Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0002635

Physical Location & Seq

Genomic Coordinates Forward (+)

25674230 .. 25678312

Gene Structure 4083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1176500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2856 bp

ATGCAGCATAATATATTTACTACAATGCGGAGCTTGAAGATCATGGATGGGTGTAAAGGAAGTCAAGTTTTCGCGCTTAATCCTTCCGGAGCTACTGCCGCCGGCGGAAACGGCGGTGGTGGTGGTGGTTCGGGGGACAAGCTTCTTTACGACCATCTCCGGGTCAACTCGATTCGATCCAGAGCGAGTCGGGGCAGTTTTCAGGCTCCGAACCCTACCGCCAACAATGTTTTGCTCGAGACTCTTCTCCCTTACGGTCTGCCGGTGTCCGATCTCCTTGAGCCCCAAATCGAACCATCCCTCAAATCGGTCGATTTTGTGGAAACCCTAGCTGATGTGTACCGTAGGATTGTGATTTGCCCCCAATTCGAGAAGTGGAAGATGTATTTGGAGCAATGTGCGACGTTTCGGGGCCTTTCGGATCCGAAATTGTTCCGGCGGAGCCTCAGGTCGGCGAGGCAGCACGCGGTTGATGTGCACTCGAAGGTGGTGCTGACGTCTTGGTTGAGGTATGAGAGGAGAGAGGATGAGCTTATTGGGTCGTCAGCAATGTATTGTTGTGGTAGAAATGTTGAATGTCCGAAGGCTAGTTTGGTTTCCGGGTACGATCCTGAGTCTGTTTTTGAGTCTTGTATGTGTTCTAGGACGCCGCAGGGGCAAGGTGACGATGATGATCTTGTGATGGGGGATGAGGAATGTTCCACTTCGGAGGAGGATGGTGATATGTCGTTTTGTATTGGAGATGCCGAGATTAGGTGTGTTCGATACAACATTGCTTCGCTTTCGAGGCCTTTTAATGCAATGTTGTATGGTAACTTCACGGAGACACGAAGGGAGAAGATAAATTTCACACAGAATGGGATATCTGTGGAGGCAATGAGGGCAGTGGAGATTTTTAGCAGGATAAAAAGAGTAGATTCTTTTGAAGTGAAAACTGTTTTGGACCTGCTATCCTTTGCAAACACGTTTTGTTGCGATGAGTTGAAGACGGCATGTGATTCTCATTTGGCATCTCTGGTTTGTGAACTGGAAGATGCAATGCTGCTGATTGACTATGGGTTGGAGGAGACTGCTCATTTTCTCGTGGCAGCTTGTTTGCAGGTGTTTTTGAGGGAGCTACCGAGTTCGTTGCACAATTCTCATATGATGAGATTATTTTGTACTTCAGAAGCTAGGCAAAGGTTGGCTATGTCCGGGCACTCTTCTTTCATTTTGTATTATTTTTTGAGCCAGGTTGCTATTGAGGATGACATGAGATCGAACACAACGGTGATGCTTCTAGAGAGGCTGGCAGAGTGTGCCACCGAAAGTTGGCAGAAGCAACTTGCATTTCACCTGTTGGGTGTTGTGATGCTTGAGAGGAAAGAATTTAAAGATGCTCAGTGGTGGTTTGAAGCAGCAGTAGAGGTTGGTCATATTTATTCCTTGGTGGGCATTGCAAGGGCCAAGTTCAAGCGTGGCCATAAGTATGCGGCTTACAAGCAAATGAACTCTCTCATTTCTGATTATACACCGGTTGGGTGGATGTATCAGGAGCGATCTCTGTATTGTATTGGAAAGGAAAAGATGATGGATTTGAGCACCGCTACTCACTTGGATCCAACTCTATCTTATCCATACAAGTATAGGGCTGTTTCTTTGTTGGAGGAGAACCAGTTTGAAGCAGCTATTACAGAGATCAATAAGATAATTAGTTTCAAGGTCTCCCCTGATTGTCTCGAATTGAGGGCTTGGTTTTCAATTGCCCTCGAAGATTTTGAAGGAGCTCTCAGAGATGTCCGGGCACTCTTGACTTTGGACCCAAATTACATGATGTTTCATGGGAAAATGCATGGTGACCATCTGGTAGAGCTGCTCTGCCCTTTTGTTCAACAGTGGAGTCAGGCTGATTGTTGGATGCAACTATATGATCGATGGTCCTCTGTTGATGATATTGGTTCTCTAGCTGTTGTACATCATATGTTGGCAAATGACCCTGGGAAGAGCCTTCTACGCTTTAGGCAGTCTCTCCTTCTGTTGCGGTTAAATTGTCAAAAGGCTGCTATGCATAGTCTGCGGTTGGCCCGGAATCATTCTAGTTCTGAGCATGAGAGGCTTGTCTATGAAGGATGGATCTTGTATGACACTGGCCATCGGGAAGAAGCATTGGCAAAGGCAGAGGAGTCCATTGCTATCCAGAGATCGTTTGAAGCATTTTTCCTTAAAGCATATGCTTTAGCAGACTCAAGTCTTGATTCTGATTCTTCAACATATGTGATCCAGCTTCTAGAGGAAGCACTTAGATGCCCTTCGGATGGTCTTAGAAAAGGACAAGCACTAAATAATTTAGGAAGTGTCTATGTAGATTCTGATAAGCTGGATCTTGCTGCCGATTGCTACACAAATGCACTCAACATTAAGCATACGAGAGCACATCAGGGTCTAGCACGAGTATATCATCTTAAAAATCAACGCAAGGCTGCATATGATGAGATGACAAAGCTGATAGAGAAGGCTCGAAACAATGCATCAGCTTTTGAGAAACGTTCAGAATACTGTGACCGTGACATGGCAAAGAGTGATCTAAGTATGGCAACACAACTAGATCCCCTGAGGACATATCCGTACAGATATAGGGCAGCAGTTTTGATGGATGACCACAAAGAAGGAGAAGCCATCGAAGAGCTAACAAAAGCCATAACTTTCAAGCTAGACCTGCAACTGCTACATCTTCGAGCAGCATTCCACGAGTCAATGAGCAATTTTGTTTTCACTGTGCGAGACTGTGAAGCAGCCCTCTGTCTTGATCCCAACCATGCTGACACTCAGGAACTCTATTCTAAAGCACGGGAACGTGTCAATGAACAAAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_8

Protein Analysis

952

Amino Acids

108.01

Weight (kDa)

5.78

Isoelectric Point (pI)

48.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51770 AT3G51770
fragaria_vesca	FvH4_3g39300 FvH4_3g39300 FvH4_3g39300 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980
malus_domestica	MD03G1062500.v1.1 MD04G1162900.v1.1 MD11G1066100.v1.1 MD12G1176500.v1.1
prunus_persica	Prupe.6G052500_v2.0.a1 Prupe.6G052500_v2.0.a1 Prupe.6G282400_v2.0.a1
pyrus_communis	pycom03g05010 pycom11g05600 pycom12g16650
rosa_chinensis	RchiOBHm_Chr3g0462291 RchiOBHm_Chr5g0070731
rosa_laevigata	RLG00000024871 RLG00000036154
rosa_multiflora	Rmu_co8338553.1_g000001 Rmu_sc0002944.1_g000041 Rmu_sc0036080.1_g000002
rosa_roxburghii	Rroxscaffold_1G00010460 Rroxscaffold_6G00417610
rosa_rugosa	Rorug03G0055500 Rorug05G0408100 Rorug05G0408200
rosa_samantha	Rh3AG114300 Rh3BG117400 Rh3CG120200 Rh3DG119200 Rh5AG463600 Rh5CG505800 Rh5DG494000
