Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005093

Physical Location & Seq

Genomic Coordinates Reverse (-)

7548641 .. 7550221

Gene Structure 1581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g09080.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGCAGTCTCTTCTTCCGCCCTCACCAAACAATCTCACAAGCCCCGCATTCCGCCTCACCCGCCTCGCCCCCACCCGACTCCCCGTCTTTAAATGCGCCTACCGCTCCGACTCCGTCCACTTCCCCAACGGCGTCGGCTCCAGTCGCGCCGACTGGCAGAGCTCCTGCGCCATTCTTGCCAGCAACGTCGTCTCCCAGCAACCCCATACCCCCTCCGACAAATCCGGAACCGCTGACCATGTCGTCTCGGTCAACGGCCACAAGACCTCCGTGGACCTCGATATTGTCCCCATCGAAAAGCTCGAAGACGACAAGTCGTCTTCGCCGCCTCCGCCTCCCAGGGCGCTCACCATCACCGACTACTCTCCAGCTCCTATGCACGGCTCCCAGCTGCGCGTGGCCTACCAAGGCGTCCCCGGCGCGTACTCCGAAGCCGCCGCCGGCAAAGCGTACCCGAAATGCGAGGCCATCCCCTGTGATCAATTCGAAGTCGCCTTCCAGGCCGTCGAGCTCTGGATCGCCGATCGAGCAGTTTTGCCTGTCGAAAACTCCCTCGGCGGCTCAATTCACCGTAATTACGATCTCCTTCTCCGCCACCGCCTCCACATCGTTGGGGAAGTCCAGCTCCCGGTCCACCACTGCCTCTTAGCCCTCCCCGGAGTCCGAAAAGAGTACTTGAACCGAGTCATCTCGCATCCCCAAGCCTTAGCTCAATGCGAGCTGACTCTCACCAAACTCGGCCTCAACGTCGCCCGAGAGGCCGTCGACGACACCGCAGGCGCGGCCGAGTTCGTCGCCGCCAACAACCTCCGGGACACGGCAGCGATAGCCTCCGCGCGAGCCGCCGAGCTCTACGGCATGGAGATCTTGGAGAATGGGATCCAGGATGACTCGAGCAACGTGACACGCTTCGTGATGCTGGCCCGGGAGCCGATCATCCCCCGTACGGACCGGCCGTTCAAAACGAGCATCGTCTTCGCACACGACAAGGGGACGTCGGTTCTGTTCAAGGTCCTATCGGCGTTCGCGTTCCGGAACATCAGCCTGACGAAGATAGAGTCGCGGCCGCACCGGAACCGTCCGATCAGGCTGGTGAGCGATTCGAACGAGGGGACGGCGAAGCACTTCGAGTACCTGTTCTACGTGGACTTCGAGGCATCGATGGCGGAGGTCAGGGCACAGAACGCGCTGGCGGAGGTGCAGGAGTTCACGTCCTTCTTAAGGTATAATTATTACCACGAAGAACAAGGACTTGGGAGAAAATTTGATGTTTTTCGATTTTCTCTCTCATTCGCTTACCTACCCTTTTTTATTATTATTATTTTTTTAATATTCGATGGATCTGAATCCGGATCGATGGGTGGGCCCATGCGATCACAAACAAGTGAATACAATTTGGAATTTGGTGTTTGGGTAATTATATTTATTTGTAGTTTTACATTTTTTCAGTCAACTTTTCTTATGTCACGTGTAACAATGAACAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009987 GO:0010244 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0017144 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0047769 GO:0050896 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902221 GO:1902223

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PDT

Protein Analysis

