Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08250 AT2G27820 AT3G44720 AT5G22630 |
| fragaria_vesca | FvH4_3g29870 |
| malus_domestica | MD03G1134800.v1.1 MD11G1157600.v1.1 |
| prunus_persica | Prupe.6G119200_v2.0.a1 |
| pyrus_communis | pycom03g09080 pycom11g12770 |
| rosa_chinensis | RchiOBHm_Chr5g0055201 RchiOBHm_Chr7g0203231 |
| rosa_laevigata | RLG00000034973 |
| rosa_multiflora | Rmu_sc0000994.1_g000007 Rmu_sc0010754.1_g000003 Rmu_sc0011582.1_g000002 Rmu_sc0018729.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00025130 |
| rosa_rugosa | Rorug05G0291700 Rorug07G0075300.1 |
| rosa_samantha | Rh5AG361500 Rh5BG372900 Rh5CG394800 Rh5DG386300 Rh7AG204600 Rh7BG203800 Rh7CG215600 Rh7DG211200 |
| rosa_wichuraiana | Rw5G033990 Rw7G017810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 66, 1279 |
| AccI | GTMKAC | 1 cut(s) | 786 |
| AccII | CGCG | 9 cut(s) | 153, 417, 443, 773, 775, 777, 834, 861, 1208 |
| AclI | AACGTT | 1 cut(s) | 276 |
| AclWI | GGATC | 5 cut(s) | 545, 880, 895, 908, 978 |
| AcoI | YGGCCR | 2 cut(s) | 262, 974 |
| AcsI | RAATTY | 1 cut(s) | 1226 |
| AcuI | CTGAAG | 1 cut(s) | 1036 |
| AcyI | GRCGYC | 2 cut(s) | 117, 432 |
| AfaI | GTAC | 5 cut(s) | 446, 695, 875, 1023, 1154 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 388, 401, 649, 678, 679, 1292 |
| AflIII | ACRYGT | 1 cut(s) | 1206 |
| AgsI | TTSAA | 3 cut(s) | 700, 982, 1030 |
| AjiI | CACGTC | 2 cut(s) | 247, 1233 |
| AjnI | CCWGG | 6 cut(s) | 426, 676, 879, 888, 903, 1289 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 962, 994 |
| AluBI | AGCT | 9 cut(s) | 168, 307, 412, 532, 646, 725, 871, 1065, 1257 |
| AluI | AGCT | 9 cut(s) | 168, 307, 412, 532, 646, 725, 871, 1065, 1257 |
| Alw21I | GWGCWC | 2 cut(s) | 170, 534 |
| Alw26I | GTCTC | 5 cut(s) | 74, 89, 202, 887, 1287 |
| AlwI | GGATC | 5 cut(s) | 545, 880, 895, 908, 978 |
| Ama87I | CYCGRG | 3 cut(s) | 360, 913, 945 |
| ApaI | GGGCCC | 1 cut(s) | 367 |
| ApeKI | GCWGC | 4 cut(s) | 205, 409, 412, 818 |
| ApoI | RAATTY | 1 cut(s) | 1226 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1064, 1096 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1145 |
| AspLEI | GCGC | 8 cut(s) | 104, 155, 176, 417, 443, 775, 777, 863 |
| AspS9I | GGNCC | 7 cut(s) | 7, 363, 364, 640, 652, 1014, 1033 |
| AsuC2I | CCSGG | 6 cut(s) | 231, 361, 362, 389, 438, 650 |
| AsuHPI | GGTGA | 6 cut(s) | 55, 338, 361, 367, 581, 1126 |
| AsuII | TTCGAA | 3 cut(s) | 507, 1124, 1173 |
| AvaI | CYCGRG | 3 cut(s) | 360, 913, 945 |
| AvaII | GGWCC | 4 cut(s) | 640, 652, 1014, 1033 |
| BaeGI | GKGCMC | 2 cut(s) | 367, 1201 |
| BamHI | GGATCC | 1 cut(s) | 900 |
| BanII | GRGCYC | 3 cut(s) | 170, 367, 534 |
| Bbv12I | GWGCWC | 2 cut(s) | 170, 534 |
