pycom11g05600

Ethylene-overproduction protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0002635
Physical Location & Seq
Reverse (-)
4279461 .. 4283004
3544 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g05600.1

Sequence Viewer

Length: 2808 bp
ATGCAGAAGATTTATTGCCATTTAGATATGCGAGGTCTGAAATTTTTAGACCGGTTCACAAGCACACAAGTCCATGCTGTAAATCCCATAGAACCCTCCAATGGCAAATCTTATGGCGGTGTTTCGAGAGCTAAGTTTAATTCCCATCTGATTAAGTCTTTTGGGTCGAACTCAAAGCCCAAAAAGTCGAGCTCAATCTCTGTGGCTGAAGCTCTTCTGCTTCCCTATGGAGTCCCAGCTACTGACCTCCTTGAGCCCTCCATAGACCCCCACCTTAAGCCATCTGATTTCGTCGAAAACTTGGCTGACTTGTATCGCCGGTTGGAGGGGTGTTCCTCTCATTCTGAGAGGTCATTGTTGTGTGTTCAGCAGTACTCTCTGTTGGGTGGGCTTGGTGATCCCAAACTGCTTCGCCGGTGTCTCCGAGCTGCTCGACAGAATGCTGCTGATGTAAATGATAAGGTTGTGCTCTCGGCGTGGTTGAGGTTCGAGAGGAGGGAGGATGAGCTTGTGGGAATGGCTGCTTTGGATTGTGGTGGGCAAGTTCTTGAGTGTCCTAAGGTTGCGTTGGTAAGTGGGGTTGATCCGAATTTGGTTTCGGGTCATTGTCAATGTGGGGAAGACGCTGCAAAAGCTGTTAGCGTGCCATTTTTTGAGGGCAGTGAGTGGGTGGGTTTAGATGAGGAGGAAGGTGATGTTTCATTTTGTATAGGAGATGAAGAAATTTATTGTAGAAGGTGTAAAATTGCGTCACTTTCTAGCCCTTTTGAGGCTATGTTGTATGGATGTTTTAAAGAATCGAAAAAGGGTAGGATTGATCTTTCGGAAAATGGGATATCTGTAAAGGGAATGAGAGCTGTGGAAGTGTATAGTAGGACCAGGAGGTTAGACTTGTTCAGTCCCGAGATTGTTGTTGAGTTACTTTCGTTTGCGAATGGGTTCTGTTGTGAGGAGATGAAGTCTGCTTGTGATGCTTATTTAGCTTCACTGGTTGATAATGTCGATGATGCGTTACTTCTTCTTGAATACGGTTTGGAGGAGATGGCATATCTTCTTGTAGCTGCCTGCTTGCAGGTGCTGCTGAGAGAGCTCCCAAATTCTCTGCATAATCCAAAGGCGATGAAATTTCTTTGTAGCTCCAAGGTTAGGGAGAGATTGGCCATGGCAGGGTATGGTTTCTTATTGTATTATTTTTTAAGCCATGTGGCAATGGAGGAAAGTATGGTGTCAAACACAACTGTAATGTTATTAGAGAGGTTGGAAGAATGTGCAACACAGCGGTGGCAGAAGACGCTTGTGTTGCATCAGTTGGGTTGTGTTCTGCTCGAAAGAAGACAGTACAAGGATGCACAGTTTCGCTTTCTGGCTGCGGCTGAGACAGGTCATGTTTATTCTGTGGCTGGTGTTGCAAGGACGAAGTACAAACAGGGGCAACGGTATTCGGCGTACAAGTTGGTGAGCTCTATTATCAATGAGTATAAACCAGCGGGGTGGATGTACCAGGAGCGTGCCCTCTACAATATTGGGAAAGAGAAGATTTTGGATTTGAGCACTGCAACTGAATTAGATCCCACTCTTTCATTTCCATATAAATATAGAGCCGTTGCAAATTTTGAGGAGAAGCAAATTAGAGCAGCTATTTTGGAGATTGACAAAGTTGTTAGGTTCAAGTTGTCGCCCGACTGCATTGAATTGCGGGCTTGGTTCTTCATTGCACTTGAAGATTATGAAAGTGCTCTTAGAGATATTCGTGTTTTATTAACTTTAGAACCCAATTACATGTTGTTTCATGGAAAAGTTAGCGGGGATTACTTGGTGGGGCTTCTCAGCCTTCGGATTAAGCAATTGAGTGAAGCTGACTGCTGGATGCAACTATATGATCAATGGACCAAGTCTGTTGATGACATTGGATCTCTGGCTATCATACATCAGATGTTGGGACATAACCCTCAAAAAAGCCTCCTGCAGTTTCGTCAGTCTTTACTCCTTTTACGGTTAAATTGTCAGAAGGCTGCAATGTGCAGTTTGCGGTTGGCAAGAAATAATTCTGGCTCTGAGCATGAGAGGCTGGTTTATGAAGGGTGGATTTTATATGACACTGGGAATCGTGAAGAAGCTCTTGCAAAGGCGGAAAAGTCCATACACATTCAGAGGTCATTTGAAGCTTTTTTCCTTAAAGCGTATGCACTGGCAGATGCTAGCTTGGACTCTGAAGCATCATCTCATGTTATTCAACTGCTGGAGGAAGCTCTCAGGTGTCGTTCAGATGGCCTTCGTAAAGGACAAGCCCTAAATAACTTGGGGAGTATATATGTGGATTGTGGTAAGCTGGACAAGGCTGCGGACTGCTACAAGAGTGCTCTTGACATCAAGCATACAAGAGCTCATCAGGGGTTGGCGCGTGTTTATCATCTTAAGAATCAAAGGAAAGCTGCATATGATGAGATAACCAAGCTCATAGAGAAGGCACAAAGTAATGCATCAGCATACGAGAAACGGTCAGAGTACAGTGATCCCGAGATGGCAAAGAATGATCTCAATATGGCATCACAATTGGATCCATTAAGGACATACCCGTACAGATACAGGGCAGCAGTGCTGATGGATGAACAAAGAAAGACCGAAGCTATAGAAGAGCTTACAAGGGCCATATCTTTCAAGCCTGACTTGCAAATGCTTCATCTTCGAGCTGCATTTTATGAGTCCATCGGAGATTTAAGCTCTGCTCTCCGAGATTGTCAAGCAGCTCTCTGCATGAACCCCAACCACACAGACACTATCGAATTGTATAATCGAGCCAGGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB TPR_1 TPR_8

Protein Analysis

936

Amino Acids

105.56

Weight (kDa)

6.36

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_1 PF00515 762 - 792 3.7e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1063
Acc36I ACCTGC 1 cut(s) 1063
AccII CGCG 1 cut(s) 2401
AciI CCGC 9 cut(s) 117, 1279, 1370, 1487, 1696, 1803, 2029, 2129, 2342
AclWI GGATC 7 cut(s) 392, 578, 1562, 1918, 2507, 2552, 2565
AcoI YGGCCR 1 cut(s) 1158
AcsI RAATTY 6 cut(s) 41, 589, 723, 1096, 1124, 1609
AcuI CTGAAG 2 cut(s) 228, 2232
AfaI GTAC 7 cut(s) 374, 1340, 1421, 1448, 1499, 2507, 2579
AfiI CCNNNNNNNGG 5 cut(s) 101, 325, 769, 1146, 1167
AflII CTTAAG 2 cut(s) 275, 2414
AflIII ACRYGT 1 cut(s) 1779
AgeI ACCGGT 1 cut(s) 51
AgsI TTSAA 7 cut(s) 1025, 1669, 1691, 1721, 2162, 2234, 2659
AjnI CCWGG 3 cut(s) 878, 1500, 2798
AleI CACNNNNGTG 1 cut(s) 1279
Alw21I GWGCWC 8 cut(s) 194, 471, 1092, 1463, 1553, 1738, 2362, 2386
Alw26I GTCTC 2 cut(s) 425, 1370
AlwI GGATC 7 cut(s) 392, 578, 1562, 1918, 2507, 2552, 2565
AlwNI CAGNNNCTG 3 cut(s) 242, 1078, 2805
Ama87I CYCGRG 2 cut(s) 902, 2516
AoxI GGCC 3 cut(s) 1158, 2269, 2646
ApoI RAATTY 6 cut(s) 41, 589, 723, 1096, 1124, 1609
AsiGI ACCGGT 1 cut(s) 51
Asp700I GAANNNNTTC 3 cut(s) 213, 938, 2044
AspLEI GCGC 1 cut(s) 2401
AspS9I GGNCC 3 cut(s) 876, 1887, 2646