496

Amino Acids

54.96

Weight (kDa)

6.32

Isoelectric Point (pI)

44.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08250 AT2G27820 AT3G44720 AT5G22630
fragaria_vesca	FvH4_3g29870
malus_domestica	MD03G1134800.v1.1 MD11G1157600.v1.1
prunus_persica	Prupe.6G119200_v2.0.a1
pyrus_communis	pycom03g09080 pycom11g12770
rosa_chinensis	RchiOBHm_Chr5g0055201 RchiOBHm_Chr7g0203231
rosa_laevigata	RLG00000034973
rosa_multiflora	Rmu_sc0000994.1_g000007 Rmu_sc0010754.1_g000003 Rmu_sc0011582.1_g000002 Rmu_sc0018729.1_g000008
rosa_roxburghii	Rroxscaffold_1G00025130
rosa_rugosa	Rorug05G0291700 Rorug07G0075300.1
rosa_samantha	Rh5AG361500 Rh5BG372900 Rh5CG394800 Rh5DG386300 Rh7AG204600 Rh7BG203800 Rh7CG215600 Rh7DG211200
rosa_wichuraiana	Rw5G033990 Rw7G017810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	242
AatII	GACGTC	1 cut(s)	998
AccBSI	CCGCTC	1 cut(s)	105
AccI	GTMKAC	1 cut(s)	765
AccII	CGCG	9 cut(s)	147, 396, 422, 782, 836, 838, 1028, 1063, 1187
AccIII	TCCGGA	3 cut(s)	224, 1032, 1349
AclWI	GGATC	5 cut(s)	524, 874, 887, 1348, 1360
AcoI	YGGCCR	4 cut(s)	256, 783, 953, 1064
AcsI	RAATTY	2 cut(s)	1262, 1400
AcvI	CACGTG	1 cut(s)	1469
AcyI	GRCGYC	3 cut(s)	132, 411, 995
AfaI	GTAC	5 cut(s)	425, 452, 674, 946, 1133
AfiI	CCNNNNNNNGG	5 cut(s)	380, 628, 817, 946, 1221
AflII	CTTAAG	1 cut(s)	1219
AflIII	ACRYGT	1 cut(s)	1468
AgsI	TTSAA	3 cut(s)	679, 961, 1009
AhdI	GACNNNNNGTC	3 cut(s)	83, 313, 316
AjiI	CACGTC	1 cut(s)	1212
AjnI	CCWGG	3 cut(s)	338, 498, 882
AjuI	GAANNNNNNNTTGG	2 cut(s)	1236, 1268
AloI	GAACNNNNNNTCC	2 cut(s)	941, 973
AluBI	AGCT	9 cut(s)	162, 301, 371, 391, 511, 625, 710, 721, 850
AluI	AGCT	9 cut(s)	162, 301, 371, 391, 511, 625, 710, 721, 850
Alw21I	GWGCWC	3 cut(s)	164, 513, 852
Alw26I	GTCTC	3 cut(s)	12, 196, 250
AlwI	GGATC	5 cut(s)	524, 874, 887, 1348, 1360
Ama87I	CYCGRG	3 cut(s)	753, 892, 924
Aor13HI	TCCGGA	3 cut(s)	224, 1032, 1349
ApaI	GGGCCC	1 cut(s)	1368
ApeKI	GCWGC	2 cut(s)	391, 821
ApoI	RAATTY	2 cut(s)	1262, 1400
ArsI	GACNNNNNNTTYG	2 cut(s)	1043, 1075
Asp700I	GAANNNNTTC	1 cut(s)	1124
AspLEI	GCGC	9 cut(s)	98, 149, 170, 346, 396, 422, 782, 838, 1189
