Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0012841

Physical Location & Seq

Genomic Coordinates Forward (+)

10402815 .. 10405866

Gene Structure 3052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1116400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1122 bp

ATGGGTAATTTTGGAAGCACCACCTCCGGGGGTCGCCGGAGGCACCGCCCGCAACCCCAAATGTCTGGGGGTACTCATGTTTTTGCTGCTTCCACACCACCTCATCCGTCTCAATATCCGAACGGACCAGACTCCAATCCGCCGCAATACCATCAGAACCCGTCTCAATATACAAATGGATCAAACCCCAATCCGCCCCAGTTCCTCCAATACCCCAGATTCTACCTGCCGCCGCCTGTGCCGGTACCGTATCCGCAGTCTTTTCACGGCAGCGGAGTCTATATGGGCCCCACTCCCGCCAATTGGGTTCACGGGCAGTTCCCTTTCGGTGCTGCTCCCCCTGCCCCTCCCCCTCAGGGTGCTCCCTTTGTGGAACATCAGAAGACGATCACCATTAAGAATGCCGTGAATATCAAGAAAGACTCTTTGCGGGTAGAGCCGGATGAGGAGAATCCCGGGAGGTTCCTTGTTGCTTTCACGTTTGATGCTGCTGCGCCCGGAAGCATTACAGTTCTTTTTTTCGCTAAAGAAGATGCAGACTGTAAACTGATAGCAACAAAGGAAAGCTTGCTTAAATCTGTTACAGTGCCTTTTGAGAAAGGCCTTGGTCAAAAGTTTAGACAACCCTCTGGAACTGGGATTGACTTCTCAGTGTTTGAGGACATAGGGTTAAGTAAAGAGGGTGACATAGAAGTCTATCCTCTTGTGGTGAAGGCTGAATGCTGTCCCTTGAATGAAAGTGAGCAGGAATTGGTTGGAAATTCAGCTAGGAATTCTCAGATCACCCAGGCGGTGTTTGAAAAGAAGGACAATGGGGAATACAGAGTGCGGGTGATGAAGCAGATACTATGGGTGAATGGTATGAGGTACGAGCTACAGGAGATCTATGGTATTGGGAATTCGCTTGAAAGTGATCAAAGTGGAAATGATTCTGGCAAAGAATGTATAATTTGCTTGTCAGAGCCTCGAGATACAACTGTCCTCCCATGCCGGCACATGTGCATGTGCAGCGGTTGTGCTAAGGTTCTGAGGTTCCAGACAAATAGATGCCCCGTCTGTAGGCAACCAGTGGATCGTCTCTTGGAAATCAAGGTGAACAATGGAGCTGATAGTTCAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0008277 GO:0008589 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0023057 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0043949 GO:0043951 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045744 GO:0045879 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

374

Amino Acids

41.04

Weight (kDa)

6.47

Isoelectric Point (pI)

