E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G53410 |
| fragaria_vesca | FvH4_3g32531 FvH4_3g32531 |
| malus_domestica | MD03G1116400.v1.1 MD11G1134600.v1.1 |
| prunus_persica | Prupe.6G100500_v2.0.a1 |
| pyrus_communis | pycom11g11170 |
| rosa_chinensis | RchiOBHm_Chr5g0059601 |
| rosa_laevigata | RLG00000035307 RLG00000035309 |
| rosa_multiflora | Rmu_ssc0000488.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00021010 |
| rosa_rugosa | Rorug05G0323600 |
| rosa_samantha | Rh5AG388600 Rh5BG400200 Rh5CG424500 Rh5DG416500 |
| rosa_wichuraiana | Rw5G036590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 971 |
| AccB1I | GGYRCC | 3 cut(s) | 42, 269, 1133 |
| AccI | GTMKAC | 2 cut(s) | 279, 531 |
| AccIII | TCCGGA | 1 cut(s) | 623 |
| AclWI | GGATC | 1 cut(s) | 187 |
| AcsI | RAATTY | 4 cut(s) | 7, 754, 766, 892 |
| AcuI | CTGAAG | 1 cut(s) | 1127 |
| AcyI | GRCGYC | 1 cut(s) | 1134 |
| AfaI | GTAC | 3 cut(s) | 149, 815, 863 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 27, 242, 350, 630, 1053, 1075 |
| AflIII | ACRYGT | 1 cut(s) | 990 |
| AgsI | TTSAA | 3 cut(s) | 727, 794, 902 |
| AjiI | CACGTC | 1 cut(s) | 400 |
| AjnI | CCWGG | 1 cut(s) | 780 |
| AluBI | AGCT | 4 cut(s) | 299, 561, 868, 1147 |
| AluI | AGCT | 4 cut(s) | 299, 561, 868, 1147 |
| Alw21I | GWGCWC | 2 cut(s) | 334, 358 |
| Alw26I | GTCTC | 2 cut(s) | 168, 957 |
| Alw44I | GTGCAC | 1 cut(s) | 330 |
| AlwI | GGATC | 1 cut(s) | 187 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 841 |
| Ama87I | CYCGRG | 2 cut(s) | 449, 960 |
| Aor13HI | TCCGGA | 1 cut(s) | 623 |
| AoxI | GGCC | 1 cut(s) | 286 |
| ApaI | GGGCCC | 1 cut(s) | 290 |
| ApaLI | GTGCAC | 1 cut(s) | 330 |
| ApeKI | GCWGC | 4 cut(s) | 86, 482, 485, 868 |
| ApoI | RAATTY | 4 cut(s) | 7, 754, 766, 892 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 922 |
| AspLEI | GCGC | 2 cut(s) | 490, 1136 |
| AspS9I | GGNCC | 4 cut(s) | 125, 245, 286, 287 |
| AsuC2I | CCSGG | 7 cut(s) | 28, 216, 243, 274, 450, 451, 492 |
| AsuHPI | GGTGA | 8 cut(s) | 84, 376, 689, 715, 746, 769, 838, 859 |
| AvaI | CYCGRG | 2 cut(s) | 449, 960 |
| AvaII | GGWCC | 2 cut(s) | 125, 245 |
| AxyI | CCTNAGG | 1 cut(s) | 348 |
| BaeGI | GKGCMC | 3 cut(s) | 74, 290, 334 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 131, 164 |
| BanI | GGYRCC | 3 cut(s) | 42, 269, 1133 |
| BanII | GRGCYC | 1 cut(s) | 290 |
| BbsI | GAAGAC | 1 cut(s) | 383 |
| Bbv12I | GWGCWC | 2 cut(s) | 334, 358 |
| BbvI | GCAGC | 4 cut(s) | 73, 469, 472, 855 |
| BccI | CCATC | 3 cut(s) | 159, 725, 743 |
| BceAI | ACGGC | 1 cut(s) | 283 |
| BciT130I | CCWGG | 1 cut(s) | 782 |
