Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0005093

Physical Location & Seq

Genomic Coordinates Reverse (-)

13461109 .. 13462392

Gene Structure 1284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1134800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGCAGTCTCTTCTTCCGCCCTCACCAAACAATCTCACAAGCCCCGCACTCCGCCTCGCCCGCCTCGCCCCCACCCGGCTCCCCGTCTTCAAATGCGCCTACCGCTCCGACTCCGTCCACTTCCCCAACGGCGTCGGCTCCAGTCGCGCCGACTGGCAGAGCTCCTGCGCCATTCTTGCCAGCAACGTCGTCTCCCAGCAACCCCATACCCCCTCCGACAAATCCGGAACCGCTGACCATGTTGCCTCCGTCAACGGCCACAAGACCTCCGTTGACCTCGATATTGTCCCCATCGAAAAGCTCGAAGACGACAAGTCGATTTCCCCGCCTCCGCCTCCCAGGGCACTCACCATCACCGACTACTCTCCAGCTCCTATGCACGGCTCCCAGCTGCGCGTGGCCTACCAAGGCGTCCCCGGCGCGTACTCCGAAGCCGCCGCCGGCAAAGCCTACCCGAAATGCGAGGCCATCCCCTGTGACCAATTCGAAGTCGCCTTCCAGGCCGTCGAGCTCTGGATCGCCGATCGAGCAGTTTTGCCGGTCGAAAACTCCCTCGGCGGCTCAATTCACCGTAATTACGATCTCCTCCTCCGCCACCGCCTCCACATCGTTGGAGAAGTCCAGCTCCCGGTCCACCACTGCCTCTTAGCCCTCCCCGGAGTCCGAAAGGAGTACTTGAACCGAGTCATCTCGCATCCCCAAGCCTTAGCTCAATGCGAGCTGACTCTCACCAAACTCGGCCTCAACGTCGCCCGCGAGGCCGTCGACGATACCGCCGGCGCGGCCGAGTTCGTCGCGGCCAACAACCTTCGCGACACGGCAGCGATAGCCTCCGCGCGAGCCGCCGAGCTCTACGGCATGGAGATCTTGGAGAACGGGATCCAGGACGACTCGAGCAACGTGACCCGCTTCGTGATGCTGGCCCGGGAGCCGATCATCCCCCGTACGGACCGGCCGTTCAAGACGAGCATCGTCTTCGCGCACGACAAGGGGACGTCGGTGCTGTTCAAGGTCCTATCGGCGTTCGCCTTCCGGAACATCAGCCTGACGAAGATAGAGTCGCGGCCGCACCGGAACCGTCCGATCAGGCTGGTGAGCGATTCGAACGAGGGGACGGCGAAGCACTTCGAGTACCTGTTCTACGTGGACTTCGAGGCATCGATGGCGGAGGTCAGGGCACAGAACGCGCTGGCGGAGGTGCAGGAGTTCACGTCCTTCTTAAGGGTCCTGGGAAGCTACCCCATGGACATGACTTCTTGGAGTCCTTCCAGGGGGGGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009987 GO:0010244 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0017144 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0047769 GO:0050896 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902221 GO:1902223

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PDT

Protein Analysis

428

Amino Acids

46.7

Weight (kDa)

6.4

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDT	PF00800	133 - 310	4.2e-59	Prephenate dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08250 AT2G27820 AT3G44720 AT5G22630
fragaria_vesca	FvH4_3g29870
malus_domestica	MD03G1134800.v1.1 MD11G1157600.v1.1
