Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0002635

Physical Location & Seq

Genomic Coordinates Forward (+)

25445969 .. 25451273

Gene Structure 5305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1162900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGCAGCATAATATATTTACAACAATGCGTAGCTTGAAGATCATGGATGGGTGTAAGGGAACTCAAGTTTTCGCGCTTAATCCTTCCGGAGACACCGCCGCCGCCGGAAACGGCGGTGGTGCTGGGGGTGTGGGGGACAAGCTTCTTCACCATTTCCGGGTCAACTCTATTCGATCCAGATCGAGTCGGGGCAGTTTTCAGGCTCCGAACCCGACCGCCAACAATGTTTTGCTCGAGACTCTTCTTCCATATGGTCTTCCGGTGTCGGATCTACTCGAGCCCCAAATCGAACCTTCCCTCAAATCGGTCGATTTTGTCGAAACCCTAGCTGATGTGTACCGTAGGATTGAGATTTGCCCCCAATTCGAGAAGTGGAAGATGTATTTGGAGCAATGTGCGACATTTCGGGGTCTGTCGGATCCAAAACTGTTCCGGCGGAGCCTCAGGTCAGCGAGGCAACACGCGGTGGATGTGCACTCGAAGGTGGTGCTAGCGGCGTGGTTGAGGTATGAGAGGAGAGAGGATGAGCTTATTGGGTCGTCATCAATGGATTGTTGTGGTAGAAATGTTGAATGTCCGAAGGCTAGTTTGGTTTCCGGGTATGATCCCGAGTCTGTTTTTGAGTCTTGTATGTGTTCTAGGACGCTGCGGGGGGAGGAGGACGATGATGATCTTGTGATGGGGGATGAGGTATGTTCCACTTCCGAGGAGGATGGTGATATTTCATTTTGTATTGGAGATGCTGAGATTAGGTGTGTTAGATACAACATTGCCTCGCTTTCTAGGCCTTTCAATGCAATGTTGTATGGTAACTTCACGGAGACGCGAAGGGAGAAGATAAATTTCACACAGAATGGGATATCTGTGGAGGCAATGAGGGCAGTCGAGATTTTTAGCAGGATAAAAAGAGTAGATTCTTTTGAAGTGAGAACTGTTTTGGACCTGCTATCCTTTGCAAACAGGTTTTGTTGCGATGAGTTGAAGTCGGTGTGTGATTCTCATTTGGCATCTTTGGTTTGTGAACTGGAAGATGCAATGCTGCTGATTGACTATGGATTGGAGGAGACTGCTCATCTTCTAGTGGCAGCTTGTTTGCAGGTGTTTTTGAGGGAGCTACCGAGTTCATTGCATAATCCTCATATGATGAGATTATTTTGTACTTCAGAAGCTAGGCAAAGGTTGGCTATGTCTGGGCACTCTTCTTTTGTTTTGTATTATTTGTTGAGCCAGATTGCTATTGAGGAAGACATGAGATCGAACACAACAGTGATGCTTCTAGAGAGGCTGGCAGAGTGTGCCACCGAAATTTGGCAGAAGCAACTTGCATTTCACCTGTTAGGTGTTGTGATGCTTGAGAGGAAAGAATTTAAAGATGCTCAGTGGTGGTTTGAAGAAGCAGTAGAGGTTGGTCATATTTATTCCTTGGTGGGCATTGCGAGGGCCAAGTTCAAGCGTGGCCATAAGTATGCAGCTTACAAGCAAATGAACTCTCTCATTTCTGATTATACACCGGTTGGGTGGATGTATCAGGAGCGATCTCTGTATTGTATTGGAAAGGAAAAGATGATGGATTTGAGCACAGCAACTCACTTGGATCCAACTCTATCTTATCCATACAAGTATAGGGCTGTTTCTTTGTTGGAGGAGAACCAGTTTGAAGCAGCTATCACAGAGATTAATAAGATAATTAGTTTCAAGGTCTCTCCTGATTGTCTTGAATTGCGGGCTTGGTTTTCAATTGCCCTTGAAGATTTTGAAGGAGCTCTCAGAGATGTCCGGGCACTCTTGACTTTGGACCCAAATTACATGATGTTTCATGGGAAAATGCATGGTGACCATCTGGTAGAGCTGCTCCACCCTCTTGTTCAACAGTGGAGTCAGGCTGATTGTTGGATGCAACTGTATGATCGATGGTCCTCTGTTGATGATATTGGTTCTCTAGCTGTTGTACATCATATGTTGGCAAATGACCCTGGGAAGAGCCTTCTACACTTTAGGCAGTCTCTCCTTCTGTTGCGGTTAAATTGTCAAAAGGCTGCTATGCATAGTCTTCGGTTGGCTCGGAATCATTCTAGTTCTGAGCATGAGCGGCTTGTCTATGAAGGATGGATCTTGTATGACACTGGCCATCGTGAAGAAGCATTGGCAAAGGCAGAGGAGTCCATTGCTATCCAGAGATCATTTGAAGCATTTTTCCTTAAAGCATATGCTTTAGCAGACTCAAGTCTTGATTCTGAGTCTTCAACATACGTGATCCAGCTTCTAGAGGAAGCGCTTAGATGCCCTTCGGATGGTCTTAGAAAAGGACAAGCTCTAAATAATTTAGGAAGCGTCTATGTAGACTCTGATAAGCTGGATCTTGCTGCCGACTGCTATACAAATGCACTCAACATTAAGCATACGAGAGCACATCAGGGTCTAGCACGAGTATATCATCTTAAAAATCAACGCAAGGCTGCATATGATGAGATGACAAAGCTGATAGAGAAGGCTCGAAACAATGCATCAGCTTATGAAAAACGTTCAGAATACTGTGACCGCGATATGGCAAAGAGTGATCTAAGTATGGCAACACAACTAGATCCCCTGAGGACATATCCGTACAGATATAGGGCAGCAGTTTTGATGGATGACCACAAAGAAGGAGAAGCCATTGAAGAGCTAACAAAGGCCATAACTTTCAAGCCAGACCTGCAGCTGCTACATCTTCGAGCAGCATTCCACGAGTCAATGGGTGACTTTGTCTCCACGGTGCGAGACTGTGAAGCAGCCCTGTGTCTTGATCCCAACCATGCTGACACTCATGACCTCTATGCTAAAGCACGGGAACGTGTCAATGAACAACAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB TPR_8

Protein Analysis

951

Amino Acids

108.06

Weight (kDa)

5.7

Isoelectric Point (pI)

46.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51770 AT3G51770
fragaria_vesca	FvH4_3g39300 FvH4_3g39300 FvH4_3g39300 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980 FvH4_6g10980
malus_domestica	MD03G1062500.v1.1 MD04G1162900.v1.1 MD11G1066100.v1.1 MD12G1176500.v1.1
prunus_persica	Prupe.6G052500_v2.0.a1 Prupe.6G052500_v2.0.a1 Prupe.6G282400_v2.0.a1
pyrus_communis	pycom03g05010 pycom11g05600 pycom12g16650
rosa_chinensis	RchiOBHm_Chr3g0462291 RchiOBHm_Chr5g0070731
rosa_laevigata	RLG00000024871 RLG00000036154
rosa_multiflora	Rmu_co8338553.1_g000001 Rmu_sc0002944.1_g000041 Rmu_sc0036080.1_g000002
rosa_roxburghii	Rroxscaffold_1G00010460 Rroxscaffold_6G00417610
rosa_rugosa	Rorug03G0055500 Rorug05G0408100 Rorug05G0408200
rosa_samantha	Rh3AG114300 Rh3BG117400 Rh3CG120200 Rh3DG119200 Rh5AG463600 Rh5CG505800 Rh5DG494000
rosa_wichuraiana	Rw3G009650 Rw5G043150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1087
Acc36I	ACCTGC	3 cut(s)	951, 1087, 2700
AccBSI	CCGCTC	1 cut(s)	2089