AsuHPI GGTGA 3 cut(s) 407, 704, 1468
AsuNHI GCTAGC 1 cut(s) 2198
AvaI CYCGRG 2 cut(s) 902, 2516
AvaII GGWCC 2 cut(s) 876, 1887
AxyI CCTNAGG 1 cut(s) 558
BaeGI GKGCMC 1 cut(s) 1513
BalI TGGCCA 1 cut(s) 1160
BamHI GGATCC 1 cut(s) 2557
BanII GRGCYC 5 cut(s) 194, 258, 1092, 1463, 2386
BbsI GAAGAC 3 cut(s) 627, 1295, 1339
Bbv12I GWGCWC 8 cut(s) 194, 471, 1092, 1463, 1553, 1738, 2362, 2386
BccI CCATC 7 cut(s) 153, 289, 1036, 2261, 2515, 2596, 2714
BceAI ACGGC 1 cut(s) 1586
BciT130I CCWGG 3 cut(s) 880, 1502, 2800
BclI TGATCA 1 cut(s) 1879
BcoDI GTCTC 2 cut(s) 425, 1370
BfaI CTAG 2 cut(s) 759, 2199
BfmI CTRYAG 2 cut(s) 1964, 2628
BfrI CTTAAG 2 cut(s) 275, 2414
BfuAI ACCTGC 1 cut(s) 1063
BmcAI AGTACT 1 cut(s) 374
Bme1390I CCNGG 3 cut(s) 880, 1502, 2800
Bme18I GGWCC 2 cut(s) 876, 1887
BmeT110I CYCGRG 2 cut(s) 902, 2516
BmgT120I GGNCC 3 cut(s) 876, 1887, 2646
BmiI GGNNCC 1 cut(s) 2559
BmrFI CCNGG 3 cut(s) 880, 1502, 2800
BmrI ACTGGG 1 cut(s) 2109
BmsI GCATC 9 cut(s) 961, 997, 1312, 1336, 1857, 2185, 2225, 2489, 2555
BmtI GCTAGC 1 cut(s) 2202
BmuI ACTGGG 1 cut(s) 2109
BpiI GAAGAC 3 cut(s) 627, 1295, 1339
BpmI CTGGAG 1 cut(s) 2261
BpuEI CTTGAG 2 cut(s) 272, 569
BsaJI CCNNGG 3 cut(s) 1140, 1161, 2799
BsaWI WCCGGW 1 cut(s) 51
BsaXI ACNNNNNCTCC 2 cut(s) 944, 974
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 325, 769, 1146, 1167
Bse118I RCCGGY 3 cut(s) 51, 318, 414
Bse1I ACTGG 3 cut(s) 993, 2104, 2193
Bse21I CCTNAGG 1 cut(s) 558
Bse3DI GCAATG 3 cut(s) 1215, 1710, 2022
BseBI CCWGG 3 cut(s) 880, 1502, 2800
BseDI CCNNGG 3 cut(s) 1140, 1161, 2799
BseGI GGATG 6 cut(s) 508, 791, 1351, 1500, 1872, 2611
BseLI CCNNNNNNNGG 5 cut(s) 101, 325, 769, 1146, 1167
BseMI GCAATG 3 cut(s) 1215, 1710, 2022
BseMII CTCAG 6 cut(s) 336, 1073, 1365, 1840, 2046, 2266
BseNI ACTGG 3 cut(s) 993, 2104, 2193
BseRI GAGGAG 5 cut(s) 508, 698, 965, 1052, 1631
BseSI GKGCMC 1 cut(s) 1513
BseYI CCCAGC 1 cut(s) 235
BsgI GTGCAG 1 cut(s) 2041
Bsh1236I CGCG 1 cut(s) 2401
BshFI GGCC 3 cut(s) 1160, 2271, 2648
BshTI ACCGGT 1 cut(s) 51
BsiHKAI GWGCWC 8 cut(s) 194, 471, 1092, 1463, 1553, 1738, 2362, 2386
BsiHKCI CYCGRG 2 cut(s) 902, 2516
BsiSI CCGG 3 cut(s) 52, 319, 415
BslFI GGGAC 3 cut(s) 218, 885, 1953
BslI CCNNNNNNNGG 5 cut(s) 101, 325, 769, 1146, 1167
