Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0005093

Physical Location & Seq

Genomic Coordinates Reverse (-)

15249640 .. 15250935

Gene Structure 1296 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1157600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGCAGGCTCTTCTTCCACCCTCACCTAACTACCTCACAAAACCCGCCCTCCGCCTCCCCCGGGTCGCCCCACCCCGCCTCGCCGTCTTCAAATGCGCCTACCGCTCCGACTCCGTCCACTTCCCCAACAGCGTCGGCTCCAGCCGCGCTGACTGGCAGAGCTCCTGCGCCATTCTTGCCAGCAACGTCGTTTCCCAGCAGCCCCAGCCGCCATCTGACAAATCGAGAACCACTGACCATGTCGGCTCGGTCAACGGCCACAAGACCTCCGTTGACCTCGAGATTGTCCCCATGGAGAAGCTCTCCTCCTCGTCGTCATCCCCGGACGACAAGTCGTCTTCTCCGCCTCCCAGGGCGCTCACAATCACCGACCTCTCTCCGGCTCCGATGCACGGAGCCCAGCTGCGTGTCGCCTACCAAGGCGTCCCCGGGGCGTACTCCGAAGCCGCCGCTGGAAAAGCCTACCCGAAATGCGAGGCCATCCCCTGTGACCAATTCGAAGTCGCCTTCCAAGCGGTCGAGCTCTGGATCGCCGATCGAGCAGTCCTCCCAGTTGAAAACTCCCTTGGCGGCTCAATTCATCGCAATTACGATCTCCTCCTCCGCCACCGCCTCCACATCGTCGGAGAAGTCCAGCTTCCGGTCCACCACTGCCTCCTAGCCCTCCCCGGAGTCCGGAAAGAGTACTTGAACCGAGTCATCTCGCATCCTCAAGCCTTGGCTCAGTGCGAGCTGACTCTCACCAAACTCGGCCTCAACGTCGTTCGCGAAGCCGTCGACGACACCGCCGGCGCAGCCGAATTCGTCGCCGCCAACAACCTCCGCGACACGGCGGCCATCGCTTCGGCACGCGCCGCCGAACTCTACGGCATGGAGATCTTGGAGAACGGGATCCAGGACGACTCGAGCAACGTGACCCGGTTCGTGATGCTGGCCCGGGAGCCGATCATTCCCCGCACGGACCGGCCGTTCAAGACGAGCATCGTCTTCGCGCACGACAAGGGGACATCGGTGCTGTTCAAGGTCCTCTCGGCGTTCGCCTTCCGGAACATCAGCCTGACAAAGATCGAGTCGCGGCCGCACCGGAACCGTCCGATCAGGCTGGTGAGCGATTCGAACGAAGGAACGGCGAGTCACTTCGAGTACCTGTTCTACGTGGACTTCGAGGCGTCGATGGCGGAGGTTAGGGCACAGAACGCGCTGGCGGAGGTTCAGGAGTTCACGTCGTTCTTGAGGGTGCTGGGAAGCTACCCCATTGATATGACTCCTTGGAGTCCATCCAGGGGGGGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009987 GO:0010244 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0017144 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0047769 GO:0050896 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902221 GO:1902223

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PDT

Protein Analysis

432

Amino Acids

47.1

Weight (kDa)

6.68

Isoelectric Point (pI)