AccI	GTMKAC	1 cut(s)	2340
AccII	CGCG	4 cut(s)	74, 464, 826, 2541
AccIII	TCCGGA	1 cut(s)	86
AclI	AACGTT	1 cut(s)	2521
AcoI	YGGCCR	2 cut(s)	1456, 2125
AcsI	RAATTY	3 cut(s)	841, 1305, 1364
AcuI	CTGAAG	1 cut(s)	1146
AdeI	CACNNNGTG	1 cut(s)	466
AfaI	GTAC	4 cut(s)	338, 1159, 1950, 2603
AfeI	AGCGCT	1 cut(s)	2274
AfiI	CCNNNNNNNGG	5 cut(s)	157, 304, 1308, 2291, 2545
AflIII	ACRYGT	1 cut(s)	2830
AgeI	ACCGGT	1 cut(s)	1510
AjnI	CCWGG	1 cut(s)	1972
AjuI	GAANNNNNNNTTGG	4 cut(s)	368, 400, 572, 604
AleI	CACNNNNGTG	1 cut(s)	1265
Alw21I	GWGCWC	4 cut(s)	477, 1580, 1765, 2410
Alw26I	GTCTC	8 cut(s)	84, 230, 815, 1058, 1705, 2007, 2749, 2751
Alw44I	GTGCAC	1 cut(s)	473
Ama87I	CYCGRG	3 cut(s)	233, 275, 608
Aor13HI	TCCGGA	1 cut(s)	86
Aor51HI	AGCGCT	1 cut(s)	2274
AoxI	GGCC	5 cut(s)	785, 1440, 1456, 2125, 2670
ApaLI	GTGCAC	1 cut(s)	473
ApoI	RAATTY	3 cut(s)	841, 1305, 1364
AseI	ATTAAT	1 cut(s)	1677
AsiGI	ACCGGT	1 cut(s)	1510
AspLEI	GCGC	2 cut(s)	76, 2275
AspS9I	GGNCC	4 cut(s)	940, 1440, 1795, 1914
AsuC2I	CCSGG	3 cut(s)	158, 598, 1778
AsuHPI	GGTGA	5 cut(s)	140, 728, 1322, 1844, 2747
AsuNHI	GCTAGC	1 cut(s)	490
AvaI	CYCGRG	3 cut(s)	233, 275, 608
AvaII	GGWCC	3 cut(s)	940, 1795, 1914
AxyI	CCTNAGG	2 cut(s)	443, 2588
BaeGI	GKGCMC	3 cut(s)	477, 1197, 1783
BalI	TGGCCA	2 cut(s)	1458, 2127
BamHI	GGATCC	2 cut(s)	418, 1594
BanII	GRGCYC	2 cut(s)	282, 1765
BarI	GAAGNNNNNNTAC	2 cut(s)	797, 829
BauI	CACGAG	2 cut(s)	2424, 2723
BbsI	GAAGAC	4 cut(s)	248, 1251, 2042, 2232
Bbv12I	GWGCWC	4 cut(s)	477, 1580, 1765, 2410
BceAI	ACGGC	1 cut(s)	127
BcgI	CGANNNNNNTGC	6 cut(s)	469, 503, 1108, 1142, 2033, 2067
BciT130I	CCWGG	1 cut(s)	1974
BcnI	CCSGG	3 cut(s)	158, 598, 1778
BcoDI	GTCTC	8 cut(s)	84, 230, 815, 1058, 1705, 2007, 2749, 2751
BfmI	CTRYAG	1 cut(s)	2693
BfoI	RGCGCY	1 cut(s)	2276
BfuAI	ACCTGC	3 cut(s)	951, 1087, 2700
Bme1390I	CCNGG	4 cut(s)	158, 598, 1778, 1974
Bme18I	GGWCC	3 cut(s)	940, 1795, 1914
BmeT110I	CYCGRG	3 cut(s)	233, 275, 608
BmgT120I	GGNCC	4 cut(s)	940, 1440, 1795, 1914
BmiI	GGNNCC	5 cut(s)	204, 420, 440, 1596, 1797
BmrFI	CCNGG	4 cut(s)	158, 598, 1778, 1974
BmsI	GCATC	9 cut(s)	730, 1016, 1021, 1260, 1338, 1363, 1884, 2270, 2513