AspS9I	GGNCC	7 cut(s)	274, 631, 922, 949, 1012, 1364, 1365
AsuC2I	CCSGG	6 cut(s)	417, 629, 657, 812, 925, 926
AsuHPI	GGTGA	7 cut(s)	15, 49, 340, 346, 560, 721, 1105
AsuII	TTCGAA	2 cut(s)	486, 1103
AvaI	CYCGRG	3 cut(s)	753, 892, 924
AvaII	GGWCC	4 cut(s)	274, 631, 949, 1012
BaeGI	GKGCMC	2 cut(s)	1180, 1368
BamHI	GGATCC	1 cut(s)	879
BanII	GRGCYC	4 cut(s)	164, 513, 852, 1368
BbrPI	CACGTG	1 cut(s)	1469
BbsI	GAAGAC	3 cut(s)	312, 312, 967
Bbv12I	GWGCWC	3 cut(s)	164, 513, 852
BbvI	GCAGC	2 cut(s)	378, 833
BccI	CCATC	6 cut(s)	299, 359, 476, 1156, 1331, 1351
BceAI	ACGGC	9 cut(s)	145, 271, 397, 488, 746, 834, 871, 940, 1131
BcgI	CGANNNNNNTGC	2 cut(s)	958, 992
BciT130I	CCWGG	3 cut(s)	340, 500, 884
BclI	TGATCA	1 cut(s)	478
BcnI	CCSGG	6 cut(s)	417, 629, 657, 812, 925, 926
BcoDI	GTCTC	3 cut(s)	12, 196, 250
BfoI	RGCGCY	1 cut(s)	347
BfrI	CTTAAG	1 cut(s)	1219
BglI	GCCNNNNNGGC	2 cut(s)	500, 758
BglII	AGATCT	1 cut(s)	864
BmcAI	AGTACT	1 cut(s)	674
Bme1390I	CCNGG	9 cut(s)	340, 417, 500, 629, 657, 812, 884, 925, 926
Bme18I	GGWCC	4 cut(s)	274, 631, 949, 1012
BmeRI	GACNNNNNGTC	3 cut(s)	83, 313, 316
BmeT110I	CYCGRG	3 cut(s)	753, 892, 924
BmgBI	CACGTC	1 cut(s)	1212
BmgT120I	GGNCC	7 cut(s)	274, 631, 922, 949, 1012, 1364, 1365
BmiI	GGNNCC	7 cut(s)	139, 229, 385, 881, 930, 1076, 1366
BmrFI	CCNGG	9 cut(s)	340, 417, 500, 629, 657, 812, 884, 925, 926
BmsI	GCATC	4 cut(s)	703, 906, 978, 1166
BpiI	GAAGAC	3 cut(s)	312, 312, 967
BpmI	CTGGAG	2 cut(s)	124, 351
Bpu10I	CCTNAGC	1 cut(s)	706
Bpu14I	TTCGAA	2 cut(s)	486, 1103
BpuMI	CCSGG	6 cut(s)	417, 629, 657, 812, 925, 926
Bsa29I	ATCGAT	2 cut(s)	1160, 1355
BsaAI	YACGTR	2 cut(s)	1144, 1469
BsaBI	GATNNNNATC	1 cut(s)	1345
BsaHI	GRCGYC	3 cut(s)	132, 411, 995
BsaJI	CCNNGG	8 cut(s)	270, 338, 339, 406, 415, 553, 655, 924
BsaWI	WCCGGW	4 cut(s)	224, 1032, 1071, 1349
BsaXI	ACNNNNNCTCC	6 cut(s)	176, 206, 251, 281, 1196, 1226
Bsc4I	CCNNNNNNNGG	5 cut(s)	380, 628, 817, 946, 1221
Bse118I	RCCGGY	2 cut(s)	440, 951
Bse1I	ACTGG	2 cut(s)	141, 158
Bse8I	GATNNNNATC	1 cut(s)	1345
BseAI	TCCGGA	3 cut(s)	224, 1032, 1349
BseBI	CCWGG	3 cut(s)	340, 500, 884
BseCI	ATCGAT	2 cut(s)	1160, 1355