43.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDT	PF00800	137 - 314	7.1e-59	Prephenate dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08250 AT2G27820 AT3G44720 AT5G22630
fragaria_vesca	FvH4_3g29870
malus_domestica	MD03G1134800.v1.1 MD11G1157600.v1.1
prunus_persica	Prupe.6G119200_v2.0.a1
pyrus_communis	pycom03g09080 pycom11g12770
rosa_chinensis	RchiOBHm_Chr5g0055201 RchiOBHm_Chr7g0203231
rosa_laevigata	RLG00000034973
rosa_multiflora	Rmu_sc0000994.1_g000007 Rmu_sc0010754.1_g000003 Rmu_sc0011582.1_g000002 Rmu_sc0018729.1_g000008
rosa_roxburghii	Rroxscaffold_1G00025130
rosa_rugosa	Rorug05G0291700 Rorug07G0075300.1
rosa_samantha	Rh5AG361500 Rh5BG372900 Rh5CG394800 Rh5DG386300 Rh7AG204600 Rh7BG203800 Rh7CG215600 Rh7DG211200
rosa_wichuraiana	Rw5G033990 Rw7G017810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	105
AccI	GTMKAC	1 cut(s)	777
AccII	CGCG	7 cut(s)	147, 768, 825, 852, 992, 1075, 1199
AccIII	TCCGGA	2 cut(s)	675, 1044
AclWI	GGATC	3 cut(s)	536, 886, 899
AcoI	YGGCCR	4 cut(s)	256, 834, 965, 1076
AcsI	RAATTY	1 cut(s)	800
AcyI	GRCGYC	2 cut(s)	423, 1169
AfaI	GTAC	3 cut(s)	437, 686, 1145
AfiI	CCNNNNNNNGG	7 cut(s)	61, 379, 392, 640, 675, 829, 1283
AgsI	TTSAA	5 cut(s)	91, 557, 691, 973, 1021
AhdI	GACNNNNNGTC	2 cut(s)	331, 334
AjiI	CACGTC	1 cut(s)	1224
AjnI	CCWGG	3 cut(s)	350, 894, 1280
AjuI	GAANNNNNNNTTGG	2 cut(s)	549, 581
AloI	GAACNNNNNNTCC	2 cut(s)	953, 985
AluBI	AGCT	7 cut(s)	162, 301, 403, 523, 637, 733, 1248
AluI	AGCT	7 cut(s)	162, 301, 403, 523, 637, 733, 1248
Alw21I	GWGCWC	2 cut(s)	164, 525
AlwI	GGATC	3 cut(s)	536, 886, 899
Ama87I	CYCGRG	5 cut(s)	60, 278, 428, 904, 936
Aor13HI	TCCGGA	2 cut(s)	675, 1044
AoxI	GGCC	7 cut(s)	256, 477, 751, 834, 933, 965, 1076
ApeKI	GCWGC	3 cut(s)	199, 403, 794
ApoI	RAATTY	1 cut(s)	800
ArsI	GACNNNNNNTTYG	2 cut(s)	1055, 1087
AspLEI	GCGC	8 cut(s)	98, 149, 170, 358, 794, 854, 994, 1201
AspS9I	GGNCC	4 cut(s)	643, 934, 961, 1024
AsuC2I	CCSGG	9 cut(s)	61, 62, 323, 429, 430, 669, 919, 937, 938
AsuHPI	GGTGA	4 cut(s)	15, 358, 733, 1117
AsuII	TTCGAA	2 cut(s)	498, 1115
AvaI	CYCGRG	5 cut(s)	60, 278, 428, 904, 936
AvaII	GGWCC	3 cut(s)	643, 961, 1024
BaeGI	GKGCMC	1 cut(s)	1192
BamHI	GGATCC	1 cut(s)	891
BanII	GRGCYC	3 cut(s)	164, 400, 525
BbsI	GAAGAC	3 cut(s)	79, 330, 979