| BciVI | GTATCC | 1 cut(s) | 261 |
| BclI | TGATCA | 1 cut(s) | 907 |
| BcnI | CCSGG | 7 cut(s) | 28, 216, 243, 274, 450, 451, 492 |
| BcoDI | GTCTC | 2 cut(s) | 168, 957 |
| BfmI | CTRYAG | 2 cut(s) | 869, 1051 |
| BfoI | RGCGCY | 1 cut(s) | 1137 |
| BfuI | GTATCC | 1 cut(s) | 261 |
| BglII | AGATCT | 1 cut(s) | 876 |
| BisI | GCNGC | 6 cut(s) | 87, 230, 233, 483, 486, 869 |
| BlsI | GCNGC | 6 cut(s) | 88, 231, 234, 484, 487, 870 |
| Bme1390I | CCNGG | 8 cut(s) | 28, 216, 243, 274, 450, 451, 492, 782 |
| Bme18I | GGWCC | 2 cut(s) | 125, 245 |
| BmeT110I | CYCGRG | 2 cut(s) | 449, 960 |
| BmgBI | CACGTC | 1 cut(s) | 400 |
| BmgT120I | GGNCC | 4 cut(s) | 125, 245, 286, 287 |
| BmiI | GGNNCC | 7 cut(s) | 44, 246, 271, 288, 289, 1028, 1135 |
| BmrFI | CCNGG | 8 cut(s) | 28, 216, 243, 274, 450, 451, 492, 782 |
| BmrI | ACTGGG | 3 cut(s) | 139, 193, 639 |
| BmsI | GCATC | 3 cut(s) | 116, 469, 1031 |
| BmuI | ACTGGG | 3 cut(s) | 139, 193, 639 |
| BpiI | GAAGAC | 1 cut(s) | 383 |
| BpmI | CTGGAG | 1 cut(s) | 279 |
| BpuMI | CCSGG | 7 cut(s) | 28, 216, 243, 274, 450, 451, 492 |
| BsaHI | GRCGYC | 1 cut(s) | 1134 |
| BsaJI | CCNNGG | 6 cut(s) | 27, 214, 273, 449, 780, 1014 |
| BsaWI | WCCGGW | 1 cut(s) | 623 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 27, 242, 350, 630, 1053, 1075 |
| Bse118I | RCCGGY | 2 cut(s) | 984, 1068 |
| Bse1I | ACTGG | 4 cut(s) | 145, 199, 634, 1061 |
| Bse21I | CCTNAGG | 1 cut(s) | 348 |
| BseAI | TCCGGA | 1 cut(s) | 623 |
| BseBI | CCWGG | 1 cut(s) | 782 |
| BseDI | CCNNGG | 6 cut(s) | 27, 214, 273, 449, 780, 1014 |
| BseGI | GGATG | 3 cut(s) | 442, 754, 1129 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 27, 242, 350, 630, 1053, 1075 |
| BseMII | CTCAG | 3 cut(s) | 362, 785, 1013 |
| BseNI | ACTGG | 4 cut(s) | 145, 199, 634, 1061 |
| BseRI | GAGGAG | 2 cut(s) | 330, 455 |
| BseSI | GKGCMC | 3 cut(s) | 74, 290, 334 |
| BseXI | GCAGC | 4 cut(s) | 73, 469, 472, 855 |
| BseYI | CCCAGC | 1 cut(s) | 761 |
| BsgI | GTGCAG | 1 cut(s) | 1021 |
| BshFI | GGCC | 1 cut(s) | 288 |
| BshNI | GGYRCC | 3 cut(s) | 42, 269, 1133 |
| BsiHKAI | GWGCWC | 2 cut(s) | 334, 358 |
| BsiHKCI | CYCGRG | 2 cut(s) | 449, 960 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 27, 242, 350, 630, 1053, 1075 |
| BsmAI | GTCTC | 2 cut(s) | 168, 957 |
| BsmBI | CGTCTC | 1 cut(s) | 168 |
| BsnI | GGCC | 1 cut(s) | 288 |
| BsoBI | CYCGRG | 2 cut(s) | 449, 960 |
| Bsp120I | GGGCCC | 1 cut(s) | 286 |
| Bsp1286I | GDGCHC | 4 cut(s) | 74, 290, 334, 358 |
| Bsp13I | TCCGGA | 1 cut(s) | 623 |
| Bsp143I | GATC | 4 cut(s) | 179, 774, 876, 907 |