52.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNF157-like_N	PF26192	136 - 292	7.5e-69	RNF157-like N-terminal domain
zf-C3HC4_3	PF13920	313 - 359	4.8e-16	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	314 - 354	1.8e-06	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53410
fragaria_vesca	FvH4_3g32531 FvH4_3g32531
malus_domestica	MD03G1116400.v1.1 MD11G1134600.v1.1
prunus_persica	Prupe.6G100500_v2.0.a1
pyrus_communis	pycom11g11170
rosa_chinensis	RchiOBHm_Chr5g0059601
rosa_laevigata	RLG00000035307 RLG00000035309
rosa_multiflora	Rmu_ssc0000488.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021010
rosa_rugosa	Rorug05G0323600
rosa_samantha	Rh5AG388600 Rh5BG400200 Rh5CG424500 Rh5DG416500
rosa_wichuraiana	Rw5G036590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	692
Acc36I	ACCTGC	1 cut(s)	234
Acc65I	GGTACC	1 cut(s)	244
AccB1I	GGYRCC	2 cut(s)	42, 244
AclWI	GGATC	2 cut(s)	187, 1080
AcsI	RAATTY	3 cut(s)	760, 772, 898
AfaI	GTAC	3 cut(s)	73, 246, 869
AfiI	CCNNNNNNNGG	4 cut(s)	27, 303, 356, 1059
AflIII	ACRYGT	1 cut(s)	996
AgsI	TTSAA	3 cut(s)	733, 800, 908
AjnI	CCWGG	1 cut(s)	786
AluBI	AGCT	4 cut(s)	567, 767, 874, 1106
AluI	AGCT	4 cut(s)	567, 767, 874, 1106
Alw21I	GWGCWC	1 cut(s)	364
Alw26I	GTCTC	3 cut(s)	114, 168, 1082
AlwI	GGATC	2 cut(s)	187, 1080
Ama87I	CYCGRG	2 cut(s)	455, 966
AoxI	GGCC	2 cut(s)	286, 601
ApaI	GGGCCC	1 cut(s)	290
ApeKI	GCWGC	6 cut(s)	86, 270, 332, 488, 491, 1008
ApoI	RAATTY	3 cut(s)	760, 772, 898
Asp700I	GAANNNNTTC	1 cut(s)	928
Asp718I	GGTACC	1 cut(s)	244
AspLEI	GCGC	1 cut(s)	496
AspS9I	GGNCC	3 cut(s)	125, 286, 287
AsuC2I	CCSGG	4 cut(s)	28, 456, 457, 498
AsuHPI	GGTGA	7 cut(s)	382, 695, 721, 775, 844, 865, 1105
AvaI	CYCGRG	2 cut(s)	455, 966
AvaII	GGWCC	1 cut(s)	125
AxyI	CCTNAGG	1 cut(s)	354
BaeGI	GKGCMC	1 cut(s)	290
BaeI	ACNNNNGTAYC	4 cut(s)	63, 96, 963, 996
BanI	GGYRCC	2 cut(s)	42, 244
BanII	GRGCYC	1 cut(s)	290
BbsI	GAAGAC	1 cut(s)	389
Bbv12I	GWGCWC	1 cut(s)	364
BbvI	GCAGC	6 cut(s)	73, 282, 319, 475, 478, 1020
BccI	CCATC	1 cut(s)	159
BceAI	ACGGC	2 cut(s)	283, 389
BciT130I	CCWGG	1 cut(s)	788
BciVI	GTATCC	1 cut(s)	261
BclI	TGATCA	1 cut(s)	913
BcnI	CCSGG	4 cut(s)	28, 456, 457, 498
BcoDI	GTCTC	3 cut(s)	114, 168, 1082
BfaI	CTAG	1 cut(s)	768
BfmI	CTRYAG	2 cut(s)	875, 1057