| BbvI | GCAGC | 4 cut(s) | 217, 399, 421, 805 |
| BccI | CCATC | 3 cut(s) | 305, 380, 497 |
| BciT130I | CCWGG | 6 cut(s) | 428, 678, 881, 890, 905, 1291 |
| BcnI | CCSGG | 6 cut(s) | 231, 361, 362, 389, 438, 650 |
| BcoDI | GTCTC | 5 cut(s) | 74, 89, 202, 887, 1287 |
| BfaI | CTAG | 1 cut(s) | 290 |
| BmcAI | AGTACT | 1 cut(s) | 695 |
| Bme18I | GGWCC | 4 cut(s) | 640, 652, 1014, 1033 |
| BmeT110I | CYCGRG | 3 cut(s) | 360, 913, 945 |
| BmgBI | CACGTC | 2 cut(s) | 247, 1233 |
| BmgT120I | GGNCC | 7 cut(s) | 7, 363, 364, 640, 652, 1014, 1033 |
| BmiI | GGNNCC | 9 cut(s) | 145, 235, 365, 393, 802, 902, 951, 1015, 1097 |
| BmrI | ACTGGG | 1 cut(s) | 906 |
| BmsI | GCATC | 5 cut(s) | 147, 387, 724, 927, 999 |
| BmuI | ACTGGG | 1 cut(s) | 906 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 293, 325 |
| BpmI | CTGGAG | 4 cut(s) | 130, 819, 902, 911 |
| Bpu14I | TTCGAA | 3 cut(s) | 507, 1124, 1173 |
| BpuEI | CTTGAG | 2 cut(s) | 705, 1261 |
| BpuMI | CCSGG | 6 cut(s) | 231, 361, 362, 389, 438, 650 |
| BsaHI | GRCGYC | 2 cut(s) | 117, 432 |
| BsaI | GGTCTC | 1 cut(s) | 1287 |
| BsaWI | WCCGGW | 3 cut(s) | 323, 839, 1092 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 182, 212 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 388, 401, 649, 678, 679, 1292 |
| Bse118I | RCCGGY | 2 cut(s) | 461, 559 |
| Bse1I | ACTGG | 3 cut(s) | 164, 502, 901 |
| BseBI | CCWGG | 6 cut(s) | 428, 678, 881, 890, 905, 1291 |
| BseGI | GGATG | 2 cut(s) | 489, 715 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 388, 401, 649, 678, 679, 1292 |
| BseMII | CTCAG | 1 cut(s) | 746 |
| BseNI | ACTGG | 3 cut(s) | 164, 502, 901 |
| BsePI | GCGCGC | 1 cut(s) | 773 |
| BseRI | GAGGAG | 7 cut(s) | 13, 301, 304, 307, 310, 599, 656 |
| BseSI | GKGCMC | 2 cut(s) | 367, 1201 |
| BseX3I | CGGCCG | 1 cut(s) | 974 |
| BseXI | GCAGC | 4 cut(s) | 217, 399, 421, 805 |
| BseYI | CCCAGC | 2 cut(s) | 201, 210 |
| Bsh1236I | CGCG | 9 cut(s) | 153, 417, 443, 773, 775, 777, 834, 861, 1208 |
| Bsh1285I | CGRYCG | 3 cut(s) | 547, 564, 977 |
| BsiEI | CGRYCG | 3 cut(s) | 547, 564, 977 |
| BsiHKAI | GWGCWC | 2 cut(s) | 170, 534 |
| BsiHKCI | CYCGRG | 3 cut(s) | 360, 913, 945 |
| BslFI | GGGAC | 5 cut(s) | 35, 278, 419, 1027, 1147 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 388, 401, 649, 678, 679, 1292 |
| BsmAI | GTCTC | 5 cut(s) | 74, 89, 202, 887, 1287 |
| BsmBI | CGTCTC | 3 cut(s) | 74, 89, 202 |
| BsmFI | GGGAC | 5 cut(s) | 35, 278, 419, 1027, 1147 |
| Bso31I | GGTCTC | 1 cut(s) | 1287 |
| BsoBI | CYCGRG | 3 cut(s) | 360, 913, 945 |
| Bsp119I | TTCGAA | 3 cut(s) | 507, 1124, 1173 |
| Bsp120I | GGGCCC | 1 cut(s) | 363 |
| Bsp1286I | GDGCHC | 4 cut(s) | 170, 367, 534, 1201 |