prunus_persica	Prupe.6G119200_v2.0.a1
pyrus_communis	pycom03g09080 pycom11g12770
rosa_chinensis	RchiOBHm_Chr5g0055201 RchiOBHm_Chr7g0203231
rosa_laevigata	RLG00000034973
rosa_multiflora	Rmu_sc0000994.1_g000007 Rmu_sc0010754.1_g000003 Rmu_sc0011582.1_g000002 Rmu_sc0018729.1_g000008
rosa_roxburghii	Rroxscaffold_1G00025130
rosa_rugosa	Rorug05G0291700 Rorug07G0075300.1
rosa_samantha	Rh5AG361500 Rh5BG372900 Rh5CG394800 Rh5DG386300 Rh7AG204600 Rh7BG203800 Rh7CG215600 Rh7DG211200
rosa_wichuraiana	Rw5G033990 Rw7G017810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	998
AccBSI	CCGCTC	1 cut(s)	105
AccI	GTMKAC	1 cut(s)	765
AccIII	TCCGGA	2 cut(s)	224, 1032
AclWI	GGATC	3 cut(s)	524, 874, 887
AcoI	YGGCCR	5 cut(s)	256, 783, 798, 953, 1064
AcyI	GRCGYC	3 cut(s)	132, 411, 995
AfaI	GTAC	4 cut(s)	425, 674, 946, 1133
AfiI	CCNNNNNNNGG	6 cut(s)	75, 380, 628, 946, 1221, 1271
AflII	CTTAAG	1 cut(s)	1219
AgsI	TTSAA	4 cut(s)	91, 679, 961, 1009
AhdI	GACNNNNNGTC	1 cut(s)	313
AjiI	CACGTC	1 cut(s)	1212
AjnI	CCWGG	5 cut(s)	338, 498, 882, 1227, 1268
AloI	GAACNNNNNNTCC	2 cut(s)	941, 973
Alw21I	GWGCWC	3 cut(s)	164, 513, 852
Alw26I	GTCTC	2 cut(s)	12, 196
AlwI	GGATC	3 cut(s)	524, 874, 887
Ama87I	CYCGRG	2 cut(s)	892, 924
Aor13HI	TCCGGA	2 cut(s)	224, 1032
ApeKI	GCWGC	2 cut(s)	391, 821
ArsI	GACNNNNNNTTYG	2 cut(s)	1043, 1075
Asp700I	GAANNNNTTC	1 cut(s)	1124
AspLEI	GCGC	9 cut(s)	98, 149, 170, 396, 422, 782, 838, 982, 1189
AspS9I	GGNCC	5 cut(s)	631, 922, 949, 1012, 1225
AsuC2I	CCSGG	6 cut(s)	76, 417, 629, 657, 925, 926
AsuHPI	GGTGA	6 cut(s)	15, 340, 346, 560, 721, 1105
AsuII	TTCGAA	2 cut(s)	486, 1103
AvaI	CYCGRG	2 cut(s)	892, 924
AvaII	GGWCC	4 cut(s)	631, 949, 1012, 1225
BaeGI	GKGCMC	2 cut(s)	346, 1180
BamHI	GGATCC	1 cut(s)	879
BanII	GRGCYC	3 cut(s)	164, 513, 852
BbsI	GAAGAC	3 cut(s)	79, 312, 967
Bbv12I	GWGCWC	3 cut(s)	164, 513, 852
BbvI	GCAGC	2 cut(s)	378, 833
BccI	CCATC	4 cut(s)	299, 359, 476, 1156
BceAI	ACGGC	9 cut(s)	145, 271, 397, 488, 746, 834, 871, 940, 1131
BcgI	CGANNNNNNTGC	2 cut(s)	958, 992
BciT130I	CCWGG	5 cut(s)	340, 500, 884, 1229, 1270
BcnI	CCSGG	6 cut(s)	76, 417, 629, 657, 925, 926
BcoDI	GTCTC	2 cut(s)	12, 196
BfrI	CTTAAG	1 cut(s)	1219
BglI	GCCNNNNNGGC	3 cut(s)	500, 758, 782
