Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005093

Physical Location & Seq

Genomic Coordinates Forward (+)

59682526 .. 59685732

Gene Structure 3207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG386300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGCAGGCTCTTTTACCACCCAATTATCTCCTCAAGCCCTACATTCCCCTCCCGTCTCGGGTCGGGCCGACCCGCCTCACCGTCCAATGCGCCTACCGCTCCGACTCCCTCAACTTCCACAGCTCCGTCGGCTCCACCCGATCCGACTGGCAGAGCTCCTGCGCCATTCTCGCCAGCAAGGTCGTCTCCTCCCAGGAGCAGCCCGCTGAAAAATCCGGAAGCGCCGACCACGTCGCCGCGGTCAACGGCCACAAGACCTCCGTTGACCTCGACCTCGTCCCCATCGAGAAGCTCTCCTCCACCGACGACAAGCCGGCCTCCCCTCCCGCCAAGGCCCTCACCATCGCCGACCTCTCCCCGGCGCCCATGCACGGCGCCCAGCTGCGCGTGGCTTACCAGGGCGTTCCCGGCGCCTACTCCGAGGCCGCCGCCGGTAAGGCCTACCCCAACTGCGAGGCCATTCCCTGCGATCAATTCGAAGTCGCTTTCCAGGCCGTGGAGCTCTGGATCGCCGACCGGGCCGTTTTGCCGATTGAAAACTCCCTCGGCGGCTCAATCCACCGGAACTACGATCTTCTCCTCCGCCACCGCCTCCACATCGTCGGCGAGGTCCAGTTACCCGTCCACCACTGCCTGTTAGCACTCCCGGGGGTCCGAAAAGACTACTTGACCCGAGTCATCTCCCACCCGCAGGCCCTGGCCCAGTGCGAGCTCACTCTCACCAAGCTCGGCCTCAACGTCGCACGCGAGGCAGTCGACGACACGGCCGGCGCCGCGGAGTTCATCGCCGCCAACAACCTCCGCGACACGGCCGCAATCGCCAGCGCACGCGCCGCCGATCTGTACGGGCTGAACATCCTCGCCGACGGGATCCAGGACGACTCGAGCAACGTGACCCGGTTCGTGATGCTGGCCCGGGAGCCGATAATTCCCCGGACGGACCGGCCGTTCAAGACGAGCATAGTCTTCGCGCACGACAAGGGGACGTCGGTGCTGTTCAAGGTGCTATCGGCGTTCGCGTTCAGGAACATAAGCTTGACGAAGATCGAGTCGCGGCCGCACCGGAACCGTCCGATCAGACTGGTGAACGACTCGAACGAAGGGACGGCGAAGCACTTCGAGTACTTGTTCTACGTGGACTTCGAGGCCTCCATGGCGGAGGTTAGGGCACAGAATGCGTTGGCGGAGGTCCAGGAGTTCACGTCTTTCTTGAGGGTCCTTGGAAGCTACCCTATGGATATGACCCCCTGGAGCCCTTCGCGGGGTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009987 GO:0010244 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0017144 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0047769 GO:0050896 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902221 GO:1902223

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PDT

Protein Analysis

423

Amino Acids

46.14

Weight (kDa)

6.36

Isoelectric Point (pI)