rosa_wichuraiana	Rw3G009650 Rw5G043150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1090
AatII	GACGTC	1 cut(s)	500
Acc36I	ACCTGC	3 cut(s)	954, 1090, 2703
AccII	CGCG	2 cut(s)	74, 467
AccIII	TCCGGA	1 cut(s)	86
AclI	AACGTT	1 cut(s)	2524
AcoI	YGGCCR	2 cut(s)	1459, 2128
AcsI	RAATTY	2 cut(s)	844, 1367
AcuI	CTGAAG	1 cut(s)	1149
AcyI	GRCGYC	2 cut(s)	497, 647
AfaI	GTAC	5 cut(s)	341, 605, 1162, 1953, 2606
AfiI	CCNNNNNNNGG	7 cut(s)	160, 307, 451, 753, 1311, 2294, 2548
AflIII	ACRYGT	2 cut(s)	963, 2833
AgeI	ACCGGT	1 cut(s)	1513
AjnI	CCWGG	2 cut(s)	1230, 1975
AjuI	GAANNNNNNNTTGG	6 cut(s)	371, 403, 575, 607, 923, 955
AleI	CACNNNNGTG	1 cut(s)	1268
Alw21I	GWGCWC	4 cut(s)	480, 1583, 1768, 2413
Alw26I	GTCTC	7 cut(s)	233, 818, 1061, 1708, 1721, 2010, 2754
Alw44I	GTGCAC	1 cut(s)	476
Ama87I	CYCGRG	1 cut(s)	236
Aor13HI	TCCGGA	1 cut(s)	86
AoxI	GGCC	6 cut(s)	412, 788, 1443, 1459, 2061, 2128
ApaLI	GTGCAC	1 cut(s)	476
ApoI	RAATTY	2 cut(s)	844, 1367
AsiGI	ACCGGT	1 cut(s)	1513
Asp700I	GAANNNNTTC	1 cut(s)	431
AspLEI	GCGC	1 cut(s)	76
AspS9I	GGNCC	6 cut(s)	412, 943, 1443, 1798, 1917, 2062
AsuC2I	CCSGG	5 cut(s)	161, 601, 1195, 1781, 2065
AsuHPI	GGTGA	5 cut(s)	674, 731, 1282, 1325, 1847
AvaI	CYCGRG	1 cut(s)	236
AvaII	GGWCC	3 cut(s)	943, 1798, 1917
AxyI	CCTNAGG	2 cut(s)	446, 2591
BaeGI	GKGCMC	3 cut(s)	480, 1200, 1786
BalI	TGGCCA	2 cut(s)	1461, 2130
BamHI	GGATCC	2 cut(s)	421, 1597
BanII	GRGCYC	2 cut(s)	285, 1768
BarI	GAAGNNNNNNTAC	2 cut(s)	800, 832
BauI	CACGAG	3 cut(s)	1082, 2427, 2726
BbsI	GAAGAC	1 cut(s)	992
Bbv12I	GWGCWC	4 cut(s)	480, 1583, 1768, 2413
BceAI	ACGGC	2 cut(s)	127, 1005
BcgI	CGANNNNNNTGC	4 cut(s)	472, 506, 1111, 1145
BciT130I	CCWGG	2 cut(s)	1232, 1977
BcnI	CCSGG	5 cut(s)	161, 601, 1195, 1781, 2065
BcoDI	GTCTC	7 cut(s)	233, 818, 1061, 1708, 1721, 2010, 2754
BfuAI	ACCTGC	3 cut(s)	954, 1090, 2703
BglI	GCCNNNNNGGC	1 cut(s)	655
Bme1390I	CCNGG	7 cut(s)	161, 601, 1195, 1232, 1781, 1977, 2065
Bme18I	GGWCC	3 cut(s)	943, 1798, 1917
BmeT110I	CYCGRG	1 cut(s)	236
BmgT120I	GGNCC	6 cut(s)	412, 943, 1443, 1798, 1917, 2062
BmiI	GGNNCC	6 cut(s)	207, 413, 423, 443, 1599, 1800