| BspANI | GGCC | 1 cut(s) | 288 |
| BspCNI | CTCAG | 3 cut(s) | 361, 784, 1014 |
| BspEI | TCCGGA | 1 cut(s) | 623 |
| BspHI | TCATGA | 1 cut(s) | 1107 |
| BspLI | GGNNCC | 7 cut(s) | 44, 246, 271, 288, 289, 1028, 1135 |
| BspMAI | CTGCAG | 1 cut(s) | 873 |
| BspPI | GGATC | 1 cut(s) | 187 |
| BspT107I | GGYRCC | 3 cut(s) | 42, 269, 1133 |
| BsrFI | RCCGGY | 2 cut(s) | 984, 1068 |
| BsrI | ACTGG | 4 cut(s) | 145, 199, 634, 1061 |
| BssAI | RCCGGY | 2 cut(s) | 984, 1068 |
| BssECI | CCNNGG | 6 cut(s) | 27, 214, 273, 449, 780, 1014 |
| BssMI | GATC | 4 cut(s) | 179, 774, 876, 907 |
| BssNI | GRCGYC | 1 cut(s) | 1134 |
| BssT1I | CCWWGG | 1 cut(s) | 1014 |
| Bst2UI | CCWGG | 1 cut(s) | 782 |
| Bst4CI | ACNGT | 6 cut(s) | 382, 505, 536, 580, 843, 973 |
| BstACI | GRCGYC | 1 cut(s) | 1134 |
| BstC8I | GCNNGC | 3 cut(s) | 50, 563, 986 |
| BstDEI | CTNAG | 3 cut(s) | 348, 771, 1022 |
| BstEII | GGTNACC | 1 cut(s) | 382 |
| BstF5I | GGATG | 3 cut(s) | 442, 754, 1129 |
| BstH2I | RGCGCY | 1 cut(s) | 1137 |
| BstHHI | GCGC | 2 cut(s) | 490, 1136 |
| BstKTI | GATC | 4 cut(s) | 182, 777, 879, 910 |
| BstMAI | GTCTC | 2 cut(s) | 168, 957 |
| BstMBI | GATC | 4 cut(s) | 179, 774, 876, 907 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 49, 238 |
| BstNI | CCWGG | 1 cut(s) | 782 |
| BstNSI | RCATGY | 2 cut(s) | 994, 1000 |
| BstPI | GGTNACC | 1 cut(s) | 382 |
| BstSCI | CCNGG | 8 cut(s) | 26, 214, 241, 272, 448, 449, 490, 780 |
| BstSFI | CTRYAG | 2 cut(s) | 869, 1051 |
| BstSLI | GKGCMC | 3 cut(s) | 74, 290, 334 |
| BstV1I | GCAGC | 4 cut(s) | 73, 469, 472, 855 |
| BstV2I | GAAGAC | 1 cut(s) | 383 |
| BstX2I | RGATCY | 1 cut(s) | 876 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 65, 303 |
| BstYI | RGATCY | 1 cut(s) | 876 |
| Bsu36I | CCTNAGG | 1 cut(s) | 348 |
| BsuI | GTATCC | 1 cut(s) | 261 |
| BsuRI | GGCC | 1 cut(s) | 288 |
| BtrI | CACGTC | 1 cut(s) | 400 |
| BtsCI | GGATG | 3 cut(s) | 442, 754, 1129 |
| BtsI | GCAGTG | 1 cut(s) | 1009 |
| BtsIMutI | CAGTG | 2 cut(s) | 585, 1009 |
| Cac8I | GCNNGC | 3 cut(s) | 50, 563, 986 |
| CaiI | CAGNNNCTG | 1 cut(s) | 841 |
| CciI | TCATGA | 1 cut(s) | 1107 |
| CfoI | GCGC | 2 cut(s) | 490, 1136 |
| Cfr10I | RCCGGY | 2 cut(s) | 984, 1068 |
| Cfr13I | GGNCC | 4 cut(s) | 125, 245, 286, 287 |
| Cfr9I | CCCGGG | 1 cut(s) | 449 |
| Csp6I | GTAC | 3 cut(s) | 148, 814, 862 |
| CviAII | CATG | 7 cut(s) | 77, 104, 283, 981, 991, 997, 1108 |
| CviJI | RGCY | 8 cut(s) | 288, 299, 433, 561, 710, 868, 1072, 1147 |
| CviKI_1 | RGCY | 8 cut(s) | 288, 299, 433, 561, 710, 868, 1072, 1147 |
| CviQI | GTAC | 3 cut(s) | 148, 814, 862 |
