, 1469, 2389
BbsI	GAAGAC	3 cut(s)	1808, 1887, 2267
Bbv12I	GWGCWC	6 cut(s)	37, 1469, 1744, 2365, 2389, 2803
BbvCI	CCTCAGC	1 cut(s)	2720
BccI	CCATC	9 cut(s)	985, 1039, 1612, 1845, 2079, 2264, 2272, 2518, 2599
BceAI	ACGGC	1 cut(s)	142
BciT130I	CCWGG	5 cut(s)	906, 1370, 1508, 1953, 2207
BciVI	GTATCC	1 cut(s)	2586
BclI	TGATCA	2 cut(s)	619, 1885
BcnI	CCSGG	1 cut(s)	1171
BcoDI	GTCTC	1 cut(s)	2709
BfmI	CTRYAG	1 cut(s)	1374
BfrI	CTTAAG	2 cut(s)	38, 770
BfuAI	ACCTGC	1 cut(s)	1066
BfuI	GTATCC	1 cut(s)	2586
BglII	AGATCT	2 cut(s)	300, 2536
BlpI	GCTNAGC	1 cut(s)	132
BmcAI	AGTACT	2 cut(s)	377, 2510
Bme1390I	CCNGG	6 cut(s)	906, 1171, 1370, 1508, 1953, 2207
Bme18I	GGWCC	4 cut(s)	902, 1419, 2209, 2761
BmgT120I	GGNCC	4 cut(s)	902, 1419, 2209, 2761
BmiI	GGNNCC	4 cut(s)	1642, 2211, 2562, 2763
BmrFI	CCNGG	6 cut(s)	906, 1171, 1370, 1508, 1953, 2207
BmrI	ACTGGG	1 cut(s)	1325
BmsI	GCATC	8 cut(s)	744, 1000, 1318, 1342, 1863, 1885, 1926, 2492
BmuI	ACTGGG	1 cut(s)	1325
BpiI	GAAGAC	3 cut(s)	1808, 1887, 2267
BplI	GAGNNNNNCTC	4 cut(s)	120, 152, 362, 394
Bpu10I	CCTNAGC	2 cut(s)	1940, 2720
Bpu1102I	GCTNAGC	1 cut(s)	132
Bpu14I	TTCGAA	1 cut(s)	2278
BpuEI	CTTGAG	4 cut(s)	137, 572, 2354, 2377
BpuMI	CCSGG	1 cut(s)	1171
BsaHI	GRCGYC	1 cut(s)	402
BsaI	GGTCTC	1 cut(s)	2709
BsaJI	CCNNGG	5 cut(s)	112, 394, 1857, 1951, 2392
BsaXI	ACNNNNNCTCC	4 cut(s)	531, 561, 947, 977
Bsc4I	CCNNNNNNNGG	4 cut(s)	1149, 1287, 2270, 2398
Bse118I	RCCGGY	1 cut(s)	1406
Bse1I	ACTGG	3 cut(s)	86, 106, 1320
Bse3DI	GCAATG	4 cut(s)	607, 724, 1304, 2025
BseBI	CCWGG	5 cut(s)	906, 1370, 1508, 1953, 2207
BseDI	CCNNGG	5 cut(s)	112, 394, 1857, 1951, 2392
BseGI	GGATG	5 cut(s)	1357, 1506, 1878, 2090, 2614
BseLI	CCNNNNNNNGG	4 cut(s)	1149, 1287, 2270, 2398
BseMI	GCAATG	4 cut(s)	607, 724, 1304, 2025
BseMII	CTCAG	6 cut(s)	356, 1470, 1736, 2165, 2511, 2734
BseNI	ACTGG	3 cut(s)	86, 106, 1320
BseRI	GAGGAG	6 cut(s)	511, 968, 1055, 1637, 2351, 2459
Bsh1236I	CGCG	1 cut(s)	2406
BshFI	GGCC	3 cut(s)	1169, 1406, 2651