| Bsp143I | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| Bsp19I | CCATGG | 2 cut(s) | 1182, 1263 |
| BspCNI | CTCAG | 1 cut(s) | 745 |
| BspFNI | CGCG | 9 cut(s) | 153, 417, 443, 773, 775, 777, 834, 861, 1208 |
| BspLI | GGNNCC | 9 cut(s) | 145, 235, 365, 393, 802, 902, 951, 1015, 1097 |
| BspPI | GGATC | 5 cut(s) | 545, 880, 895, 908, 978 |
| BspT104I | TTCGAA | 3 cut(s) | 507, 1124, 1173 |
| BspTNI | GGTCTC | 1 cut(s) | 1287 |
| BsrFI | RCCGGY | 2 cut(s) | 461, 559 |
| BsrI | ACTGG | 3 cut(s) | 164, 502, 901 |
| BssAI | RCCGGY | 2 cut(s) | 461, 559 |
| BssHII | GCGCGC | 1 cut(s) | 773 |
| BssMI | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| BssNI | GRCGYC | 2 cut(s) | 117, 432 |
| BssT1I | CCWWGG | 2 cut(s) | 1182, 1263 |
| Bst2UI | CCWGG | 6 cut(s) | 428, 678, 881, 890, 905, 1291 |
| Bst4CI | ACNGT | 4 cut(s) | 83, 110, 1026, 1100 |
| BstACI | GRCGYC | 2 cut(s) | 117, 432 |
| BstBI | TTCGAA | 3 cut(s) | 507, 1124, 1173 |
| BstC8I | GCNNGC | 7 cut(s) | 6, 187, 407, 463, 775, 859, 942 |
| BstDEI | CTNAG | 1 cut(s) | 732 |
| BstDSI | CCRYGG | 4 cut(s) | 90, 1182, 1263, 1277 |
| BstF5I | GGATG | 2 cut(s) | 489, 715 |
| BstFNI | CGCG | 9 cut(s) | 153, 417, 443, 773, 775, 777, 834, 861, 1208 |
| BstHHI | GCGC | 8 cut(s) | 104, 155, 176, 417, 443, 775, 777, 863 |
| BstKTI | GATC | 8 cut(s) | 540, 547, 604, 888, 903, 973, 1077, 1107 |
| BstMAI | GTCTC | 5 cut(s) | 74, 89, 202, 887, 1287 |
| BstMBI | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| BstMCI | CGRYCG | 3 cut(s) | 547, 564, 977 |
| BstNI | CCWGG | 6 cut(s) | 428, 678, 881, 890, 905, 1291 |
| BstSLI | GKGCMC | 2 cut(s) | 367, 1201 |
| BstUI | CGCG | 9 cut(s) | 153, 417, 443, 773, 775, 777, 834, 861, 1208 |
| BstV1I | GCAGC | 4 cut(s) | 217, 399, 421, 805 |
| BstX2I | RGATCY | 2 cut(s) | 885, 900 |
| BstYI | RGATCY | 2 cut(s) | 885, 900 |
| BstZI | CGGCCG | 1 cut(s) | 974 |
| BtgI | CCRYGG | 4 cut(s) | 90, 1182, 1263, 1277 |
| BtrI | CACGTC | 2 cut(s) | 247, 1233 |
| BtsCI | GGATG | 2 cut(s) | 489, 715 |
| BtsI | GCAGTG | 1 cut(s) | 658 |
| BtsIMutI | CAGTG | 2 cut(s) | 658, 740 |
| Cac8I | GCNNGC | 7 cut(s) | 6, 187, 407, 463, 775, 859, 942 |
| CfoI | GCGC | 8 cut(s) | 104, 155, 176, 417, 443, 775, 777, 863 |
| Cfr10I | RCCGGY | 2 cut(s) | 461, 559 |
| Cfr13I | GGNCC | 7 cut(s) | 7, 363, 364, 640, 652, 1014, 1033 |
| Cfr9I | CCCGGG | 1 cut(s) | 360 |
| CseI | GACGC | 3 cut(s) | 125, 421, 1167 |
| Csp6I | GTAC | 5 cut(s) | 445, 694, 874, 1022, 1153 |
| CviAII | CATG | 2 cut(s) | 1183, 1264 |
| CviQI | GTAC | 5 cut(s) | 445, 694, 874, 1022, 1153 |
| DdeI | CTNAG | 1 cut(s) | 732 |
| DpnI | GATC | 8 cut(s) | 539, 546, 603, 887, 902, 972, 1076, 1106 |
| DpnII | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 66, 1279 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 66, 1279 |