39.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDT	PF00800	130 - 307	5.4e-59	Prephenate dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08250 AT2G27820 AT3G44720 AT5G22630
fragaria_vesca	FvH4_3g29870
malus_domestica	MD03G1134800.v1.1 MD11G1157600.v1.1
prunus_persica	Prupe.6G119200_v2.0.a1
pyrus_communis	pycom03g09080 pycom11g12770
rosa_chinensis	RchiOBHm_Chr5g0055201 RchiOBHm_Chr7g0203231
rosa_laevigata	RLG00000034973
rosa_multiflora	Rmu_sc0000994.1_g000007 Rmu_sc0010754.1_g000003 Rmu_sc0011582.1_g000002 Rmu_sc0018729.1_g000008
rosa_roxburghii	Rroxscaffold_1G00025130
rosa_rugosa	Rorug05G0291700 Rorug07G0075300.1
rosa_samantha	Rh5AG361500 Rh5BG372900 Rh5CG394800 Rh5DG386300 Rh7AG204600 Rh7BG203800 Rh7CG215600 Rh7DG211200
rosa_wichuraiana	Rw5G033990 Rw7G017810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	989
AccB1I	GGYRCC	4 cut(s)	361, 374, 410, 770
AccB7I	CCANNNNNTGG	1 cut(s)	496
AccBSI	CCGCTC	1 cut(s)	99
AccI	GTMKAC	1 cut(s)	756
AccIII	TCCGGA	1 cut(s)	215
AclWI	GGATC	4 cut(s)	135, 515, 865, 878
AcoI	YGGCCR	5 cut(s)	247, 765, 810, 944, 1055
AcyI	GRCGYC	5 cut(s)	362, 375, 411, 771, 986
AfaI	GTAC	2 cut(s)	845, 1124
AfiI	CCNNNNNNNGG	8 cut(s)	58, 358, 371, 496, 691, 808, 1261, 1262
AgsI	TTSAA	3 cut(s)	536, 952, 1000
AjiI	CACGTC	2 cut(s)	232, 1203
AjnI	CCWGG	7 cut(s)	192, 396, 489, 696, 873, 1191, 1247
AloI	GAACNNNNNNTCC	2 cut(s)	932, 964
AluBI	AGCT	9 cut(s)	123, 156, 292, 382, 502, 712, 727, 1035, 1227
AluI	AGCT	9 cut(s)	123, 156, 292, 382, 502, 712, 727, 1035, 1227
Alw21I	GWGCWC	3 cut(s)	158, 504, 714
Alw26I	GTCTC	2 cut(s)	60, 190
AlwI	GGATC	4 cut(s)	135, 515, 865, 878
AlwNI	CAGNNNCTG	1 cut(s)	697
Ama87I	CYCGRG	5 cut(s)	57, 646, 672, 883, 915
Aor13HI	TCCGGA	1 cut(s)	215
ApeKI	GCWGC	2 cut(s)	199, 382
ArsI	GACNNNNNNTTYG	2 cut(s)	1034, 1066
Asp700I	GAANNNNTTC	1 cut(s)	1115
AsuC2I	CCSGG	9 cut(s)	359, 408, 518, 647, 648, 898, 916, 917, 934
AsuHPI	GGTGA	4 cut(s)	70, 331, 712, 1096
AsuII	TTCGAA	1 cut(s)	477
AvaI	CYCGRG	5 cut(s)	57, 646, 672, 883, 915
AvaII	GGWCC	5 cut(s)	610, 652, 940, 1189, 1216
BaeGI	GKGCMC	1 cut(s)	1171
BamHI	GGATCC	1 cut(s)	870
BanI	GGYRCC	4 cut(s)	361, 374, 410, 770
BanII	GRGCYC	4 cut(s)	158, 504, 714, 1256
BbsI	GAAGAC	1 cut(s)	958
Bbv12I	GWGCWC	3 cut(s)	158, 504, 714
BbvI	GCAGC	2 cut(s)	211, 369
BccI	CCATC	2 cut(s)	290, 350
BceAI	ACGGC	8 cut(s)	262, 388, 479, 506, 780, 825, 931, 1122
BcgI	CGANNNNNNTGC	2 cut(s)	949, 983
BciT130I	CCWGG	7 cut(s)	194, 398, 491, 698, 875, 1193, 1249
BcnI	CCSGG	9 cut(s)	359, 408, 518, 647, 648, 898, 916, 917, 934