BmtI	GCTAGC	1 cut(s)	494
BoxI	GACNNNNGTC	1 cut(s)	2223
BpiI	GAAGAC	4 cut(s)	248, 1251, 2042, 2232
BpuEI	CTTGAG	3 cut(s)	48, 1373, 2206
BpuMI	CCSGG	3 cut(s)	158, 598, 1778
Bsa29I	ATCGAT	1 cut(s)	1909
BsaAI	YACGTR	1 cut(s)	2251
BsaBI	GATNNNNATC	2 cut(s)	178, 669
BsaI	GGTCTC	1 cut(s)	1705
BsaJI	CCNNGG	5 cut(s)	705, 1422, 1972, 1973, 2748
BsaWI	WCCGGW	3 cut(s)	86, 259, 1510
BsaXI	ACNNNNNCTCC	4 cut(s)	1637, 1667, 2729, 2759
Bsc4I	CCNNNNNNNGG	5 cut(s)	157, 304, 1308, 2291, 2545
Bse118I	RCCGGY	1 cut(s)	1510
Bse1I	ACTGG	3 cut(s)	1029, 1651, 2128
Bse21I	CCTNAGG	2 cut(s)	443, 2588
Bse3DI	GCAATG	8 cut(s)	398, 768, 804, 879, 1041, 1124, 1431, 2163
Bse8I	GATNNNNATC	2 cut(s)	178, 669
BseAI	TCCGGA	1 cut(s)	86
BseBI	CCWGG	1 cut(s)	1974
BseCI	ATCGAT	1 cut(s)	1909
BseDI	CCNNGG	5 cut(s)	705, 1422, 1972, 1973, 2748
BseJI	GATNNNNATC	2 cut(s)	178, 669
BseLI	CCNNNNNNNGG	5 cut(s)	157, 304, 1308, 2291, 2545
BseMI	GCAATG	8 cut(s)	398, 768, 804, 879, 1041, 1124, 1431, 2163
BseMII	CTCAG	7 cut(s)	457, 735, 1391, 1780, 2070, 2226, 2579
BseNI	ACTGG	3 cut(s)	1029, 1651, 2128
BseRI	GAGGAG	6 cut(s)	529, 671, 722, 1076, 1658, 2171
BseSI	GKGCMC	3 cut(s)	477, 1197, 1783
BseYI	CCCAGC	1 cut(s)	122
Bsh1236I	CGCG	4 cut(s)	74, 464, 826, 2541
Bsh1285I	CGRYCG	2 cut(s)	216, 309
BshFI	GGCC	5 cut(s)	787, 1442, 1458, 2127, 2672
BshTI	ACCGGT	1 cut(s)	1510
BshVI	ATCGAT	1 cut(s)	1909
BsiEI	CGRYCG	2 cut(s)	216, 309
BsiHKAI	GWGCWC	4 cut(s)	477, 1580, 1765, 2410
BsiHKCI	CYCGRG	3 cut(s)	233, 275, 608
BsiSI	CCGG	8 cut(s)	87, 105, 157, 260, 433, 597, 1511, 1777
BslFI	GGGAC	1 cut(s)	149
BslI	CCNNNNNNNGG	5 cut(s)	157, 304, 1308, 2291, 2545
BsmAI	GTCTC	8 cut(s)	84, 230, 815, 1058, 1705, 2007, 2749, 2751
BsmBI	CGTCTC	1 cut(s)	815
BsmFI	GGGAC	1 cut(s)	149
BsmI	GAATGC	1 cut(s)	2717
BsnI	GGCC	5 cut(s)	787, 1442, 1458, 2127, 2672
Bso31I	GGTCTC	1 cut(s)	1705
BsoBI	CYCGRG	3 cut(s)	233, 275, 608
Bsp1286I	GDGCHC	7 cut(s)	282, 477, 1197, 1580, 1765, 1783, 2410
Bsp13I	TCCGGA	1 cut(s)	86
Bsp1407I	TGTACA	1 cut(s)	1948
BspANI	GGCC	5 cut(s)	787, 1442, 1458, 2127, 2672
BspCNI	CTCAG	7 cut(s)	456, 736, 1390, 1779, 2071, 2227, 2580
BspDI	ATCGAT	1 cut(s)	1909