BglII	AGATCT	1 cut(s)	864
BmcAI	AGTACT	1 cut(s)	674
Bme18I	GGWCC	4 cut(s)	631, 949, 1012, 1225
BmeRI	GACNNNNNGTC	1 cut(s)	313
BmeT110I	CYCGRG	2 cut(s)	892, 924
BmgBI	CACGTC	1 cut(s)	1212
BmgT120I	GGNCC	5 cut(s)	631, 922, 949, 1012, 1225
BmiI	GGNNCC	8 cut(s)	80, 139, 229, 385, 881, 930, 1076, 1226
BmsI	GCATC	4 cut(s)	703, 906, 978, 1166
BpiI	GAAGAC	3 cut(s)	79, 312, 967
BpmI	CTGGAG	2 cut(s)	124, 351
Bpu10I	CCTNAGC	1 cut(s)	706
Bpu14I	TTCGAA	2 cut(s)	486, 1103
BpuMI	CCSGG	6 cut(s)	76, 417, 629, 657, 925, 926
Bsa29I	ATCGAT	1 cut(s)	1160
BsaAI	YACGTR	1 cut(s)	1144
BsaHI	GRCGYC	3 cut(s)	132, 411, 995
BsaWI	WCCGGW	3 cut(s)	224, 1032, 1071
BsaXI	ACNNNNNCTCC	6 cut(s)	176, 206, 251, 281, 1196, 1226
Bsc4I	CCNNNNNNNGG	6 cut(s)	75, 380, 628, 946, 1221, 1271
Bse118I	RCCGGY	4 cut(s)	440, 538, 776, 951
Bse1I	ACTGG	2 cut(s)	141, 158
BseAI	TCCGGA	2 cut(s)	224, 1032
BseBI	CCWGG	5 cut(s)	340, 500, 884, 1229, 1270
BseCI	ATCGAT	1 cut(s)	1160
BseGI	GGATG	3 cut(s)	468, 694, 936
BseLI	CCNNNNNNNGG	6 cut(s)	75, 380, 628, 946, 1221, 1271
BseNI	ACTGG	2 cut(s)	141, 158
BseRI	GAGGAG	2 cut(s)	575, 578
BseSI	GKGCMC	2 cut(s)	346, 1180
BseX3I	CGGCCG	3 cut(s)	783, 953, 1064
BseXI	GCAGC	2 cut(s)	378, 833
BseYI	CCCAGC	2 cut(s)	195, 387
BsgI	GTGCAG	1 cut(s)	1220
Bsh1285I	CGRYCG	5 cut(s)	526, 543, 786, 956, 1067
BshVI	ATCGAT	1 cut(s)	1160
BsiEI	CGRYCG	5 cut(s)	526, 543, 786, 956, 1067
BsiHKAI	GWGCWC	3 cut(s)	164, 513, 852
BsiHKCI	CYCGRG	2 cut(s)	892, 924
BsiWI	CGTACG	1 cut(s)	944
BslFI	GGGAC	4 cut(s)	272, 398, 1006, 1126
BslI	CCNNNNNNNGG	6 cut(s)	75, 380, 628, 946, 1221, 1271
BsmAI	GTCTC	2 cut(s)	12, 196
BsmBI	CGTCTC	1 cut(s)	196
BsmFI	GGGAC	4 cut(s)	272, 398, 1006, 1126
BsoBI	CYCGRG	2 cut(s)	892, 924
Bsp119I	TTCGAA	2 cut(s)	486, 1103
Bsp1286I	GDGCHC	5 cut(s)	164, 346, 513, 852, 1180
Bsp13I	TCCGGA	2 cut(s)	224, 1032
Bsp143I	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
Bsp19I	CCATGG	1 cut(s)	1242
Bsp68I	TCGCGA	1 cut(s)	813
BspDI	ATCGAT	1 cut(s)	1160
BspEI	TCCGGA	2 cut(s)	224, 1032
BspLI	GGNNCC	8 cut(s)	80, 139, 229, 385, 881, 930, 1076, 1226
BspPI	GGATC	3 cut(s)	524, 874, 887
BspT104I	TTCGAA	2 cut(s)	486, 1103
BspTI	CTTAAG	1 cut(s)	1219
BsrBI	CCGCTC	1 cut(s)	105
