Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0012841

Physical Location & Seq

Genomic Coordinates Reverse (-)

64759117 .. 64763874

Gene Structure 4758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035309

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGCAAAATGCAGCGACAAGTATGTCAAAGTGTCGAACCTCCGAGAAATTCAACCAGCGACGCCGCGCCCAGCACAAAATAGAGGACAACGTTCGCCGCGAGCGCCACTTCGACTCCACTACTAGAATCGCCACCGTCGCCGCCGACTCCTCCTCCGCCGAAACAACATTCAAATCCATAGGCATCGAAAAGCTCAAGAATGAAATCGGACCTCCTGAGGATCTCCAAAGCAAGTCTCGGAAATCATTTATACTGTTTGATAATTTTGCCAAACTGAAAAAGATTCCGGCTTTTAAACTGAATTTCTCGAAAATGGGAATCGGAAGCAGTAGCGCCGGTCGCCAGAGGCACCGGCCGCCTACGCCTCCGGCTCATCCACAACCTCAAAATGGTGGCAGATATGGTTACGCTGGTGCCTCACCACCTTACCCGCCCCAATATCCAAACGAACCAATCCCCAATCCCGGCCAGTACCACCAATACCCACATCAATTTCCCAACGGATCAAATCCCAATCAAGCCCATTTCTACCAGTACTCTGCATTCTATCCACCGCCGCCGATACCGGGTGGGTACCACCGCGGCGGGGCCTTCATGGGCCCTCCTCCGCCGGCCAATTGGGTTCCGGGGCAGTACCCTTATGGTGCTCCTCCACCCATTCCGGGTGCTCCCTTTGTAGAGCATCAGAAGACGGTTACTATCAAGAATGATGTGAATATCAAGAAGGACTCTTTGAGGGTTGAGCCGGATGAGGAGAATCCCGGCAAGTTTGTTGTTGCCTTAACTTTTGATGCCGCCGCACCCGGAAGCATTACCGTCATGTTTTTTACGAAAGAAGATGCAGACTTTAACTTGATAGCAACAAAGGAAAGCTTGCTTGAACCTGTTAAAGTGCCATTTGACGAAGGTCTTGGTCAAAAGTTTAGACAACCTTGTGGAACTGGGATCGACTTTTCAATGTTTGAGGAGATAGGGTTGACAAAAGAGGGTGACATAGAAGTTTATCCTCTTGTGGTGAAGGCTGAAGCACATCTCGTGAATGGAGGTGAACGTGAATCAGAGGGAAATTCCACCGGGAACTCTCAGATCACACAGGCAGTGTTTGAAAAGAAGGAGAATGGTGAGTACAAAGTGCGGGTGGTGAAACAGATACTATGGGTGGATAATATGAGGTATGAGTTGCAGGAGATCTATGGTATTGGGAATGCAGTTGAAGGTGATCAAAATGATAATGAAGCTGGAAAAGACTGTATAATTTGCTTGTCAGAACCTCGAGATACAACTGTGCTCCCTTGCCGGCACATGTGCATGTGCAGTGGTTGTGCCAAGGTTCTGAGGTTCCAGACAAATAGATGCCCCGTCTGTAGGCAACCAGTTGAACGGCTCTTGGAAATCAAGGTGACCAATGGAGCTGATGGTGCTCTAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0008277 GO:0008589 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0023057 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0043949 GO:0043951 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0045744 GO:0045879 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

477

Amino Acids

52.74

Weight (kDa)

7.95

Isoelectric Point (pI)