BmrFI	CCNGG	7 cut(s)	161, 601, 1195, 1232, 1781, 1977, 2065
BmsI	GCATC	9 cut(s)	733, 1019, 1024, 1263, 1341, 1366, 1887, 2273, 2516
BoxI	GACNNNNGTC	1 cut(s)	2226
BpiI	GAAGAC	1 cut(s)	992
BpuEI	CTTGAG	3 cut(s)	299, 1376, 2209
BpuMI	CCSGG	5 cut(s)	161, 601, 1195, 1781, 2065
Bsa29I	ATCGAT	1 cut(s)	1912
BsaBI	GATNNNNATC	1 cut(s)	672
BsaHI	GRCGYC	2 cut(s)	497, 647
BsaI	GGTCTC	1 cut(s)	1708
BsaJI	CCNNGG	3 cut(s)	1425, 1975, 1976
BsaWI	WCCGGW	2 cut(s)	86, 1513
BsaXI	ACNNNNNCTCC	2 cut(s)	1640, 1670
Bsc4I	CCNNNNNNNGG	7 cut(s)	160, 307, 451, 753, 1311, 2294, 2548
Bse118I	RCCGGY	3 cut(s)	101, 262, 1513
Bse1I	ACTGG	3 cut(s)	1032, 1654, 2131
Bse21I	CCTNAGG	2 cut(s)	446, 2591
Bse3DI	GCAATG	8 cut(s)	401, 555, 771, 807, 882, 1044, 1434, 2166
Bse8I	GATNNNNATC	1 cut(s)	672
BseAI	TCCGGA	1 cut(s)	86
BseBI	CCWGG	2 cut(s)	1232, 1977
BseCI	ATCGAT	1 cut(s)	1912
BseDI	CCNNGG	3 cut(s)	1425, 1975, 1976
BseJI	GATNNNNATC	1 cut(s)	672
BseLI	CCNNNNNNNGG	7 cut(s)	160, 307, 451, 753, 1311, 2294, 2548
BseMI	GCAATG	8 cut(s)	401, 555, 771, 807, 882, 1044, 1434, 2166
BseMII	CTCAG	7 cut(s)	460, 603, 1394, 1783, 2073, 2582, 2819
BseNI	ACTGG	3 cut(s)	1032, 1654, 2131
BseRI	GAGGAG	5 cut(s)	532, 725, 1079, 1661, 2174
BseSI	GKGCMC	3 cut(s)	480, 1200, 1786
Bsh1236I	CGCG	2 cut(s)	74, 467
Bsh1285I	CGRYCG	1 cut(s)	312
BshFI	GGCC	6 cut(s)	414, 790, 1445, 1461, 2063, 2130
BshTI	ACCGGT	1 cut(s)	1513
BshVI	ATCGAT	1 cut(s)	1912
BsiEI	CGRYCG	1 cut(s)	312
BsiHKAI	GWGCWC	4 cut(s)	480, 1583, 1768, 2413
BsiHKCI	CYCGRG	1 cut(s)	236
BslFI	GGGAC	1 cut(s)	149
BslI	CCNNNNNNNGG	7 cut(s)	160, 307, 451, 753, 1311, 2294, 2548
BsmAI	GTCTC	7 cut(s)	233, 818, 1061, 1708, 1721, 2010, 2754
BsmFI	GGGAC	1 cut(s)	149
BsmI	GAATGC	1 cut(s)	2720
BsnI	GGCC	6 cut(s)	414, 790, 1445, 1461, 2063, 2130
Bso31I	GGTCTC	1 cut(s)	1708
BsoBI	CYCGRG	1 cut(s)	236
Bsp1286I	GDGCHC	7 cut(s)	285, 480, 1200, 1583, 1768, 1786, 2413
Bsp13I	TCCGGA	1 cut(s)	86
Bsp1407I	TGTACA	1 cut(s)	1951
BspANI	GGCC	6 cut(s)	414, 790, 1445, 1461, 2063, 2130
BspCNI	CTCAG	7 cut(s)	459, 604, 1393, 1782, 2074, 2583, 2818
BspDI	ATCGAT	1 cut(s)	1912
BspEI	TCCGGA	1 cut(s)	86