BspEI	TCCGGA	1 cut(s)	86
BspFNI	CGCG	4 cut(s)	74, 464, 826, 2541
BspHI	TCATGA	1 cut(s)	2803
BspLI	GGNNCC	5 cut(s)	204, 420, 440, 1596, 1797
BspMAI	CTGCAG	1 cut(s)	2697
BspMI	ACCTGC	3 cut(s)	951, 1087, 2700
BspOI	GCTAGC	1 cut(s)	494
BspQI	GCTCTTC	2 cut(s)	1973, 2652
BspTNI	GGTCTC	1 cut(s)	1705
BsrBI	CCGCTC	1 cut(s)	2089
BsrDI	GCAATG	8 cut(s)	398, 768, 804, 879, 1041, 1124, 1431, 2163
BsrFI	RCCGGY	1 cut(s)	1510
BsrGI	TGTACA	1 cut(s)	1948
BsrI	ACTGG	3 cut(s)	1029, 1651, 2128
BssAI	RCCGGY	1 cut(s)	1510
BssECI	CCNNGG	5 cut(s)	705, 1422, 1972, 1973, 2748
BssSI	CACGAG	2 cut(s)	2424, 2723
BssT1I	CCWWGG	1 cut(s)	1422
Bst2BI	CACGAG	2 cut(s)	2424, 2723
Bst2UI	CCWGG	1 cut(s)	1974
Bst4CI	ACNGT	9 cut(s)	341, 429, 934, 1267, 1872, 1902, 2534, 2752, 2762
Bst6I	CTCTTC	4 cut(s)	246, 1204, 1973, 2652
BstAPI	GCANNNNNTGC	1 cut(s)	1295
BstAUI	TGTACA	1 cut(s)	1948
BstBAI	YACGTR	1 cut(s)	2251
BstC8I	GCNNGC	3 cut(s)	492, 1287, 1725
BstDSI	CCRYGG	1 cut(s)	2748
BstEII	GGTNACC	1 cut(s)	1832
BstFNI	CGCG	4 cut(s)	74, 464, 826, 2541
BstH2I	RGCGCY	1 cut(s)	2276
BstHHI	GCGC	2 cut(s)	76, 2275
BstMAI	GTCTC	8 cut(s)	84, 230, 815, 1058, 1705, 2007, 2749, 2751
BstMCI	CGRYCG	2 cut(s)	216, 309
BstMWI	GCNNNNNNNGC	5 cut(s)	784, 878, 1295, 2089, 2692
BstNI	CCWGG	1 cut(s)	1974
BstPAI	GACNNNNGTC	1 cut(s)	2223
BstPI	GGTNACC	1 cut(s)	1832
BstSCI	CCNGG	4 cut(s)	156, 596, 1776, 1972
BstSFI	CTRYAG	1 cut(s)	2693
BstSLI	GKGCMC	3 cut(s)	477, 1197, 1783
BstUI	CGCG	4 cut(s)	74, 464, 826, 2541
BstV2I	GAAGAC	4 cut(s)	248, 1251, 2042, 2232
BstX2I	RGATCY	6 cut(s)	268, 418, 1594, 2109, 2356, 2581
BstYI	RGATCY	6 cut(s)	268, 418, 1594, 2109, 2356, 2581
Bsu15I	ATCGAT	1 cut(s)	1909
Bsu36I	CCTNAGG	2 cut(s)	443, 2588
BsuRI	GGCC	5 cut(s)	787, 1442, 1458, 2127, 2672
BsuTUI	ATCGAT	1 cut(s)	1909
BtgI	CCRYGG	1 cut(s)	2748
BtgZI	GCGATG	1 cut(s)	987
BtsIMutI	CAGTG	4 cut(s)	1272, 1385, 1877, 2121
BveI	ACCTGC	3 cut(s)	951, 1087, 2700
Cac8I	GCNNGC	3 cut(s)	492, 1287, 1725
CciI	TCATGA	1 cut(s)	2803
CfoI	GCGC	2 cut(s)	76, 2275
Cfr10I	RCCGGY	1 cut(s)	1510
Cfr13I	GGNCC	4 cut(s)	940, 1440, 1795, 1914
ClaI	ATCGAT	1 cut(s)	1909
CseI	GACGC	3 cut(s)	652, 832, 2320