BcoDI	GTCTC	2 cut(s)	60, 190
BfaI	CTAG	1 cut(s)	1270
BfoI	RGCGCY	5 cut(s)	225, 365, 378, 414, 774
BglI	GCCNNNNNGGC	3 cut(s)	437, 518, 1154
BmcAI	AGTACT	1 cut(s)	1124
Bme18I	GGWCC	5 cut(s)	610, 652, 940, 1189, 1216
BmeT110I	CYCGRG	5 cut(s)	57, 646, 672, 883, 915
BmgBI	CACGTC	2 cut(s)	232, 1203
BmrI	ACTGGG	1 cut(s)	697
BmsI	GCATC	1 cut(s)	897
BmuI	ACTGGG	1 cut(s)	697
BoxI	GACNNNNGTC	1 cut(s)	674
BpiI	GAAGAC	1 cut(s)	958
BplI	GAGNNNNNCTC	2 cut(s)	278, 310
BpmI	CTGGAG	1 cut(s)	1270
Bpu14I	TTCGAA	1 cut(s)	477
BpuEI	CTTGAG	2 cut(s)	17, 1231
BpuMI	CCSGG	9 cut(s)	359, 408, 518, 647, 648, 898, 916, 917, 934
BsaAI	YACGTR	1 cut(s)	1135
BsaHI	GRCGYC	5 cut(s)	362, 375, 411, 771, 986
BsaWI	WCCGGW	3 cut(s)	215, 561, 1062
BsaXI	ACNNNNNCTCC	4 cut(s)	242, 272, 1187, 1217
Bsc4I	CCNNNNNNNGG	8 cut(s)	58, 358, 371, 496, 691, 808, 1261, 1262
Bse118I	RCCGGY	4 cut(s)	313, 431, 767, 942
Bse1I	ACTGG	4 cut(s)	152, 613, 703, 1086
BseAI	TCCGGA	1 cut(s)	215
BseBI	CCWGG	7 cut(s)	194, 398, 491, 698, 875, 1193, 1249
BseGI	GGATG	1 cut(s)	855
BseLI	CCNNNNNNNGG	8 cut(s)	58, 358, 371, 496, 691, 808, 1261, 1262
BseNI	ACTGG	4 cut(s)	152, 613, 703, 1086
BseRI	GAGGAG	4 cut(s)	20, 178, 286, 569
BseSI	GKGCMC	1 cut(s)	1171
BseX3I	CGGCCG	4 cut(s)	765, 810, 944, 1055
BseXI	GCAGC	2 cut(s)	211, 369
BseYI	CCCAGC	1 cut(s)	378
Bsh1285I	CGRYCG	5 cut(s)	517, 768, 813, 947, 1058
BshNI	GGYRCC	4 cut(s)	361, 374, 410, 770
BsiEI	CGRYCG	5 cut(s)	517, 768, 813, 947, 1058
BsiHKAI	GWGCWC	3 cut(s)	158, 504, 714
BsiHKCI	CYCGRG	5 cut(s)	57, 646, 672, 883, 915
BslFI	GGGAC	3 cut(s)	263, 997, 1117
BslI	CCNNNNNNNGG	8 cut(s)	58, 358, 371, 496, 691, 808, 1261, 1262
BsmAI	GTCTC	2 cut(s)	60, 190
BsmBI	CGTCTC	2 cut(s)	60, 190
BsmFI	GGGAC	3 cut(s)	263, 997, 1117
BsmI	GAATGC	1 cut(s)	1180
BsoBI	CYCGRG	5 cut(s)	57, 646, 672, 883, 915
Bsp119I	TTCGAA	1 cut(s)	477
Bsp1286I	GDGCHC	5 cut(s)	158, 504, 714, 1171, 1256
Bsp13I	TCCGGA	1 cut(s)	215
Bsp143I	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
Bsp19I	CCATGG	1 cut(s)	1152
BspEI	TCCGGA	1 cut(s)	215
BspPI	GGATC	4 cut(s)	135, 515, 865, 878
BspT104I	TTCGAA	1 cut(s)	477
BspT107I	GGYRCC	4 cut(s)	361, 374, 410, 770
BsrBI	CCGCTC	1 cut(s)	99
BsrFI	RCCGGY	4 cut(s)	313, 431, 767, 942
BsrI	ACTGG	4 cut(s)	152, 613, 703, 1086
BssAI	RCCGGY	4 cut(s)	313, 431, 767, 942
BssMI	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
BssNI	GRCGYC	5 cut(s)	362, 375, 411, 771, 986
BssT1I	CCWWGG	3 cut(s)	330, 1152, 1219
Bst2UI	CCWGG	7 cut(s)	194, 398, 491, 698, 875, 1193, 1249
Bst4CI	ACNGT	2 cut(s)	82, 1070
BstACI	GRCGYC	5 cut(s)	362, 375, 411, 771, 986