| DdeI | CTNAG | 3 cut(s) | 348, 771, 1022 |
| DinI | GGCGCC | 1 cut(s) | 1135 |
| DpnI | GATC | 4 cut(s) | 181, 776, 878, 909 |
| DpnII | GATC | 4 cut(s) | 179, 774, 876, 907 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 971 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 971 |
| EciI | GGCGGA | 2 cut(s) | 183, 1136 |
| Eco130I | CCWWGG | 1 cut(s) | 1014 |
| Eco24I | GRGCYC | 1 cut(s) | 290 |
| Eco47I | GGWCC | 2 cut(s) | 125, 245 |
| Eco57I | CTGAAG | 1 cut(s) | 1127 |
| Eco81I | CCTNAGG | 1 cut(s) | 348 |
| Eco88I | CYCGRG | 2 cut(s) | 449, 960 |
| Eco91I | GGTNACC | 1 cut(s) | 382 |
| EcoO109I | RGGNCCY | 1 cut(s) | 287 |
| EcoO65I | GGTNACC | 1 cut(s) | 382 |
| EcoRI | GAATTC | 2 cut(s) | 766, 892 |
| EcoRII | CCWGG | 1 cut(s) | 780 |
| EcoT14I | CCWWGG | 1 cut(s) | 1014 |
| EcoT22I | ATGCAT | 1 cut(s) | 109 |
| EcoT38I | GRGCYC | 1 cut(s) | 290 |
| EgeI | GGCGCC | 1 cut(s) | 1135 |
| EheI | GGCGCC | 1 cut(s) | 1135 |
| ErhI | CCWWGG | 1 cut(s) | 1014 |
| Esp3I | CGTCTC | 1 cut(s) | 168 |
| FaeI | CATG | 7 cut(s) | 80, 107, 286, 984, 994, 1000, 1111 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 545, 577 |
| FatI | CATG | 7 cut(s) | 76, 103, 282, 980, 990, 996, 1107 |
| FauI | CCCGC | 3 cut(s) | 57, 234, 816 |
| FbaI | TGATCA | 1 cut(s) | 907 |
| FblI | GTMKAC | 2 cut(s) | 279, 531 |
| Fnu4HI | GCNGC | 6 cut(s) | 87, 230, 233, 483, 486, 869 |
| FokI | GGATG | 3 cut(s) | 449, 761, 1136 |
| FriOI | GRGCYC | 1 cut(s) | 290 |
| Fsp4HI | GCNGC | 6 cut(s) | 87, 230, 233, 483, 486, 869 |
| GlaI | GCGC | 2 cut(s) | 489, 1135 |
| GluI | GCNGC | 6 cut(s) | 87, 230, 233, 483, 486, 869 |
| GsaI | CCCAGC | 1 cut(s) | 765 |
| GsuI | CTGGAG | 1 cut(s) | 279 |
| HaeII | RGCGCY | 1 cut(s) | 1137 |
| HaeIII | GGCC | 1 cut(s) | 288 |
| HhaI | GCGC | 2 cut(s) | 490, 1136 |
| Hin1I | GRCGYC | 1 cut(s) | 1134 |
| Hin1II | CATG | 7 cut(s) | 80, 107, 286, 984, 994, 1000, 1111 |
| Hin6I | GCGC | 2 cut(s) | 488, 1134 |
| HinP1I | GCGC | 2 cut(s) | 488, 1134 |
| HincII | GTYRAC | 2 cut(s) | 666, 1066 |
| HindII | GTYRAC | 2 cut(s) | 666, 1066 |
| HindIII | AAGCTT | 1 cut(s) | 559 |
| HinfI | GANTC | 7 cut(s) | 131, 219, 416, 445, 713, 923, 1127 |
| HpaI | GTTAAC | 1 cut(s) | 666 |
| HphI | GGTGA | 8 cut(s) | 84, 376, 689, 715, 746, 769, 838, 859 |
| Hpy166II | GTNNAC | 8 cut(s) | 280, 310, 332, 532, 539, 666, 737, 1066 |
| Hpy188I | TCNGA | 4 cut(s) | 375, 774, 955, 1023 |
| Hpy188III | TCNNGA | 6 cut(s) | 409, 624, 962, 1030, 1084, 1108 |
| Hpy8I | GTNNAC | 8 cut(s) | 280, 310, 332, 532, 539, 666, 737, 1066 |
| HpyAV | CCTTC | 4 cut(s) | 630, 700, 727, 793 |