Bbv12I	GWGCWC	2 cut(s)	164, 525
BbvI	GCAGC	3 cut(s)	211, 390, 806
BccI	CCATC	5 cut(s)	220, 488, 845, 1168, 1285
BceAI	ACGGC	7 cut(s)	68, 271, 758, 846, 883, 952, 1143
BcgI	CGANNNNNNTGC	2 cut(s)	970, 1004
BciT130I	CCWGG	3 cut(s)	352, 896, 1282
BcnI	CCSGG	9 cut(s)	61, 62, 323, 429, 430, 669, 919, 937, 938
BfaI	CTAG	1 cut(s)	659
BfoI	RGCGCY	1 cut(s)	359
BglII	AGATCT	1 cut(s)	876
BmcAI	AGTACT	1 cut(s)	686
Bme18I	GGWCC	3 cut(s)	643, 961, 1024
BmeRI	GACNNNNNGTC	2 cut(s)	331, 334
BmeT110I	CYCGRG	5 cut(s)	60, 278, 428, 904, 936
BmgBI	CACGTC	1 cut(s)	1224
BmgT120I	GGNCC	4 cut(s)	643, 934, 961, 1024
BmiI	GGNNCC	6 cut(s)	139, 384, 397, 893, 942, 1088
BmrI	ACTGGG	1 cut(s)	545
BmsI	GCATC	4 cut(s)	378, 715, 918, 990
BmuI	ACTGGG	1 cut(s)	545
BpiI	GAAGAC	3 cut(s)	79, 330, 979
BplI	GAGNNNNNCTC	4 cut(s)	287, 319, 531, 563
BpmI	CTGGAG	1 cut(s)	124
Bpu14I	TTCGAA	2 cut(s)	498, 1115
BpuEI	CTTGAG	2 cut(s)	696, 1252
BpuMI	CCSGG	9 cut(s)	61, 62, 323, 429, 430, 669, 919, 937, 938
BsaAI	YACGTR	1 cut(s)	1156
BsaHI	GRCGYC	2 cut(s)	423, 1169
BsaWI	WCCGGW	4 cut(s)	640, 675, 1044, 1083
BsaXI	ACNNNNNCTCC	6 cut(s)	33, 63, 251, 281, 1208, 1238
Bsc4I	CCNNNNNNNGG	7 cut(s)	61, 379, 392, 640, 675, 829, 1283
Bse118I	RCCGGY	2 cut(s)	788, 963
Bse1I	ACTGG	2 cut(s)	158, 551
BseAI	TCCGGA	2 cut(s)	675, 1044
BseBI	CCWGG	3 cut(s)	352, 896, 1282
BseGI	GGATG	4 cut(s)	317, 480, 706, 1277
BseLI	CCNNNNNNNGG	7 cut(s)	61, 379, 392, 640, 675, 829, 1283
BseMII	CTCAG	1 cut(s)	737
BseNI	ACTGG	2 cut(s)	158, 551
BseRI	GAGGAG	4 cut(s)	295, 298, 587, 590
BseSI	GKGCMC	1 cut(s)	1192
BseX3I	CGGCCG	2 cut(s)	965, 1076
BseXI	GCAGC	3 cut(s)	211, 390, 806
BseYI	CCCAGC	4 cut(s)	195, 204, 399, 1240
Bsh1236I	CGCG	7 cut(s)	147, 768, 825, 852, 992, 1075, 1199
Bsh1285I	CGRYCG	4 cut(s)	519, 538, 968, 1079
BshFI	GGCC	7 cut(s)	258, 479, 753, 836, 935, 967, 1078
BsiEI	CGRYCG	4 cut(s)	519, 538, 968, 1079
BsiHKAI	GWGCWC	2 cut(s)	164, 525
BsiHKCI	CYCGRG	5 cut(s)	60, 278, 428, 904, 936
BslFI	GGGAC	3 cut(s)	272, 410, 1018
BslI	CCNNNNNNNGG	7 cut(s)	61, 379, 392, 640, 675, 829, 1283
BsmFI	GGGAC	3 cut(s)	272, 410, 1018
BsnI	GGCC	7 cut(s)	258, 479, 753, 836, 935, 967, 1078
BsoBI	CYCGRG	5 cut(s)	60, 278, 428, 904, 936
Bsp119I	TTCGAA	2 cut(s)	498, 1115