BspFNI	CGCG	2 cut(s)	74, 467
BspLI	GGNNCC	6 cut(s)	207, 413, 423, 443, 1599, 1800
BspMI	ACCTGC	3 cut(s)	954, 1090, 2703
BspQI	GCTCTTC	2 cut(s)	1976, 2655
BspTNI	GGTCTC	1 cut(s)	1708
BsrDI	GCAATG	8 cut(s)	401, 555, 771, 807, 882, 1044, 1434, 2166
BsrFI	RCCGGY	3 cut(s)	101, 262, 1513
BsrGI	TGTACA	1 cut(s)	1951
BsrI	ACTGG	3 cut(s)	1032, 1654, 2131
BssAI	RCCGGY	3 cut(s)	101, 262, 1513
BssECI	CCNNGG	3 cut(s)	1425, 1975, 1976
BssNI	GRCGYC	2 cut(s)	497, 647
BssSI	CACGAG	3 cut(s)	1082, 2427, 2726
BssT1I	CCWWGG	1 cut(s)	1425
Bst2BI	CACGAG	3 cut(s)	1082, 2427, 2726
Bst2UI	CCWGG	2 cut(s)	1232, 1977
Bst4CI	ACNGT	9 cut(s)	257, 344, 937, 1270, 1875, 2537, 2543, 2755, 2765
Bst6I	CTCTTC	4 cut(s)	249, 1207, 1976, 2655
BstACI	GRCGYC	2 cut(s)	497, 647
BstAPI	GCANNNNNTGC	2 cut(s)	1298, 2053
BstAUI	TGTACA	1 cut(s)	1951
BstC8I	GCNNGC	3 cut(s)	103, 465, 1290
BstEII	GGTNACC	1 cut(s)	1835
BstFNI	CGCG	2 cut(s)	74, 467
BstHHI	GCGC	1 cut(s)	76
BstMAI	GTCTC	7 cut(s)	233, 818, 1061, 1708, 1721, 2010, 2754
BstMCI	CGRYCG	1 cut(s)	312
BstNI	CCWGG	2 cut(s)	1232, 1977
BstNSI	RCATGY	1 cut(s)	996
BstPAI	GACNNNNGTC	1 cut(s)	2226
BstPI	GGTNACC	1 cut(s)	1835
BstSCI	CCNGG	7 cut(s)	159, 599, 1193, 1230, 1779, 1975, 2063
BstSLI	GKGCMC	3 cut(s)	480, 1200, 1786
BstUI	CGCG	2 cut(s)	74, 467
BstV2I	GAAGAC	1 cut(s)	992
BstX2I	RGATCY	5 cut(s)	421, 1597, 2112, 2359, 2584
BstYI	RGATCY	5 cut(s)	421, 1597, 2112, 2359, 2584
Bsu15I	ATCGAT	1 cut(s)	1912
Bsu36I	CCTNAGG	2 cut(s)	446, 2591
BsuRI	GGCC	6 cut(s)	414, 790, 1445, 1461, 2063, 2130
BsuTUI	ATCGAT	1 cut(s)	1912
BtgZI	GCGATG	1 cut(s)	990
BtsI	GCAGTG	1 cut(s)	891
BtsIMutI	CAGTG	5 cut(s)	891, 1388, 1880, 2124, 2751
BveI	ACCTGC	3 cut(s)	954, 1090, 2703
Cac8I	GCNNGC	3 cut(s)	103, 465, 1290
CfoI	GCGC	1 cut(s)	76
Cfr10I	RCCGGY	3 cut(s)	101, 262, 1513
Cfr13I	GGNCC	6 cut(s)	412, 943, 1443, 1798, 1917, 2062
ClaI	ATCGAT	1 cut(s)	1912
CseI	GACGC	1 cut(s)	655
Csp6I	GTAC	5 cut(s)	340, 604, 1161, 1952, 2605
CspAI	ACCGGT	1 cut(s)	1513
CviAII	CATG	9 cut(s)	43, 993, 1252, 1810, 1820, 1832, 2087, 2548, 2795
CviQI	GTAC	5 cut(s)	340, 604, 1161, 1952, 2605