BseDI	CCNNGG	8 cut(s)	270, 338, 339, 406, 415, 553, 655, 924
BseGI	GGATG	4 cut(s)	468, 694, 892, 936
BseJI	GATNNNNATC	1 cut(s)	1345
BseLI	CCNNNNNNNGG	5 cut(s)	380, 628, 817, 946, 1221
BseNI	ACTGG	2 cut(s)	141, 158
BseSI	GKGCMC	2 cut(s)	1180, 1368
BseX3I	CGGCCG	3 cut(s)	783, 953, 1064
BseXI	GCAGC	2 cut(s)	378, 833
BseYI	CCCAGC	2 cut(s)	195, 387
BsgI	GTGCAG	1 cut(s)	1220
Bsh1236I	CGCG	9 cut(s)	147, 396, 422, 782, 836, 838, 1028, 1063, 1187
Bsh1285I	CGRYCG	4 cut(s)	526, 786, 956, 1067
BshVI	ATCGAT	2 cut(s)	1160, 1355
BsiEI	CGRYCG	4 cut(s)	526, 786, 956, 1067
BsiHKAI	GWGCWC	3 cut(s)	164, 513, 852
BsiHKCI	CYCGRG	3 cut(s)	753, 892, 924
BsiWI	CGTACG	1 cut(s)	944
BslFI	GGGAC	5 cut(s)	272, 398, 827, 1006, 1126
BslI	CCNNNNNNNGG	5 cut(s)	380, 628, 817, 946, 1221
BsmAI	GTCTC	3 cut(s)	12, 196, 250
BsmBI	CGTCTC	2 cut(s)	196, 250
BsmFI	GGGAC	5 cut(s)	272, 398, 827, 1006, 1126
BsmI	GAATGC	1 cut(s)	47
BsoBI	CYCGRG	3 cut(s)	753, 892, 924
Bsp119I	TTCGAA	2 cut(s)	486, 1103
Bsp120I	GGGCCC	1 cut(s)	1364
Bsp1286I	GDGCHC	5 cut(s)	164, 513, 852, 1180, 1368
Bsp13I	TCCGGA	3 cut(s)	224, 1032, 1349
BspDI	ATCGAT	2 cut(s)	1160, 1355
BspEI	TCCGGA	3 cut(s)	224, 1032, 1349
BspFNI	CGCG	9 cut(s)	147, 396, 422, 782, 836, 838, 1028, 1063, 1187
BspLI	GGNNCC	7 cut(s)	139, 229, 385, 881, 930, 1076, 1366
BspPI	GGATC	5 cut(s)	524, 874, 887, 1348, 1360
BspT104I	TTCGAA	2 cut(s)	486, 1103
BspTI	CTTAAG	1 cut(s)	1219
BsrBI	CCGCTC	1 cut(s)	105
BsrFI	RCCGGY	2 cut(s)	440, 951
BsrI	ACTGG	2 cut(s)	141, 158
BssAI	RCCGGY	2 cut(s)	440, 951
BssECI	CCNNGG	8 cut(s)	270, 338, 339, 406, 415, 553, 655, 924
BssNI	GRCGYC	3 cut(s)	132, 411, 995
BssT1I	CCWWGG	1 cut(s)	406
Bst2UI	CCWGG	3 cut(s)	340, 500, 884
Bst4CI	ACNGT	2 cut(s)	572, 1079
Bst6I	CTCTTC	1 cut(s)	15
BstACI	GRCGYC	3 cut(s)	132, 411, 995
BstAFI	CTTAAG	1 cut(s)	1219
BstBAI	YACGTR	2 cut(s)	1144, 1469
BstBI	TTCGAA	2 cut(s)	486, 1103
BstC8I	GCNNGC	7 cut(s)	181, 442, 719, 778, 840, 921, 1191
BstDEI	CTNAG	2 cut(s)	646, 706
BstDSI	CCRYGG	1 cut(s)	270
BstENI	CCTNNNNNAGG	1 cut(s)	1219
BstF5I	GGATG	4 cut(s)	468, 694, 892, 936
BstFNI	CGCG	9 cut(s)	147, 396, 422, 782, 836, 838, 1028, 1063, 1187