BsmAI GTCTC 2 cut(s) 425, 1370
BsmFI GGGAC 3 cut(s) 218, 885, 1953
BsmI GAATGC 1 cut(s) 445
BsnI GGCC 3 cut(s) 1160, 2271, 2648
BsoBI CYCGRG 2 cut(s) 902, 2516
Bsp143I GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
Bsp19I CCATGG 1 cut(s) 1161
BspACI CCGC 9 cut(s) 117, 1279, 1370, 1487, 1696, 1803, 2029, 2129, 2342
BspANI GGCC 3 cut(s) 1160, 2271, 2648
BspCNI CTCAG 6 cut(s) 337, 1074, 1366, 1839, 2047, 2265
BspFNI CGCG 1 cut(s) 2401
BspLI GGNNCC 1 cut(s) 2559
BspMAI CTGCAG 1 cut(s) 1968
BspMI ACCTGC 1 cut(s) 1063
BspOI GCTAGC 1 cut(s) 2202
BspPI GGATC 7 cut(s) 392, 578, 1562, 1918, 2507, 2552, 2565
BspQI GCTCTTC 2 cut(s) 219, 2628
BspTI CTTAAG 2 cut(s) 275, 2414
BsrDI GCAATG 3 cut(s) 1215, 1710, 2022
BsrFI RCCGGY 3 cut(s) 51, 318, 414
BsrI ACTGG 3 cut(s) 993, 2104, 2193
BssAI RCCGGY 3 cut(s) 51, 318, 414
BssECI CCNNGG 3 cut(s) 1140, 1161, 2799
BssMI GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
BssT1I CCWWGG 2 cut(s) 1140, 1161
Bst2UI CCWGG 3 cut(s) 880, 1502, 2800
Bst4CI ACNGT 8 cut(s) 1031, 1240, 1338, 1353, 1437, 1995, 2499, 2510
Bst6I CTCTTC 2 cut(s) 219, 2628
BstAFI CTTAAG 2 cut(s) 275, 2414
BstAPI GCANNNNNTGC 1 cut(s) 1078
BstC8I GCNNGC 6 cut(s) 644, 1066, 1070, 1509, 1698, 2200
BstDEI CTNAG 9 cut(s) 132, 345, 558, 1082, 1374, 1739, 1826, 2055, 2252
BstDSI CCRYGG 1 cut(s) 1161
BstF5I GGATG 6 cut(s) 508, 791, 1351, 1500, 1872, 2611
BstFNI CGCG 1 cut(s) 2401
BstHHI GCGC 1 cut(s) 2401
BstKTI GATC 9 cut(s) 400, 586, 820, 1570, 1882, 1913, 2515, 2536, 2560
BstMAI GTCTC 2 cut(s) 425, 1370
BstMBI GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
BstNI CCWGG 3 cut(s) 880, 1502, 2800
BstNSI RCATGY 1 cut(s) 1783
BstSCI CCNGG 3 cut(s) 878, 1500, 2798
BstSFI CTRYAG 2 cut(s) 1964, 2628
BstSLI GKGCMC 1 cut(s) 1513
BstUI CGCG 1 cut(s) 2401
BstV2I GAAGAC 3 cut(s) 627, 1295, 1339
BstX2I RGATCY 3 cut(s) 1567, 1910, 2557
BstXI CCANNNNNNTGG 1 cut(s) 1491
BstYI RGATCY 3 cut(s) 1567, 1910, 2557
Bsu36I CCTNAGG 1 cut(s) 558
BsuRI GGCC 3 cut(s) 1160, 2271, 2648
BtgI CCRYGG 1 cut(s) 1161
BtgZI GCGATG 1 cut(s) 1133
BtsCI GGATG 6 cut(s) 508, 791, 1351, 1500, 1872, 2611
BtsI GCAGTG 3 cut(s) 667, 1551, 2601
BtsIMutI CAGTG 7 cut(s) 667, 986, 1551, 2097, 2186, 2515, 2601