BsiHKAI	GWGCWC	6 cut(s)	37, 1469, 1744, 2365, 2389, 2803
BsiSI	CCGG	2 cut(s)	1170, 1407
BslI	CCNNNNNNNGG	4 cut(s)	1149, 1287, 2270, 2398
BsmAI	GTCTC	1 cut(s)	2709
BsmI	GAATGC	1 cut(s)	448
BsnI	GGCC	3 cut(s)	1169, 1406, 2651
Bso31I	GGTCTC	1 cut(s)	2709
Bsp119I	TTCGAA	1 cut(s)	2278
Bsp1286I	GDGCHC	7 cut(s)	37, 273, 1469, 1744, 2365, 2389, 2803
Bsp1407I	TGTACA	1 cut(s)	1107
Bsp1720I	GCTNAGC	1 cut(s)	132
Bsp19I	CCATGG	1 cut(s)	112
BspACI	CCGC	4 cut(s)	322, 917, 1385, 2032
BspANI	GGCC	3 cut(s)	1169, 1406, 2651
BspCNI	CTCAG	6 cut(s)	355, 1471, 1737, 2164, 2512, 2733
BspFNI	CGCG	1 cut(s)	2406
BspHI	TCATGA	1 cut(s)	2701
BspLI	GGNNCC	4 cut(s)	1642, 2211, 2562, 2763
BspMAI	CTGCAG	1 cut(s)	1378
BspMI	ACCTGC	1 cut(s)	1066
BspPI	GGATC	5 cut(s)	581, 1568, 2510, 2555, 2568
BspQI	GCTCTTC	2 cut(s)	222, 2631
BspT104I	TTCGAA	1 cut(s)	2278
BspTI	CTTAAG	2 cut(s)	38, 770
BspTNI	GGTCTC	1 cut(s)	2709
BsrDI	GCAATG	4 cut(s)	607, 724, 1304, 2025
BsrFI	RCCGGY	1 cut(s)	1406
BsrGI	TGTACA	1 cut(s)	1107
BsrI	ACTGG	3 cut(s)	86, 106, 1320
BssAI	RCCGGY	1 cut(s)	1406
BssECI	CCNNGG	5 cut(s)	112, 394, 1857, 1951, 2392
BssNI	GRCGYC	1 cut(s)	402
BssT1I	CCWWGG	3 cut(s)	112, 394, 2392
Bst2UI	CCWGG	5 cut(s)	906, 1370, 1508, 1953, 2207
Bst4CI	ACNGT	7 cut(s)	143, 1246, 1443, 1971, 1998, 2006, 2513
Bst6I	CTCTTC	4 cut(s)	199, 222, 1333, 2631
BstACI	GRCGYC	1 cut(s)	402
BstAFI	CTTAAG	2 cut(s)	38, 770
BstAUI	TGTACA	1 cut(s)	1107
BstBI	TTCGAA	1 cut(s)	2278
BstC8I	GCNNGC	5 cut(s)	33, 1069, 1073, 1491, 2404
BstDSI	CCRYGG	1 cut(s)	112
BstF5I	GGATG	5 cut(s)	1357, 1506, 1878, 2090, 2614
BstFNI	CGCG	1 cut(s)	2406
BstHHI	GCGC	3 cut(s)	390, 1015, 2025
BstMAI	GTCTC	1 cut(s)	2709
BstMWI	GCNNNNNNNGC	7 cut(s)	396, 974, 983, 1382, 1412, 2029, 2671
BstNI	CCWGG	5 cut(s)	906, 1370, 1508, 1953, 2207
BstSCI	CCNGG	6 cut(s)	904, 1169, 1368, 1506, 1951, 2205
BstSFI	CTRYAG	1 cut(s)	1374
BstUI	CGCG	1 cut(s)	2406
BstV2I	GAAGAC	3 cut(s)	1808, 1887, 2267
BstX2I	RGATCY	4 cut(s)	300, 1573, 2536, 2560
BstXI	CCANNNNNNTGG	1 cut(s)	1497