BstH2I	RGCGCY	1 cut(s)	347
BstHHI	GCGC	9 cut(s)	98, 149, 170, 346, 396, 422, 782, 838, 1189
BstMAI	GTCTC	3 cut(s)	12, 196, 250
BstMCI	CGRYCG	4 cut(s)	526, 786, 956, 1067
BstNI	CCWGG	3 cut(s)	340, 500, 884
BstSCI	CCNGG	9 cut(s)	338, 415, 498, 627, 655, 810, 882, 923, 924
BstSLI	GKGCMC	2 cut(s)	1180, 1368
BstUI	CGCG	9 cut(s)	147, 396, 422, 782, 836, 838, 1028, 1063, 1187
BstV1I	GCAGC	2 cut(s)	378, 833
BstV2I	GAAGAC	3 cut(s)	312, 312, 967
BstX2I	RGATCY	3 cut(s)	864, 879, 1340
BstXI	CCANNNNNNTGG	1 cut(s)	611
BstYI	RGATCY	3 cut(s)	864, 879, 1340
BstZI	CGGCCG	3 cut(s)	783, 953, 1064
Bsu15I	ATCGAT	2 cut(s)	1160, 1355
BsuTUI	ATCGAT	2 cut(s)	1160, 1355
BtgI	CCRYGG	1 cut(s)	270
BtrI	CACGTC	1 cut(s)	1212
BtsCI	GGATG	4 cut(s)	468, 694, 892, 936
BtsI	GCAGTG	1 cut(s)	637
BtsIMutI	CAGTG	1 cut(s)	637
Cac8I	GCNNGC	7 cut(s)	181, 442, 719, 778, 840, 921, 1191
CciNI	GCGGCCGC	1 cut(s)	1064
CfoI	GCGC	9 cut(s)	98, 149, 170, 346, 396, 422, 782, 838, 1189
Cfr10I	RCCGGY	2 cut(s)	440, 951
Cfr13I	GGNCC	7 cut(s)	274, 631, 922, 949, 1012, 1364, 1365
Cfr9I	CCCGGG	1 cut(s)	924
ClaI	ATCGAT	2 cut(s)	1160, 1355
CpoI	CGGWCCG	1 cut(s)	949
CseI	GACGC	2 cut(s)	121, 400
Csp6I	GTAC	5 cut(s)	424, 451, 673, 945, 1132
CspI	CGGWCCG	1 cut(s)	949
CviAII	CATG	3 cut(s)	239, 859, 1369
CviQI	GTAC	5 cut(s)	424, 451, 673, 945, 1132
DdeI	CTNAG	2 cut(s)	646, 706
DraI	TTTAAA	1 cut(s)	91
DrdI	GACNNNNNNGTC	1 cut(s)	242
DriI	GACNNNNNGTC	3 cut(s)	83, 313, 316
DseDI	GACNNNNNNGTC	1 cut(s)	242
EaeI	YGGCCR	4 cut(s)	256, 783, 953, 1064
EagI	CGGCCG	3 cut(s)	783, 953, 1064
Eam1104I	CTCTTC	1 cut(s)	15
Eam1105I	GACNNNNNGTC	3 cut(s)	83, 313, 316
EarI	CTCTTC	1 cut(s)	15
EciI	GGCGGA	6 cut(s)	6, 41, 321, 581, 1181, 1208
Ecl136II	GAGCTC	3 cut(s)	162, 511, 850
EclXI	CGGCCG	3 cut(s)	783, 953, 1064
Eco130I	CCWWGG	1 cut(s)	406
Eco24I	GRGCYC	4 cut(s)	164, 513, 852, 1368
Eco47I	GGWCC	4 cut(s)	274, 631, 949, 1012
Eco52I	CGGCCG	3 cut(s)	783, 953, 1064
Eco53kI	GAGCTC	3 cut(s)	162, 511, 850
Eco72I	CACGTG	1 cut(s)	1469
Eco88I	CYCGRG	3 cut(s)	753, 892, 924
EcoICRI	GAGCTC	3 cut(s)	162, 511, 850
EcoNI	CCTNNNNNAGG	1 cut(s)	1219