BveI ACCTGC 1 cut(s) 1063
Cac8I GCNNGC 6 cut(s) 644, 1066, 1070, 1509, 1698, 2200
CaiI CAGNNNCTG 3 cut(s) 242, 1078, 2805
CfoI GCGC 1 cut(s) 2401
Cfr10I RCCGGY 3 cut(s) 51, 318, 414
Cfr13I GGNCC 3 cut(s) 876, 1887, 2646
CseI GACGC 3 cut(s) 632, 738, 1300
Csp6I GTAC 7 cut(s) 373, 1339, 1420, 1447, 1498, 2506, 2578
CspAI ACCGGT 1 cut(s) 51
CspCI CAANNNNNGTGG 2 cut(s) 183, 218
CviAII CATG 9 cut(s) 74, 1162, 1202, 1385, 1780, 1790, 2060, 2225, 2755
CviQI GTAC 7 cut(s) 373, 1339, 1420, 1447, 1498, 2506, 2578
DdeI CTNAG 9 cut(s) 132, 345, 558, 1082, 1374, 1739, 1826, 2055, 2252
DpnI GATC 9 cut(s) 399, 585, 819, 1569, 1881, 1912, 2514, 2535, 2559
DpnII GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
DraI TTTAAA 1 cut(s) 793
EaeI YGGCCR 1 cut(s) 1158
Eam1104I CTCTTC 2 cut(s) 219, 2628
EarI CTCTTC 2 cut(s) 219, 2628
EciI GGCGGA 1 cut(s) 2144
Ecl136II GAGCTC 4 cut(s) 192, 1090, 1461, 2384
Eco130I CCWWGG 2 cut(s) 1140, 1161
Eco24I GRGCYC 5 cut(s) 194, 258, 1092, 1463, 2386
Eco32I GATATC 1 cut(s) 837
Eco47I GGWCC 2 cut(s) 876, 1887
Eco53kI GAGCTC 4 cut(s) 192, 1090, 1461, 2384
Eco57I CTGAAG 2 cut(s) 228, 2232
Eco81I CCTNAGG 1 cut(s) 558
Eco88I CYCGRG 2 cut(s) 902, 2516
EcoICRI GAGCTC 4 cut(s) 192, 1090, 1461, 2384
EcoRII CCWGG 3 cut(s) 878, 1500, 2798
EcoRV GATATC 1 cut(s) 837
EcoT14I CCWWGG 2 cut(s) 1140, 1161
EcoT22I ATGCAT 1 cut(s) 2482
EcoT38I GRGCYC 5 cut(s) 194, 258, 1092, 1463, 2386
ErhI CCWWGG 2 cut(s) 1140, 1161
FaeI CATG 9 cut(s) 77, 1165, 1205, 1388, 1783, 1793, 2063, 2228, 2758
FalI AAGNNNNNCTT 4 cut(s) 2103, 2135, 2651, 2683
FaqI GGGAC 3 cut(s) 218, 885, 1953
FatI CATG 9 cut(s) 73, 1161, 1201, 1384, 1779, 1789, 2059, 2224, 2754
FauI CCCGC 3 cut(s) 1480, 1689, 1796
FauNDI CATATG 1 cut(s) 2437
FbaI TGATCA 1 cut(s) 1879
FokI GGATG 6 cut(s) 515, 798, 1358, 1507, 1879, 2618
FriOI GRGCYC 5 cut(s) 194, 258, 1092, 1463, 2386
FspBI CTAG 2 cut(s) 759, 2199
GlaI GCGC 1 cut(s) 2400
GsaI CCCAGC 1 cut(s) 239
GsuI CTGGAG 1 cut(s) 2261
HaeIII GGCC 3 cut(s) 1160, 2271, 2648
HapII CCGG 3 cut(s) 52, 319, 415
HgaI GACGC 3 cut(s) 632, 738, 1300
HhaI GCGC 1 cut(s) 2401
Hin1II CATG 9 cut(s) 77, 1165, 1205, 1388, 1783, 1793, 2063, 2228, 2758
Hin6I GCGC 1 cut(s) 2399