Csp6I	GTAC	4 cut(s)	337, 1158, 1949, 2602
CspAI	ACCGGT	1 cut(s)	1510
CviAII	CATG	8 cut(s)	43, 1249, 1807, 1817, 1829, 2084, 2792, 2804
CviQI	GTAC	4 cut(s)	337, 1158, 1949, 2602
DraI	TTTAAA	1 cut(s)	1369
DraIII	CACNNNGTG	1 cut(s)	466
EaeI	YGGCCR	2 cut(s)	1456, 2125
Eam1104I	CTCTTC	4 cut(s)	246, 1204, 1973, 2652
EarI	CTCTTC	4 cut(s)	246, 1204, 1973, 2652
EciI	GGCGGA	1 cut(s)	451
Ecl136II	GAGCTC	1 cut(s)	1763
Eco130I	CCWWGG	1 cut(s)	1422
Eco147I	AGGCCT	1 cut(s)	787
Eco24I	GRGCYC	2 cut(s)	282, 1765
Eco31I	GGTCTC	1 cut(s)	1705
Eco32I	GATATC	1 cut(s)	861
Eco47I	GGWCC	3 cut(s)	940, 1795, 1914
Eco47III	AGCGCT	1 cut(s)	2274
Eco53kI	GAGCTC	1 cut(s)	1763
Eco57I	CTGAAG	1 cut(s)	1146
Eco81I	CCTNAGG	2 cut(s)	443, 2588
Eco88I	CYCGRG	3 cut(s)	233, 275, 608
Eco91I	GGTNACC	1 cut(s)	1832
EcoICRI	GAGCTC	1 cut(s)	1763
EcoO65I	GGTNACC	1 cut(s)	1832
EcoRII	CCWGG	1 cut(s)	1972
EcoRV	GATATC	1 cut(s)	861
EcoT14I	CCWWGG	1 cut(s)	1422
EcoT22I	ATGCAT	3 cut(s)	1830, 2046, 2506
EcoT38I	GRGCYC	2 cut(s)	282, 1765
ErhI	CCWWGG	1 cut(s)	1422
Esp3I	CGTCTC	1 cut(s)	815
FaeI	CATG	8 cut(s)	46, 1252, 1810, 1820, 1832, 2087, 2795, 2807
FaqI	GGGAC	1 cut(s)	149
FatI	CATG	8 cut(s)	42, 1248, 1806, 1816, 1828, 2083, 2791, 2803
FauI	CCCGC	2 cut(s)	642, 1716
FauNDI	CATATG	5 cut(s)	250, 1140, 1956, 2206, 2461
FblI	GTMKAC	1 cut(s)	2340
FriOI	GRGCYC	2 cut(s)	282, 1765
GlaI	GCGC	2 cut(s)	75, 2274
GsaI	CCCAGC	1 cut(s)	126
HaeII	RGCGCY	1 cut(s)	2276
HaeIII	GGCC	5 cut(s)	787, 1442, 1458, 2127, 2672
HapII	CCGG	8 cut(s)	87, 105, 157, 260, 433, 597, 1511, 1777
HgaI	GACGC	3 cut(s)	652, 832, 2320
HhaI	GCGC	2 cut(s)	76, 2275
Hin1II	CATG	8 cut(s)	46, 1252, 1810, 1820, 1832, 2087, 2795, 2807
Hin6I	GCGC	2 cut(s)	74, 2273
HinP1I	GCGC	2 cut(s)	74, 2273
HincII	GTYRAC	1 cut(s)	163
HindII	GTYRAC	1 cut(s)	163
HindIII	AAGCTT	1 cut(s)	140
HpaII	CCGG	8 cut(s)	87, 105, 157, 260, 433, 597, 1511, 1777
HphI	GGTGA	5 cut(s)	140, 728, 1322, 1844, 2747
Hpy166II	GTNNAC	5 cut(s)	163, 337, 475, 1022, 2341
Hpy8I	GTNNAC	5 cut(s)	163, 337, 475, 1022, 2341
HpyCH4III	ACNGT	9 cut(s)	341, 429, 934, 1267, 1872, 1902, 2534, 2752, 2762
HpyCH4IV	ACGT	3 cut(s)	2250, 2521, 2830