EcoO109I	RGGNCCY	1 cut(s)	1012
EcoRII	CCWGG	3 cut(s)	338, 498, 882
EcoT14I	CCWWGG	1 cut(s)	406
EcoT38I	GRGCYC	4 cut(s)	164, 513, 852, 1368
ErhI	CCWWGG	1 cut(s)	406
Esp3I	CGTCTC	2 cut(s)	196, 250
FaeI	CATG	3 cut(s)	242, 862, 1372
FaiI	YATR	8 cut(s)	207, 240, 377, 860, 1227, 1370, 1421, 1463
FaqI	GGGAC	5 cut(s)	272, 398, 827, 1006, 1126
FatI	CATG	3 cut(s)	238, 858, 1368
FauI	CCCGC	2 cut(s)	52, 68
FbaI	TGATCA	1 cut(s)	478
FblI	GTMKAC	1 cut(s)	765
FokI	GGATG	4 cut(s)	455, 681, 899, 923
FriOI	GRGCYC	4 cut(s)	164, 513, 852, 1368
GlaI	GCGC	9 cut(s)	97, 148, 169, 345, 395, 421, 781, 837, 1188
GsaI	CCCAGC	2 cut(s)	199, 391
GsuI	CTGGAG	2 cut(s)	124, 351
HaeII	RGCGCY	1 cut(s)	347
HgaI	GACGC	2 cut(s)	121, 400
HhaI	GCGC	9 cut(s)	98, 149, 170, 346, 396, 422, 782, 838, 1189
Hin1I	GRCGYC	3 cut(s)	132, 411, 995
Hin1II	CATG	3 cut(s)	242, 862, 1372
Hin6I	GCGC	9 cut(s)	96, 147, 168, 344, 394, 420, 780, 836, 1187
HinP1I	GCGC	9 cut(s)	96, 147, 168, 344, 394, 420, 780, 836, 1187
HincII	GTYRAC	3 cut(s)	253, 766, 1452
HindII	GTYRAC	3 cut(s)	253, 766, 1452
HinfI	GANTC	9 cut(s)	78, 110, 660, 684, 724, 890, 1058, 1100, 1346
HphI	GGTGA	7 cut(s)	15, 49, 340, 346, 560, 721, 1105
Hpy166II	GTNNAC	8 cut(s)	118, 253, 274, 634, 766, 1147, 1209, 1452
Hpy188I	TCNGA	6 cut(s)	109, 217, 430, 665, 1083, 1345
Hpy188III	TCNNGA	5 cut(s)	225, 514, 913, 1033, 1350
Hpy8I	GTNNAC	8 cut(s)	118, 253, 274, 634, 766, 1147, 1209, 1452
Hpy99I	CGWCG	8 cut(s)	137, 191, 509, 752, 767, 770, 797, 1000
HpyAV	CCTTC	3 cut(s)	505, 596, 1225
HpyCH4III	ACNGT	2 cut(s)	572, 1079
HpyCH4IV	ACGT	7 cut(s)	186, 747, 900, 995, 1143, 1211, 1468
HpyCH4V	TGCA	3 cut(s)	4, 379, 1201
HpyF3I	CTNAG	2 cut(s)	646, 706
HpySE526I	ACGT	7 cut(s)	186, 747, 900, 995, 1143, 1211, 1468
Hsp92I	GRCGYC	3 cut(s)	132, 411, 995
Hsp92II	CATG	3 cut(s)	242, 862, 1372
HspAI	GCGC	9 cut(s)	96, 147, 168, 344, 394, 420, 780, 836, 1187
Kpn2I	TCCGGA	3 cut(s)	224, 1032, 1349
KroI	GCCGGC	1 cut(s)	440
KroNI	GCCGGC	1 cut(s)	442
Ksp22I	TGATCA	1 cut(s)	478
LmnI	GCTCC	7 cut(s)	110, 143, 167, 376, 389, 630, 928
Lsp1109I	GCAGC	2 cut(s)	378, 833
LweI	GCATC	4 cut(s)	703, 906, 978, 1166