BstYI	RGATCY	4 cut(s)	300, 1573, 2536, 2560
BsuI	GTATCC	1 cut(s)	2586
BsuRI	GGCC	3 cut(s)	1169, 1406, 2651
BtgI	CCRYGG	1 cut(s)	112
BtgZI	GCGATG	1 cut(s)	767
BtsCI	GGATG	5 cut(s)	1357, 1506, 1878, 2090, 2614
BtsI	GCAGTG	2 cut(s)	1557, 2604
BtsIMutI	CAGTG	7 cut(s)	204, 207, 1242, 1407, 1457, 1557, 2604
BveI	ACCTGC	1 cut(s)	1066
Cac8I	GCNNGC	5 cut(s)	33, 1069, 1073, 1491, 2404
CaiI	CAGNNNCTG	1 cut(s)	203
CciI	TCATGA	1 cut(s)	2701
CfoI	GCGC	3 cut(s)	390, 1015, 2025
Cfr10I	RCCGGY	1 cut(s)	1406
Cfr13I	GGNCC	4 cut(s)	902, 1419, 2209, 2761
CseI	GACGC	3 cut(s)	410, 983, 2395
Csp6I	GTAC	5 cut(s)	376, 1108, 1426, 1504, 2509
CviQI	GTAC	5 cut(s)	376, 1108, 1426, 1504, 2509
DraI	TTTAAA	1 cut(s)	796
EaeI	YGGCCR	2 cut(s)	1167, 1404
Eam1104I	CTCTTC	4 cut(s)	199, 222, 1333, 2631
EarI	CTCTTC	4 cut(s)	199, 222, 1333, 2631
Ecl136II	GAGCTC	2 cut(s)	1467, 2387
Eco130I	CCWWGG	3 cut(s)	112, 394, 2392
Eco24I	GRGCYC	3 cut(s)	273, 1469, 2389
Eco31I	GGTCTC	1 cut(s)	2709
Eco32I	GATATC	1 cut(s)	840
Eco47I	GGWCC	4 cut(s)	902, 1419, 2209, 2761
Eco53kI	GAGCTC	2 cut(s)	1467, 2387
Eco57I	CTGAAG	2 cut(s)	180, 231
EcoICRI	GAGCTC	2 cut(s)	1467, 2387
EcoRI	GAATTC	1 cut(s)	1099
EcoRII	CCWGG	5 cut(s)	904, 1368, 1506, 1951, 2205
EcoRV	GATATC	1 cut(s)	840
EcoT14I	CCWWGG	3 cut(s)	112, 394, 2392
EcoT22I	ATGCAT	2 cut(s)	1878, 2485
EcoT38I	GRGCYC	3 cut(s)	273, 1469, 2389
ErhI	CCWWGG	3 cut(s)	112, 394, 2392
FalI	AAGNNNNNCTT	6 cut(s)	204, 236, 495, 527, 2654, 2686
FauI	CCCGC	1 cut(s)	1378
FauNDI	CATATG	2 cut(s)	2185, 2440
FbaI	TGATCA	2 cut(s)	619, 1885
FokI	GGATG	5 cut(s)	1364, 1513, 1885, 2097, 2621
FriOI	GRGCYC	3 cut(s)	273, 1469, 2389
FspI	TGCGCA	2 cut(s)	389, 2024
GlaI	GCGC	3 cut(s)	389, 1014, 2024
HaeIII	GGCC	3 cut(s)	1169, 1406, 2651
HapII	CCGG	2 cut(s)	1170, 1407
HgaI	GACGC	3 cut(s)	410, 983, 2395
HhaI	GCGC	3 cut(s)	390, 1015, 2025
Hin1I	GRCGYC	1 cut(s)	402
Hin6I	GCGC	3 cut(s)	388, 1013, 2023
HinP1I	GCGC	3 cut(s)	388, 1013, 2023
HincII	GTYRAC	2 cut(s)	146, 457
HindII	GTYRAC	2 cut(s)	146, 457