HpyF10VI	GCNNNNNNNGC	5 cut(s)	784, 878, 1295, 2089, 2692
HpySE526I	ACGT	3 cut(s)	2250, 2521, 2830
Hsp92II	CATG	8 cut(s)	46, 1252, 1810, 1820, 1832, 2087, 2795, 2807
HspAI	GCGC	2 cut(s)	74, 2273
Kpn2I	TCCGGA	1 cut(s)	86
LguI	GCTCTTC	2 cut(s)	1973, 2652
LmnI	GCTCC	7 cut(s)	208, 388, 438, 1111, 1531, 1760, 1857
LweI	GCATC	9 cut(s)	730, 1016, 1021, 1260, 1338, 1363, 1884, 2270, 2513
MaeII	ACGT	3 cut(s)	2250, 2521, 2830
MaeIII	GTNAC	4 cut(s)	809, 1832, 2534, 2735
MbiI	CCGCTC	1 cut(s)	2089
MfeI	CAATTG	1 cut(s)	1737
MflI	RGATCY	6 cut(s)	268, 418, 1594, 2109, 2356, 2581
MhlI	GDGCHC	7 cut(s)	282, 477, 1197, 1580, 1765, 1783, 2410
MlsI	TGGCCA	2 cut(s)	1458, 2127
MluNI	TGGCCA	2 cut(s)	1458, 2127
MmeI	TCCRAC	5 cut(s)	246, 396, 1620, 1622, 1871
Mox20I	TGGCCA	2 cut(s)	1458, 2127
Mph1103I	ATGCAT	3 cut(s)	1830, 2046, 2506
MroI	TCCGGA	1 cut(s)	86
MscI	TGGCCA	2 cut(s)	1458, 2127
MseI	TTAA	7 cut(s)	78, 1368, 1677, 2021, 2199, 2394, 2439
MslI	CAYNNNNRTG	2 cut(s)	1265, 1464
Msp20I	TGGCCA	2 cut(s)	1458, 2127
MspA1I	CMGCKG	1 cut(s)	2698
MspI	CCGG	8 cut(s)	87, 105, 157, 260, 433, 597, 1511, 1777
MspR9I	CCNGG	4 cut(s)	158, 598, 1778, 1974
MunI	CAATTG	1 cut(s)	1737
Mva1269I	GAATGC	1 cut(s)	2717
MvaI	CCWGG	1 cut(s)	1974
MvnI	CGCG	4 cut(s)	74, 464, 826, 2541
MwoI	GCNNNNNNNGC	5 cut(s)	784, 878, 1295, 2089, 2692
NciI	CCSGG	3 cut(s)	158, 598, 1778
NdeI	CATATG	5 cut(s)	250, 1140, 1956, 2206, 2461
NheI	GCTAGC	1 cut(s)	490
NlaIII	CATG	8 cut(s)	46, 1252, 1810, 1820, 1832, 2087, 2795, 2807
NlaIV	GGNNCC	5 cut(s)	204, 420, 440, 1596, 1797
NmuCI	GTSAC	3 cut(s)	1832, 2534, 2735
NsiI	ATGCAT	3 cut(s)	1830, 2046, 2506
OliI	CACNNNNGTG	1 cut(s)	1265
PaeR7I	CTCGAG	2 cut(s)	233, 275
PagI	TCATGA	1 cut(s)	2803
PaqCI	CACCTGC	1 cut(s)	1087
PasI	CCCWGGG	1 cut(s)	1973
PceI	AGGCCT	1 cut(s)	787
PciSI	GCTCTTC	2 cut(s)	1973, 2652
PcsI	WCGNNNNNNNCGW	1 cut(s)	315
PctI	GAATGC	1 cut(s)	2717
PfeI	GAWTC	4 cut(s)	914, 995, 2065, 2231
PflFI	GACNNNGTC	1 cut(s)	2741
PinAI	ACCGGT	1 cut(s)	1510
Ppu21I	YACGTR	1 cut(s)	2251
PshAI	GACNNNNGTC	1 cut(s)	2223
PshBI	ATTAAT	1 cut(s)	1677
Psp124BI	GAGCTC	1 cut(s)	1765
Psp1406I	AACGTT	1 cut(s)	2521
Psp6I	CCWGG	1 cut(s)	1972
PspEI	GGTNACC	1 cut(s)	1832