44.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNF157-like_N	PF26192	238 - 394	3.4e-64	RNF157-like N-terminal domain
zf-C3HC4_3	PF13920	415 - 461	1.3e-15	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	416 - 456	3.6e-06	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53410
fragaria_vesca	FvH4_3g32531 FvH4_3g32531
malus_domestica	MD03G1116400.v1.1 MD11G1134600.v1.1
prunus_persica	Prupe.6G100500_v2.0.a1
pyrus_communis	pycom11g11170
rosa_chinensis	RchiOBHm_Chr5g0059601
rosa_laevigata	RLG00000035307 RLG00000035309
rosa_multiflora	Rmu_ssc0000488.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021010
rosa_rugosa	Rorug05G0323600
rosa_samantha	Rh5AG388600 Rh5BG400200 Rh5CG424500 Rh5DG416500
rosa_wichuraiana	Rw5G036590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	22
Acc65I	GGTACC	1 cut(s)	573
AccB1I	GGYRCC	3 cut(s)	348, 413, 573
AccII	CGCG	3 cut(s)	66, 99, 582
AclI	AACGTT	1 cut(s)	90
AclWI	GGATC	3 cut(s)	228, 511, 953
AcoI	YGGCCR	3 cut(s)	353, 466, 612
AcsI	RAATTY	3 cut(s)	47, 301, 1066
AcuI	CTGAAG	1 cut(s)	1044
AcyI	GRCGYC	1 cut(s)	61
AfaI	GTAC	5 cut(s)	473, 536, 575, 635, 1127
AfiI	CCNNNNNNNGG	6 cut(s)	389, 464, 566, 586, 662, 1365
AflIII	ACRYGT	1 cut(s)	1302
AgsI	TTSAA	7 cut(s)	52, 172, 881, 957, 1106, 1214, 1379
AluBI	AGCT	4 cut(s)	193, 873, 1238, 1412
AluI	AGCT	4 cut(s)	193, 873, 1238, 1412
Alw21I	GWGCWC	4 cut(s)	649, 670, 1290, 1423
Alw26I	GTCTC	1 cut(s)	240
AlwI	GGATC	3 cut(s)	228, 511, 953
Ama87I	CYCGRG	1 cut(s)	1272
AoxI	GGCC	5 cut(s)	353, 466, 588, 598, 612
ApaI	GGGCCC	1 cut(s)	602
ApeKI	GCWGC	1 cut(s)	11
ApoI	RAATTY	3 cut(s)	47, 301, 1066
Asp718I	GGTACC	1 cut(s)	573
AspLEI	GCGC	3 cut(s)	68, 105, 335
AspS9I	GGNCC	4 cut(s)	209, 588, 598, 599
AsuC2I	CCSGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
AsuHPI	GGTGA	8 cut(s)	411, 1001, 1027, 1058, 1133, 1153, 1229, 1411
AvaI	CYCGRG	1 cut(s)	1272
AvaII	GGWCC	1 cut(s)	209
AxyI	CCTNAGG	1 cut(s)	216
BaeGI	GKGCMC	1 cut(s)	602
BaeI	ACNNNNGTAYC	2 cut(s)	1269, 1302
BanI	GGYRCC	3 cut(s)	348, 413, 573
BanII	GRGCYC	1 cut(s)	602
BauI	CACGAG	1 cut(s)	1034
BbsI	GAAGAC	1 cut(s)	695
Bbv12I	GWGCWC	4 cut(s)	649, 670, 1290, 1423
BbvI	GCAGC	1 cut(s)	23
BccI	CCATC	1 cut(s)	1409
BceAI	ACGGC	1 cut(s)	1397
BclI	TGATCA	1 cut(s)	1219
BcnI	CCSGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
BcoDI	GTCTC	1 cut(s)	240
BfaI	CTAG	2 cut(s)	123, 1424
BfmI	CTRYAG	1 cut(s)	1363
BfoI	RGCGCY	2 cut(s)	106, 336
BglII	AGATCT	1 cut(s)	1188
BisI	GCNGC	9 cut(s)	12, 64, 97, 141, 356, 557, 583, 795, 798
BlsI	GCNGC	9 cut(s)	13, 65, 98, 142, 357, 558, 584, 796, 799