BsrFI	RCCGGY	4 cut(s)	440, 538, 776, 951
BsrI	ACTGG	2 cut(s)	141, 158
BssAI	RCCGGY	4 cut(s)	440, 538, 776, 951
BssMI	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
BssNI	GRCGYC	3 cut(s)	132, 411, 995
BssT1I	CCWWGG	2 cut(s)	406, 1242
Bst2UI	CCWGG	5 cut(s)	340, 500, 884, 1229, 1270
Bst4CI	ACNGT	2 cut(s)	572, 1079
Bst6I	CTCTTC	1 cut(s)	15
BstACI	GRCGYC	3 cut(s)	132, 411, 995
BstAFI	CTTAAG	1 cut(s)	1219
BstBAI	YACGTR	1 cut(s)	1144
BstBI	TTCGAA	2 cut(s)	486, 1103
BstC8I	GCNNGC	9 cut(s)	61, 181, 442, 719, 754, 778, 840, 921, 1191
BstDEI	CTNAG	2 cut(s)	646, 706
BstDSI	CCRYGG	1 cut(s)	1242
BstENI	CCTNNNNNAGG	1 cut(s)	1219
BstF5I	GGATG	3 cut(s)	468, 694, 936
BstHHI	GCGC	9 cut(s)	98, 149, 170, 396, 422, 782, 838, 982, 1189
BstKTI	GATC	7 cut(s)	519, 526, 583, 867, 882, 936, 1086
BstMAI	GTCTC	2 cut(s)	12, 196
BstMBI	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
BstMCI	CGRYCG	5 cut(s)	526, 543, 786, 956, 1067
BstNI	CCWGG	5 cut(s)	340, 500, 884, 1229, 1270
BstSLI	GKGCMC	2 cut(s)	346, 1180
BstV1I	GCAGC	2 cut(s)	378, 833
BstV2I	GAAGAC	3 cut(s)	79, 312, 967
BstX2I	RGATCY	2 cut(s)	864, 879
BstXI	CCANNNNNNTGG	1 cut(s)	611
BstYI	RGATCY	2 cut(s)	864, 879
BstZI	CGGCCG	3 cut(s)	783, 953, 1064
Bsu15I	ATCGAT	1 cut(s)	1160
BsuTUI	ATCGAT	1 cut(s)	1160
BtgI	CCRYGG	1 cut(s)	1242
BtrI	CACGTC	1 cut(s)	1212
BtsCI	GGATG	3 cut(s)	468, 694, 936
BtsI	GCAGTG	1 cut(s)	637
BtsIMutI	CAGTG	1 cut(s)	637
BtuMI	TCGCGA	1 cut(s)	813
Cac8I	GCNNGC	9 cut(s)	61, 181, 442, 719, 754, 778, 840, 921, 1191
CciNI	GCGGCCGC	1 cut(s)	1064
CfoI	GCGC	9 cut(s)	98, 149, 170, 396, 422, 782, 838, 982, 1189
Cfr10I	RCCGGY	4 cut(s)	440, 538, 776, 951
Cfr13I	GGNCC	5 cut(s)	631, 922, 949, 1012, 1225
Cfr9I	CCCGGG	1 cut(s)	924
ClaI	ATCGAT	1 cut(s)	1160
CpoI	CGGWCCG	1 cut(s)	949
CseI	GACGC	2 cut(s)	121, 400
Csp6I	GTAC	4 cut(s)	424, 673, 945, 1132
CspI	CGGWCCG	1 cut(s)	949
CviAII	CATG	4 cut(s)	239, 859, 1243, 1249
CviQI	GTAC	4 cut(s)	424, 673, 945, 1132
DdeI	CTNAG	2 cut(s)	646, 706
DpnI	GATC	7 cut(s)	518, 525, 582, 866, 881, 935, 1085
DpnII	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
DriI	GACNNNNNGTC	1 cut(s)	313
EaeI	YGGCCR	5 cut(s)	256, 783, 798, 953, 1064
EagI	CGGCCG	3 cut(s)	783, 953, 1064
Eam1104I	CTCTTC	1 cut(s)	15