PspFI	CCCAGC	1 cut(s)	122
PspGI	CCWGG	1 cut(s)	1972
PspN4I	GGNNCC	5 cut(s)	204, 420, 440, 1596, 1797
PspPI	GGNCC	4 cut(s)	940, 1440, 1795, 1914
PspXI	VCTCGAGB	1 cut(s)	275
PstI	CTGCAG	1 cut(s)	2697
PsuI	RGATCY	6 cut(s)	268, 418, 1594, 2109, 2356, 2581
PsyI	GACNNNGTC	1 cut(s)	2741
PvuII	CAGCTG	1 cut(s)	2698
RsaI	GTAC	4 cut(s)	338, 1159, 1950, 2603
RsaNI	GTAC	4 cut(s)	337, 1158, 1949, 2602
RseI	CAYNNNNRTG	2 cut(s)	1265, 1464
SacI	GAGCTC	1 cut(s)	1765
SapI	GCTCTTC	2 cut(s)	1973, 2652
SaqAI	TTAA	7 cut(s)	78, 1368, 1677, 2021, 2199, 2394, 2439
Sau96I	GGNCC	4 cut(s)	940, 1440, 1795, 1914
ScrFI	CCNGG	4 cut(s)	158, 598, 1778, 1974
SduI	GDGCHC	7 cut(s)	282, 477, 1197, 1580, 1765, 1783, 2410
SfaNI	GCATC	9 cut(s)	730, 1016, 1021, 1260, 1338, 1363, 1884, 2270, 2513
SfcI	CTRYAG	1 cut(s)	2693
Sfr274I	CTCGAG	2 cut(s)	233, 275
SinI	GGWCC	3 cut(s)	940, 1795, 1914
SlaI	CTCGAG	2 cut(s)	233, 275
SmiMI	CAYNNNNRTG	2 cut(s)	1265, 1464
SmlI	CTYRAG	5 cut(s)	63, 233, 275, 1352, 2221
SmoI	CTYRAG	5 cut(s)	63, 233, 275, 1352, 2221
SseBI	AGGCCT	1 cut(s)	787
SstI	GAGCTC	1 cut(s)	1765
StuI	AGGCCT	1 cut(s)	787
StyD4I	CCNGG	4 cut(s)	156, 596, 1776, 1972
StyI	CCWWGG	1 cut(s)	1422
TaaI	ACNGT	9 cut(s)	341, 429, 934, 1267, 1872, 1902, 2534, 2752, 2762
TaiI	ACGT	3 cut(s)	2253, 2524, 2833
TaqII	GACCGA	1 cut(s)	295
TatI	WGTACW	2 cut(s)	1157, 1948
TauI	GCSGC	4 cut(s)	101, 104, 497, 2092
TfiI	GAWTC	4 cut(s)	914, 995, 2065, 2231
Tru1I	TTAA	7 cut(s)	78, 1368, 1677, 2021, 2199, 2394, 2439
Tru9I	TTAA	7 cut(s)	78, 1368, 1677, 2021, 2199, 2394, 2439
TscAI	CASTG	4 cut(s)	1272, 1385, 1877, 2128
TseFI	GTSAC	3 cut(s)	1832, 2534, 2735
Tsp45I	GTSAC	3 cut(s)	1832, 2534, 2735
TspDTI	ATGAA	7 cut(s)	714, 1113, 1499, 1805, 2115, 2529, 2853
TspGWI	ACGGA	2 cut(s)	833, 2589
TspRI	CASTG	4 cut(s)	1272, 1385, 1877, 2128
Tth111I	GACNNNGTC	1 cut(s)	2741
VneI	GTGCAC	1 cut(s)	473
VpaK11BI	GGWCC	3 cut(s)	940, 1795, 1914
VspI	ATTAAT	1 cut(s)	1677
XapI	RAATTY	3 cut(s)	841, 1305, 1364
XbaI	TCTAGA	2 cut(s)	1276, 2263
XhoI	CTCGAG	2 cut(s)	233, 275
XmiI	GTMKAC	1 cut(s)	2340
Zsp2I	ATGCAT	3 cut(s)	1830, 2046, 2506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.