MaeII	ACGT	7 cut(s)	186, 747, 900, 995, 1143, 1211, 1468
MaeIII	GTNAC	3 cut(s)	901, 1464, 1471
MbiI	CCGCTC	1 cut(s)	105
MboII	GAAGA	6 cut(s)	5, 312, 317, 967, 1063, 1253
MflI	RGATCY	3 cut(s)	864, 879, 1340
MhlI	GDGCHC	5 cut(s)	164, 513, 852, 1180, 1368
MluCI	AATT	9 cut(s)	482, 564, 574, 1228, 1262, 1393, 1400, 1416, 1483
MlyI	GAGTC	7 cut(s)	72, 104, 669, 693, 718, 884, 1067
MmeI	TCCRAC	2 cut(s)	132, 240
MroI	TCCGGA	3 cut(s)	224, 1032, 1349
MroNI	GCCGGC	1 cut(s)	440
MroXI	GAANNNNTTC	1 cut(s)	1124
MseI	TTAA	3 cut(s)	90, 1220, 1328
MspA1I	CMGCKG	2 cut(s)	233, 391
MspCI	CTTAAG	1 cut(s)	1219
MspR9I	CCNGG	9 cut(s)	340, 417, 500, 629, 657, 812, 884, 925, 926
Mva1269I	GAATGC	1 cut(s)	47
MvaI	CCWGG	3 cut(s)	340, 500, 884
MvnI	CGCG	9 cut(s)	147, 396, 422, 782, 836, 838, 1028, 1063, 1187
NaeI	GCCGGC	1 cut(s)	442
NciI	CCSGG	6 cut(s)	417, 629, 657, 812, 925, 926
NgoMIV	GCCGGC	1 cut(s)	440
NlaIII	CATG	3 cut(s)	242, 862, 1372
NlaIV	GGNNCC	7 cut(s)	139, 229, 385, 881, 930, 1076, 1366
NmeAIII	GCCGAG	4 cut(s)	534, 717, 811, 871
NmuCI	GTSAC	2 cut(s)	901, 1464
NotI	GCGGCCGC	1 cut(s)	1064
NspV	TTCGAA	2 cut(s)	486, 1103
PaeR7I	CTCGAG	1 cut(s)	892
PasI	CCCWGGG	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	5 cut(s)	300, 744, 953, 1025, 1149
PctI	GAATGC	1 cut(s)	47
PdiI	GCCGGC	1 cut(s)	442
PdmI	GAANNNNTTC	1 cut(s)	1124
PfeI	GAWTC	2 cut(s)	1100, 1346
Pfl23II	CGTACG	1 cut(s)	944
PflFI	GACNNNGTC	2 cut(s)	113, 239
PfoI	TCCNGGA	2 cut(s)	810, 882
Ple19I	CGATCG	1 cut(s)	526
PleI	GAGTC	7 cut(s)	72, 104, 668, 692, 718, 884, 1066
PmaCI	CACGTG	1 cut(s)	1469
PmlI	CACGTG	1 cut(s)	1469
PpsI	GAGTC	7 cut(s)	72, 104, 668, 692, 718, 884, 1066
Ppu21I	YACGTR	2 cut(s)	1144, 1469
PpuMI	RGGWCCY	1 cut(s)	1012
Psp124BI	GAGCTC	3 cut(s)	164, 513, 852
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	3 cut(s)	338, 498, 882
PspCI	CACGTG	1 cut(s)	1469
PspFI	CCCAGC	2 cut(s)	195, 387
PspGI	CCWGG	3 cut(s)	338, 498, 882
PspLI	CGTACG	1 cut(s)	944
PspN4I	GGNNCC	7 cut(s)	139, 229, 385, 881, 930, 1076, 1366
PspOMI	GGGCCC	1 cut(s)	1364
PspPI	GGNCC	7 cut(s)	274, 631, 922, 949, 1012, 1364, 1365
PspPPI	RGGWCCY	1 cut(s)	1012