BstAPI	GCANNNNNTGC	1 cut(s)	1175
BstBAI	YACGTR	1 cut(s)	1135
BstBI	TTCGAA	1 cut(s)	477
BstDSI	CCRYGG	4 cut(s)	237, 495, 774, 1152
BstF5I	GGATG	1 cut(s)	855
BstH2I	RGCGCY	5 cut(s)	225, 365, 378, 414, 774
BstKTI	GATC	8 cut(s)	143, 472, 510, 574, 841, 873, 1047, 1077
BstMAI	GTCTC	2 cut(s)	60, 190
BstMBI	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
BstMCI	CGRYCG	5 cut(s)	517, 768, 813, 947, 1058
BstNI	CCWGG	7 cut(s)	194, 398, 491, 698, 875, 1193, 1249
BstPAI	GACNNNNGTC	1 cut(s)	674
BstSLI	GKGCMC	1 cut(s)	1171
BstV1I	GCAGC	2 cut(s)	211, 369
BstV2I	GAAGAC	1 cut(s)	958
BstX2I	RGATCY	1 cut(s)	870
BstYI	RGATCY	1 cut(s)	870
BstZI	CGGCCG	4 cut(s)	765, 810, 944, 1055
BtgI	CCRYGG	4 cut(s)	237, 495, 774, 1152
BtgZI	GCGATG	2 cut(s)	328, 769
BtrI	CACGTC	2 cut(s)	232, 1203
BtsCI	GGATG	1 cut(s)	855
BtsI	GCAGTG	1 cut(s)	628
BtsIMutI	CAGTG	2 cut(s)	628, 710
CaiI	CAGNNNCTG	1 cut(s)	697
CciNI	GCGGCCGC	1 cut(s)	1055
Cfr10I	RCCGGY	4 cut(s)	313, 431, 767, 942
Cfr42I	CCGCGG	2 cut(s)	240, 777
Cfr9I	CCCGGG	2 cut(s)	646, 915
CpoI	CGGWCCG	1 cut(s)	940
Csp6I	GTAC	2 cut(s)	844, 1123
CspI	CGGWCCG	1 cut(s)	940
CviAII	CATG	2 cut(s)	367, 1153
CviQI	GTAC	2 cut(s)	844, 1123
DinI	GGCGCC	4 cut(s)	363, 376, 412, 772
DpnI	GATC	8 cut(s)	142, 471, 509, 573, 840, 872, 1046, 1076
DpnII	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
EaeI	YGGCCR	5 cut(s)	247, 765, 810, 944, 1055
EagI	CGGCCG	4 cut(s)	765, 810, 944, 1055
EciI	GGCGGA	3 cut(s)	572, 1172, 1199
Ecl136II	GAGCTC	3 cut(s)	156, 502, 712
EclXI	CGGCCG	4 cut(s)	765, 810, 944, 1055
Eco130I	CCWWGG	3 cut(s)	330, 1152, 1219
Eco147I	AGGCCT	2 cut(s)	440, 1148
Eco24I	GRGCYC	4 cut(s)	158, 504, 714, 1256
Eco47I	GGWCC	5 cut(s)	610, 652, 940, 1189, 1216
Eco52I	CGGCCG	4 cut(s)	765, 810, 944, 1055
Eco53kI	GAGCTC	3 cut(s)	156, 502, 712
Eco88I	CYCGRG	5 cut(s)	57, 646, 672, 883, 915
EcoICRI	GAGCTC	3 cut(s)	156, 502, 712
EcoO109I	RGGNCCY	3 cut(s)	334, 694, 1216
EcoRII	CCWGG	7 cut(s)	192, 396, 489, 696, 873, 1191, 1247
EcoT14I	CCWWGG	3 cut(s)	330, 1152, 1219
EcoT38I	GRGCYC	4 cut(s)	158, 504, 714, 1256
EgeI	GGCGCC	4 cut(s)	363, 376, 412, 772
EheI	GGCGCC	4 cut(s)	363, 376, 412, 772
ErhI	CCWWGG	3 cut(s)	330, 1152, 1219
Esp3I	CGTCTC	2 cut(s)	60, 190
FaeI	CATG	2 cut(s)	370, 1156
FaiI	YATR	6 cut(s)	368, 962, 1031, 1154, 1235, 1241
FaqI	GGGAC	3 cut(s)	263, 997, 1117
FatI	CATG	2 cut(s)	366, 1152
FauI	CCCGC	5 cut(s)	80, 211, 334, 696, 1254
FblI	GTMKAC	1 cut(s)	756
FokI	GGATG	1 cut(s)	842
FriOI	GRGCYC	4 cut(s)	158, 504, 714, 1256
FspBI	CTAG	1 cut(s)	1270
GsaI	CCCAGC	1 cut(s)	382