HinP1I GCGC 1 cut(s) 2399
HindIII AAGCTT 1 cut(s) 2163
HinfI GANTC 6 cut(s) 231, 797, 2104, 2207, 2419, 2702
HpaII CCGG 3 cut(s) 52, 319, 415
HphI GGTGA 3 cut(s) 407, 704, 1468
Hpy166II GTNNAC 1 cut(s) 57
Hpy188III TCNNGA 8 cut(s) 126, 490, 548, 902, 1022, 2108, 2363, 2516
Hpy8I GTNNAC 1 cut(s) 57
Hpy99I CGWCG 1 cut(s) 296
HpyAV CCTTC 7 cut(s) 683, 729, 1841, 2002, 2072, 2282, 2458
HpyCH4III ACNGT 8 cut(s) 1031, 1240, 1338, 1353, 1437, 1995, 2499, 2510
HpyF3I CTNAG 9 cut(s) 132, 345, 558, 1082, 1374, 1739, 1826, 2055, 2252
Hsp92II CATG 9 cut(s) 77, 1165, 1205, 1388, 1783, 1793, 2063, 2228, 2758
HspAI GCGC 1 cut(s) 2399
Ksp22I TGATCA 1 cut(s) 1879
Kzo9I GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
LguI GCTCTTC 2 cut(s) 219, 2628
LmnI GCTCC 3 cut(s) 1095, 1142, 1504
LweI GCATC 9 cut(s) 961, 997, 1312, 1336, 1857, 2185, 2225, 2489, 2555
MaeI CTAG 2 cut(s) 759, 2199
MaeIII GTNAC 3 cut(s) 750, 918, 1011
MalI GATC 9 cut(s) 399, 585, 819, 1569, 1881, 1912, 2514, 2535, 2559
MboI GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
MfeI CAATTG 2 cut(s) 1844, 2552
MflI RGATCY 3 cut(s) 1567, 1910, 2557
MlsI TGGCCA 1 cut(s) 1160
MluNI TGGCCA 1 cut(s) 1160
MlyI GAGTC 3 cut(s) 240, 2201, 2711
MmeI TCCRAC 2 cut(s) 303, 1239
Mox20I TGGCCA 1 cut(s) 1160
Mph1103I ATGCAT 1 cut(s) 2482
MroXI GAANNNNTTC 3 cut(s) 213, 938, 2044
MscI TGGCCA 1 cut(s) 1160
MslI CAYNNNNRTG 2 cut(s) 358, 1279
Msp20I TGGCCA 1 cut(s) 1160
MspA1I CMGCKG 2 cut(s) 1279, 1487
MspCI CTTAAG 2 cut(s) 275, 2414
MspI CCGG 3 cut(s) 52, 319, 415
MspR9I CCNGG 3 cut(s) 880, 1502, 2800
MunI CAATTG 2 cut(s) 1844, 2552
Mva1269I GAATGC 1 cut(s) 445
MvaI CCWGG 3 cut(s) 880, 1502, 2800
MvnI CGCG 1 cut(s) 2401
NcoI CCATGG 1 cut(s) 1161
NdeI CATATG 1 cut(s) 2437
NdeII GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
NheI GCTAGC 1 cut(s) 2198
NlaIII CATG 9 cut(s) 77, 1165, 1205, 1388, 1783, 1793, 2063, 2228, 2758
NlaIV GGNNCC 1 cut(s) 2559
NmeAIII GCCGAG 1 cut(s) 452
NmuCI GTSAC 1 cut(s) 750
NsiI ATGCAT 1 cut(s) 2482
NspI RCATGY 1 cut(s) 1783
OliI CACNNNNGTG 1 cut(s) 1279
PaqCI CACCTGC 1 cut(s) 1063
PciI ACATGT 1 cut(s) 1779
PciSI GCTCTTC 2 cut(s) 219, 2628
PctI GAATGC 1 cut(s) 445
PdmI GAANNNNTTC 3 cut(s) 213, 938, 2044