Bsp1286I	GDGCHC	4 cut(s)	164, 400, 525, 1192
Bsp13I	TCCGGA	2 cut(s)	675, 1044
Bsp143I	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
Bsp19I	CCATGG	1 cut(s)	291
Bsp68I	TCGCGA	1 cut(s)	768
BspANI	GGCC	7 cut(s)	258, 479, 753, 836, 935, 967, 1078
BspCNI	CTCAG	1 cut(s)	736
BspEI	TCCGGA	2 cut(s)	675, 1044
BspFNI	CGCG	7 cut(s)	147, 768, 825, 852, 992, 1075, 1199
BspLI	GGNNCC	6 cut(s)	139, 384, 397, 893, 942, 1088
BspPI	GGATC	3 cut(s)	536, 886, 899
BspQI	GCTCTTC	1 cut(s)	15
BspT104I	TTCGAA	2 cut(s)	498, 1115
BsrBI	CCGCTC	1 cut(s)	105
BsrFI	RCCGGY	2 cut(s)	788, 963
BsrI	ACTGG	2 cut(s)	158, 551
BssAI	RCCGGY	2 cut(s)	788, 963
BssMI	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
BssNI	GRCGYC	2 cut(s)	423, 1169
BssT1I	CCWWGG	5 cut(s)	291, 418, 565, 717, 1268
Bst2UI	CCWGG	3 cut(s)	352, 896, 1282
Bst4CI	ACNGT	1 cut(s)	1091
Bst6I	CTCTTC	1 cut(s)	15
BstACI	GRCGYC	2 cut(s)	423, 1169
BstBAI	YACGTR	1 cut(s)	1156
BstBI	TTCGAA	2 cut(s)	498, 1115
BstC8I	GCNNGC	7 cut(s)	6, 181, 731, 790, 850, 933, 1203
BstDEI	CTNAG	1 cut(s)	723
BstDSI	CCRYGG	1 cut(s)	291
BstF5I	GGATG	4 cut(s)	317, 480, 706, 1277
BstFNI	CGCG	7 cut(s)	147, 768, 825, 852, 992, 1075, 1199
BstH2I	RGCGCY	1 cut(s)	359
BstHHI	GCGC	8 cut(s)	98, 149, 170, 358, 794, 854, 994, 1201
BstKTI	GATC	8 cut(s)	531, 538, 595, 879, 894, 948, 1068, 1098
BstMBI	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
BstMCI	CGRYCG	4 cut(s)	519, 538, 968, 1079
BstNI	CCWGG	3 cut(s)	352, 896, 1282
BstSLI	GKGCMC	1 cut(s)	1192
BstUI	CGCG	7 cut(s)	147, 768, 825, 852, 992, 1075, 1199
BstV1I	GCAGC	3 cut(s)	211, 390, 806
BstV2I	GAAGAC	3 cut(s)	79, 330, 979
BstX2I	RGATCY	2 cut(s)	876, 891
BstYI	RGATCY	2 cut(s)	876, 891
BstZI	CGGCCG	2 cut(s)	965, 1076
BsuRI	GGCC	7 cut(s)	258, 479, 753, 836, 935, 967, 1078
BtgI	CCRYGG	1 cut(s)	291
BtgZI	GCGATG	2 cut(s)	566, 823
BtrI	CACGTC	1 cut(s)	1224
BtsCI	GGATG	4 cut(s)	317, 480, 706, 1277
BtsI	GCAGTG	1 cut(s)	649
BtsIMutI	CAGTG	3 cut(s)	231, 649, 731
BtuMI	TCGCGA	1 cut(s)	768
Cac8I	GCNNGC	7 cut(s)	6, 181, 731, 790, 850, 933, 1203
CciNI	GCGGCCGC	1 cut(s)	1076
CfoI	GCGC	8 cut(s)	98, 149, 170, 358, 794, 854, 994, 1201
Cfr10I	RCCGGY	2 cut(s)	788, 963
Cfr13I	GGNCC	4 cut(s)	643, 934, 961, 1024
Cfr9I	CCCGGG	3 cut(s)	60, 428, 936
CpoI	CGGWCCG	1 cut(s)	961