BfuAI	ACCTGC	1 cut(s)	234
BfuI	GTATCC	1 cut(s)	261
BglII	AGATCT	1 cut(s)	882
BisI	GCNGC	9 cut(s)	87, 143, 230, 233, 271, 333, 489, 492, 1009
BlsI	GCNGC	9 cut(s)	88, 144, 231, 234, 272, 334, 490, 493, 1010
Bme1390I	CCNGG	5 cut(s)	28, 456, 457, 498, 788
Bme18I	GGWCC	1 cut(s)	125
BmeT110I	CYCGRG	2 cut(s)	455, 966
BmgT120I	GGNCC	3 cut(s)	125, 286, 287
BmiI	GGNNCC	6 cut(s)	44, 246, 288, 289, 464, 1034
BmrFI	CCNGG	5 cut(s)	28, 456, 457, 498, 788
BmrI	ACTGGG	2 cut(s)	193, 645
BmsI	GCATC	3 cut(s)	475, 523, 1037
BmuI	ACTGGG	2 cut(s)	193, 645
BpiI	GAAGAC	1 cut(s)	389
Bpu10I	CCTNAGC	1 cut(s)	1020
BpuMI	CCSGG	4 cut(s)	28, 456, 457, 498
BsaJI	CCNNGG	4 cut(s)	27, 455, 604, 786
Bsc4I	CCNNNNNNNGG	4 cut(s)	27, 303, 356, 1059
Bse118I	RCCGGY	2 cut(s)	241, 990
Bse1I	ACTGG	3 cut(s)	199, 640, 1067
Bse21I	CCTNAGG	1 cut(s)	354
BseBI	CCWGG	1 cut(s)	788
BseDI	CCNNGG	4 cut(s)	27, 455, 604, 786
BseGI	GGATG	2 cut(s)	103, 448
BseLI	CCNNNNNNNGG	4 cut(s)	27, 303, 356, 1059
BseMII	CTCAG	4 cut(s)	368, 663, 791, 1019
BseNI	ACTGG	3 cut(s)	199, 640, 1067
BseRI	GAGGAG	1 cut(s)	461
BseSI	GKGCMC	1 cut(s)	290
BseXI	GCAGC	6 cut(s)	73, 282, 319, 475, 478, 1020
BsgI	GTGCAG	1 cut(s)	1027
BshFI	GGCC	2 cut(s)	288, 603
BshNI	GGYRCC	2 cut(s)	42, 244
BsiHKAI	GWGCWC	1 cut(s)	364
BsiHKCI	CYCGRG	2 cut(s)	455, 966
BsiSI	CCGG	7 cut(s)	27, 37, 242, 440, 456, 498, 991
BslFI	GGGAC	1 cut(s)	711
BslI	CCNNNNNNNGG	4 cut(s)	27, 303, 356, 1059
BsmAI	GTCTC	3 cut(s)	114, 168, 1082
BsmBI	CGTCTC	3 cut(s)	114, 168, 1082
BsmFI	GGGAC	1 cut(s)	711
BsmI	GAATGC	2 cut(s)	406, 725
BsnI	GGCC	2 cut(s)	288, 603
BsoBI	CYCGRG	2 cut(s)	455, 966
Bsp120I	GGGCCC	1 cut(s)	286
Bsp1286I	GDGCHC	2 cut(s)	290, 364
Bsp143I	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
BspANI	GGCC	2 cut(s)	288, 603
BspCNI	CTCAG	4 cut(s)	367, 662, 790, 1020
BspLI	GGNNCC	6 cut(s)	44, 246, 288, 289, 464, 1034
BspMI	ACCTGC	1 cut(s)	234
BspPI	GGATC	2 cut(s)	187, 1080
BspT107I	GGYRCC	2 cut(s)	42, 244
BsrFI	RCCGGY	2 cut(s)	241, 990
BsrI	ACTGG	3 cut(s)	199, 640, 1067
BssAI	RCCGGY	2 cut(s)	241, 990
BssECI	CCNNGG	4 cut(s)	27, 455, 604, 786
BssMI	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
BssT1I	CCWWGG	1 cut(s)	604
Bst2UI	CCWGG	1 cut(s)	788
Bst4CI	ACNGT	5 cut(s)	249, 511, 542, 586, 979
BstC8I	GCNNGC	3 cut(s)	50, 569, 992