| HpyCH4III | ACNGT | 6 cut(s) | 382, 505, 536, 580, 843, 973 |
| HpyCH4IV | ACGT | 2 cut(s) | 399, 473 |
| HpyCH4V | TGCA | 5 cut(s) | 107, 332, 871, 996, 1002 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 49, 238 |
| HpyF3I | CTNAG | 3 cut(s) | 348, 771, 1022 |
| HpySE526I | ACGT | 2 cut(s) | 399, 473 |
| Hsp92I | GRCGYC | 1 cut(s) | 1134 |
| Hsp92II | CATG | 7 cut(s) | 80, 107, 286, 984, 994, 1000, 1111 |
| HspAI | GCGC | 2 cut(s) | 488, 1134 |
| KasI | GGCGCC | 1 cut(s) | 1133 |
| Kpn2I | TCCGGA | 1 cut(s) | 623 |
| KroI | GCCGGC | 1 cut(s) | 984 |
| KroNI | GCCGGC | 1 cut(s) | 986 |
| Ksp22I | TGATCA | 1 cut(s) | 907 |
| KspAI | GTTAAC | 1 cut(s) | 666 |
| Kzo9I | GATC | 4 cut(s) | 179, 774, 876, 907 |
| LmnI | GCTCC | 1 cut(s) | 361 |
| Lsp1109I | GCAGC | 4 cut(s) | 73, 469, 472, 855 |
| LweI | GCATC | 3 cut(s) | 116, 469, 1031 |
| MaeII | ACGT | 2 cut(s) | 399, 473 |
| MaeIII | GTNAC | 2 cut(s) | 382, 574 |
| MalI | GATC | 4 cut(s) | 181, 776, 878, 909 |
| MboI | GATC | 4 cut(s) | 179, 774, 876, 907 |
| MboII | GAAGA | 3 cut(s) | 196, 388, 536 |
| MflI | RGATCY | 1 cut(s) | 876 |
| MhlI | GDGCHC | 4 cut(s) | 74, 290, 334, 358 |
| MluCI | AATT | 7 cut(s) | 7, 301, 743, 754, 766, 892, 942 |
| Mly113I | GGCGCC | 1 cut(s) | 1134 |
| MlyI | GAGTC | 3 cut(s) | 125, 410, 1121 |
| Mph1103I | ATGCAT | 1 cut(s) | 109 |
| MroI | TCCGGA | 1 cut(s) | 623 |
| MroNI | GCCGGC | 1 cut(s) | 984 |
| MroXI | GAANNNNTTC | 1 cut(s) | 922 |
| MseI | TTAA | 3 cut(s) | 390, 567, 665 |
| MslI | CAYNNNNRTG | 1 cut(s) | 995 |
| MspA1I | CMGCKG | 1 cut(s) | 761 |
| MspR9I | CCNGG | 8 cut(s) | 28, 216, 243, 274, 450, 451, 492, 782 |
| MvaI | CCWGG | 1 cut(s) | 782 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 49, 238 |
| NaeI | GCCGGC | 1 cut(s) | 986 |
| NarI | GGCGCC | 1 cut(s) | 1134 |
| NciI | CCSGG | 7 cut(s) | 28, 216, 243, 274, 450, 451, 492 |
| NdeII | GATC | 4 cut(s) | 179, 774, 876, 907 |
| NgoMIV | GCCGGC | 1 cut(s) | 984 |
| NlaIII | CATG | 7 cut(s) | 80, 107, 286, 984, 994, 1000, 1111 |
| NlaIV | GGNNCC | 7 cut(s) | 44, 246, 271, 288, 289, 1028, 1135 |
| NmuCI | GTSAC | 1 cut(s) | 382 |
| NsiI | ATGCAT | 1 cut(s) | 109 |
| NspI | RCATGY | 2 cut(s) | 994, 1000 |
| PaeR7I | CTCGAG | 1 cut(s) | 960 |
| PagI | TCATGA | 1 cut(s) | 1107 |
| PciI | ACATGT | 1 cut(s) | 990 |
| PdiI | GCCGGC | 1 cut(s) | 986 |
| PdmI | GAANNNNTTC | 1 cut(s) | 922 |
| PfeI | GAWTC | 4 cut(s) | 219, 445, 713, 923 |
| PkrI | GCNGC | 6 cut(s) | 88, 231, 234, 484, 487, 870 |
| PleI | GAGTC | 3 cut(s) | 125, 410, 1121 |
| PluTI | GGCGCC | 1 cut(s) | 1137 |
| PpsI | GAGTC | 3 cut(s) | 125, 410, 1121 |