CseI	GACGC	3 cut(s)	121, 412, 1158
Csp6I	GTAC	3 cut(s)	436, 685, 1144
CspI	CGGWCCG	1 cut(s)	961
CviAII	CATG	3 cut(s)	239, 292, 871
CviQI	GTAC	3 cut(s)	436, 685, 1144
DdeI	CTNAG	1 cut(s)	723
DpnI	GATC	8 cut(s)	530, 537, 594, 878, 893, 947, 1067, 1097
DpnII	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
DriI	GACNNNNNGTC	2 cut(s)	331, 334
EaeI	YGGCCR	4 cut(s)	256, 834, 965, 1076
EagI	CGGCCG	2 cut(s)	965, 1076
Eam1104I	CTCTTC	1 cut(s)	15
Eam1105I	GACNNNNNGTC	2 cut(s)	331, 334
EarI	CTCTTC	1 cut(s)	15
EciI	GGCGGA	5 cut(s)	41, 333, 593, 1193, 1220
Ecl136II	GAGCTC	2 cut(s)	162, 523
EclXI	CGGCCG	2 cut(s)	965, 1076
Eco130I	CCWWGG	5 cut(s)	291, 418, 565, 717, 1268
Eco24I	GRGCYC	3 cut(s)	164, 400, 525
Eco47I	GGWCC	3 cut(s)	643, 961, 1024
Eco52I	CGGCCG	2 cut(s)	965, 1076
Eco53kI	GAGCTC	2 cut(s)	162, 523
Eco88I	CYCGRG	5 cut(s)	60, 278, 428, 904, 936
EcoICRI	GAGCTC	2 cut(s)	162, 523
EcoO109I	RGGNCCY	1 cut(s)	1024
EcoRI	GAATTC	1 cut(s)	800
EcoRII	CCWGG	3 cut(s)	350, 894, 1280
EcoT14I	CCWWGG	5 cut(s)	291, 418, 565, 717, 1268
EcoT38I	GRGCYC	3 cut(s)	164, 400, 525
ErhI	CCWWGG	5 cut(s)	291, 418, 565, 717, 1268
FaeI	CATG	3 cut(s)	242, 295, 874
FaiI	YATR	4 cut(s)	240, 293, 872, 1262
FalI	AAGNNNNNCTT	2 cut(s)	621, 653
FaqI	GGGAC	3 cut(s)	272, 410, 1018
FatI	CATG	3 cut(s)	238, 291, 870
FauI	CCCGC	3 cut(s)	52, 83, 962
FblI	GTMKAC	1 cut(s)	777
FokI	GGATG	4 cut(s)	304, 467, 693, 1264
FriOI	GRGCYC	3 cut(s)	164, 400, 525
FspBI	CTAG	1 cut(s)	659
GlaI	GCGC	8 cut(s)	97, 148, 169, 357, 793, 853, 993, 1200
GsaI	CCCAGC	4 cut(s)	199, 208, 403, 1244
GsuI	CTGGAG	1 cut(s)	124
HaeII	RGCGCY	1 cut(s)	359
HaeIII	GGCC	7 cut(s)	258, 479, 753, 836, 935, 967, 1078
HgaI	GACGC	3 cut(s)	121, 412, 1158
HhaI	GCGC	8 cut(s)	98, 149, 170, 358, 794, 854, 994, 1201
Hin1I	GRCGYC	2 cut(s)	423, 1169
Hin1II	CATG	3 cut(s)	242, 295, 874
Hin6I	GCGC	8 cut(s)	96, 147, 168, 356, 792, 852, 992, 1199
HinP1I	GCGC	8 cut(s)	96, 147, 168, 356, 792, 852, 992, 1199
HincII	GTYRAC	3 cut(s)	253, 274, 778
HindII	GTYRAC	3 cut(s)	253, 274, 778
HphI	GGTGA	4 cut(s)	15, 358, 733, 1117
Hpy166II	GTNNAC	7 cut(s)	118, 253, 274, 646, 778, 1159, 1221
Hpy188I	TCNGA	6 cut(s)	109, 217, 387, 442, 626, 1095
Hpy8I	GTNNAC	7 cut(s)	118, 253, 274, 646, 778, 1159, 1221