| EaeI | YGGCCR | 2 cut(s) | 262, 974 |
| EagI | CGGCCG | 1 cut(s) | 974 |
| EciI | GGCGGA | 4 cut(s) | 342, 602, 1202, 1229 |
| Ecl136II | GAGCTC | 2 cut(s) | 168, 532 |
| EclXI | CGGCCG | 1 cut(s) | 974 |
| Eco130I | CCWWGG | 2 cut(s) | 1182, 1263 |
| Eco24I | GRGCYC | 3 cut(s) | 170, 367, 534 |
| Eco31I | GGTCTC | 1 cut(s) | 1287 |
| Eco47I | GGWCC | 4 cut(s) | 640, 652, 1014, 1033 |
| Eco52I | CGGCCG | 1 cut(s) | 974 |
| Eco53kI | GAGCTC | 2 cut(s) | 168, 532 |
| Eco57I | CTGAAG | 1 cut(s) | 1036 |
| Eco88I | CYCGRG | 3 cut(s) | 360, 913, 945 |
| EcoICRI | GAGCTC | 2 cut(s) | 168, 532 |
| EcoO109I | RGGNCCY | 4 cut(s) | 7, 364, 1014, 1033 |
| EcoRI | GAATTC | 1 cut(s) | 1226 |
| EcoRII | CCWGG | 6 cut(s) | 426, 676, 879, 888, 903, 1289 |
| EcoT14I | CCWWGG | 2 cut(s) | 1182, 1263 |
| EcoT38I | GRGCYC | 3 cut(s) | 170, 367, 534 |
| ErhI | CCWWGG | 2 cut(s) | 1182, 1263 |
| Esp3I | CGTCTC | 3 cut(s) | 74, 89, 202 |
| FaeI | CATG | 2 cut(s) | 1186, 1267 |
| FaiI | YATR | 4 cut(s) | 1164, 1184, 1265, 1271 |
| FaqI | GGGAC | 5 cut(s) | 35, 278, 419, 1027, 1147 |
| FatI | CATG | 2 cut(s) | 1182, 1263 |
| FauI | CCCGC | 1 cut(s) | 971 |
| FblI | GTMKAC | 1 cut(s) | 786 |
| FokI | GGATG | 2 cut(s) | 476, 702 |
| FriOI | GRGCYC | 3 cut(s) | 170, 367, 534 |
| FspBI | CTAG | 1 cut(s) | 290 |
| GlaI | GCGC | 8 cut(s) | 103, 154, 175, 416, 442, 774, 776, 862 |
| GsaI | CCCAGC | 2 cut(s) | 205, 214 |
| GsuI | CTGGAG | 4 cut(s) | 130, 819, 902, 911 |
| HgaI | GACGC | 3 cut(s) | 125, 421, 1167 |
| HhaI | GCGC | 8 cut(s) | 104, 155, 176, 417, 443, 775, 777, 863 |
| Hin1I | GRCGYC | 2 cut(s) | 117, 432 |
| Hin1II | CATG | 2 cut(s) | 1186, 1267 |
| Hin6I | GCGC | 8 cut(s) | 102, 153, 174, 415, 441, 773, 775, 861 |
| HinP1I | GCGC | 8 cut(s) | 102, 153, 174, 415, 441, 773, 775, 861 |
| HincII | GTYRAC | 4 cut(s) | 259, 280, 744, 787 |
| HindII | GTYRAC | 4 cut(s) | 259, 280, 744, 787 |
| HinfI | GANTC | 9 cut(s) | 60, 705, 745, 911, 925, 1079, 1121, 1245, 1273 |
| HphI | GGTGA | 6 cut(s) | 55, 338, 361, 367, 581, 1126 |
| Hpy166II | GTNNAC | 7 cut(s) | 124, 259, 280, 655, 744, 787, 1168 |
| Hpy188I | TCNGA | 7 cut(s) | 115, 396, 451, 686, 750, 1104, 1253 |
| Hpy8I | GTNNAC | 7 cut(s) | 124, 259, 280, 655, 744, 787, 1168 |
| Hpy99I | CGWCG | 9 cut(s) | 119, 197, 251, 530, 635, 773, 788, 791, 818 |
| HpyAV | CCTTC | 6 cut(s) | 20, 526, 1054, 1060, 1124, 1296 |
| HpyCH4III | ACNGT | 4 cut(s) | 83, 110, 1026, 1100 |
| HpyCH4IV | ACGT | 7 cut(s) | 48, 192, 246, 276, 768, 921, 1232 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 400 |
| HpyF3I | CTNAG | 1 cut(s) | 732 |
| HpySE526I | ACGT | 7 cut(s) | 48, 192, 246, 276, 768, 921, 1232 |