HindIII	AAGCTT	2 cut(s)	2166, 2330
HinfI	GANTC	8 cut(s)	54, 82, 234, 338, 800, 2216, 2621, 2705
HpaII	CCGG	2 cut(s)	1170, 1407
HphI	GGTGA	3 cut(s)	1132, 1674, 2381
Hpy166II	GTNNAC	4 cut(s)	146, 457, 767, 2114
Hpy8I	GTNNAC	4 cut(s)	146, 457, 767, 2114
Hpy99I	CGWCG	1 cut(s)	404
HpyAV	CCTTC	5 cut(s)	1111, 1528, 2005, 2075, 2668
HpyCH4III	ACNGT	7 cut(s)	143, 1246, 1443, 1971, 1998, 2006, 2513
HpyCH4IV	ACGT	1 cut(s)	2573
HpyF10VI	GCNNNNNNNGC	7 cut(s)	396, 974, 983, 1382, 1412, 2029, 2671
HpySE526I	ACGT	1 cut(s)	2573
Hsp92I	GRCGYC	1 cut(s)	402
HspAI	GCGC	3 cut(s)	388, 1013, 2023
Ksp22I	TGATCA	2 cut(s)	619, 1885
LguI	GCTCTTC	2 cut(s)	222, 2631
LmnI	GCTCC	4 cut(s)	370, 919, 1145, 1640
LweI	GCATC	8 cut(s)	744, 1000, 1318, 1342, 1863, 1885, 1926, 2492
MaeII	ACGT	1 cut(s)	2573
MaeIII	GTNAC	3 cut(s)	205, 700, 971
MfeI	CAATTG	2 cut(s)	639, 730
MflI	RGATCY	4 cut(s)	300, 1573, 2536, 2560
MhlI	GDGCHC	7 cut(s)	37, 273, 1469, 1744, 2365, 2389, 2803
MluI	ACGCGT	1 cut(s)	2404
MlyI	GAGTC	3 cut(s)	228, 809, 2714
MmeI	TCCRAC	2 cut(s)	1236, 1245
Mph1103I	ATGCAT	2 cut(s)	1878, 2485
MroXI	GAANNNNTTC	2 cut(s)	216, 2047
MslI	CAYNNNNRTG	3 cut(s)	117, 1247, 1881
MspCI	CTTAAG	2 cut(s)	38, 770
MspI	CCGG	2 cut(s)	1170, 1407
MspR9I	CCNGG	6 cut(s)	906, 1171, 1370, 1508, 1953, 2207
MunI	CAATTG	2 cut(s)	639, 730
Mva1269I	GAATGC	1 cut(s)	448
MvaI	CCWGG	5 cut(s)	906, 1370, 1508, 1953, 2207
MvnI	CGCG	1 cut(s)	2406
MwoI	GCNNNNNNNGC	7 cut(s)	396, 974, 983, 1382, 1412, 2029, 2671
NciI	CCSGG	1 cut(s)	1171
NcoI	CCATGG	1 cut(s)	112
NdeI	CATATG	2 cut(s)	2185, 2440
NlaIV	GGNNCC	4 cut(s)	1642, 2211, 2562, 2763
NmuCI	GTSAC	2 cut(s)	205, 971
NsbI	TGCGCA	2 cut(s)	389, 2024
NsiI	ATGCAT	2 cut(s)	1878, 2485
NspV	TTCGAA	1 cut(s)	2278
PagI	TCATGA	1 cut(s)	2701
PciSI	GCTCTTC	2 cut(s)	222, 2631
PctI	GAATGC	1 cut(s)	448
PdmI	GAANNNNTTC	2 cut(s)	216, 2047
PfeI	GAWTC	5 cut(s)	54, 82, 338, 2216, 2621
PflMI	CCANNNNNTGG	2 cut(s)	2270, 2398
PleI	GAGTC	3 cut(s)	228, 808, 2713
PpsI	GAGTC	3 cut(s)	228, 808, 2713
Psp124BI	GAGCTC	2 cut(s)	1469, 2389