HpyAV	CCTTC	3 cut(s)	517, 1051, 1115
HpyCH4III	ACNGT	1 cut(s)	1091
HpyCH4IV	ACGT	5 cut(s)	186, 759, 912, 1155, 1223
HpyCH4V	TGCA	2 cut(s)	4, 391
HpyF3I	CTNAG	1 cut(s)	723
HpySE526I	ACGT	5 cut(s)	186, 759, 912, 1155, 1223
Hsp92I	GRCGYC	2 cut(s)	423, 1169
Hsp92II	CATG	3 cut(s)	242, 295, 874
HspAI	GCGC	8 cut(s)	96, 147, 168, 356, 792, 852, 992, 1199
Kpn2I	TCCGGA	2 cut(s)	675, 1044
KroI	GCCGGC	1 cut(s)	788
KroNI	GCCGGC	1 cut(s)	790
Kzo9I	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
LguI	GCTCTTC	1 cut(s)	15
LmnI	GCTCC	6 cut(s)	110, 143, 167, 388, 395, 940
Lsp1109I	GCAGC	3 cut(s)	211, 390, 806
LweI	GCATC	4 cut(s)	378, 715, 918, 990
MaeI	CTAG	1 cut(s)	659
MaeII	ACGT	5 cut(s)	186, 759, 912, 1155, 1223
MaeIII	GTNAC	3 cut(s)	488, 913, 1133
MalI	GATC	8 cut(s)	530, 537, 594, 878, 893, 947, 1067, 1097
MbiI	CCGCTC	1 cut(s)	105
MboI	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
MboII	GAAGA	4 cut(s)	5, 79, 330, 979
MflI	RGATCY	2 cut(s)	876, 891
MhlI	GDGCHC	4 cut(s)	164, 400, 525, 1192
MluCI	AATT	4 cut(s)	494, 576, 586, 800
MlyI	GAGTC	9 cut(s)	104, 681, 705, 730, 896, 1079, 1141, 1258, 1282
MmeI	TCCRAC	2 cut(s)	132, 604
MreI	CGCCGGCG	1 cut(s)	788
MroI	TCCGGA	2 cut(s)	675, 1044
MroNI	GCCGGC	1 cut(s)	788
MslI	CAYNNNNRTG	1 cut(s)	1259
MspA1I	CMGCKG	2 cut(s)	403, 452
MvaI	CCWGG	3 cut(s)	352, 896, 1282
MvnI	CGCG	7 cut(s)	147, 768, 825, 852, 992, 1075, 1199
NaeI	GCCGGC	1 cut(s)	790
NciI	CCSGG	9 cut(s)	61, 62, 323, 429, 430, 669, 919, 937, 938
NcoI	CCATGG	1 cut(s)	291
NdeII	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
NgoMIV	GCCGGC	1 cut(s)	788
NlaIII	CATG	3 cut(s)	242, 295, 874
NlaIV	GGNNCC	6 cut(s)	139, 384, 397, 893, 942, 1088
NmeAIII	GCCGAG	2 cut(s)	729, 1010
NmuCI	GTSAC	3 cut(s)	488, 913, 1133
NotI	GCGGCCGC	1 cut(s)	1076
NruI	TCGCGA	1 cut(s)	768
NspV	TTCGAA	2 cut(s)	498, 1115
PaeR7I	CTCGAG	2 cut(s)	278, 904
PasI	CCCWGGG	1 cut(s)	351
PciSI	GCTCTTC	1 cut(s)	15
PcsI	WCGNNNNNNNCGW	4 cut(s)	756, 765, 965, 1161
PdiI	GCCGGC	1 cut(s)	790
PfeI	GAWTC	1 cut(s)	1112
PflFI	GACNNNGTC	2 cut(s)	113, 239
PfoI	TCCNGGA	1 cut(s)	894
Ple19I	CGATCG	1 cut(s)	538
PleI	GAGTC	9 cut(s)	104, 680, 704, 730, 896, 1078, 1140, 1258, 1281
PpsI	GAGTC	9 cut(s)	104, 680, 704, 730, 896, 1078, 1140, 1258, 1281
Ppu21I	YACGTR	1 cut(s)	1156