DraI	TTTAAA	1 cut(s)	1372
EaeI	YGGCCR	2 cut(s)	1459, 2128
Eam1104I	CTCTTC	4 cut(s)	249, 1207, 1976, 2655
EarI	CTCTTC	4 cut(s)	249, 1207, 1976, 2655
EciI	GGCGGA	2 cut(s)	120, 454
Ecl136II	GAGCTC	1 cut(s)	1766
Eco130I	CCWWGG	1 cut(s)	1425
Eco147I	AGGCCT	1 cut(s)	790
Eco24I	GRGCYC	2 cut(s)	285, 1768
Eco31I	GGTCTC	1 cut(s)	1708
Eco32I	GATATC	1 cut(s)	864
Eco47I	GGWCC	3 cut(s)	943, 1798, 1917
Eco53kI	GAGCTC	1 cut(s)	1766
Eco57I	CTGAAG	1 cut(s)	1149
Eco81I	CCTNAGG	2 cut(s)	446, 2591
Eco88I	CYCGRG	1 cut(s)	236
Eco91I	GGTNACC	1 cut(s)	1835
EcoICRI	GAGCTC	1 cut(s)	1766
EcoO109I	RGGNCCY	1 cut(s)	412
EcoO65I	GGTNACC	1 cut(s)	1835
EcoRII	CCWGG	2 cut(s)	1230, 1975
EcoRV	GATATC	1 cut(s)	864
EcoT14I	CCWWGG	1 cut(s)	1425
EcoT22I	ATGCAT	3 cut(s)	1833, 2049, 2509
EcoT38I	GRGCYC	2 cut(s)	285, 1768
ErhI	CCWWGG	1 cut(s)	1425
FaeI	CATG	9 cut(s)	46, 996, 1255, 1813, 1823, 1835, 2090, 2551, 2798
FaqI	GGGAC	1 cut(s)	149
FatI	CATG	9 cut(s)	42, 992, 1251, 1809, 1819, 1831, 2086, 2547, 2794
FauNDI	CATATG	5 cut(s)	1143, 1959, 2209, 2251, 2464
FriOI	GRGCYC	2 cut(s)	285, 1768
GlaI	GCGC	1 cut(s)	75
HaeIII	GGCC	6 cut(s)	414, 790, 1445, 1461, 2063, 2130
HgaI	GACGC	1 cut(s)	655
HhaI	GCGC	1 cut(s)	76
Hin1I	GRCGYC	2 cut(s)	497, 647
Hin1II	CATG	9 cut(s)	46, 996, 1255, 1813, 1823, 1835, 2090, 2551, 2798
Hin6I	GCGC	1 cut(s)	74
HinP1I	GCGC	1 cut(s)	74
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	1 cut(s)	140
HphI	GGTGA	5 cut(s)	674, 731, 1282, 1325, 1847
Hpy166II	GTNNAC	4 cut(s)	166, 340, 478, 1025
Hpy8I	GTNNAC	4 cut(s)	166, 340, 478, 1025
Hpy99I	CGWCG	1 cut(s)	406
HpyCH4III	ACNGT	9 cut(s)	257, 344, 937, 1270, 1875, 2537, 2543, 2755, 2765
HpyCH4IV	ACGT	5 cut(s)	404, 497, 965, 2524, 2833
HpySE526I	ACGT	5 cut(s)	404, 497, 965, 2524, 2833
Hsp92I	GRCGYC	2 cut(s)	497, 647
Hsp92II	CATG	9 cut(s)	46, 996, 1255, 1813, 1823, 1835, 2090, 2551, 2798
HspAI	GCGC	1 cut(s)	74
Kpn2I	TCCGGA	1 cut(s)	86
KroI	GCCGGC	1 cut(s)	101
KroNI	GCCGGC	1 cut(s)	103
LguI	GCTCTTC	2 cut(s)	1976, 2655
LmnI	GCTCC	8 cut(s)	30, 89, 211, 391, 441, 1114, 1534, 1763