Psp6I	CCWGG	5 cut(s)	904, 1368, 1506, 1951, 2205
PspGI	CCWGG	5 cut(s)	904, 1368, 1506, 1951, 2205
PspN4I	GGNNCC	4 cut(s)	1642, 2211, 2562, 2763
PspPI	GGNCC	4 cut(s)	902, 1419, 2209, 2761
PstI	CTGCAG	1 cut(s)	1378
PstNI	CAGNNNCTG	1 cut(s)	203
PsuI	RGATCY	4 cut(s)	300, 1573, 2536, 2560
RsaI	GTAC	5 cut(s)	377, 1109, 1427, 1505, 2510
RsaNI	GTAC	5 cut(s)	376, 1108, 1426, 1504, 2509
RseI	CAYNNNNRTG	3 cut(s)	117, 1247, 1881
SacI	GAGCTC	2 cut(s)	1469, 2389
SapI	GCTCTTC	2 cut(s)	222, 2631
Sau96I	GGNCC	4 cut(s)	902, 1419, 2209, 2761
ScaI	AGTACT	2 cut(s)	377, 2510
SchI	GAGTC	3 cut(s)	228, 809, 2714
ScrFI	CCNGG	6 cut(s)	906, 1171, 1370, 1508, 1953, 2207
SduI	GDGCHC	7 cut(s)	37, 273, 1469, 1744, 2365, 2389, 2803
SfaNI	GCATC	8 cut(s)	744, 1000, 1318, 1342, 1863, 1885, 1926, 2492
SfcI	CTRYAG	1 cut(s)	1374
SfuI	TTCGAA	1 cut(s)	2278
SinI	GGWCC	4 cut(s)	902, 1419, 2209, 2761
SmiMI	CAYNNNNRTG	3 cut(s)	117, 1247, 1881
SmlI	CTYRAG	6 cut(s)	38, 152, 551, 770, 2333, 2356
SmoI	CTYRAG	6 cut(s)	38, 152, 551, 770, 2333, 2356
SsiI	CCGC	4 cut(s)	322, 917, 1385, 2032
SspI	AATATT	1 cut(s)	1528
SstI	GAGCTC	2 cut(s)	1469, 2389
StyD4I	CCNGG	6 cut(s)	904, 1169, 1368, 1506, 1951, 2205
StyI	CCWWGG	3 cut(s)	112, 394, 2392
TaaI	ACNGT	7 cut(s)	143, 1246, 1443, 1971, 1998, 2006, 2513
TaiI	ACGT	1 cut(s)	2576
TaqI	TCGA	5 cut(s)	803, 989, 2278, 2541, 2689
TaqII	GACCGA	1 cut(s)	1871
TatI	WGTACW	4 cut(s)	375, 1107, 1425, 2508
TfiI	GAWTC	5 cut(s)	54, 82, 338, 2216, 2621
TscAI	CASTG	7 cut(s)	204, 214, 1249, 1407, 1464, 1564, 2604
TseFI	GTSAC	2 cut(s)	205, 971
Tsp45I	GTSAC	2 cut(s)	205, 971
TspRI	CASTG	7 cut(s)	204, 214, 1249, 1407, 1464, 1564, 2604
Van91I	CCANNNNNTGG	2 cut(s)	2270, 2398
Vha464I	CTTAAG	2 cut(s)	38, 770
VpaK11BI	GGWCC	4 cut(s)	902, 1419, 2209, 2761
XapI	RAATTY	4 cut(s)	592, 1099, 1271, 2554
XbaI	TCTAGA	1 cut(s)	46
XmnI	GAANNNNTTC	2 cut(s)	216, 2047
ZrmI	AGTACT	2 cut(s)	377, 2510
Zsp2I	ATGCAT	2 cut(s)	1878, 2485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.