Eam1105I	GACNNNNNGTC	1 cut(s)	313
EarI	CTCTTC	1 cut(s)	15
EciI	GGCGGA	6 cut(s)	6, 41, 321, 581, 1181, 1208
Ecl136II	GAGCTC	3 cut(s)	162, 511, 850
EclXI	CGGCCG	3 cut(s)	783, 953, 1064
Eco130I	CCWWGG	2 cut(s)	406, 1242
Eco24I	GRGCYC	3 cut(s)	164, 513, 852
Eco47I	GGWCC	4 cut(s)	631, 949, 1012, 1225
Eco52I	CGGCCG	3 cut(s)	783, 953, 1064
Eco53kI	GAGCTC	3 cut(s)	162, 511, 850
Eco88I	CYCGRG	2 cut(s)	892, 924
EcoICRI	GAGCTC	3 cut(s)	162, 511, 850
EcoNI	CCTNNNNNAGG	1 cut(s)	1219
EcoO109I	RGGNCCY	2 cut(s)	1012, 1225
EcoRII	CCWGG	5 cut(s)	338, 498, 882, 1227, 1268
EcoT14I	CCWWGG	2 cut(s)	406, 1242
EcoT38I	GRGCYC	3 cut(s)	164, 513, 852
ErhI	CCWWGG	2 cut(s)	406, 1242
Esp3I	CGTCTC	1 cut(s)	196
FaeI	CATG	4 cut(s)	242, 862, 1246, 1252
FaiI	YATR	6 cut(s)	207, 240, 377, 860, 1244, 1250
FalI	AAGNNNNNCTT	2 cut(s)	659, 691
FaqI	GGGAC	4 cut(s)	272, 398, 1006, 1126
FatI	CATG	4 cut(s)	238, 858, 1242, 1248
FauI	CCCGC	5 cut(s)	52, 68, 333, 761, 914
FblI	GTMKAC	1 cut(s)	765
FokI	GGATG	3 cut(s)	455, 681, 923
FriOI	GRGCYC	3 cut(s)	164, 513, 852
GlaI	GCGC	9 cut(s)	97, 148, 169, 395, 421, 781, 837, 981, 1188
GsaI	CCCAGC	2 cut(s)	199, 391
GsuI	CTGGAG	2 cut(s)	124, 351
HgaI	GACGC	2 cut(s)	121, 400
HhaI	GCGC	9 cut(s)	98, 149, 170, 396, 422, 782, 838, 982, 1189
Hin1I	GRCGYC	3 cut(s)	132, 411, 995
Hin1II	CATG	4 cut(s)	242, 862, 1246, 1252
Hin6I	GCGC	9 cut(s)	96, 147, 168, 394, 420, 780, 836, 980, 1187
HinP1I	GCGC	9 cut(s)	96, 147, 168, 394, 420, 780, 836, 980, 1187
HincII	GTYRAC	3 cut(s)	253, 274, 766
HindII	GTYRAC	3 cut(s)	253, 274, 766
HinfI	GANTC	8 cut(s)	110, 660, 684, 724, 890, 1058, 1100, 1261
HphI	GGTGA	6 cut(s)	15, 340, 346, 560, 721, 1105
Hpy166II	GTNNAC	7 cut(s)	118, 253, 274, 634, 766, 1147, 1209
Hpy188I	TCNGA	5 cut(s)	109, 217, 430, 665, 1083
Hpy188III	TCNNGA	6 cut(s)	225, 514, 812, 913, 961, 1033
Hpy8I	GTNNAC	7 cut(s)	118, 253, 274, 634, 766, 1147, 1209
Hpy99I	CGWCG	8 cut(s)	137, 191, 509, 752, 767, 770, 797, 1000
HpyAV	CCTTC	5 cut(s)	505, 818, 1039, 1225, 1275
HpyCH4III	ACNGT	2 cut(s)	572, 1079
HpyCH4IV	ACGT	6 cut(s)	186, 747, 900, 995, 1143, 1211
HpyCH4V	TGCA	3 cut(s)	4, 379, 1201
HpyF3I	CTNAG	2 cut(s)	646, 706
HpySE526I	ACGT	6 cut(s)	186, 747, 900, 995, 1143, 1211