LweI	GCATC	9 cut(s)	733, 1019, 1024, 1263, 1341, 1366, 1887, 2273, 2516
MaeII	ACGT	5 cut(s)	404, 497, 965, 2524, 2833
MaeIII	GTNAC	5 cut(s)	662, 812, 1835, 2537, 2543
MfeI	CAATTG	1 cut(s)	1740
MflI	RGATCY	5 cut(s)	421, 1597, 2112, 2359, 2584
MhlI	GDGCHC	7 cut(s)	285, 480, 1200, 1583, 1768, 1786, 2413
MlsI	TGGCCA	2 cut(s)	1461, 2130
MluNI	TGGCCA	2 cut(s)	1461, 2130
MlyI	GAGTC	8 cut(s)	196, 235, 623, 635, 1888, 2171, 2216, 2738
MmeI	TCCRAC	4 cut(s)	1041, 1623, 1625, 1874
Mox20I	TGGCCA	2 cut(s)	1461, 2130
Mph1103I	ATGCAT	3 cut(s)	1833, 2049, 2509
MreI	CGCCGGCG	1 cut(s)	101
MroI	TCCGGA	1 cut(s)	86
MroNI	GCCGGC	1 cut(s)	101
MroXI	GAANNNNTTC	1 cut(s)	431
MscI	TGGCCA	2 cut(s)	1461, 2130
MseI	TTAA	7 cut(s)	78, 795, 1371, 2024, 2202, 2397, 2442
MslI	CAYNNNNRTG	3 cut(s)	1268, 1467, 2281
Msp20I	TGGCCA	2 cut(s)	1461, 2130
MspR9I	CCNGG	7 cut(s)	161, 601, 1195, 1232, 1781, 1977, 2065
MunI	CAATTG	1 cut(s)	1740
Mva1269I	GAATGC	1 cut(s)	2720
MvaI	CCWGG	2 cut(s)	1232, 1977
MvnI	CGCG	2 cut(s)	74, 467
NaeI	GCCGGC	1 cut(s)	103
NciI	CCSGG	5 cut(s)	161, 601, 1195, 1781, 2065
NdeI	CATATG	5 cut(s)	1143, 1959, 2209, 2251, 2464
NgoMIV	GCCGGC	1 cut(s)	101
NlaIII	CATG	9 cut(s)	46, 996, 1255, 1813, 1823, 1835, 2090, 2551, 2798
NlaIV	GGNNCC	6 cut(s)	207, 413, 423, 443, 1599, 1800
NmeAIII	GCCGAG	1 cut(s)	772
NmuCI	GTSAC	4 cut(s)	662, 1835, 2537, 2543
NsiI	ATGCAT	3 cut(s)	1833, 2049, 2509
NspI	RCATGY	1 cut(s)	996
OliI	CACNNNNGTG	1 cut(s)	1268
PaeR7I	CTCGAG	1 cut(s)	236
PaqCI	CACCTGC	1 cut(s)	1090
PasI	CCCWGGG	1 cut(s)	1976
PceI	AGGCCT	1 cut(s)	790
PciSI	GCTCTTC	2 cut(s)	1976, 2655
PctI	GAATGC	1 cut(s)	2720
PdiI	GCCGGC	1 cut(s)	103
PdmI	GAANNNNTTC	1 cut(s)	431
PfeI	GAWTC	7 cut(s)	172, 917, 998, 2068, 2234, 2240, 2345
PinAI	ACCGGT	1 cut(s)	1513
PleI	GAGTC	8 cut(s)	195, 235, 622, 634, 1887, 2170, 2216, 2737
PpsI	GAGTC	8 cut(s)	195, 235, 622, 634, 1887, 2170, 2216, 2737
PshAI	GACNNNNGTC	1 cut(s)	2226
Psp124BI	GAGCTC	1 cut(s)	1768
Psp1406I	AACGTT	1 cut(s)	2524
Psp6I	CCWGG	2 cut(s)	1230, 1975
PspEI	GGTNACC	1 cut(s)	1835
PspGI	CCWGG	2 cut(s)	1230, 1975
PspN4I	GGNNCC	6 cut(s)	207, 413, 423, 443, 1599, 1800