GsuI	CTGGAG	1 cut(s)	1270
HaeII	RGCGCY	5 cut(s)	225, 365, 378, 414, 774
Hin1I	GRCGYC	5 cut(s)	362, 375, 411, 771, 986
Hin1II	CATG	2 cut(s)	370, 1156
HincII	GTYRAC	3 cut(s)	244, 265, 757
HindII	GTYRAC	3 cut(s)	244, 265, 757
HindIII	AAGCTT	1 cut(s)	1033
HinfI	GANTC	5 cut(s)	104, 675, 881, 1049, 1091
HphI	GGTGA	4 cut(s)	70, 331, 712, 1096
Hpy166II	GTNNAC	7 cut(s)	244, 265, 625, 757, 1087, 1138, 1200
Hpy188I	TCNGA	6 cut(s)	103, 145, 421, 656, 1074, 1079
Hpy188III	TCNNGA	7 cut(s)	216, 286, 505, 904, 952, 1024, 1210
Hpy8I	GTNNAC	7 cut(s)	244, 265, 625, 757, 1087, 1138, 1200
Hpy99I	CGWCG	8 cut(s)	131, 236, 308, 605, 743, 761, 869, 991
HpyAV	CCTTC	2 cut(s)	1094, 1266
HpyCH4III	ACNGT	2 cut(s)	82, 1070
HpyCH4IV	ACGT	6 cut(s)	231, 738, 891, 986, 1134, 1202
HpyCH4V	TGCA	2 cut(s)	4, 370
HpySE526I	ACGT	6 cut(s)	231, 738, 891, 986, 1134, 1202
Hsp92I	GRCGYC	5 cut(s)	362, 375, 411, 771, 986
Hsp92II	CATG	2 cut(s)	370, 1156
KasI	GGCGCC	4 cut(s)	361, 374, 410, 770
Kpn2I	TCCGGA	1 cut(s)	215
KroI	GCCGGC	2 cut(s)	313, 767
KroNI	GCCGGC	2 cut(s)	315, 769
KspI	CCGCGG	2 cut(s)	240, 777
Kzo9I	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
LmnI	GCTCC	8 cut(s)	104, 128, 137, 161, 196, 499, 919, 1251
Lsp1109I	GCAGC	2 cut(s)	211, 369
LweI	GCATC	1 cut(s)	897
MaeI	CTAG	1 cut(s)	1270
MaeII	ACGT	6 cut(s)	231, 738, 891, 986, 1134, 1202
MaeIII	GTNAC	3 cut(s)	615, 892, 1265
MalI	GATC	8 cut(s)	142, 471, 509, 573, 840, 872, 1046, 1076
MbiI	CCGCTC	1 cut(s)	99
MboI	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
MboII	GAAGA	3 cut(s)	566, 958, 1054
MflI	RGATCY	1 cut(s)	870
MhlI	GDGCHC	5 cut(s)	158, 504, 714, 1171, 1256
MluCI	AATT	3 cut(s)	22, 473, 927
Mly113I	GGCGCC	4 cut(s)	362, 375, 411, 771
MlyI	GAGTC	5 cut(s)	98, 684, 875, 1058, 1085
MmeI	TCCRAC	2 cut(s)	126, 168
MroI	TCCGGA	1 cut(s)	215
MroNI	GCCGGC	2 cut(s)	313, 767
MroXI	GAANNNNTTC	1 cut(s)	1115
MspA1I	CMGCKG	4 cut(s)	206, 239, 382, 776
Mva1269I	GAATGC	1 cut(s)	1180
MvaI	CCWGG	7 cut(s)	194, 398, 491, 698, 875, 1193, 1249
NaeI	GCCGGC	2 cut(s)	315, 769
NarI	GGCGCC	4 cut(s)	362, 375, 411, 771
NciI	CCSGG	9 cut(s)	359, 408, 518, 647, 648, 898, 916, 917, 934
NcoI	CCATGG	1 cut(s)	1152
NdeII	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
NgoMIV	GCCGGC	2 cut(s)	313, 767
NlaIII	CATG	2 cut(s)	370, 1156
NmeAIII	GCCGAG	2 cut(s)	525, 708
NmuCI	GTSAC	2 cut(s)	892, 1265
NotI	GCGGCCGC	1 cut(s)	1055
NspV	TTCGAA	1 cut(s)	477
PaeR7I	CTCGAG	1 cut(s)	883
PceI	AGGCCT	2 cut(s)	440, 1148
PcsI	WCGNNNNNNNCGW	7 cut(s)	282, 735, 744, 944, 1016, 1095, 1140
PctI	GAATGC	1 cut(s)	1180