Hsp92I	GRCGYC	3 cut(s)	132, 411, 995
Hsp92II	CATG	4 cut(s)	242, 862, 1246, 1252
HspAI	GCGC	9 cut(s)	96, 147, 168, 394, 420, 780, 836, 980, 1187
Kpn2I	TCCGGA	2 cut(s)	224, 1032
KroI	GCCGGC	2 cut(s)	440, 776
KroNI	GCCGGC	2 cut(s)	442, 778
Kzo9I	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
LmnI	GCTCC	8 cut(s)	84, 110, 143, 167, 376, 389, 630, 928
Lsp1109I	GCAGC	2 cut(s)	378, 833
LweI	GCATC	4 cut(s)	703, 906, 978, 1166
MaeII	ACGT	6 cut(s)	186, 747, 900, 995, 1143, 1211
MaeIII	GTNAC	2 cut(s)	476, 901
MalI	GATC	7 cut(s)	518, 525, 582, 866, 881, 935, 1085
MbiI	CCGCTC	1 cut(s)	105
MboI	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
MboII	GAAGA	5 cut(s)	5, 79, 317, 967, 1063
MflI	RGATCY	2 cut(s)	864, 879
MhlI	GDGCHC	5 cut(s)	164, 346, 513, 852, 1180
MluCI	AATT	3 cut(s)	482, 564, 574
MlyI	GAGTC	7 cut(s)	104, 669, 693, 718, 884, 1067, 1270
MmeI	TCCRAC	3 cut(s)	132, 240, 592
MreI	CGCCGGCG	1 cut(s)	776
MroI	TCCGGA	2 cut(s)	224, 1032
MroNI	GCCGGC	2 cut(s)	440, 776
MroXI	GAANNNNTTC	1 cut(s)	1124
MseI	TTAA	1 cut(s)	1220
MslI	CAYNNNNRTG	1 cut(s)	1247
MspA1I	CMGCKG	2 cut(s)	233, 391
MspCI	CTTAAG	1 cut(s)	1219
MvaI	CCWGG	5 cut(s)	340, 500, 884, 1229, 1270
NaeI	GCCGGC	2 cut(s)	442, 778
NciI	CCSGG	6 cut(s)	76, 417, 629, 657, 925, 926
NcoI	CCATGG	1 cut(s)	1242
NdeII	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
NgoMIV	GCCGGC	2 cut(s)	440, 776
NlaIII	CATG	4 cut(s)	242, 862, 1246, 1252
NlaIV	GGNNCC	8 cut(s)	80, 139, 229, 385, 881, 930, 1076, 1226
NmeAIII	GCCGAG	4 cut(s)	534, 717, 811, 871
NmuCI	GTSAC	2 cut(s)	476, 901
NotI	GCGGCCGC	1 cut(s)	1064
NruI	TCGCGA	1 cut(s)	813
NspV	TTCGAA	2 cut(s)	486, 1103
PaeR7I	CTCGAG	1 cut(s)	892
PasI	CCCWGGG	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	5 cut(s)	300, 744, 753, 953, 1149
PdiI	GCCGGC	2 cut(s)	442, 778
PdmI	GAANNNNTTC	1 cut(s)	1124
PfeI	GAWTC	1 cut(s)	1100
Pfl23II	CGTACG	1 cut(s)	944
PflFI	GACNNNGTC	1 cut(s)	113
PfoI	TCCNGGA	1 cut(s)	882
Ple19I	CGATCG	1 cut(s)	526
PleI	GAGTC	7 cut(s)	104, 668, 692, 718, 884, 1066, 1269
PpsI	GAGTC	7 cut(s)	104, 668, 692, 718, 884, 1066, 1269
Ppu21I	YACGTR	1 cut(s)	1144
PpuMI	RGGWCCY	2 cut(s)	1012, 1225
Psp124BI	GAGCTC	3 cut(s)	164, 513, 852
Psp5II	RGGWCCY	2 cut(s)	1012, 1225