PpuMI	RGGWCCY	1 cut(s)	1024
Psp124BI	GAGCTC	2 cut(s)	164, 525
Psp5II	RGGWCCY	1 cut(s)	1024
Psp6I	CCWGG	3 cut(s)	350, 894, 1280
PspFI	CCCAGC	4 cut(s)	195, 204, 399, 1240
PspGI	CCWGG	3 cut(s)	350, 894, 1280
PspN4I	GGNNCC	6 cut(s)	139, 384, 397, 893, 942, 1088
PspPI	GGNCC	4 cut(s)	643, 934, 961, 1024
PspPPI	RGGWCCY	1 cut(s)	1024
PspXI	VCTCGAGB	1 cut(s)	904
PsuI	RGATCY	2 cut(s)	876, 891
PsyI	GACNNNGTC	2 cut(s)	113, 239
PvuI	CGATCG	1 cut(s)	538
PvuII	CAGCTG	1 cut(s)	403
RruI	TCGCGA	1 cut(s)	768
RsaI	GTAC	3 cut(s)	437, 686, 1145
RsaNI	GTAC	3 cut(s)	436, 685, 1144
RseI	CAYNNNNRTG	1 cut(s)	1259
Rsr2I	CGGWCCG	1 cut(s)	961
RsrII	CGGWCCG	1 cut(s)	961
SacI	GAGCTC	2 cut(s)	164, 525
SalI	GTCGAC	1 cut(s)	776
SapI	GCTCTTC	1 cut(s)	15
Sau3AI	GATC	8 cut(s)	528, 535, 592, 876, 891, 945, 1065, 1095
Sau96I	GGNCC	4 cut(s)	643, 934, 961, 1024
ScaI	AGTACT	1 cut(s)	686
SchI	GAGTC	9 cut(s)	104, 681, 705, 730, 896, 1079, 1141, 1258, 1282
SduI	GDGCHC	4 cut(s)	164, 400, 525, 1192
SfaNI	GCATC	4 cut(s)	378, 715, 918, 990
Sfr274I	CTCGAG	2 cut(s)	278, 904
SfuI	TTCGAA	2 cut(s)	498, 1115
SgrAI	CRCCGGYG	1 cut(s)	788
SgrDI	CGTCGACG	1 cut(s)	776
SinI	GGWCC	3 cut(s)	643, 961, 1024
SlaI	CTCGAG	2 cut(s)	278, 904
SmaI	CCCGGG	3 cut(s)	62, 430, 938
SmiMI	CAYNNNNRTG	1 cut(s)	1259
SmlI	CTYRAG	4 cut(s)	278, 711, 904, 1231
SmoI	CTYRAG	4 cut(s)	278, 711, 904, 1231
Sse9I	AATT	4 cut(s)	494, 576, 586, 800
SspMI	CTAG	1 cut(s)	659
SstI	GAGCTC	2 cut(s)	164, 525
StyI	CCWWGG	5 cut(s)	291, 418, 565, 717, 1268
TaaI	ACNGT	1 cut(s)	1091
TaiI	ACGT	5 cut(s)	189, 762, 915, 1158, 1226
TaqII	GACCGA	1 cut(s)	238
TasI	AATT	4 cut(s)	494, 576, 586, 800
TatI	WGTACW	1 cut(s)	684
TfiI	GAWTC	1 cut(s)	1112
TscAI	CASTG	3 cut(s)	238, 656, 731
TseFI	GTSAC	3 cut(s)	488, 913, 1133
TseI	GCWGC	3 cut(s)	199, 403, 794
Tsp45I	GTSAC	3 cut(s)	488, 913, 1133
TspDTI	ATGAA	1 cut(s)	569
TspGWI	ACGGA	4 cut(s)	103, 259, 408, 974
TspMI	CCCGGG	3 cut(s)	60, 428, 936
TspRI	CASTG	3 cut(s)	238, 656, 731
Tth111I	GACNNNGTC	2 cut(s)	113, 239
VpaK11BI	GGWCC	3 cut(s)	643, 961, 1024
XapI	RAATTY	1 cut(s)	800
XhoI	CTCGAG	2 cut(s)	278, 904
XmaI	CCCGGG	3 cut(s)	60, 428, 936
XmiI	GTMKAC	1 cut(s)	777
XspI	CTAG	1 cut(s)	659
ZrmI	AGTACT	1 cut(s)	686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.