BmcAI	AGTACT	1 cut(s)	536
Bme1390I	CCNGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
Bme18I	GGWCC	1 cut(s)	209
BmeT110I	CYCGRG	1 cut(s)	1272
BmgT120I	GGNCC	4 cut(s)	209, 588, 598, 599
BmiI	GGNNCC	7 cut(s)	350, 415, 575, 589, 600, 624, 1340
BmrFI	CCNGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
BmrI	ACTGGG	1 cut(s)	951
BmsI	GCATC	5 cut(s)	192, 691, 781, 829, 1343
BmuI	ACTGGG	1 cut(s)	951
BoxI	GACNNNNGTC	1 cut(s)	906
BpiI	GAAGAC	1 cut(s)	695
BpuEI	CTTGAG	1 cut(s)	179
BpuMI	CCSGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
BsaHI	GRCGYC	1 cut(s)	61
BsaJI	CCNNGG	3 cut(s)	580, 626, 1326
BsaXI	ACNNNNNCTCC	6 cut(s)	98, 128, 137, 167, 959, 989
Bsc4I	CCNNNNNNNGG	6 cut(s)	389, 464, 566, 586, 662, 1365
Bse118I	RCCGGY	4 cut(s)	335, 351, 610, 1296
Bse1I	ACTGG	4 cut(s)	469, 532, 946, 1373
Bse21I	CCTNAGG	1 cut(s)	216
BseDI	CCNNGG	3 cut(s)	580, 626, 1326
BseGI	GGATG	2 cut(s)	373, 754
BseLI	CCNNNNNNNGG	6 cut(s)	389, 464, 566, 586, 662, 1365
BseMII	CTCAG	3 cut(s)	207, 1097, 1325
BseNI	ACTGG	4 cut(s)	469, 532, 946, 1373
BseRI	GAGGAG	6 cut(s)	139, 142, 594, 639, 767, 980
BseSI	GKGCMC	1 cut(s)	602
BseX3I	CGGCCG	1 cut(s)	353
BseXI	GCAGC	1 cut(s)	23
BseYI	CCCAGC	1 cut(s)	69
BsgI	GTGCAG	1 cut(s)	1333
Bsh1236I	CGCG	3 cut(s)	66, 99, 582
Bsh1285I	CGRYCG	2 cut(s)	340, 356
BshFI	GGCC	5 cut(s)	355, 468, 590, 600, 614
BshNI	GGYRCC	3 cut(s)	348, 413, 573
BsiEI	CGRYCG	2 cut(s)	340, 356
BsiHKAI	GWGCWC	4 cut(s)	649, 670, 1290, 1423
BsiHKCI	CYCGRG	1 cut(s)	1272
BslI	CCNNNNNNNGG	6 cut(s)	389, 464, 566, 586, 662, 1365
BsmAI	GTCTC	1 cut(s)	240
BsmI	GAATGC	2 cut(s)	542, 1210
BsnI	GGCC	5 cut(s)	355, 468, 590, 600, 614
BsoBI	CYCGRG	1 cut(s)	1272
Bsp120I	GGGCCC	1 cut(s)	598
Bsp1286I	GDGCHC	5 cut(s)	602, 649, 670, 1290, 1423
Bsp143I	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
BspANI	GGCC	5 cut(s)	355, 468, 590, 600, 614
BspCNI	CTCAG	3 cut(s)	208, 1096, 1326
BspFNI	CGCG	3 cut(s)	66, 99, 582
BspLI	GGNNCC	7 cut(s)	350, 415, 575, 589, 600, 624, 1340
BspPI	GGATC	3 cut(s)	228, 511, 953
BspT107I	GGYRCC	3 cut(s)	348, 413, 573
BsrFI	RCCGGY	4 cut(s)	335, 351, 610, 1296
BsrI	ACTGG	4 cut(s)	469, 532, 946, 1373
BssAI	RCCGGY	4 cut(s)	335, 351, 610, 1296
BssECI	CCNNGG	3 cut(s)	580, 626, 1326
BssMI	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
BssNI	GRCGYC	1 cut(s)	61
BssSI	CACGAG	1 cut(s)	1034
BssT1I	CCWWGG	1 cut(s)	1326
Bst2BI	CACGAG	1 cut(s)	1034
Bst4CI	ACNGT	6 cut(s)	136, 255, 694, 817, 1250, 1285
BstACI	GRCGYC	1 cut(s)	61
BstC8I	GCNNGC	4 cut(s)	101, 612, 875, 1298
BstDEI	CTNAG	3 cut(s)	216, 1083, 1334