PspXI	VCTCGAGB	1 cut(s)	892
PsuI	RGATCY	3 cut(s)	864, 879, 1340
PsyI	GACNNNGTC	2 cut(s)	113, 239
PvuI	CGATCG	1 cut(s)	526
PvuII	CAGCTG	1 cut(s)	391
RsaI	GTAC	5 cut(s)	425, 452, 674, 946, 1133
RsaNI	GTAC	5 cut(s)	424, 451, 673, 945, 1132
Rsr2I	CGGWCCG	1 cut(s)	949
RsrII	CGGWCCG	1 cut(s)	949
SacI	GAGCTC	3 cut(s)	164, 513, 852
SalI	GTCGAC	1 cut(s)	764
SaqAI	TTAA	3 cut(s)	90, 1220, 1328
Sau96I	GGNCC	7 cut(s)	274, 631, 922, 949, 1012, 1364, 1365
ScaI	AGTACT	1 cut(s)	674
SchI	GAGTC	7 cut(s)	72, 104, 669, 693, 718, 884, 1067
ScrFI	CCNGG	9 cut(s)	340, 417, 500, 629, 657, 812, 884, 925, 926
SduI	GDGCHC	5 cut(s)	164, 513, 852, 1180, 1368
SfaNI	GCATC	4 cut(s)	703, 906, 978, 1166
Sfr274I	CTCGAG	1 cut(s)	892
SfuI	TTCGAA	2 cut(s)	486, 1103
SgrDI	CGTCGACG	1 cut(s)	764
SinI	GGWCC	4 cut(s)	274, 631, 949, 1012
SlaI	CTCGAG	1 cut(s)	892
SmaI	CCCGGG	1 cut(s)	926
SmlI	CTYRAG	2 cut(s)	892, 1219
SmoI	CTYRAG	2 cut(s)	892, 1219
Sse9I	AATT	9 cut(s)	482, 564, 574, 1228, 1262, 1393, 1400, 1416, 1483
SspI	AATATT	1 cut(s)	1332
SstI	GAGCTC	3 cut(s)	164, 513, 852
StyD4I	CCNGG	9 cut(s)	338, 415, 498, 627, 655, 810, 882, 923, 924
StyI	CCWWGG	1 cut(s)	406
TaaI	ACNGT	2 cut(s)	572, 1079
TaiI	ACGT	7 cut(s)	189, 750, 903, 998, 1146, 1214, 1471
TaqII	GACCGA	1 cut(s)	238
TasI	AATT	9 cut(s)	482, 564, 574, 1228, 1262, 1393, 1400, 1416, 1483
TatI	WGTACW	1 cut(s)	672
TauI	GCSGC	9 cut(s)	328, 437, 440, 561, 785, 800, 845, 1066, 1069
TfiI	GAWTC	2 cut(s)	1100, 1346
Tru1I	TTAA	3 cut(s)	90, 1220, 1328
Tru9I	TTAA	3 cut(s)	90, 1220, 1328
TscAI	CASTG	1 cut(s)	644
TseFI	GTSAC	2 cut(s)	901, 1464
TseI	GCWGC	2 cut(s)	391, 821
Tsp45I	GTSAC	2 cut(s)	901, 1464
TspGWI	ACGGA	3 cut(s)	103, 259, 962
TspMI	CCCGGG	1 cut(s)	924
TspRI	CASTG	1 cut(s)	644
Tth111I	GACNNNGTC	2 cut(s)	113, 239
Vha464I	CTTAAG	1 cut(s)	1219
VpaK11BI	GGWCC	4 cut(s)	274, 631, 949, 1012
XagI	CCTNNNNNAGG	1 cut(s)	1219
XapI	RAATTY	2 cut(s)	1262, 1400
XhoI	CTCGAG	1 cut(s)	892
XmaI	CCCGGG	1 cut(s)	924
XmiI	GTMKAC	1 cut(s)	765
XmnI	GAANNNNTTC	1 cut(s)	1124
ZraI	GACGTC	1 cut(s)	996
ZrmI	AGTACT	1 cut(s)	674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.