BstDEI	CTNAG	5 cut(s)	354, 649, 777, 1020, 1028
BstF5I	GGATG	2 cut(s)	103, 448
BstHHI	GCGC	1 cut(s)	496
BstKTI	GATC	6 cut(s)	182, 390, 783, 885, 916, 1075
BstMAI	GTCTC	3 cut(s)	114, 168, 1082
BstMBI	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
BstMWI	GCNNNNNNNGC	5 cut(s)	49, 238, 341, 436, 1008
BstNI	CCWGG	1 cut(s)	788
BstNSI	RCATGY	2 cut(s)	1000, 1006
BstSCI	CCNGG	5 cut(s)	26, 454, 455, 496, 786
BstSFI	CTRYAG	2 cut(s)	875, 1057
BstSLI	GKGCMC	1 cut(s)	290
BstV1I	GCAGC	6 cut(s)	73, 282, 319, 475, 478, 1020
BstV2I	GAAGAC	1 cut(s)	389
BstX2I	RGATCY	1 cut(s)	882
BstXI	CCANNNNNNTGG	1 cut(s)	65
BstYI	RGATCY	1 cut(s)	882
Bsu36I	CCTNAGG	1 cut(s)	354
BsuI	GTATCC	1 cut(s)	261
BsuRI	GGCC	2 cut(s)	288, 603
BtsCI	GGATG	2 cut(s)	103, 448
BtsIMutI	CAGTG	3 cut(s)	591, 657, 1074
BveI	ACCTGC	1 cut(s)	234
Cac8I	GCNNGC	3 cut(s)	50, 569, 992
CfoI	GCGC	1 cut(s)	496
Cfr10I	RCCGGY	2 cut(s)	241, 990
Cfr13I	GGNCC	3 cut(s)	125, 286, 287
Cfr9I	CCCGGG	1 cut(s)	455
Csp6I	GTAC	3 cut(s)	72, 245, 868
CviAII	CATG	4 cut(s)	77, 987, 997, 1003
CviJI	RGCY	9 cut(s)	288, 439, 567, 603, 716, 767, 874, 964, 1106
CviKI_1	RGCY	9 cut(s)	288, 439, 567, 603, 716, 767, 874, 964, 1106
CviQI	GTAC	3 cut(s)	72, 245, 868
DdeI	CTNAG	5 cut(s)	354, 649, 777, 1020, 1028
DpnI	GATC	6 cut(s)	181, 389, 782, 884, 915, 1074
DpnII	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
DrdI	GACNNNNNNGTC	1 cut(s)	692
DseDI	GACNNNNNNGTC	1 cut(s)	692
EciI	GGCGGA	2 cut(s)	129, 183
Eco130I	CCWWGG	1 cut(s)	604
Eco147I	AGGCCT	1 cut(s)	603
Eco24I	GRGCYC	1 cut(s)	290
Eco47I	GGWCC	1 cut(s)	125
Eco81I	CCTNAGG	1 cut(s)	354
Eco88I	CYCGRG	2 cut(s)	455, 966
EcoO109I	RGGNCCY	1 cut(s)	287
EcoRI	GAATTC	2 cut(s)	772, 898
EcoRII	CCWGG	1 cut(s)	786
EcoT14I	CCWWGG	1 cut(s)	604
EcoT38I	GRGCYC	1 cut(s)	290
ErhI	CCWWGG	1 cut(s)	604
Esp3I	CGTCTC	3 cut(s)	114, 168, 1082
FaeI	CATG	4 cut(s)	80, 990, 1000, 1006
FalI	AAGNNNNNCTT	2 cut(s)	551, 583
FaqI	GGGAC	1 cut(s)	711
FatI	CATG	4 cut(s)	76, 986, 996, 1002
FauI	CCCGC	4 cut(s)	57, 304, 423, 822
FbaI	TGATCA	1 cut(s)	913
Fnu4HI	GCNGC	9 cut(s)	87, 143, 230, 233, 271, 333, 489, 492, 1009
FokI	GGATG	2 cut(s)	90, 455
FriOI	GRGCYC	1 cut(s)	290
Fsp4HI	GCNGC	9 cut(s)	87, 143, 230, 233, 271, 333, 489, 492, 1009
FspBI	CTAG	1 cut(s)	768
GlaI	GCGC	1 cut(s)	495