PfeI GAWTC 3 cut(s) 797, 2104, 2419
PflFI GACNNNGTC 1 cut(s) 1891
PinAI ACCGGT 1 cut(s) 51
PleI GAGTC 3 cut(s) 239, 2201, 2710
PpsI GAGTC 3 cut(s) 239, 2201, 2710
PscI ACATGT 1 cut(s) 1779
Psp124BI GAGCTC 4 cut(s) 194, 1092, 1463, 2386
Psp6I CCWGG 3 cut(s) 878, 1500, 2798
PspFI CCCAGC 1 cut(s) 235
PspGI CCWGG 3 cut(s) 878, 1500, 2798
PspN4I GGNNCC 1 cut(s) 2559
PspPI GGNCC 3 cut(s) 876, 1887, 2646
PstI CTGCAG 1 cut(s) 1968
PstNI CAGNNNCTG 3 cut(s) 242, 1078, 2805
PsuI RGATCY 3 cut(s) 1567, 1910, 2557
PsyI GACNNNGTC 1 cut(s) 1891
RsaI GTAC 7 cut(s) 374, 1340, 1421, 1448, 1499, 2507, 2579
RsaNI GTAC 7 cut(s) 373, 1339, 1420, 1447, 1498, 2506, 2578
RseI CAYNNNNRTG 2 cut(s) 358, 1279
SacI GAGCTC 4 cut(s) 194, 1092, 1463, 2386
SapI GCTCTTC 2 cut(s) 219, 2628
Sau3AI GATC 9 cut(s) 397, 583, 817, 1567, 1879, 1910, 2512, 2533, 2557
Sau96I GGNCC 3 cut(s) 876, 1887, 2646
ScaI AGTACT 1 cut(s) 374
SchI GAGTC 3 cut(s) 240, 2201, 2711
ScrFI CCNGG 3 cut(s) 880, 1502, 2800
SfaNI GCATC 9 cut(s) 961, 997, 1312, 1336, 1857, 2185, 2225, 2489, 2555
SfcI CTRYAG 2 cut(s) 1964, 2628
SgrAI CRCCGGYG 1 cut(s) 414
SinI GGWCC 2 cut(s) 876, 1887
SmiMI CAYNNNNRTG 2 cut(s) 358, 1279
SmlI CTYRAG 4 cut(s) 251, 275, 548, 2414
SmoI CTYRAG 4 cut(s) 251, 275, 548, 2414
SsiI CCGC 9 cut(s) 117, 1279, 1370, 1487, 1696, 1803, 2029, 2129, 2342
SspI AATATT 1 cut(s) 1522
SspMI CTAG 2 cut(s) 759, 2199
SstI GAGCTC 4 cut(s) 194, 1092, 1463, 2386
StyD4I CCNGG 3 cut(s) 878, 1500, 2798
StyI CCWWGG 2 cut(s) 1140, 1161
TaaI ACNGT 8 cut(s) 1031, 1240, 1338, 1353, 1437, 1995, 2499, 2510
TaqII GACCGA 1 cut(s) 2636
TatI WGTACW 4 cut(s) 372, 1338, 1419, 2505
TauI GCSGC 1 cut(s) 1373
TfiI GAWTC 3 cut(s) 797, 2104, 2419
TscAI CASTG 7 cut(s) 667, 993, 1558, 2104, 2193, 2515, 2601
TseFI GTSAC 1 cut(s) 750
Tsp45I GTSAC 1 cut(s) 750
TspRI CASTG 7 cut(s) 667, 993, 1558, 2104, 2193, 2515, 2601
Tth111I GACNNNGTC 1 cut(s) 1891
Vha464I CTTAAG 2 cut(s) 275, 2414
VpaK11BI GGWCC 2 cut(s) 876, 1887
XapI RAATTY 6 cut(s) 41, 589, 723, 1096, 1124, 1609
XceI RCATGY 1 cut(s) 1783
XmnI GAANNNNTTC 3 cut(s) 213, 938, 2044
XspI CTAG 2 cut(s) 759, 2199
ZrmI AGTACT 1 cut(s) 374
Zsp2I ATGCAT 1 cut(s) 2482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.