BstDSI	CCRYGG	1 cut(s)	580
BstEII	GGTNACC	1 cut(s)	1399
BstF5I	GGATG	2 cut(s)	373, 754
BstFNI	CGCG	3 cut(s)	66, 99, 582
BstH2I	RGCGCY	2 cut(s)	106, 336
BstHHI	GCGC	3 cut(s)	68, 105, 335
BstKTI	GATC	6 cut(s)	223, 506, 948, 1089, 1191, 1222
BstMAI	GTCTC	1 cut(s)	240
BstMBI	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
BstMCI	CGRYCG	2 cut(s)	340, 356
BstMWI	GCNNNNNNNGC	6 cut(s)	102, 137, 339, 355, 361, 1418
BstNSI	RCATGY	2 cut(s)	1306, 1312
BstPAI	GACNNNNGTC	1 cut(s)	906
BstPI	GGTNACC	1 cut(s)	1399
BstSCI	CCNGG	7 cut(s)	463, 565, 625, 661, 760, 802, 1073
BstSFI	CTRYAG	1 cut(s)	1363
BstSLI	GKGCMC	1 cut(s)	602
BstUI	CGCG	3 cut(s)	66, 99, 582
BstV1I	GCAGC	1 cut(s)	23
BstV2I	GAAGAC	1 cut(s)	695
BstX2I	RGATCY	2 cut(s)	220, 1188
BstYI	RGATCY	2 cut(s)	220, 1188
BstZI	CGGCCG	1 cut(s)	353
Bsu36I	CCTNAGG	1 cut(s)	216
BsuRI	GGCC	5 cut(s)	355, 468, 590, 600, 614
BtgI	CCRYGG	1 cut(s)	580
BtsCI	GGATG	2 cut(s)	373, 754
BtsI	GCAGTG	2 cut(s)	1104, 1321
BtsIMutI	CAGTG	2 cut(s)	1104, 1321
Cac8I	GCNNGC	4 cut(s)	101, 612, 875, 1298
CfoI	GCGC	3 cut(s)	68, 105, 335
Cfr10I	RCCGGY	4 cut(s)	335, 351, 610, 1296
Cfr13I	GGNCC	4 cut(s)	209, 588, 598, 599
Cfr42I	CCGCGG	1 cut(s)	583
CseI	GACGC	1 cut(s)	69
Csp6I	GTAC	5 cut(s)	472, 535, 574, 634, 1126
CviAII	CATG	4 cut(s)	595, 820, 1303, 1309
CviQI	GTAC	5 cut(s)	472, 535, 574, 634, 1126
DdeI	CTNAG	3 cut(s)	216, 1083, 1334
DpnI	GATC	6 cut(s)	222, 505, 947, 1088, 1190, 1221
DpnII	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
DraI	TTTAAA	1 cut(s)	295
DrdI	GACNNNNNNGTC	1 cut(s)	22
DseDI	GACNNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	3 cut(s)	353, 466, 612
EagI	CGGCCG	1 cut(s)	353
EciI	GGCGGA	2 cut(s)	145, 597
EclXI	CGGCCG	1 cut(s)	353
Eco130I	CCWWGG	1 cut(s)	1326
Eco24I	GRGCYC	1 cut(s)	602
Eco47I	GGWCC	1 cut(s)	209
Eco52I	CGGCCG	1 cut(s)	353
Eco57I	CTGAAG	1 cut(s)	1044
Eco81I	CCTNAGG	1 cut(s)	216
Eco88I	CYCGRG	1 cut(s)	1272
Eco91I	GGTNACC	1 cut(s)	1399
EcoO109I	RGGNCCY	2 cut(s)	588, 599
EcoO65I	GGTNACC	1 cut(s)	1399
EcoT14I	CCWWGG	1 cut(s)	1326
EcoT38I	GRGCYC	1 cut(s)	602
ErhI	CCWWGG	1 cut(s)	1326
FaeI	CATG	4 cut(s)	598, 823, 1306, 1312
FalI	AAGNNNNNCTT	2 cut(s)	857, 889
FatI	CATG	4 cut(s)	594, 819, 1302, 1308
FauI	CCCGC	3 cut(s)	438, 578, 1128
FbaI	TGATCA	1 cut(s)	1219
Fnu4HI	GCNGC	9 cut(s)	12, 64, 97, 141, 356, 557, 583, 795, 798
FokI	GGATG	2 cut(s)	360, 761
FriOI	GRGCYC	1 cut(s)	602
Fsp4HI	GCNGC	9 cut(s)	12, 64, 97, 141, 356, 557, 583, 795, 798
FspBI	CTAG	2 cut(s)	123, 1424
GlaI	GCGC	3 cut(s)	67, 104, 334