GluI	GCNGC	9 cut(s)	87, 143, 230, 233, 271, 333, 489, 492, 1009
HaeIII	GGCC	2 cut(s)	288, 603
HapII	CCGG	7 cut(s)	27, 37, 242, 440, 456, 498, 991
HhaI	GCGC	1 cut(s)	496
Hin1II	CATG	4 cut(s)	80, 990, 1000, 1006
Hin6I	GCGC	1 cut(s)	494
HinP1I	GCGC	1 cut(s)	494
HindIII	AAGCTT	1 cut(s)	565
HinfI	GANTC	6 cut(s)	131, 219, 276, 422, 451, 929
HpaII	CCGG	7 cut(s)	27, 37, 242, 440, 456, 498, 991
HphI	GGTGA	7 cut(s)	382, 695, 721, 775, 844, 865, 1105
Hpy166II	GTNNAC	3 cut(s)	310, 545, 1096
Hpy188I	TCNGA	7 cut(s)	120, 156, 381, 780, 961, 1029, 1117
Hpy188III	TCNNGA	4 cut(s)	415, 630, 968, 1036
Hpy8I	GTNNAC	3 cut(s)	310, 545, 1096
HpyAV	CCTTC	2 cut(s)	706, 799
HpyCH4III	ACNGT	5 cut(s)	249, 511, 542, 586, 979
HpyCH4IV	ACGT	1 cut(s)	479
HpyCH4V	TGCA	3 cut(s)	536, 1002, 1008
HpyF10VI	GCNNNNNNNGC	5 cut(s)	49, 238, 341, 436, 1008
HpyF3I	CTNAG	5 cut(s)	354, 649, 777, 1020, 1028
HpySE526I	ACGT	1 cut(s)	479
Hsp92II	CATG	4 cut(s)	80, 990, 1000, 1006
HspAI	GCGC	1 cut(s)	494
KpnI	GGTACC	1 cut(s)	248
KroI	GCCGGC	1 cut(s)	990
KroNI	GCCGGC	1 cut(s)	992
Ksp22I	TGATCA	1 cut(s)	913
Kzo9I	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
LmnI	GCTCC	3 cut(s)	340, 367, 1103
Lsp1109I	GCAGC	6 cut(s)	73, 282, 319, 475, 478, 1020
LweI	GCATC	3 cut(s)	475, 523, 1037
MaeI	CTAG	1 cut(s)	768
MaeII	ACGT	1 cut(s)	479
MaeIII	GTNAC	2 cut(s)	580, 683
MalI	GATC	6 cut(s)	181, 389, 782, 884, 915, 1074
MboI	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
MboII	GAAGA	2 cut(s)	394, 542
MfeI	CAATTG	1 cut(s)	301
MflI	RGATCY	1 cut(s)	882
MhlI	GDGCHC	2 cut(s)	290, 364
MluCI	AATT	7 cut(s)	7, 301, 749, 760, 772, 898, 948
MlyI	GAGTC	3 cut(s)	125, 285, 416
MmeI	TCCRAC	1 cut(s)	736
MroNI	GCCGGC	1 cut(s)	990
MroXI	GAANNNNTTC	1 cut(s)	928
MseI	TTAA	3 cut(s)	396, 573, 671
MslI	CAYNNNNRTG	1 cut(s)	1001
MspA1I	CMGCKG	2 cut(s)	273, 1011
MspI	CCGG	7 cut(s)	27, 37, 242, 440, 456, 498, 991
MspR9I	CCNGG	5 cut(s)	28, 456, 457, 498, 788
MunI	CAATTG	1 cut(s)	301
Mva1269I	GAATGC	2 cut(s)	406, 725
MvaI	CCWGG	1 cut(s)	788
MwoI	GCNNNNNNNGC	5 cut(s)	49, 238, 341, 436, 1008
NaeI	GCCGGC	1 cut(s)	992
NciI	CCSGG	4 cut(s)	28, 456, 457, 498
NdeII	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
NgoMIV	GCCGGC	1 cut(s)	990
NlaIII	CATG	4 cut(s)	80, 990, 1000, 1006