PspPI	GGNCC	6 cut(s)	412, 943, 1443, 1798, 1917, 2062
PsuI	RGATCY	5 cut(s)	421, 1597, 2112, 2359, 2584
RsaI	GTAC	5 cut(s)	341, 605, 1162, 1953, 2606
RsaNI	GTAC	5 cut(s)	340, 604, 1161, 1952, 2605
RseI	CAYNNNNRTG	3 cut(s)	1268, 1467, 2281
SacI	GAGCTC	1 cut(s)	1768
SapI	GCTCTTC	2 cut(s)	1976, 2655
SaqAI	TTAA	7 cut(s)	78, 795, 1371, 2024, 2202, 2397, 2442
Sau96I	GGNCC	6 cut(s)	412, 943, 1443, 1798, 1917, 2062
SchI	GAGTC	8 cut(s)	196, 235, 623, 635, 1888, 2171, 2216, 2738
ScrFI	CCNGG	7 cut(s)	161, 601, 1195, 1232, 1781, 1977, 2065
SduI	GDGCHC	7 cut(s)	285, 480, 1200, 1583, 1768, 1786, 2413
SfaNI	GCATC	9 cut(s)	733, 1019, 1024, 1263, 1341, 1366, 1887, 2273, 2516
Sfr274I	CTCGAG	1 cut(s)	236
SgrAI	CRCCGGYG	1 cut(s)	101
SinI	GGWCC	3 cut(s)	943, 1798, 1917
SlaI	CTCGAG	1 cut(s)	236
SmiMI	CAYNNNNRTG	3 cut(s)	1268, 1467, 2281
SmlI	CTYRAG	4 cut(s)	236, 278, 1355, 2224
SmoI	CTYRAG	4 cut(s)	236, 278, 1355, 2224
SseBI	AGGCCT	1 cut(s)	790
SstI	GAGCTC	1 cut(s)	1768
StuI	AGGCCT	1 cut(s)	790
StyD4I	CCNGG	7 cut(s)	159, 599, 1193, 1230, 1779, 1975, 2063
StyI	CCWWGG	1 cut(s)	1425
TaaI	ACNGT	9 cut(s)	257, 344, 937, 1270, 1875, 2537, 2543, 2755, 2765
TaiI	ACGT	5 cut(s)	407, 500, 968, 2527, 2836
TaqII	GACCGA	1 cut(s)	298
TatI	WGTACW	2 cut(s)	1160, 1951
TauI	GCSGC	3 cut(s)	101, 652, 1475
TfiI	GAWTC	7 cut(s)	172, 917, 998, 2068, 2234, 2240, 2345
Tru1I	TTAA	7 cut(s)	78, 795, 1371, 2024, 2202, 2397, 2442
Tru9I	TTAA	7 cut(s)	78, 795, 1371, 2024, 2202, 2397, 2442
TscAI	CASTG	5 cut(s)	891, 1388, 1880, 2131, 2758
TseFI	GTSAC	4 cut(s)	662, 1835, 2537, 2543
Tsp45I	GTSAC	4 cut(s)	662, 1835, 2537, 2543
TspDTI	ATGAA	5 cut(s)	1198, 1502, 1808, 2118, 2856
TspGWI	ACGGA	2 cut(s)	836, 2592
TspRI	CASTG	5 cut(s)	891, 1388, 1880, 2131, 2758
VneI	GTGCAC	1 cut(s)	476
VpaK11BI	GGWCC	3 cut(s)	943, 1798, 1917
XapI	RAATTY	2 cut(s)	844, 1367
XbaI	TCTAGA	2 cut(s)	1279, 2266
XceI	RCATGY	1 cut(s)	996
XhoI	CTCGAG	1 cut(s)	236
XmnI	GAANNNNTTC	1 cut(s)	431
ZraI	GACGTC	1 cut(s)	498
Zsp2I	ATGCAT	3 cut(s)	1833, 2049, 2509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.