| Hsp92I | GRCGYC | 2 cut(s) | 117, 432 |
| Hsp92II | CATG | 2 cut(s) | 1186, 1267 |
| HspAI | GCGC | 8 cut(s) | 102, 153, 174, 415, 441, 773, 775, 861 |
| KroI | GCCGGC | 1 cut(s) | 461 |
| KroNI | GCCGGC | 1 cut(s) | 463 |
| Kzo9I | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| LmnI | GCTCC | 7 cut(s) | 149, 173, 397, 651, 800, 842, 949 |
| Lsp1109I | GCAGC | 4 cut(s) | 217, 399, 421, 805 |
| LweI | GCATC | 5 cut(s) | 147, 387, 724, 927, 999 |
| MaeI | CTAG | 1 cut(s) | 290 |
| MaeII | ACGT | 7 cut(s) | 48, 192, 246, 276, 768, 921, 1232 |
| MaeIII | GTNAC | 1 cut(s) | 922 |
| MalI | GATC | 8 cut(s) | 539, 546, 603, 887, 902, 972, 1076, 1106 |
| MauBI | CGCGCGCG | 1 cut(s) | 773 |
| MboI | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| MboII | GAAGA | 3 cut(s) | 5, 596, 1084 |
| MflI | RGATCY | 2 cut(s) | 885, 900 |
| MhlI | GDGCHC | 4 cut(s) | 170, 367, 534, 1201 |
| MluCI | AATT | 4 cut(s) | 39, 585, 595, 1226 |
| MluI | ACGCGT | 1 cut(s) | 1206 |
| MlyI | GAGTC | 8 cut(s) | 54, 714, 739, 905, 919, 1088, 1254, 1267 |
| MmeI | TCCRAC | 1 cut(s) | 138 |
| MroNI | GCCGGC | 1 cut(s) | 461 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1145 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1268 |
| MspA1I | CMGCKG | 3 cut(s) | 239, 412, 797 |
| MvaI | CCWGG | 6 cut(s) | 428, 678, 881, 890, 905, 1291 |
| MvnI | CGCG | 9 cut(s) | 153, 417, 443, 773, 775, 777, 834, 861, 1208 |
| NaeI | GCCGGC | 1 cut(s) | 463 |
| NciI | CCSGG | 6 cut(s) | 231, 361, 362, 389, 438, 650 |
| NcoI | CCATGG | 2 cut(s) | 1182, 1263 |
| NdeII | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| NgoMIV | GCCGGC | 1 cut(s) | 461 |
| NlaIII | CATG | 2 cut(s) | 1186, 1267 |
| NlaIV | GGNNCC | 9 cut(s) | 145, 235, 365, 393, 802, 902, 951, 1015, 1097 |
| NmeAIII | GCCGAG | 5 cut(s) | 555, 738, 832, 833, 892 |
| NmuCI | GTSAC | 1 cut(s) | 922 |
| NspV | TTCGAA | 3 cut(s) | 507, 1124, 1173 |
| PaeR7I | CTCGAG | 1 cut(s) | 913 |
| PasI | CCCWGGG | 1 cut(s) | 677 |
| PauI | GCGCGC | 1 cut(s) | 773 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 189, 282, 765, 774, 974 |
| PdiI | GCCGGC | 1 cut(s) | 463 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1145 |
| PfeI | GAWTC | 1 cut(s) | 1121 |
| PflFI | GACNNNGTC | 3 cut(s) | 119, 245, 290 |
| PfoI | TCCNGGA | 2 cut(s) | 888, 903 |
| Ple19I | CGATCG | 1 cut(s) | 547 |
| PleI | GAGTC | 8 cut(s) | 54, 713, 739, 905, 919, 1087, 1253, 1267 |
| PpsI | GAGTC | 8 cut(s) | 54, 713, 739, 905, 919, 1087, 1253, 1267 |
| PpuMI | RGGWCCY | 2 cut(s) | 1014, 1033 |
| Psp124BI | GAGCTC | 2 cut(s) | 170, 534 |
| Psp1406I | AACGTT | 1 cut(s) | 276 |
| Psp5II | RGGWCCY | 2 cut(s) | 1014, 1033 |
| Psp6I | CCWGG | 6 cut(s) | 426, 676, 879, 888, 903, 1289 |