NlaIV	GGNNCC	6 cut(s)	44, 246, 288, 289, 464, 1034
NmuCI	GTSAC	1 cut(s)	683
NspI	RCATGY	2 cut(s)	1000, 1006
PaeR7I	CTCGAG	1 cut(s)	966
PceI	AGGCCT	1 cut(s)	603
PciI	ACATGT	1 cut(s)	996
PctI	GAATGC	2 cut(s)	406, 725
PdiI	GCCGGC	1 cut(s)	992
PdmI	GAANNNNTTC	1 cut(s)	928
PfeI	GAWTC	3 cut(s)	219, 451, 929
PkrI	GCNGC	9 cut(s)	88, 144, 231, 234, 272, 334, 490, 493, 1010
PleI	GAGTC	3 cut(s)	125, 284, 416
PpsI	GAGTC	3 cut(s)	125, 284, 416
PscI	ACATGT	1 cut(s)	996
Psp6I	CCWGG	1 cut(s)	786
PspGI	CCWGG	1 cut(s)	786
PspN4I	GGNNCC	6 cut(s)	44, 246, 288, 289, 464, 1034
PspOMI	GGGCCC	1 cut(s)	286
PspPI	GGNCC	3 cut(s)	125, 286, 287
PsuI	RGATCY	1 cut(s)	882
RsaI	GTAC	3 cut(s)	73, 246, 869
RsaNI	GTAC	3 cut(s)	72, 245, 868
RseI	CAYNNNNRTG	1 cut(s)	1001
SaqAI	TTAA	3 cut(s)	396, 573, 671
SatI	GCNGC	9 cut(s)	87, 143, 230, 233, 271, 333, 489, 492, 1009
Sau3AI	GATC	6 cut(s)	179, 387, 780, 882, 913, 1072
Sau96I	GGNCC	3 cut(s)	125, 286, 287
SchI	GAGTC	3 cut(s)	125, 285, 416
ScrFI	CCNGG	5 cut(s)	28, 456, 457, 498, 788
SduI	GDGCHC	2 cut(s)	290, 364
SfaNI	GCATC	3 cut(s)	475, 523, 1037
SfcI	CTRYAG	2 cut(s)	875, 1057
Sfr274I	CTCGAG	1 cut(s)	966
SinI	GGWCC	1 cut(s)	125
SlaI	CTCGAG	1 cut(s)	966
SmaI	CCCGGG	1 cut(s)	457
SmiMI	CAYNNNNRTG	1 cut(s)	1001
SmlI	CTYRAG	1 cut(s)	966
SmoI	CTYRAG	1 cut(s)	966
Sse9I	AATT	7 cut(s)	7, 301, 749, 760, 772, 898, 948
SseBI	AGGCCT	1 cut(s)	603
SspMI	CTAG	1 cut(s)	768
StuI	AGGCCT	1 cut(s)	603
StyD4I	CCNGG	5 cut(s)	26, 454, 455, 496, 786
StyI	CCWWGG	1 cut(s)	604
TaaI	ACNGT	5 cut(s)	249, 511, 542, 586, 979
TaiI	ACGT	1 cut(s)	482
TaqI	TCGA	1 cut(s)	967
TasI	AATT	7 cut(s)	7, 301, 749, 760, 772, 898, 948
TauI	GCSGC	3 cut(s)	145, 232, 235
TfiI	GAWTC	3 cut(s)	219, 451, 929
Tru1I	TTAA	3 cut(s)	396, 573, 671
Tru9I	TTAA	3 cut(s)	396, 573, 671
TscAI	CASTG	3 cut(s)	591, 657, 1074
TseFI	GTSAC	1 cut(s)	683
TseI	GCWGC	6 cut(s)	86, 270, 332, 488, 491, 1008
Tsp45I	GTSAC	1 cut(s)	683
TspDTI	ATGAA	2 cut(s)	750, 851
TspGWI	ACGGA	2 cut(s)	96, 138
TspMI	CCCGGG	1 cut(s)	455
TspRI	CASTG	3 cut(s)	591, 657, 1074
VpaK11BI	GGWCC	1 cut(s)	125
XapI	RAATTY	3 cut(s)	760, 772, 898
XceI	RCATGY	2 cut(s)	1000, 1006
XhoI	CTCGAG	1 cut(s)	966
XmaI	CCCGGG	1 cut(s)	455
XmnI	GAANNNNTTC	1 cut(s)	928
XspI	CTAG	1 cut(s)	768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.