GluI	GCNGC	9 cut(s)	12, 64, 97, 141, 356, 557, 583, 795, 798
GsaI	CCCAGC	1 cut(s)	73
HaeII	RGCGCY	2 cut(s)	106, 336
HaeIII	GGCC	5 cut(s)	355, 468, 590, 600, 614
HgaI	GACGC	1 cut(s)	69
HhaI	GCGC	3 cut(s)	68, 105, 335
Hin1I	GRCGYC	1 cut(s)	61
Hin1II	CATG	4 cut(s)	598, 823, 1306, 1312
Hin6I	GCGC	3 cut(s)	66, 103, 333
HinP1I	GCGC	3 cut(s)	66, 103, 333
HincII	GTYRAC	1 cut(s)	978
HindII	GTYRAC	1 cut(s)	978
HindIII	AAGCTT	1 cut(s)	871
HinfI	GANTC	8 cut(s)	113, 126, 146, 283, 318, 728, 757, 1055
HphI	GGTGA	8 cut(s)	411, 1001, 1027, 1058, 1133, 1153, 1229, 1411
Hpy166II	GTNNAC	2 cut(s)	978, 1049
Hpy188I	TCNGA	9 cut(s)	43, 209, 240, 323, 687, 1060, 1086, 1267, 1335
Hpy188III	TCNNGA	8 cut(s)	196, 215, 307, 703, 721, 1036, 1274, 1342
Hpy8I	GTNNAC	2 cut(s)	978, 1049
Hpy99I	CGWCG	2 cut(s)	63, 140
HpyAV	CCTTC	6 cut(s)	601, 718, 899, 1012, 1105, 1208
HpyCH4III	ACNGT	6 cut(s)	136, 255, 694, 817, 1250, 1285
HpyCH4IV	ACGT	2 cut(s)	90, 1051
HpyCH4V	TGCA	8 cut(s)	4, 11, 542, 842, 1183, 1208, 1308, 1314
HpyF10VI	GCNNNNNNNGC	6 cut(s)	102, 137, 339, 355, 361, 1418
HpyF3I	CTNAG	3 cut(s)	216, 1083, 1334
HpySE526I	ACGT	2 cut(s)	90, 1051
Hsp92I	GRCGYC	1 cut(s)	61
Hsp92II	CATG	4 cut(s)	598, 823, 1306, 1312
HspAI	GCGC	3 cut(s)	66, 103, 333
KpnI	GGTACC	1 cut(s)	577
KroI	GCCGGC	2 cut(s)	610, 1296
KroNI	GCCGGC	2 cut(s)	612, 1298
Ksp22I	TGATCA	1 cut(s)	1219
KspI	CCGCGG	1 cut(s)	583
Kzo9I	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
LmnI	GCTCC	4 cut(s)	652, 673, 1293, 1409
Lsp1109I	GCAGC	1 cut(s)	23
LweI	GCATC	5 cut(s)	192, 691, 781, 829, 1343
MaeI	CTAG	2 cut(s)	123, 1424
MaeII	ACGT	2 cut(s)	90, 1051
MaeIII	GTNAC	4 cut(s)	404, 694, 989, 1399
MalI	GATC	6 cut(s)	222, 505, 947, 1088, 1190, 1221
MboI	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
MboII	GAAGA	2 cut(s)	700, 848
MfeI	CAATTG	1 cut(s)	616
MflI	RGATCY	2 cut(s)	220, 1188
MhlI	GDGCHC	5 cut(s)	602, 649, 670, 1290, 1423
MluCI	AATT	7 cut(s)	47, 262, 301, 491, 616, 1066, 1254
MlyI	GAGTC	3 cut(s)	107, 140, 722
MroNI	GCCGGC	2 cut(s)	610, 1296
MseI	TTAA	4 cut(s)	294, 782, 849, 888
MslI	CAYNNNNRTG	1 cut(s)	1307
MspA1I	CMGCKG	1 cut(s)	582
MspR9I	CCNGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
MunI	CAATTG	1 cut(s)	616
Mva1269I	GAATGC	2 cut(s)	542, 1210
MvnI	CGCG	3 cut(s)	66, 99, 582
MwoI	GCNNNNNNNGC	6 cut(s)	102, 137, 339, 355, 361, 1418
NaeI	GCCGGC	2 cut(s)	612, 1298
NciI	CCSGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
NdeII	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
NgoMIV	GCCGGC	2 cut(s)	610, 1296
NlaIII	CATG	4 cut(s)	598, 823, 1306, 1312