| PspFI | CCCAGC | 2 cut(s) | 201, 210 |
| PspGI | CCWGG | 6 cut(s) | 426, 676, 879, 888, 903, 1289 |
| PspN4I | GGNNCC | 9 cut(s) | 145, 235, 365, 393, 802, 902, 951, 1015, 1097 |
| PspOMI | GGGCCC | 1 cut(s) | 363 |
| PspPI | GGNCC | 7 cut(s) | 7, 363, 364, 640, 652, 1014, 1033 |
| PspPPI | RGGWCCY | 2 cut(s) | 1014, 1033 |
| PspXI | VCTCGAGB | 1 cut(s) | 913 |
| PsuI | RGATCY | 2 cut(s) | 885, 900 |
| PsyI | GACNNNGTC | 3 cut(s) | 119, 245, 290 |
| PteI | GCGCGC | 1 cut(s) | 773 |
| PvuI | CGATCG | 1 cut(s) | 547 |
| PvuII | CAGCTG | 1 cut(s) | 412 |
| RsaI | GTAC | 5 cut(s) | 446, 695, 875, 1023, 1154 |
| RsaNI | GTAC | 5 cut(s) | 445, 694, 874, 1022, 1153 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1268 |
| SacI | GAGCTC | 2 cut(s) | 170, 534 |
| SalI | GTCGAC | 1 cut(s) | 785 |
| Sau3AI | GATC | 8 cut(s) | 537, 544, 601, 885, 900, 970, 1074, 1104 |
| Sau96I | GGNCC | 7 cut(s) | 7, 363, 364, 640, 652, 1014, 1033 |
| ScaI | AGTACT | 1 cut(s) | 695 |
| SchI | GAGTC | 8 cut(s) | 54, 714, 739, 905, 919, 1088, 1254, 1267 |
| SduI | GDGCHC | 4 cut(s) | 170, 367, 534, 1201 |
| SfaNI | GCATC | 5 cut(s) | 147, 387, 724, 927, 999 |
| Sfr274I | CTCGAG | 1 cut(s) | 913 |
| SfuI | TTCGAA | 3 cut(s) | 507, 1124, 1173 |
| SgrDI | CGTCGACG | 1 cut(s) | 785 |
| SinI | GGWCC | 4 cut(s) | 640, 652, 1014, 1033 |
| SlaI | CTCGAG | 1 cut(s) | 913 |
| SmaI | CCCGGG | 1 cut(s) | 362 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1268 |
| SmlI | CTYRAG | 3 cut(s) | 720, 913, 1240 |
| SmoI | CTYRAG | 3 cut(s) | 720, 913, 1240 |
| Sse9I | AATT | 4 cut(s) | 39, 585, 595, 1226 |
| SspMI | CTAG | 1 cut(s) | 290 |
| SstI | GAGCTC | 2 cut(s) | 170, 534 |
| StyI | CCWWGG | 2 cut(s) | 1182, 1263 |
| TaaI | ACNGT | 4 cut(s) | 83, 110, 1026, 1100 |
| TaiI | ACGT | 7 cut(s) | 51, 195, 249, 279, 771, 924, 1235 |
| TaqII | GACCGA | 1 cut(s) | 244 |
| TasI | AATT | 4 cut(s) | 39, 585, 595, 1226 |
| TatI | WGTACW | 1 cut(s) | 693 |
| TauI | GCSGC | 7 cut(s) | 153, 458, 461, 582, 806, 866, 1090 |
| TfiI | GAWTC | 1 cut(s) | 1121 |
| TscAI | CASTG | 2 cut(s) | 665, 740 |
| TseFI | GTSAC | 1 cut(s) | 922 |
| TseI | GCWGC | 4 cut(s) | 205, 409, 412, 818 |
| Tsp45I | GTSAC | 1 cut(s) | 922 |
| TspGWI | ACGGA | 3 cut(s) | 983, 1009, 1266 |
| TspMI | CCCGGG | 1 cut(s) | 360 |
| TspRI | CASTG | 2 cut(s) | 665, 740 |
| Tth111I | GACNNNGTC | 3 cut(s) | 119, 245, 290 |
| VpaK11BI | GGWCC | 4 cut(s) | 640, 652, 1014, 1033 |
| XapI | RAATTY | 1 cut(s) | 1226 |
| XhoI | CTCGAG | 1 cut(s) | 913 |
| XmaI | CCCGGG | 1 cut(s) | 360 |
| XmiI | GTMKAC | 1 cut(s) | 786 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1145 |
| XspI | CTAG | 1 cut(s) | 290 |
| ZrmI | AGTACT | 1 cut(s) | 695 |