Psp6I	CCWGG	5 cut(s)	338, 498, 882, 1227, 1268
PspFI	CCCAGC	2 cut(s)	195, 387
PspGI	CCWGG	5 cut(s)	338, 498, 882, 1227, 1268
PspLI	CGTACG	1 cut(s)	944
PspN4I	GGNNCC	8 cut(s)	80, 139, 229, 385, 881, 930, 1076, 1226
PspPI	GGNCC	5 cut(s)	631, 922, 949, 1012, 1225
PspPPI	RGGWCCY	2 cut(s)	1012, 1225
PspXI	VCTCGAGB	1 cut(s)	892
PsuI	RGATCY	2 cut(s)	864, 879
PsyI	GACNNNGTC	1 cut(s)	113
PvuI	CGATCG	1 cut(s)	526
PvuII	CAGCTG	1 cut(s)	391
RruI	TCGCGA	1 cut(s)	813
RsaI	GTAC	4 cut(s)	425, 674, 946, 1133
RsaNI	GTAC	4 cut(s)	424, 673, 945, 1132
RseI	CAYNNNNRTG	1 cut(s)	1247
Rsr2I	CGGWCCG	1 cut(s)	949
RsrII	CGGWCCG	1 cut(s)	949
SacI	GAGCTC	3 cut(s)	164, 513, 852
SalI	GTCGAC	1 cut(s)	764
SaqAI	TTAA	1 cut(s)	1220
Sau3AI	GATC	7 cut(s)	516, 523, 580, 864, 879, 933, 1083
Sau96I	GGNCC	5 cut(s)	631, 922, 949, 1012, 1225
ScaI	AGTACT	1 cut(s)	674
SchI	GAGTC	7 cut(s)	104, 669, 693, 718, 884, 1067, 1270
SduI	GDGCHC	5 cut(s)	164, 346, 513, 852, 1180
SfaNI	GCATC	4 cut(s)	703, 906, 978, 1166
Sfr274I	CTCGAG	1 cut(s)	892
SfuI	TTCGAA	2 cut(s)	486, 1103
SgrAI	CRCCGGYG	1 cut(s)	776
SgrDI	CGTCGACG	1 cut(s)	764
SinI	GGWCC	4 cut(s)	631, 949, 1012, 1225
SlaI	CTCGAG	1 cut(s)	892
SmaI	CCCGGG	1 cut(s)	926
SmiMI	CAYNNNNRTG	1 cut(s)	1247
SmlI	CTYRAG	2 cut(s)	892, 1219
SmoI	CTYRAG	2 cut(s)	892, 1219
Sse9I	AATT	3 cut(s)	482, 564, 574
SstI	GAGCTC	3 cut(s)	164, 513, 852
StyI	CCWWGG	2 cut(s)	406, 1242
TaaI	ACNGT	2 cut(s)	572, 1079
TaiI	ACGT	6 cut(s)	189, 750, 903, 998, 1146, 1214
TasI	AATT	3 cut(s)	482, 564, 574
TatI	WGTACW	1 cut(s)	672
TauI	GCSGC	8 cut(s)	437, 440, 561, 785, 800, 845, 1066, 1069
TfiI	GAWTC	1 cut(s)	1100
Tru1I	TTAA	1 cut(s)	1220
Tru9I	TTAA	1 cut(s)	1220
TscAI	CASTG	1 cut(s)	644
TseFI	GTSAC	2 cut(s)	476, 901
TseI	GCWGC	2 cut(s)	391, 821
Tsp45I	GTSAC	2 cut(s)	476, 901
TspGWI	ACGGA	4 cut(s)	103, 238, 259, 962
TspMI	CCCGGG	1 cut(s)	924
TspRI	CASTG	1 cut(s)	644
Tth111I	GACNNNGTC	1 cut(s)	113
Vha464I	CTTAAG	1 cut(s)	1219
VpaK11BI	GGWCC	4 cut(s)	631, 949, 1012, 1225
XagI	CCTNNNNNAGG	1 cut(s)	1219
XhoI	CTCGAG	1 cut(s)	892
XmaI	CCCGGG	1 cut(s)	924
XmiI	GTMKAC	1 cut(s)	765
XmnI	GAANNNNTTC	1 cut(s)	1124
ZraI	GACGTC	1 cut(s)	996
ZrmI	AGTACT	1 cut(s)	674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.