| PscI | ACATGT | 1 cut(s) | 990 |
| Psp6I | CCWGG | 1 cut(s) | 780 |
| PspEI | GGTNACC | 1 cut(s) | 382 |
| PspFI | CCCAGC | 1 cut(s) | 761 |
| PspGI | CCWGG | 1 cut(s) | 780 |
| PspN4I | GGNNCC | 7 cut(s) | 44, 246, 271, 288, 289, 1028, 1135 |
| PspOMI | GGGCCC | 1 cut(s) | 286 |
| PspPI | GGNCC | 4 cut(s) | 125, 245, 286, 287 |
| PstI | CTGCAG | 1 cut(s) | 873 |
| PstNI | CAGNNNCTG | 1 cut(s) | 841 |
| PsuI | RGATCY | 1 cut(s) | 876 |
| RsaI | GTAC | 3 cut(s) | 149, 815, 863 |
| RsaNI | GTAC | 3 cut(s) | 148, 814, 862 |
| RseI | CAYNNNNRTG | 1 cut(s) | 995 |
| SaqAI | TTAA | 3 cut(s) | 390, 567, 665 |
| SatI | GCNGC | 6 cut(s) | 87, 230, 233, 483, 486, 869 |
| Sau3AI | GATC | 4 cut(s) | 179, 774, 876, 907 |
| Sau96I | GGNCC | 4 cut(s) | 125, 245, 286, 287 |
| SchI | GAGTC | 3 cut(s) | 125, 410, 1121 |
| ScrFI | CCNGG | 8 cut(s) | 28, 216, 243, 274, 450, 451, 492, 782 |
| SduI | GDGCHC | 4 cut(s) | 74, 290, 334, 358 |
| SfaNI | GCATC | 3 cut(s) | 116, 469, 1031 |
| SfcI | CTRYAG | 2 cut(s) | 869, 1051 |
| SfoI | GGCGCC | 1 cut(s) | 1135 |
| Sfr274I | CTCGAG | 1 cut(s) | 960 |
| SinI | GGWCC | 2 cut(s) | 125, 245 |
| SlaI | CTCGAG | 1 cut(s) | 960 |
| SmaI | CCCGGG | 1 cut(s) | 451 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 995 |
| SmlI | CTYRAG | 1 cut(s) | 960 |
| SmoI | CTYRAG | 1 cut(s) | 960 |
| Sse9I | AATT | 7 cut(s) | 7, 301, 743, 754, 766, 892, 942 |
| SspDI | GGCGCC | 1 cut(s) | 1133 |
| StyD4I | CCNGG | 8 cut(s) | 26, 214, 241, 272, 448, 449, 490, 780 |
| StyI | CCWWGG | 1 cut(s) | 1014 |
| TaaI | ACNGT | 6 cut(s) | 382, 505, 536, 580, 843, 973 |
| TaiI | ACGT | 2 cut(s) | 402, 476 |
| TaqI | TCGA | 1 cut(s) | 961 |
| TasI | AATT | 7 cut(s) | 7, 301, 743, 754, 766, 892, 942 |
| TatI | WGTACW | 1 cut(s) | 813 |
| TauI | GCSGC | 2 cut(s) | 232, 235 |
| TfiI | GAWTC | 4 cut(s) | 219, 445, 713, 923 |
| Tru1I | TTAA | 3 cut(s) | 390, 567, 665 |
| Tru9I | TTAA | 3 cut(s) | 390, 567, 665 |
| TscAI | CASTG | 2 cut(s) | 585, 1009 |
| TseFI | GTSAC | 1 cut(s) | 382 |
| TseI | GCWGC | 4 cut(s) | 86, 482, 485, 868 |
| Tsp45I | GTSAC | 1 cut(s) | 382 |
| TspDTI | ATGAA | 2 cut(s) | 845, 1096 |
| TspGWI | ACGGA | 2 cut(s) | 138, 237 |
| TspMI | CCCGGG | 1 cut(s) | 449 |
| TspRI | CASTG | 2 cut(s) | 585, 1009 |
| VneI | GTGCAC | 1 cut(s) | 330 |
| VpaK11BI | GGWCC | 2 cut(s) | 125, 245 |
| XapI | RAATTY | 4 cut(s) | 7, 754, 766, 892 |
| XceI | RCATGY | 2 cut(s) | 994, 1000 |
| XhoI | CTCGAG | 1 cut(s) | 960 |
| XmaI | CCCGGG | 1 cut(s) | 449 |
| XmiI | GTMKAC | 2 cut(s) | 279, 531 |
| XmnI | GAANNNNTTC | 1 cut(s) | 922 |
| Zsp2I | ATGCAT | 1 cut(s) | 109 |