PdiI	GCCGGC	2 cut(s)	315, 769
PdmI	GAANNNNTTC	1 cut(s)	1115
PflFI	GACNNNGTC	2 cut(s)	230, 275
PflMI	CCANNNNNTGG	1 cut(s)	496
PfoI	TCCNGGA	2 cut(s)	873, 1191
PleI	GAGTC	5 cut(s)	98, 683, 875, 1057, 1085
PluTI	GGCGCC	4 cut(s)	365, 378, 414, 774
PpsI	GAGTC	5 cut(s)	98, 683, 875, 1057, 1085
Ppu21I	YACGTR	1 cut(s)	1135
PpuMI	RGGWCCY	1 cut(s)	1216
PshAI	GACNNNNGTC	1 cut(s)	674
Psp124BI	GAGCTC	3 cut(s)	158, 504, 714
Psp5II	RGGWCCY	1 cut(s)	1216
Psp6I	CCWGG	7 cut(s)	192, 396, 489, 696, 873, 1191, 1247
PspFI	CCCAGC	1 cut(s)	378
PspGI	CCWGG	7 cut(s)	192, 396, 489, 696, 873, 1191, 1247
PspPPI	RGGWCCY	1 cut(s)	1216
PspXI	VCTCGAGB	1 cut(s)	883
PstNI	CAGNNNCTG	1 cut(s)	697
PsuI	RGATCY	1 cut(s)	870
PsyI	GACNNNGTC	2 cut(s)	230, 275
PvuII	CAGCTG	1 cut(s)	382
RsaI	GTAC	2 cut(s)	845, 1124
RsaNI	GTAC	2 cut(s)	844, 1123
Rsr2I	CGGWCCG	1 cut(s)	940
RsrII	CGGWCCG	1 cut(s)	940
SacI	GAGCTC	3 cut(s)	158, 504, 714
SacII	CCGCGG	2 cut(s)	240, 777
SalI	GTCGAC	1 cut(s)	755
Sau3AI	GATC	8 cut(s)	140, 469, 507, 571, 838, 870, 1044, 1074
ScaI	AGTACT	1 cut(s)	1124
SchI	GAGTC	5 cut(s)	98, 684, 875, 1058, 1085
SduI	GDGCHC	5 cut(s)	158, 504, 714, 1171, 1256
SfaNI	GCATC	1 cut(s)	897
SfoI	GGCGCC	4 cut(s)	363, 376, 412, 772
Sfr274I	CTCGAG	1 cut(s)	883
Sfr303I	CCGCGG	2 cut(s)	240, 777
SfuI	TTCGAA	1 cut(s)	477
SgrBI	CCGCGG	2 cut(s)	240, 777
SinI	GGWCC	5 cut(s)	610, 652, 940, 1189, 1216
SlaI	CTCGAG	1 cut(s)	883
SmaI	CCCGGG	2 cut(s)	648, 917
SmlI	CTYRAG	3 cut(s)	32, 883, 1210
SmoI	CTYRAG	3 cut(s)	32, 883, 1210
Sse9I	AATT	3 cut(s)	22, 473, 927
SseBI	AGGCCT	2 cut(s)	440, 1148
SspDI	GGCGCC	4 cut(s)	361, 374, 410, 770
SspMI	CTAG	1 cut(s)	1270
SstI	GAGCTC	3 cut(s)	158, 504, 714
StuI	AGGCCT	2 cut(s)	440, 1148
StyI	CCWWGG	3 cut(s)	330, 1152, 1219
TaaI	ACNGT	2 cut(s)	82, 1070
TaiI	ACGT	6 cut(s)	234, 741, 894, 989, 1137, 1205
TaqI	TCGA	9 cut(s)	270, 285, 477, 756, 884, 1047, 1094, 1119, 1143
TasI	AATT	3 cut(s)	22, 473, 927
TatI	WGTACW	1 cut(s)	1122
TscAI	CASTG	2 cut(s)	635, 710
TseFI	GTSAC	2 cut(s)	892, 1265
TseI	GCWGC	2 cut(s)	199, 382
Tsp45I	GTSAC	2 cut(s)	892, 1265
TspDTI	ATGAA	1 cut(s)	772
TspGWI	ACGGA	3 cut(s)	115, 250, 953
TspMI	CCCGGG	2 cut(s)	646, 915
TspRI	CASTG	2 cut(s)	635, 710
Tth111I	GACNNNGTC	2 cut(s)	230, 275
Van91I	CCANNNNNTGG	1 cut(s)	496
VpaK11BI	GGWCC	5 cut(s)	610, 652, 940, 1189, 1216
XhoI	CTCGAG	1 cut(s)	883
XmaI	CCCGGG	2 cut(s)	646, 915
XmiI	GTMKAC	1 cut(s)	756
XmnI	GAANNNNTTC	1 cut(s)	1115
XspI	CTAG	1 cut(s)	1270
ZraI	GACGTC	1 cut(s)	987
ZrmI	AGTACT	1 cut(s)	1124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.