NlaIV	GGNNCC	7 cut(s)	350, 415, 575, 589, 600, 624, 1340
NmuCI	GTSAC	2 cut(s)	989, 1399
NspI	RCATGY	2 cut(s)	1306, 1312
PaeR7I	CTCGAG	1 cut(s)	1272
PciI	ACATGT	1 cut(s)	1302
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PctI	GAATGC	2 cut(s)	542, 1210
PdiI	GCCGGC	2 cut(s)	612, 1298
PfeI	GAWTC	5 cut(s)	126, 283, 318, 757, 1055
PkrI	GCNGC	9 cut(s)	13, 65, 98, 142, 357, 558, 584, 796, 799
PleI	GAGTC	3 cut(s)	107, 140, 722
PpsI	GAGTC	3 cut(s)	107, 140, 722
PscI	ACATGT	1 cut(s)	1302
PshAI	GACNNNNGTC	1 cut(s)	906
Psp1406I	AACGTT	1 cut(s)	90
PspEI	GGTNACC	1 cut(s)	1399
PspFI	CCCAGC	1 cut(s)	69
PspN4I	GGNNCC	7 cut(s)	350, 415, 575, 589, 600, 624, 1340
PspOMI	GGGCCC	1 cut(s)	598
PspPI	GGNCC	4 cut(s)	209, 588, 598, 599
PsuI	RGATCY	2 cut(s)	220, 1188
RsaI	GTAC	5 cut(s)	473, 536, 575, 635, 1127
RsaNI	GTAC	5 cut(s)	472, 535, 574, 634, 1126
RseI	CAYNNNNRTG	1 cut(s)	1307
SacII	CCGCGG	1 cut(s)	583
SaqAI	TTAA	4 cut(s)	294, 782, 849, 888
SatI	GCNGC	9 cut(s)	12, 64, 97, 141, 356, 557, 583, 795, 798
Sau3AI	GATC	6 cut(s)	220, 503, 945, 1086, 1188, 1219
Sau96I	GGNCC	4 cut(s)	209, 588, 598, 599
ScaI	AGTACT	1 cut(s)	536
SchI	GAGTC	3 cut(s)	107, 140, 722
ScrFI	CCNGG	7 cut(s)	465, 567, 627, 663, 762, 804, 1075
SduI	GDGCHC	5 cut(s)	602, 649, 670, 1290, 1423
SfaNI	GCATC	5 cut(s)	192, 691, 781, 829, 1343
SfcI	CTRYAG	1 cut(s)	1363
Sfr274I	CTCGAG	1 cut(s)	1272
Sfr303I	CCGCGG	1 cut(s)	583
SgrBI	CCGCGG	1 cut(s)	583
SinI	GGWCC	1 cut(s)	209
SlaI	CTCGAG	1 cut(s)	1272
SmiMI	CAYNNNNRTG	1 cut(s)	1307
SmlI	CTYRAG	2 cut(s)	194, 1272
SmoI	CTYRAG	2 cut(s)	194, 1272
Sse9I	AATT	7 cut(s)	47, 262, 301, 491, 616, 1066, 1254
SspMI	CTAG	2 cut(s)	123, 1424
StyD4I	CCNGG	7 cut(s)	463, 565, 625, 661, 760, 802, 1073
StyI	CCWWGG	1 cut(s)	1326
TaaI	ACNGT	6 cut(s)	136, 255, 694, 817, 1250, 1285
TaiI	ACGT	2 cut(s)	93, 1054
TaqI	TCGA	6 cut(s)	34, 111, 186, 308, 948, 1273
TasI	AATT	7 cut(s)	47, 262, 301, 491, 616, 1066, 1254
TatI	WGTACW	2 cut(s)	534, 1125
TauI	GCSGC	8 cut(s)	66, 99, 143, 358, 559, 585, 797, 800
TfiI	GAWTC	5 cut(s)	126, 283, 318, 757, 1055
Tru1I	TTAA	4 cut(s)	294, 782, 849, 888
Tru9I	TTAA	4 cut(s)	294, 782, 849, 888
TscAI	CASTG	2 cut(s)	1104, 1321
TseFI	GTSAC	2 cut(s)	989, 1399
TseI	GCWGC	1 cut(s)	11
Tsp45I	GTSAC	2 cut(s)	989, 1399
TspDTI	ATGAA	3 cut(s)	216, 583, 1248
TspGWI	ACGGA	1 cut(s)	516
TspRI	CASTG	2 cut(s)	1104, 1321
VpaK11BI	GGWCC	1 cut(s)	209
XapI	RAATTY	3 cut(s)	47, 301, 1066
XceI	RCATGY	2 cut(s)	1306, 1312
XhoI	CTCGAG	1 cut(s)	1272
XspI	CTAG	2 cut(s)	123, 1424
ZrmI	AGTACT	1 cut(s)	536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.